Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008165.01.T01 | XP_013463390.2 | 78.894 | 597 | 27 | 4 | 8 | 519 | 2 | 584 | 0 | 913 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008165.01.T01 | Q9C7A2 | 20.085 | 473 | 337 | 13 | 23 | 482 | 91 | 535 | 2.07E-11 | 70.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008165.01.T01 | A0A396J5U6 | 78.894 | 597 | 27 | 4 | 8 | 519 | 2 | 584 | 0.0 | 913 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0280008165.01 | 0.836043 | 1.179066e-56 | 1.468335e-53 |
| MsG0080048838.01 | MsG0280008165.01 | 0.810873 | 9.284026e-51 | 5.661840e-48 |
| MsG0080049002.01 | MsG0280008165.01 | 0.809966 | 1.456773e-50 | 8.673477e-48 |
| MsG0180000241.01 | MsG0280008165.01 | 0.835683 | 1.455175e-56 | 1.792655e-53 |
| MsG0180000627.01 | MsG0280008165.01 | 0.825284 | 5.098835e-54 | 4.627280e-51 |
| MsG0180000652.01 | MsG0280008165.01 | 0.827332 | 1.658467e-54 | 1.596381e-51 |
| MsG0180001119.01 | MsG0280008165.01 | 0.840919 | 6.503757e-58 | 9.403722e-55 |
| MsG0180001179.01 | MsG0280008165.01 | 0.809358 | 1.968649e-50 | 1.153450e-47 |
| MsG0180001590.01 | MsG0280008165.01 | 0.808857 | 2.520647e-50 | 1.457100e-47 |
| MsG0180001591.01 | MsG0280008165.01 | 0.821542 | 3.820936e-53 | 3.117595e-50 |
| MsG0180002088.01 | MsG0280008165.01 | 0.828365 | 9.361794e-55 | 9.285476e-52 |
| MsG0180002206.01 | MsG0280008165.01 | 0.816009 | 6.894949e-52 | 4.828772e-49 |
| MsG0180002207.01 | MsG0280008165.01 | 0.823664 | 1.226533e-53 | 1.062941e-50 |
| MsG0180004164.01 | MsG0280008165.01 | 0.806905 | 6.556359e-50 | 3.601478e-47 |
| MsG0180004277.01 | MsG0280008165.01 | 0.848977 | 4.345991e-60 | 8.116646e-57 |
| MsG0180004516.01 | MsG0280008165.01 | 0.811740 | 6.017874e-51 | 3.754951e-48 |
| MsG0180004988.01 | MsG0280008165.01 | 0.840848 | 6.792197e-58 | 9.798935e-55 |
| MsG0180005625.01 | MsG0280008165.01 | 0.808415 | 3.131831e-50 | 1.789667e-47 |
| MsG0180005639.01 | MsG0280008165.01 | 0.854411 | 1.253233e-61 | 2.796245e-58 |
| MsG0180005729.01 | MsG0280008165.01 | 0.848324 | 6.590106e-60 | 1.204920e-56 |
| MsG0180005731.01 | MsG0280008165.01 | 0.850357 | 1.789399e-60 | 3.495719e-57 |
| MsG0180006054.01 | MsG0280008165.01 | 0.839298 | 1.722708e-57 | 2.368767e-54 |
| MsG0280007877.01 | MsG0280008165.01 | 0.836675 | 8.145047e-57 | 1.033738e-53 |
| MsG0280008152.01 | MsG0280008165.01 | 0.818890 | 1.548054e-52 | 1.173394e-49 |
| MsG0280008165.01 | MsG0280008171.01 | 0.966019 | 2.303052e-125 | 1.531975e-119 |
| MsG0280008165.01 | MsG0280008172.01 | 0.881809 | 1.762601e-70 | 1.047388e-66 |
| MsG0280008165.01 | MsG0280008383.01 | 0.802022 | 6.832730e-49 | 3.311675e-46 |
| MsG0280008165.01 | MsG0280009169.01 | 0.805465 | 1.317531e-49 | 6.975425e-47 |
| MsG0280008165.01 | MsG0280010675.01 | 0.801557 | 8.511914e-49 | 4.077164e-46 |
| MsG0280008165.01 | MsG0280011272.01 | -0.805927 | 1.053745e-49 | 5.645421e-47 |
| MsG0280008165.01 | MsG0280011404.01 | 0.843304 | 1.521412e-58 | 2.370562e-55 |
| MsG0280008165.01 | MsG0380012567.01 | 0.807071 | 6.046331e-50 | 3.335648e-47 |
| MsG0280008165.01 | MsG0380014464.01 | 0.835518 | 1.602095e-56 | 1.963781e-53 |
| MsG0280008165.01 | MsG0380014794.01 | 0.817819 | 2.705510e-52 | 1.991029e-49 |
| MsG0280008165.01 | MsG0380015486.01 | 0.874256 | 7.784702e-68 | 3.480647e-64 |
| MsG0280008165.01 | MsG0380016916.01 | 0.837934 | 3.877943e-57 | 5.115000e-54 |
| MsG0280008165.01 | MsG0380017329.01 | 0.833683 | 4.631369e-56 | 5.372610e-53 |
| MsG0280008165.01 | MsG0480018226.01 | 0.801808 | 7.560123e-49 | 3.644421e-46 |
| MsG0280008165.01 | MsG0480018253.01 | 0.841883 | 3.627449e-58 | 5.404545e-55 |
| MsG0280008165.01 | MsG0480019065.01 | 0.830273 | 3.223132e-55 | 3.379600e-52 |
| MsG0280008165.01 | MsG0480019083.01 | 0.807683 | 4.484005e-50 | 2.513442e-47 |
| MsG0280008165.01 | MsG0480019313.01 | 0.800611 | 1.328879e-48 | 6.214808e-46 |
| MsG0280008165.01 | MsG0480020229.01 | 0.829583 | 4.745952e-55 | 4.877945e-52 |
| MsG0280008165.01 | MsG0480020433.01 | 0.810797 | 9.642604e-51 | 5.868358e-48 |
| MsG0280008165.01 | MsG0480021763.01 | 0.803258 | 3.797788e-49 | 1.899675e-46 |
| MsG0280008165.01 | MsG0480022359.01 | 0.835778 | 1.376150e-56 | 1.700075e-53 |
| MsG0280008165.01 | MsG0480022572.01 | 0.807338 | 5.307418e-50 | 2.948514e-47 |
| MsG0280008165.01 | MsG0480022802.01 | 0.805044 | 1.613935e-49 | 8.452628e-47 |
| MsG0280008165.01 | MsG0480022978.01 | 0.832627 | 8.485012e-56 | 9.537639e-53 |
| MsG0280008165.01 | MsG0480023150.01 | 0.801054 | 1.078849e-48 | 5.102875e-46 |
| MsG0280008165.01 | MsG0480023251.01 | 0.809111 | 2.223535e-50 | 1.294190e-47 |
| MsG0280008165.01 | MsG0480023498.01 | 0.808206 | 3.470347e-50 | 1.972309e-47 |
| MsG0280008165.01 | MsG0480023905.01 | 0.833327 | 5.685315e-56 | 6.526182e-53 |
| MsG0280008165.01 | MsG0480023906.01 | 0.837939 | 3.866659e-57 | 5.100919e-54 |
| MsG0280008165.01 | MsG0580024843.01 | 0.801976 | 6.984269e-49 | 3.381008e-46 |
| MsG0280008165.01 | MsG0580024975.01 | 0.805002 | 1.646771e-49 | 8.615344e-47 |
| MsG0280008165.01 | MsG0580025226.01 | 0.845233 | 4.613966e-59 | 7.638493e-56 |
| MsG0280008165.01 | MsG0580025827.01 | 0.850574 | 1.555248e-60 | 3.059875e-57 |
| MsG0280008165.01 | MsG0580028140.01 | 0.871817 | 5.119407e-67 | 2.093384e-63 |
| MsG0280008165.01 | MsG0580028406.01 | 0.832207 | 1.078537e-55 | 1.197198e-52 |
| MsG0280008165.01 | MsG0580028428.01 | 0.830238 | 3.287270e-55 | 3.443622e-52 |
| MsG0280008165.01 | MsG0580029394.01 | 0.811873 | 5.630037e-51 | 3.525268e-48 |
| MsG0280008165.01 | MsG0580029472.01 | 0.810673 | 1.025538e-50 | 6.220848e-48 |
| MsG0280008165.01 | MsG0580029880.01 | 0.807016 | 6.209921e-50 | 3.421089e-47 |
| MsG0280008165.01 | MsG0580030000.01 | 0.805953 | 1.040544e-49 | 5.578546e-47 |
| MsG0280008165.01 | MsG0580030071.01 | 0.832559 | 8.822262e-56 | 9.896567e-53 |
| MsG0280008165.01 | MsG0680030599.01 | 0.826378 | 2.803517e-54 | 2.624860e-51 |
| MsG0280008165.01 | MsG0680031996.01 | 0.815022 | 1.143864e-51 | 7.797130e-49 |
| MsG0280008165.01 | MsG0680031998.01 | 0.860825 | 1.576196e-63 | 4.366348e-60 |
| MsG0280008165.01 | MsG0680032272.01 | 0.803362 | 3.615148e-49 | 1.813029e-46 |
| MsG0280008165.01 | MsG0680032279.01 | 0.809307 | 2.019085e-50 | 1.181316e-47 |
| MsG0280008165.01 | MsG0680033447.01 | 0.846373 | 2.261852e-59 | 3.884916e-56 |
| MsG0280008165.01 | MsG0680034032.01 | 0.803643 | 3.160788e-49 | 1.596746e-46 |
| MsG0280008165.01 | MsG0680034480.01 | 0.827447 | 1.556844e-54 | 1.503440e-51 |
| MsG0280008165.01 | MsG0680034601.01 | 0.827835 | 1.256353e-54 | 1.226899e-51 |
| MsG0280008165.01 | MsG0680034721.01 | 0.819160 | 1.343597e-52 | 1.025947e-49 |
| MsG0280008165.01 | MsG0680034769.01 | 0.812384 | 4.356525e-51 | 2.765992e-48 |
| MsG0280008165.01 | MsG0680035707.01 | 0.839188 | 1.839910e-57 | 2.521395e-54 |
| MsG0280008165.01 | MsG0780036126.01 | 0.805912 | 1.061281e-49 | 5.683688e-47 |
| MsG0280008165.01 | MsG0780036182.01 | 0.808121 | 3.618611e-50 | 2.051859e-47 |
| MsG0280008165.01 | MsG0780036509.01 | 0.883498 | 4.263020e-71 | 2.709155e-67 |
| MsG0280008165.01 | MsG0780036595.01 | 0.824239 | 8.987652e-54 | 7.915591e-51 |
| MsG0280008165.01 | MsG0780036596.01 | 0.812488 | 4.134852e-51 | 2.632593e-48 |
| MsG0280008165.01 | MsG0780037442.01 | 0.801428 | 9.047743e-49 | 4.319686e-46 |
| MsG0280008165.01 | MsG0780039323.01 | 0.825654 | 4.165670e-54 | 3.820483e-51 |
| MsG0280008165.01 | MsG0780039338.01 | 0.828067 | 1.104381e-54 | 1.085947e-51 |
| MsG0280008165.01 | MsG0780039432.01 | 0.843211 | 1.611358e-58 | 2.502886e-55 |
| MsG0280008165.01 | MsG0780039847.01 | 0.829895 | 3.985002e-55 | 4.133559e-52 |
| MsG0280008165.01 | MsG0780039934.01 | 0.803122 | 4.053313e-49 | 2.020340e-46 |
| MsG0280008165.01 | MsG0780040213.01 | 0.816748 | 4.712820e-52 | 3.367852e-49 |
| MsG0280008165.01 | MsG0780040235.01 | 0.841078 | 5.907881e-58 | 8.582804e-55 |
| MsG0280008165.01 | MsG0780040681.01 | 0.874965 | 4.471523e-68 | 2.052617e-64 |
| MsG0280008165.01 | MsG0780041074.01 | 0.818410 | 1.989058e-52 | 1.487859e-49 |
| MsG0280008165.01 | MsG0780041468.01 | 0.849798 | 2.566229e-60 | 4.922124e-57 |
| MsG0280008165.01 | MsG0880041861.01 | 0.824962 | 6.075091e-54 | 5.463010e-51 |
| MsG0280008165.01 | MsG0880041862.01 | 0.814800 | 1.281246e-51 | 8.681416e-49 |
| MsG0280008165.01 | MsG0880041864.01 | 0.864882 | 8.828192e-65 | 2.815111e-61 |
| MsG0280008165.01 | MsG0880042516.01 | 0.809387 | 1.940462e-50 | 1.137798e-47 |
| MsG0280008165.01 | MsG0880043019.01 | 0.801287 | 9.669847e-49 | 4.600467e-46 |
| MsG0280008165.01 | MsG0880043020.01 | 0.804269 | 2.342470e-49 | 1.202527e-46 |
| MsG0280008165.01 | MsG0880043157.01 | 0.805495 | 1.298520e-49 | 6.879862e-47 |
| MsG0280008165.01 | MsG0880043298.01 | 0.829629 | 4.626428e-55 | 4.761532e-52 |
| MsG0280008165.01 | MsG0880044043.01 | 0.832422 | 9.537008e-56 | 1.065469e-52 |
| MsG0280008165.01 | MsG0880044615.01 | 0.802446 | 5.588600e-49 | 2.738166e-46 |
| MsG0280008165.01 | MsG0880044629.01 | 0.808700 | 2.723415e-50 | 1.567786e-47 |
| MsG0280008165.01 | MsG0880044891.01 | 0.808527 | 2.964325e-50 | 1.698902e-47 |
| MsG0280008165.01 | MsG0880045402.01 | 0.808524 | 2.968584e-50 | 1.701240e-47 |
| MsG0280008165.01 | MsG0880045624.01 | 0.829019 | 6.505307e-55 | 6.576003e-52 |
| MsG0280008165.01 | MsG0880046200.01 | 0.828820 | 7.270190e-55 | 7.306576e-52 |
| MsG0280008165.01 | MsG0880046296.01 | 0.835826 | 1.338556e-56 | 1.655977e-53 |
| MsG0280008165.01 | MsG0880046699.01 | 0.831788 | 1.368657e-55 | 1.500945e-52 |
| MsG0280008165.01 | MsG0880047055.01 | -0.804384 | 2.217175e-49 | 1.141594e-46 |
| MsG0280008165.01 | MsG0880047401.01 | 0.864551 | 1.121345e-64 | 3.534468e-61 |
| MsG0280008165.01 | MsG0880047432.01 | 0.825364 | 4.880814e-54 | 4.439266e-51 |
| MsG0280008165.01 | MsG0880047758.01 | 0.852677 | 3.944574e-61 | 8.306193e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008165.01.T01 | MTR_2g438740 | 78.824 | 595 | 27 | 4 | 10 | 519 | 1 | 581 | 0.0 | 909 |
| MsG0280008165.01.T01 | MTR_2g438720 | 46.384 | 567 | 216 | 6 | 39 | 518 | 140 | 705 | 1.21e-172 | 504 |
| MsG0280008165.01.T01 | MTR_2g438760 | 46.726 | 565 | 234 | 5 | 19 | 518 | 13 | 575 | 1.88e-172 | 499 |
| MsG0280008165.01.T01 | MTR_2g438400 | 45.324 | 556 | 220 | 4 | 46 | 518 | 4 | 558 | 2.30e-168 | 488 |
| MsG0280008165.01.T01 | MTR_2g438700 | 45.326 | 567 | 222 | 6 | 39 | 518 | 138 | 703 | 7.08e-167 | 489 |
| MsG0280008165.01.T01 | MTR_2g438440 | 44.346 | 566 | 228 | 5 | 39 | 518 | 135 | 699 | 6.58e-163 | 479 |
| MsG0280008165.01.T01 | MTR_2g438640 | 43.993 | 566 | 230 | 5 | 39 | 518 | 140 | 704 | 5.58e-160 | 472 |
| MsG0280008165.01.T01 | MTR_2g438640 | 42.403 | 566 | 213 | 6 | 39 | 518 | 140 | 678 | 3.37e-148 | 441 |
| MsG0280008165.01.T01 | MTR_2g438470 | 41.159 | 345 | 181 | 5 | 69 | 392 | 155 | 498 | 5.52e-77 | 251 |
| MsG0280008165.01.T01 | MTR_2g438640 | 60.294 | 204 | 80 | 1 | 315 | 518 | 399 | 601 | 3.77e-74 | 246 |
| MsG0280008165.01.T01 | MTR_2g438640 | 35.079 | 191 | 89 | 3 | 39 | 194 | 140 | 330 | 3.57e-34 | 136 |
| MsG0280008165.01.T01 | MTR_5g028190 | 36.085 | 424 | 226 | 11 | 103 | 506 | 135 | 533 | 8.95e-73 | 241 |
| MsG0280008165.01.T01 | MTR_3g055310 | 37.538 | 325 | 197 | 5 | 179 | 501 | 23 | 343 | 1.05e-64 | 214 |
| MsG0280008165.01.T01 | MTR_3g055310 | 37.538 | 325 | 197 | 5 | 179 | 501 | 86 | 406 | 3.97e-64 | 214 |
| MsG0280008165.01.T01 | MTR_5g028450 | 40.753 | 292 | 170 | 2 | 217 | 505 | 4 | 295 | 1.27e-63 | 210 |
| MsG0280008165.01.T01 | MTR_3g055310 | 37.538 | 325 | 197 | 5 | 179 | 501 | 138 | 458 | 1.47e-63 | 214 |
| MsG0280008165.01.T01 | MTR_3g055310 | 37.538 | 325 | 197 | 5 | 179 | 501 | 166 | 486 | 2.34e-63 | 215 |
| MsG0280008165.01.T01 | MTR_3g055310 | 37.538 | 325 | 197 | 5 | 179 | 501 | 164 | 484 | 2.61e-63 | 214 |
| MsG0280008165.01.T01 | MTR_3g055310 | 37.538 | 325 | 197 | 5 | 179 | 501 | 191 | 511 | 3.89e-63 | 215 |
| MsG0280008165.01.T01 | MTR_5g028130 | 38.983 | 295 | 173 | 3 | 217 | 506 | 45 | 337 | 8.54e-62 | 206 |
| MsG0280008165.01.T01 | MTR_5g091220 | 38.801 | 317 | 177 | 4 | 190 | 505 | 302 | 602 | 1.96e-60 | 209 |
| MsG0280008165.01.T01 | MTR_5g028930 | 38.194 | 288 | 166 | 4 | 212 | 492 | 319 | 601 | 6.85e-52 | 187 |
| MsG0280008165.01.T01 | MTR_2g020510 | 33.226 | 310 | 201 | 3 | 193 | 500 | 370 | 675 | 3.04e-47 | 175 |
| MsG0280008165.01.T01 | MTR_3g058570 | 35.135 | 296 | 182 | 3 | 215 | 503 | 85 | 377 | 1.95e-44 | 161 |
| MsG0280008165.01.T01 | MTR_1g113820 | 27.168 | 519 | 301 | 8 | 62 | 512 | 59 | 568 | 1.10e-43 | 163 |
| MsG0280008165.01.T01 | MTR_2g020450 | 34.333 | 300 | 185 | 4 | 215 | 512 | 394 | 683 | 5.87e-43 | 162 |
| MsG0280008165.01.T01 | MTR_3g455790 | 30.588 | 340 | 221 | 7 | 153 | 486 | 248 | 578 | 7.62e-43 | 161 |
| MsG0280008165.01.T01 | MTR_2g020470 | 32.903 | 310 | 182 | 6 | 193 | 500 | 372 | 657 | 1.05e-41 | 159 |
| MsG0280008165.01.T01 | MTR_5g085350 | 36.082 | 291 | 181 | 3 | 215 | 501 | 425 | 714 | 2.10e-41 | 158 |
| MsG0280008165.01.T01 | MTR_5g085350 | 36.082 | 291 | 181 | 3 | 215 | 501 | 438 | 727 | 2.46e-41 | 158 |
| MsG0280008165.01.T01 | MTR_5g085340 | 34.576 | 295 | 186 | 2 | 215 | 503 | 444 | 737 | 7.67e-40 | 154 |
| MsG0280008165.01.T01 | MTR_2g017930 | 34.333 | 300 | 187 | 5 | 199 | 497 | 347 | 637 | 9.80e-39 | 150 |
| MsG0280008165.01.T01 | MTR_3g452020 | 29.841 | 315 | 211 | 5 | 178 | 486 | 93 | 403 | 2.51e-38 | 145 |
| MsG0280008165.01.T01 | MTR_3g051060 | 31.507 | 292 | 194 | 4 | 215 | 501 | 435 | 725 | 3.17e-38 | 149 |
| MsG0280008165.01.T01 | MTR_6g017215 | 41.477 | 176 | 102 | 1 | 315 | 490 | 6 | 180 | 5.58e-38 | 139 |
| MsG0280008165.01.T01 | MTR_5g028690 | 45.098 | 153 | 84 | 0 | 310 | 462 | 36 | 188 | 1.11e-37 | 139 |
| MsG0280008165.01.T01 | MTR_1g113760 | 27.313 | 454 | 282 | 10 | 78 | 488 | 69 | 517 | 2.86e-37 | 144 |
| MsG0280008165.01.T01 | MTR_3g452020 | 29.936 | 314 | 210 | 5 | 179 | 486 | 270 | 579 | 3.05e-37 | 145 |
| MsG0280008165.01.T01 | MTR_5g085360 | 33.471 | 242 | 152 | 3 | 278 | 518 | 504 | 737 | 8.11e-36 | 142 |
| MsG0280008165.01.T01 | MTR_5g028110 | 36.224 | 196 | 98 | 4 | 315 | 506 | 2 | 174 | 1.64e-31 | 120 |
| MsG0280008165.01.T01 | MTR_3g050500 | 30.000 | 290 | 196 | 4 | 217 | 500 | 431 | 719 | 2.08e-31 | 129 |
| MsG0280008165.01.T01 | MTR_5g028900 | 42.857 | 147 | 72 | 3 | 317 | 463 | 4 | 138 | 2.18e-29 | 113 |
| MsG0280008165.01.T01 | MTR_5g028840 | 34.759 | 187 | 115 | 3 | 315 | 494 | 2 | 188 | 1.55e-28 | 112 |
| MsG0280008165.01.T01 | MTR_2g438580 | 55.952 | 84 | 36 | 1 | 328 | 411 | 1 | 83 | 1.37e-26 | 103 |
| MsG0280008165.01.T01 | MTR_1g113730 | 30.660 | 212 | 139 | 3 | 217 | 425 | 49 | 255 | 1.98e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008165.01.T01 | AT3G18670 | 33.586 | 527 | 277 | 11 | 54 | 519 | 83 | 597 | 2.06e-86 | 278 |
| MsG0280008165.01.T01 | AT5G35810 | 43.582 | 335 | 183 | 3 | 187 | 515 | 8 | 342 | 9.86e-85 | 266 |
| MsG0280008165.01.T01 | AT3G18670 | 40.968 | 310 | 180 | 3 | 211 | 519 | 345 | 652 | 7.68e-72 | 241 |
| MsG0280008165.01.T01 | AT5G04700 | 39.130 | 322 | 191 | 3 | 186 | 505 | 338 | 656 | 5.53e-59 | 207 |
| MsG0280008165.01.T01 | AT5G04730 | 39.535 | 301 | 178 | 3 | 217 | 515 | 301 | 599 | 1.27e-58 | 204 |
| MsG0280008165.01.T01 | AT3G54065 | 45.887 | 231 | 119 | 1 | 295 | 519 | 2 | 232 | 3.73e-56 | 188 |
| MsG0280008165.01.T01 | AT5G04690 | 35.826 | 321 | 198 | 4 | 186 | 505 | 299 | 612 | 3.35e-52 | 187 |
| MsG0280008165.01.T01 | AT5G04690 | 35.826 | 321 | 198 | 4 | 186 | 505 | 319 | 632 | 4.76e-52 | 187 |
| MsG0280008165.01.T01 | AT5G04690 | 35.826 | 321 | 198 | 4 | 186 | 505 | 333 | 646 | 6.10e-52 | 187 |
| MsG0280008165.01.T01 | AT5G04680 | 36.254 | 331 | 196 | 5 | 186 | 505 | 202 | 528 | 4.77e-51 | 183 |
| MsG0280008165.01.T01 | AT5G04680 | 36.254 | 331 | 196 | 5 | 186 | 505 | 311 | 637 | 1.95e-50 | 183 |
| MsG0280008165.01.T01 | AT5G04680 | 36.254 | 331 | 196 | 5 | 186 | 505 | 325 | 651 | 2.31e-50 | 183 |
| MsG0280008165.01.T01 | AT5G04680 | 36.254 | 331 | 196 | 5 | 186 | 505 | 354 | 680 | 3.76e-50 | 183 |
| MsG0280008165.01.T01 | AT5G35830 | 36.667 | 150 | 65 | 3 | 57 | 177 | 89 | 237 | 1.82e-18 | 86.3 |
| MsG0280008165.01.T01 | AT3G12360 | 20.085 | 473 | 337 | 13 | 23 | 482 | 91 | 535 | 2.11e-12 | 70.1 |
| MsG0280008165.01.T01 | AT3G12360 | 20.085 | 473 | 337 | 13 | 23 | 482 | 79 | 523 | 2.15e-12 | 70.1 |
| MsG0280008165.01.T01 | AT5G02620 | 23.888 | 427 | 244 | 18 | 97 | 483 | 90 | 475 | 6.66e-11 | 65.1 |
| MsG0280008165.01.T01 | AT5G02620 | 23.888 | 427 | 244 | 18 | 97 | 483 | 90 | 475 | 6.66e-11 | 65.1 |
| MsG0280008165.01.T01 | AT5G02620 | 23.888 | 427 | 244 | 18 | 97 | 483 | 90 | 475 | 6.66e-11 | 65.1 |
Find 96 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAAACTCGGGACTTTA+TGG | 0.155576 | 2:-26565478 | MsG0280008165.01.T01:intron |
| ATGAATTGTTGCCATCAATT+AGG | 0.186457 | 2:-26565627 | MsG0280008165.01.T01:CDS |
| TCGAGTATTTCTTTACATTT+AGG | 0.190510 | 2:+26565532 | None:intergenic |
| TCTTTGAAAGATTGCATAAA+TGG | 0.218928 | 2:-26564459 | MsG0280008165.01.T01:CDS |
| CATTAACATTACCATGAAAT+AGG | 0.220099 | 2:+26563523 | None:intergenic |
| GCTGGTTTATCTAAATAATT+AGG | 0.228180 | 2:+26564004 | None:intergenic |
| CTGAGTTCCCATAACAAATT+AGG | 0.270857 | 2:+26564561 | None:intergenic |
| TGAATTGTTGCCATCAATTA+GGG | 0.271979 | 2:-26565626 | MsG0280008165.01.T01:CDS |
| TTGCAGAGAAATGGCTTTAG+AGG | 0.299985 | 2:-26566845 | MsG0280008165.01.T01:intron |
| CATATTATCATGGTTTGAAA+TGG | 0.303488 | 2:-26563778 | MsG0280008165.01.T01:CDS |
| ACATTTGTAGTTCTTTATTT+AGG | 0.305317 | 2:-26563661 | MsG0280008165.01.T01:CDS |
| CACTTATCCTAATTTGTTAT+GGG | 0.313348 | 2:-26564568 | MsG0280008165.01.T01:CDS |
| GCACTTATCCTAATTTGTTA+TGG | 0.313386 | 2:-26564569 | MsG0280008165.01.T01:CDS |
| GCAAGAACAGAAATAAAATT+AGG | 0.316156 | 2:+26563752 | None:intergenic |
| CTTCACAAAGCAGCACTAAA+AGG | 0.335945 | 2:-26565896 | MsG0280008165.01.T01:CDS |
| CATGCAGAATTGCTTCAAAA+AGG | 0.338739 | 2:-26564145 | MsG0280008165.01.T01:CDS |
| TGTTCACTTTGTCGAGGAAT+TGG | 0.345157 | 2:-26565764 | MsG0280008165.01.T01:CDS |
| CCATCATCTCTGAGTCATCT+AGG | 0.345769 | 2:+26564670 | None:intergenic |
| ACTAATGCACCGTGATCATT+TGG | 0.358694 | 2:-26565737 | MsG0280008165.01.T01:CDS |
| GAAGGGGAACACATTGGTTT+AGG | 0.361388 | 2:+26565915 | None:intergenic |
| TGTTCAACTTGCTGAGATAT+TGG | 0.369153 | 2:-26565659 | MsG0280008165.01.T01:CDS |
| CTGTCTAAACTGGCTAGATT+TGG | 0.370912 | 2:+26566816 | None:intergenic |
| TTGTTTCCTTTGCAGAGAAA+TGG | 0.387889 | 2:-26566854 | MsG0280008165.01.T01:intron |
| AAGGCATTGCGCCTATTTCA+TGG | 0.394651 | 2:-26563534 | MsG0280008165.01.T01:three_prime_UTR |
| TTAAGCTTATACGACGCATC+TGG | 0.395130 | 2:-26564707 | MsG0280008165.01.T01:CDS |
| GGAGGAGAGGCTGTCTAAAC+TGG | 0.401751 | 2:+26566806 | None:intergenic |
| CCTTGTCCACCCCTAATTGA+TGG | 0.405706 | 2:+26565616 | None:intergenic |
| CACAAATAACGCCACTAGTC+CGG | 0.427785 | 2:+26563847 | None:intergenic |
| CTAAAAGGTGATTGGGAAGA+AGG | 0.429429 | 2:-26565881 | MsG0280008165.01.T01:intron |
| AAGCAGCACTAAAAGGTGAT+TGG | 0.435433 | 2:-26565889 | MsG0280008165.01.T01:CDS |
| AAATGATGCTCGAATTATCA+TGG | 0.437423 | 2:-26564344 | MsG0280008165.01.T01:CDS |
| AGGTGTTACTCCTCTTTACT+TGG | 0.437846 | 2:-26565596 | MsG0280008165.01.T01:CDS |
| ATATTATCATGGTTTGAAAT+GGG | 0.443778 | 2:-26563777 | MsG0280008165.01.T01:CDS |
| CTCTGCAATGAAATTGATTG+AGG | 0.445736 | 2:+26565955 | None:intergenic |
| ACGATTATCGCTGCAGAAGT+TGG | 0.450896 | 2:-26564621 | MsG0280008165.01.T01:CDS |
| TTCTACATAACATATTATCA+TGG | 0.459801 | 2:-26563788 | MsG0280008165.01.T01:CDS |
| AGCAGCACTAAAAGGTGATT+GGG | 0.459876 | 2:-26565888 | MsG0280008165.01.T01:CDS |
| TTGCCTTTGAAGTTGATATC+CGG | 0.466565 | 2:-26563866 | MsG0280008165.01.T01:CDS |
| GTTTCGACTCTCATAGCTAC+AGG | 0.467654 | 2:-26564082 | MsG0280008165.01.T01:CDS |
| CCTAGATGACTCAGAGATGA+TGG | 0.470237 | 2:-26564670 | MsG0280008165.01.T01:CDS |
| GAGACTATATTGAGCCGATC+AGG | 0.472006 | 2:+26564381 | None:intergenic |
| GCAAACAGCGAATTCTTGTA+TGG | 0.482111 | 2:-26564107 | MsG0280008165.01.T01:CDS |
| TCTGCAATGAAATTGATTGA+GGG | 0.490761 | 2:+26565956 | None:intergenic |
| CAATGTTAGCACCGCCTGAT+CGG | 0.494071 | 2:-26564395 | MsG0280008165.01.T01:CDS |
| TCAGCTGCATTTAGCTTACC+AGG | 0.494468 | 2:-26564052 | MsG0280008165.01.T01:CDS |
| GCTCCGCATATCGCGAGATA+AGG | 0.498008 | 2:+26563906 | None:intergenic |
| AAAGCAAATACGAGGAATGC+TGG | 0.502490 | 2:+26563986 | None:intergenic |
| TCTAAACTGGCTAGATTTGG+AGG | 0.504549 | 2:+26566819 | None:intergenic |
| GCTCGAATTATCATGGTTTG+AGG | 0.512843 | 2:-26564337 | MsG0280008165.01.T01:intron |
| AAATAAAGAACTACAAATGT+AGG | 0.513663 | 2:+26563664 | None:intergenic |
| TTTGGAATTGCAAGATTGCT+CGG | 0.517151 | 2:-26565719 | MsG0280008165.01.T01:CDS |
| CTCAATCAATTTCATTGCAG+AGG | 0.521162 | 2:-26565954 | MsG0280008165.01.T01:CDS |
| TTGGAATTGCAAGATTGCTC+GGG | 0.533926 | 2:-26565718 | MsG0280008165.01.T01:CDS |
| ATTTGCTTTATCCGACTCCA+TGG | 0.541197 | 2:-26563972 | MsG0280008165.01.T01:CDS |
| GTGTTATCATTGTTTCCACC+TGG | 0.542558 | 2:+26564034 | None:intergenic |
| TGTAAAACAGCCAAGTAAAG+AGG | 0.542761 | 2:+26565586 | None:intergenic |
| TTTAGTGCTGCTTTGTGAAG+GGG | 0.544540 | 2:+26565899 | None:intergenic |
| CTTTGTGAAGGGGAACACAT+TGG | 0.546773 | 2:+26565909 | None:intergenic |
| TGATCGGCTCAATATAGTCT+CGG | 0.546856 | 2:-26564379 | MsG0280008165.01.T01:CDS |
| CATCATCTCTGAGTCATCTA+GGG | 0.550587 | 2:+26564671 | None:intergenic |
| CCATCAATTAGGGGTGGACA+AGG | 0.554840 | 2:-26565616 | MsG0280008165.01.T01:CDS |
| GATCGGCTCAATATAGTCTC+GGG | 0.558296 | 2:-26564378 | MsG0280008165.01.T01:CDS |
| GTTCCTCACTTGTATAAACT+CGG | 0.560727 | 2:-26565488 | MsG0280008165.01.T01:CDS |
| GCGATAATCGTTACTTGAGA+AGG | 0.563363 | 2:+26564633 | None:intergenic |
| AAATACTCGAGGAAAACGAT+TGG | 0.569851 | 2:-26565519 | MsG0280008165.01.T01:CDS |
| TAGCGAATCATACGTTTACT+CGG | 0.572760 | 2:+26563638 | None:intergenic |
| GCTTACTAGTAGAAACTAAG+TGG | 0.576242 | 2:+26566785 | None:intergenic |
| CGTCGTATAAGCTTAAGCAT+TGG | 0.578723 | 2:+26564714 | None:intergenic |
| TAAGCTTATACGACGCATCT+GGG | 0.583865 | 2:-26564706 | MsG0280008165.01.T01:CDS |
| CGAGATAAGTGCCATGGAGT+CGG | 0.585094 | 2:+26563961 | None:intergenic |
| CGCATATCGCGAGATAAGGA+TGG | 0.586729 | 2:+26563910 | None:intergenic |
| CATCCTTATCTCGCGATATG+CGG | 0.590914 | 2:-26563909 | MsG0280008165.01.T01:CDS |
| GTTATGGGAACTCAGTAACA+AGG | 0.591126 | 2:-26564553 | MsG0280008165.01.T01:CDS |
| AAGCAAACAGTGAGATGGCA+TGG | 0.593244 | 2:-26565564 | MsG0280008165.01.T01:CDS |
| GAAGTTGATATCCGGACTAG+TGG | 0.593266 | 2:-26563858 | MsG0280008165.01.T01:CDS |
| AGACATATAAACAACGGTAT+CGG | 0.594156 | 2:+26563722 | None:intergenic |
| AGTCCGGATATCAACTTCAA+AGG | 0.603725 | 2:+26563863 | None:intergenic |
| TCAAAATGAAGATACTAGCA+TGG | 0.604184 | 2:+26564496 | None:intergenic |
| GTAGAAACTAAGTGGAGGAG+AGG | 0.615280 | 2:+26566793 | None:intergenic |
| TGAAGACGAGATAAGTGCCA+TGG | 0.615834 | 2:+26563955 | None:intergenic |
| TTTACAAGCAAACAGTGAGA+TGG | 0.616121 | 2:-26565569 | MsG0280008165.01.T01:CDS |
| TTGTTGCCATCAATTAGGGG+TGG | 0.620541 | 2:-26565622 | MsG0280008165.01.T01:CDS |
| AAATCATGTTCACTTTGTCG+AGG | 0.626112 | 2:-26565770 | MsG0280008165.01.T01:CDS |
| ACTATATTGAGCCGATCAGG+CGG | 0.628275 | 2:+26564384 | None:intergenic |
| TTCCTCACTTGTATAAACTC+GGG | 0.633269 | 2:-26565487 | MsG0280008165.01.T01:CDS |
| CTTGCAATTCCAAATGATCA+CGG | 0.637982 | 2:+26565728 | None:intergenic |
| GTCCCGAGTTTATACAAGTG+AGG | 0.646956 | 2:+26565485 | None:intergenic |
| TTATGGGAACTCAGTAACAA+GGG | 0.656955 | 2:-26564552 | MsG0280008165.01.T01:CDS |
| GAATTGTTGCCATCAATTAG+GGG | 0.658510 | 2:-26565625 | MsG0280008165.01.T01:CDS |
| AACTGTAGACATATAAACAA+CGG | 0.659566 | 2:+26563716 | None:intergenic |
| TACTAGTAGAAACTAAGTGG+AGG | 0.666713 | 2:+26566788 | None:intergenic |
| GCTGCATTTAGCTTACCAGG+TGG | 0.684232 | 2:-26564049 | MsG0280008165.01.T01:CDS |
| TAAATGTAAAGAAATACTCG+AGG | 0.687289 | 2:-26565530 | MsG0280008165.01.T01:CDS |
| TCTTTCGTAAATAGTTCGCG+AGG | 0.694354 | 2:+26564169 | None:intergenic |
| AGTCGGATAAAGCAAATACG+AGG | 0.727881 | 2:+26563978 | None:intergenic |
| AAATGAAGATACTAGCATGG+CGG | 0.748249 | 2:+26564499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGATATTTAATATCTTT+GGG | + | Chr2:26563814-26563833 | None:intergenic | 10.0% |
| !! | AAATATTATCCAACATAATT+TGG | - | Chr2:26565319-26565338 | MsG0280008165.01.T01:intron | 15.0% |
| !! | ATGATTTCTTAACAAAAAAT+AGG | - | Chr2:26564184-26564203 | MsG0280008165.01.T01:CDS | 15.0% |
| !! | GTAAAGATATTTAATATCTT+TGG | + | Chr2:26563815-26563834 | None:intergenic | 15.0% |
| !! | GTAATATTAATTAAACATTC+AGG | - | Chr2:26565752-26565771 | MsG0280008165.01.T01:CDS | 15.0% |
| !!! | ATTATATTTCTTAATTTGTG+TGG | + | Chr2:26565587-26565606 | None:intergenic | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | - | Chr2:26566949-26566968 | MsG0280008165.01.T01:intron | 15.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | + | Chr2:26566841-26566860 | None:intergenic | 20.0% |
| !! | AACAACCAATAACAATTATT+CGG | - | Chr2:26564085-26564104 | MsG0280008165.01.T01:CDS | 20.0% |
| !! | AATATGTGTTAAACTTGAAA+CGG | - | Chr2:26564146-26564165 | MsG0280008165.01.T01:CDS | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | - | Chr2:26566303-26566322 | MsG0280008165.01.T01:intron | 20.0% |
| !! | TGCTTATTAAACTTAATTAC+TGG | - | Chr2:26563580-26563599 | MsG0280008165.01.T01:three_prime_UTR | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | - | Chr2:26566714-26566733 | MsG0280008165.01.T01:intron | 20.0% |
| !! | TTCTTAACAAAAAATAGGAT+AGG | - | Chr2:26564189-26564208 | MsG0280008165.01.T01:CDS | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | - | Chr2:26566841-26566860 | MsG0280008165.01.T01:CDS | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | - | Chr2:26566725-26566744 | MsG0280008165.01.T01:intron | 20.0% |
| !!! | CTGATTTTTTTTAAAGATAC+TGG | - | Chr2:26563609-26563628 | MsG0280008165.01.T01:three_prime_UTR | 20.0% |
| !!! | TATGAATAGCATTTTTGTTA+TGG | - | Chr2:26564123-26564142 | MsG0280008165.01.T01:CDS | 20.0% |
| !!! | TATTTGGCTAGATTTTAAAA+CGG | + | Chr2:26563750-26563769 | None:intergenic | 20.0% |
| !!! | TCATTTTGATACATGAAATA+AGG | - | Chr2:26566020-26566039 | MsG0280008165.01.T01:intron | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | + | Chr2:26566297-26566316 | None:intergenic | 20.0% |
| ! | AACTGTAGACATATAAACAA+CGG | + | Chr2:26566789-26566808 | None:intergenic | 25.0% |
| ! | ACAACCAATAACAATTATTC+GGG | - | Chr2:26564086-26564105 | MsG0280008165.01.T01:CDS | 25.0% |
| ! | ATATGTGTTAAACTTGAAAC+GGG | - | Chr2:26564147-26564166 | MsG0280008165.01.T01:CDS | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | - | Chr2:26566724-26566743 | MsG0280008165.01.T01:intron | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | + | Chr2:26566982-26567001 | None:intergenic | 25.0% |
| ! | CCAACATAATTTGGATATTA+TGG | - | Chr2:26565328-26565347 | MsG0280008165.01.T01:intron | 25.0% |
| ! | CCATAATATCCAAATTATGT+TGG | + | Chr2:26565331-26565350 | None:intergenic | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | + | Chr2:26566753-26566772 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | - | Chr2:26564972-26564991 | MsG0280008165.01.T01:intron | 25.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | + | Chr2:26564973-26564992 | None:intergenic | 25.0% |
| !! | AACATCATCTTATTTATCCA+TGG | + | Chr2:26563553-26563572 | None:intergenic | 25.0% |
| !! | ATCTTAAAGATGATTTTGTG+AGG | + | Chr2:26564265-26564284 | None:intergenic | 25.0% |
| !! | CAAATATTTTCTCATACAGA+GGG | - | Chr2:26563764-26563783 | MsG0280008165.01.T01:CDS | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | + | Chr2:26566501-26566520 | None:intergenic | 25.0% |
| !! | TCTTTGAAAGATTGCATAAA+TGG | - | Chr2:26566043-26566062 | MsG0280008165.01.T01:intron | 25.0% |
| !!! | ATTTGGCTAGATTTTAAAAC+GGG | + | Chr2:26563749-26563768 | None:intergenic | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | - | Chr2:26565934-26565953 | MsG0280008165.01.T01:CDS | 25.0% |
| !!! | CTTATTTATCCATGGTTTTT+TGG | + | Chr2:26563545-26563564 | None:intergenic | 25.0% |
| AAATGATGCTCGAATTATCA+TGG | - | Chr2:26566158-26566177 | MsG0280008165.01.T01:intron | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | + | Chr2:26566783-26566802 | None:intergenic | 30.0% | |
| ATCTCATCTCTCAATCTATT+AGG | + | Chr2:26565672-26565691 | None:intergenic | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | - | Chr2:26564875-26564894 | MsG0280008165.01.T01:intron | 30.0% | |
| ATGTGAACTTACATAAATGC+AGG | + | Chr2:26565498-26565517 | None:intergenic | 30.0% | |
| CCTCTGTATGAGAAAATATT+TGG | + | Chr2:26563766-26563785 | None:intergenic | 30.0% | |
| TCAAAATGAAGATACTAGCA+TGG | + | Chr2:26566009-26566028 | None:intergenic | 30.0% | |
| TCTGCAATGAAATTGATTGA+GGG | + | Chr2:26564549-26564568 | None:intergenic | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | - | Chr2:26564876-26564895 | MsG0280008165.01.T01:intron | 30.0% | |
| TGTAAGATTCCAAAAAACCA+TGG | - | Chr2:26563533-26563552 | MsG0280008165.01.T01:three_prime_UTR | 30.0% | |
| TGTTCCCGAATAATTGTTAT+TGG | + | Chr2:26564093-26564112 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | - | Chr2:26564562-26564581 | MsG0280008165.01.T01:CDS | 30.0% | |
| ! | AATCGACTTTATGAAATGAG+AGG | - | Chr2:26563942-26563961 | MsG0280008165.01.T01:CDS | 30.0% |
| ! | AGATTGCATAAATGGTTTTC+TGG | - | Chr2:26566051-26566070 | MsG0280008165.01.T01:intron | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | - | Chr2:26566058-26566077 | MsG0280008165.01.T01:intron | 30.0% |
| ! | CCAAATATTTTCTCATACAG+AGG | - | Chr2:26563763-26563782 | MsG0280008165.01.T01:CDS | 30.0% |
| ! | TATGTCTACAGTTTTCTCTA+TGG | - | Chr2:26566796-26566815 | MsG0280008165.01.T01:CDS | 30.0% |
| !! | ATACCTCACTTTAAAACAGA+TGG | + | Chr2:26565550-26565569 | None:intergenic | 30.0% |
| !! | GCACTTATCCTAATTTGTTA+TGG | - | Chr2:26565933-26565952 | MsG0280008165.01.T01:CDS | 30.0% |
| !!! | TAACTTTTTGGCTCGAAAAA+AGG | - | Chr2:26563787-26563806 | MsG0280008165.01.T01:CDS | 30.0% |
| AAATACTCGAGGAAAACGAT+TGG | - | Chr2:26564983-26565002 | MsG0280008165.01.T01:intron | 35.0% | |
| AAATCATGTTCACTTTGTCG+AGG | - | Chr2:26564732-26564751 | MsG0280008165.01.T01:intron | 35.0% | |
| AAATGAAGATACTAGCATGG+CGG | + | Chr2:26566006-26566025 | None:intergenic | 35.0% | |
| AGTTGCATTTCAAGAACTAG+TGG | + | Chr2:26565063-26565082 | None:intergenic | 35.0% | |
| CATGCAGAATTGCTTCAAAA+AGG | - | Chr2:26566357-26566376 | MsG0280008165.01.T01:intron | 35.0% | |
| CTCAATCAATTTCATTGCAG+AGG | - | Chr2:26564548-26564567 | MsG0280008165.01.T01:CDS | 35.0% | |
| CTCTGCAATGAAATTGATTG+AGG | + | Chr2:26564550-26564569 | None:intergenic | 35.0% | |
| CTGAGTTCCCATAACAAATT+AGG | + | Chr2:26565944-26565963 | None:intergenic | 35.0% | |
| CTTGCAATTCCAAATGATCA+CGG | + | Chr2:26564777-26564796 | None:intergenic | 35.0% | |
| GAATTGTTGCCATCAATTAG+GGG | - | Chr2:26564877-26564896 | MsG0280008165.01.T01:intron | 35.0% | |
| GCTTACTAGTAGAAACTAAG+TGG | + | Chr2:26563720-26563739 | None:intergenic | 35.0% | |
| GTTCCTCACTTGTATAAACT+CGG | - | Chr2:26565014-26565033 | MsG0280008165.01.T01:intron | 35.0% | |
| TACTAGTAGAAACTAAGTGG+AGG | + | Chr2:26563717-26563736 | None:intergenic | 35.0% | |
| TAGCGAATCATACGTTTACT+CGG | + | Chr2:26566867-26566886 | None:intergenic | 35.0% | |
| TGCATGACTCAAATGGTAAA+AGG | + | Chr2:26564395-26564414 | None:intergenic | 35.0% | |
| TGCTTCAAAAAGGAGAATCA+TGG | - | Chr2:26566367-26566386 | MsG0280008165.01.T01:intron | 35.0% | |
| TGTAAAACAGCCAAGTAAAG+AGG | + | Chr2:26564919-26564938 | None:intergenic | 35.0% | |
| TGTATAAACTCGGGACTTTA+TGG | - | Chr2:26565024-26565043 | MsG0280008165.01.T01:intron | 35.0% | |
| TTATGGGAACTCAGTAACAA+GGG | - | Chr2:26565950-26565969 | MsG0280008165.01.T01:CDS | 35.0% | |
| TTCCTCACTTGTATAAACTC+GGG | - | Chr2:26565015-26565034 | MsG0280008165.01.T01:intron | 35.0% | |
| TTCTGTATGCATGACTCAAA+TGG | + | Chr2:26564402-26564421 | None:intergenic | 35.0% | |
| TTGTTTCCTTTGCAGAGAAA+TGG | - | Chr2:26563648-26563667 | MsG0280008165.01.T01:CDS | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | - | Chr2:26564933-26564952 | MsG0280008165.01.T01:intron | 35.0% | |
| TTTGTGGTTGTCAAAGTCTT+GGG | - | Chr2:26565458-26565477 | MsG0280008165.01.T01:intron | 35.0% | |
| ! | TCATACAGAGGGTAACTTTT+TGG | - | Chr2:26563775-26563794 | MsG0280008165.01.T01:CDS | 35.0% |
| ! | TTTGGAATTGCAAGATTGCT+CGG | - | Chr2:26564783-26564802 | MsG0280008165.01.T01:intron | 35.0% |
| !! | ACATATGTCATTGATTTCGC+AGG | - | Chr2:26566251-26566270 | MsG0280008165.01.T01:intron | 35.0% |
| !! | TCTATTGGCTCGAAAACATT+CGG | - | Chr2:26565435-26565454 | MsG0280008165.01.T01:intron | 35.0% |
| !! | TGTTCAACTTGCTGAGATAT+TGG | - | Chr2:26564843-26564862 | MsG0280008165.01.T01:intron | 35.0% |
| !! | TTGCCTTTGAAGTTGATATC+CGG | - | Chr2:26566636-26566655 | MsG0280008165.01.T01:intron | 35.0% |
| !!! | TCTCCATCTGTTTTAAAGTG+AGG | - | Chr2:26565544-26565563 | MsG0280008165.01.T01:CDS | 35.0% |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | + | Chr2:26564607-26564626 | None:intergenic | 35.0% |
| AAACCAGCAATGTTGGATCT+TGG | + | Chr2:26564663-26564682 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | + | Chr2:26566519-26566538 | None:intergenic | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | - | Chr2:26564613-26564632 | MsG0280008165.01.T01:CDS | 40.0% | |
| ACTAATGCACCGTGATCATT+TGG | - | Chr2:26564765-26564784 | MsG0280008165.01.T01:intron | 40.0% | |
| AGCAGCACTAAAAGGTGATT+GGG | - | Chr2:26564614-26564633 | MsG0280008165.01.T01:CDS | 40.0% | |
| AGTCCGGATATCAACTTCAA+AGG | + | Chr2:26566642-26566661 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | + | Chr2:26566527-26566546 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | - | Chr2:26566530-26566549 | MsG0280008165.01.T01:intron | 40.0% | |
| CATCATCTCTGAGTCATCTA+GGG | + | Chr2:26565834-26565853 | None:intergenic | 40.0% | |
| CGTCGTATAAGCTTAAGCAT+TGG | + | Chr2:26565791-26565810 | None:intergenic | 40.0% | |
| CTAAAAGGTGATTGGGAAGA+AGG | - | Chr2:26564621-26564640 | MsG0280008165.01.T01:CDS | 40.0% | |
| CTAAAGCCATTTCTCTGCAA+AGG | + | Chr2:26563657-26563676 | None:intergenic | 40.0% | |
| CTGGTTTCTGCCATAACAAA+TGG | - | Chr2:26564676-26564695 | MsG0280008165.01.T01:CDS | 40.0% | |
| CTGTCTAAACTGGCTAGATT+TGG | + | Chr2:26563689-26563708 | None:intergenic | 40.0% | |
| CTTCACAAAGCAGCACTAAA+AGG | - | Chr2:26564606-26564625 | MsG0280008165.01.T01:CDS | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | - | Chr2:26566395-26566414 | MsG0280008165.01.T01:intron | 40.0% | |
| GCGATAATCGTTACTTGAGA+AGG | + | Chr2:26565872-26565891 | None:intergenic | 40.0% | |
| GCTCGAATTATCATGGTTTG+AGG | - | Chr2:26566165-26566184 | MsG0280008165.01.T01:intron | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | + | Chr2:26566471-26566490 | None:intergenic | 40.0% | |
| GTTATGGGAACTCAGTAACA+AGG | - | Chr2:26565949-26565968 | MsG0280008165.01.T01:CDS | 40.0% | |
| GTTTGTGGTTGTCAAAGTCT+TGG | - | Chr2:26565457-26565476 | MsG0280008165.01.T01:intron | 40.0% | |
| TAAGCTTATACGACGCATCT+GGG | - | Chr2:26565796-26565815 | MsG0280008165.01.T01:intron | 40.0% | |
| TCTAAACTGGCTAGATTTGG+AGG | + | Chr2:26563686-26563705 | None:intergenic | 40.0% | |
| TCTTTCGTAAATAGTTCGCG+AGG | + | Chr2:26566336-26566355 | None:intergenic | 40.0% | |
| TGTTCACTTTGTCGAGGAAT+TGG | - | Chr2:26564738-26564757 | MsG0280008165.01.T01:intron | 40.0% | |
| TTAAGCTTATACGACGCATC+TGG | - | Chr2:26565795-26565814 | MsG0280008165.01.T01:intron | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | - | Chr2:26564681-26564700 | MsG0280008165.01.T01:CDS | 40.0% | |
| TTGGAATTGCAAGATTGCTC+GGG | - | Chr2:26564784-26564803 | MsG0280008165.01.T01:intron | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | - | Chr2:26564680-26564699 | MsG0280008165.01.T01:CDS | 40.0% | |
| ! | TGAGACGGGTTTACATCTAT+TGG | - | Chr2:26565420-26565439 | MsG0280008165.01.T01:intron | 40.0% |
| ! | TGATCGGCTCAATATAGTCT+CGG | - | Chr2:26566123-26566142 | MsG0280008165.01.T01:intron | 40.0% |
| !! | AGGTGTTACTCCTCTTTACT+TGG | - | Chr2:26564906-26564925 | MsG0280008165.01.T01:intron | 40.0% |
| !! | GTTTTAAGTCCCGTATTTGC+CGG | - | Chr2:26564039-26564058 | MsG0280008165.01.T01:CDS | 40.0% |
| !! | TATGTCATTGATTTCGCAGG+AGG | - | Chr2:26566254-26566273 | MsG0280008165.01.T01:intron | 40.0% |
| !! | TTGCAGAGAAATGGCTTTAG+AGG | - | Chr2:26563657-26563676 | MsG0280008165.01.T01:CDS | 40.0% |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | + | Chr2:26564606-26564625 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | + | Chr2:26564608-26564627 | None:intergenic | 40.0% |
| AAGCAAACAGTGAGATGGCA+TGG | - | Chr2:26564938-26564957 | MsG0280008165.01.T01:intron | 45.0% | |
| ACGATTATCGCTGCAGAAGT+TGG | - | Chr2:26565881-26565900 | MsG0280008165.01.T01:intron | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | + | Chr2:26566121-26566140 | None:intergenic | 45.0% | |
| AGACCAAGATCCAACATTGC+TGG | - | Chr2:26564657-26564676 | MsG0280008165.01.T01:CDS | 45.0% | |
| ATGGCAGAAACCAGCAATGT+TGG | + | Chr2:26564670-26564689 | None:intergenic | 45.0% | |
| CACAAATAACGCCACTAGTC+CGG | + | Chr2:26566658-26566677 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | - | Chr2:26566593-26566612 | MsG0280008165.01.T01:intron | 45.0% | |
| CCATCATCTCTGAGTCATCT+AGG | + | Chr2:26565835-26565854 | None:intergenic | 45.0% | |
| CCTAGATGACTCAGAGATGA+TGG | - | Chr2:26565832-26565851 | MsG0280008165.01.T01:intron | 45.0% | |
| CTTTGTGAAGGGGAACACAT+TGG | + | Chr2:26564596-26564615 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | + | Chr2:26566124-26566143 | None:intergenic | 45.0% | |
| GTAGAAACTAAGTGGAGGAG+AGG | + | Chr2:26563712-26563731 | None:intergenic | 45.0% | |
| GTCCCGAGTTTATACAAGTG+AGG | + | Chr2:26565020-26565039 | None:intergenic | 45.0% | |
| GTGTTAAACTTGAAACGGGC+AGG | - | Chr2:26564151-26564170 | MsG0280008165.01.T01:CDS | 45.0% | |
| GTTTCGACTCTCATAGCTAC+AGG | - | Chr2:26566420-26566439 | MsG0280008165.01.T01:intron | 45.0% | |
| TAGACGCAGATTCGAATACG+CGG | + | Chr2:26564350-26564369 | None:intergenic | 45.0% | |
| TGAAGACGAGATAAGTGCCA+TGG | + | Chr2:26566550-26566569 | None:intergenic | 45.0% | |
| TTGTTGCCATCAATTAGGGG+TGG | - | Chr2:26564880-26564899 | MsG0280008165.01.T01:intron | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | - | Chr2:26566124-26566143 | MsG0280008165.01.T01:intron | 45.0% |
| ! | GCTCGAAAACATTCGGTTTG+TGG | - | Chr2:26565442-26565461 | MsG0280008165.01.T01:intron | 45.0% |
| ! | GTTGTTTCACACCACTACCT+GGG | + | Chr2:26564071-26564090 | None:intergenic | 45.0% |
| ! | TCAGCTGCATTTAGCTTACC+AGG | - | Chr2:26566450-26566469 | MsG0280008165.01.T01:intron | 45.0% |
| ! | TGGGTGTTTTCCGGCAAATA+CGG | + | Chr2:26564052-26564071 | None:intergenic | 45.0% |
| ! | TTGTGTTTTGCTGCAGCAGT+TGG | - | Chr2:26564817-26564836 | MsG0280008165.01.T01:intron | 45.0% |
| !! | AAGGCATTGCGCCTATTTCA+TGG | - | Chr2:26566968-26566987 | MsG0280008165.01.T01:intron | 45.0% |
| !! | GAAGGGGAACACATTGGTTT+AGG | + | Chr2:26564590-26564609 | None:intergenic | 45.0% |
| !! | GAAGTTGATATCCGGACTAG+TGG | - | Chr2:26566644-26566663 | MsG0280008165.01.T01:intron | 45.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | - | Chr2:26566910-26566929 | MsG0280008165.01.T01:intron | 5.0% |
| AACCGCACTCCATATTGCAG+CGG | - | Chr2:26564705-26564724 | MsG0280008165.01.T01:CDS | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | - | Chr2:26566107-26566126 | MsG0280008165.01.T01:intron | 50.0% | |
| CCATCAATTAGGGGTGGACA+AGG | - | Chr2:26564886-26564905 | MsG0280008165.01.T01:intron | 50.0% | |
| CCTTGTCCACCCCTAATTGA+TGG | + | Chr2:26564889-26564908 | None:intergenic | 50.0% | |
| CGAGATAAGTGCCATGGAGT+CGG | + | Chr2:26566544-26566563 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | + | Chr2:26566595-26566614 | None:intergenic | 50.0% | |
| CGGAGGTGATAGCAATGAGA+CGG | - | Chr2:26565405-26565424 | MsG0280008165.01.T01:intron | 50.0% | |
| GGAGGTGATAGCAATGAGAC+GGG | - | Chr2:26565406-26565425 | MsG0280008165.01.T01:intron | 50.0% | |
| GTATTTGCCGGAAAACACCC+AGG | - | Chr2:26564051-26564070 | MsG0280008165.01.T01:CDS | 50.0% | |
| ! | ACCACTACCTGGGTGTTTTC+CGG | + | Chr2:26564061-26564080 | None:intergenic | 50.0% |
| ! | GATTTGCTCCCGCTGCAATA+TGG | + | Chr2:26564717-26564736 | None:intergenic | 50.0% |
| ! | GCTGCATTTAGCTTACCAGG+TGG | - | Chr2:26566453-26566472 | MsG0280008165.01.T01:intron | 50.0% |
| ! | GGGTGTTTTCCGGCAAATAC+GGG | + | Chr2:26564051-26564070 | None:intergenic | 50.0% |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | + | Chr2:26564689-26564708 | None:intergenic | 50.0% |
| ! | GGTTGTTTCACACCACTACC+TGG | + | Chr2:26564072-26564091 | None:intergenic | 50.0% |
| ACCGCACTCCATATTGCAGC+GGG | - | Chr2:26564706-26564725 | MsG0280008165.01.T01:CDS | 55.0% | |
| GCTCCGCATATCGCGAGATA+AGG | + | Chr2:26566599-26566618 | None:intergenic | 55.0% | |
| GGAGGAGAGGCTGTCTAAAC+TGG | + | Chr2:26563699-26563718 | None:intergenic | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | + | Chr2:26564710-26564729 | None:intergenic | 55.0% | |
| !! | GACGCACTTGCTTTTGCTCG+CGG | - | Chr2:26565385-26565404 | MsG0280008165.01.T01:intron | 55.0% |
| GCCGGAAAACACCCAGGTAG+TGG | - | Chr2:26564057-26564076 | MsG0280008165.01.T01:CDS | 60.0% | |
| !! | GCACTTGCTTTTGCTCGCGG+AGG | - | Chr2:26565388-26565407 | MsG0280008165.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 26563511 | 26567013 | 26563511 | ID=MsG0280008165.01;Name=MsG0280008165.01 |
| Chr2 | mRNA | 26563511 | 26567013 | 26563511 | ID=MsG0280008165.01.T01;Parent=MsG0280008165.01;Name=MsG0280008165.01.T01;_AED=0.46;_eAED=0.47;_QI=0|0.2|0.33|1|0.8|0.83|6|126|519 |
| Chr2 | exon | 26563511 | 26564251 | 26563511 | ID=MsG0280008165.01.T01:exon:3408;Parent=MsG0280008165.01.T01 |
| Chr2 | exon | 26564338 | 26564750 | 26564338 | ID=MsG0280008165.01.T01:exon:3407;Parent=MsG0280008165.01.T01 |
| Chr2 | exon | 26565479 | 26565799 | 26565479 | ID=MsG0280008165.01.T01:exon:3406;Parent=MsG0280008165.01.T01 |
| Chr2 | exon | 26565882 | 26565998 | 26565882 | ID=MsG0280008165.01.T01:exon:3405;Parent=MsG0280008165.01.T01 |
| Chr2 | exon | 26566791 | 26566861 | 26566791 | ID=MsG0280008165.01.T01:exon:3404;Parent=MsG0280008165.01.T01 |
| Chr2 | exon | 26566991 | 26567013 | 26566991 | ID=MsG0280008165.01.T01:exon:3403;Parent=MsG0280008165.01.T01 |
| Chr2 | CDS | 26566991 | 26567013 | 26566991 | ID=MsG0280008165.01.T01:cds;Parent=MsG0280008165.01.T01 |
| Chr2 | CDS | 26566791 | 26566861 | 26566791 | ID=MsG0280008165.01.T01:cds;Parent=MsG0280008165.01.T01 |
| Chr2 | CDS | 26565882 | 26565998 | 26565882 | ID=MsG0280008165.01.T01:cds;Parent=MsG0280008165.01.T01 |
| Chr2 | CDS | 26565479 | 26565799 | 26565479 | ID=MsG0280008165.01.T01:cds;Parent=MsG0280008165.01.T01 |
| Chr2 | CDS | 26564338 | 26564750 | 26564338 | ID=MsG0280008165.01.T01:cds;Parent=MsG0280008165.01.T01 |
| Chr2 | CDS | 26563637 | 26564251 | 26563637 | ID=MsG0280008165.01.T01:cds;Parent=MsG0280008165.01.T01 |
| Chr2 | three_prime_UTR | 26563511 | 26563636 | 26563511 | ID=MsG0280008165.01.T01:three_prime_utr;Parent=MsG0280008165.01.T01 |
| Gene Sequence |
| Protein sequence |
