Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042893.01.T02 | XP_013444542.1 | 89.655 | 667 | 41 | 4 | 1 | 666 | 1 | 640 | 0 | 1149 |
MsG0880042893.01.T01 | XP_013444542.1 | 89.655 | 667 | 41 | 4 | 1 | 666 | 1 | 640 | 0 | 1149 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042893.01.T01 | Q8L500 | 52.023 | 173 | 59 | 1 | 11 | 183 | 13 | 161 | 1.68E-52 | 191 |
MsG0880042893.01.T02 | Q8L500 | 52.023 | 173 | 59 | 1 | 11 | 183 | 13 | 161 | 1.68E-52 | 191 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042893.01.T01 | A0A072TMC5 | 89.655 | 667 | 41 | 4 | 1 | 666 | 1 | 640 | 0.0 | 1149 |
MsG0880042893.01.T02 | A0A072TMC5 | 89.655 | 667 | 41 | 4 | 1 | 666 | 1 | 640 | 0.0 | 1149 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047933.01 | MsG0880042893.01 | 0.904628 | 1.006519e-79 | 1.570303e-75 |
MsG0180003624.01 | MsG0880042893.01 | 0.813160 | 2.946585e-51 | 1.909561e-48 |
MsG0880042893.01 | MsG0880043763.01 | 0.815923 | 7.209682e-52 | 5.036950e-49 |
MsG0380013116.01 | MsG0880042893.01 | 0.824269 | 8.843839e-54 | 7.795355e-51 |
MsG0680034837.01 | MsG0880042893.01 | 0.841999 | 3.380161e-58 | 5.054543e-55 |
MsG0580025052.01 | MsG0880042893.01 | 0.815639 | 8.337635e-52 | 5.780456e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042893.01.T02 | MTR_8g024260 | 89.655 | 667 | 41 | 4 | 1 | 666 | 1 | 640 | 0.0 | 1149 |
MsG0880042893.01.T02 | MTR_7g118260 | 40.639 | 657 | 282 | 19 | 29 | 654 | 8 | 587 | 2.35e-126 | 387 |
MsG0880042893.01.T02 | MTR_3g092780 | 34.819 | 718 | 317 | 26 | 22 | 666 | 43 | 682 | 1.10e-92 | 301 |
MsG0880042893.01.T02 | MTR_3g092780 | 34.771 | 719 | 317 | 26 | 22 | 666 | 43 | 683 | 1.60e-92 | 301 |
MsG0880042893.01.T02 | MTR_3g092780 | 33.809 | 701 | 306 | 21 | 22 | 666 | 43 | 641 | 6.42e-89 | 290 |
MsG0880042893.01.T02 | MTR_3g092780 | 33.761 | 702 | 306 | 21 | 22 | 666 | 43 | 642 | 7.31e-89 | 290 |
MsG0880042893.01.T02 | MTR_7g118260 | 37.773 | 503 | 240 | 17 | 183 | 654 | 41 | 501 | 3.98e-70 | 237 |
MsG0880042893.01.T02 | MTR_7g118260 | 37.986 | 437 | 200 | 15 | 269 | 654 | 1 | 417 | 2.51e-63 | 216 |
MsG0880042893.01.T02 | MTR_7g118260 | 36.498 | 474 | 230 | 15 | 232 | 654 | 97 | 550 | 3.69e-62 | 217 |
MsG0880042893.01.T02 | MTR_7g118260 | 51.250 | 160 | 54 | 1 | 29 | 188 | 8 | 143 | 2.52e-44 | 167 |
MsG0880042893.01.T02 | MTR_4g061360 | 43.182 | 176 | 76 | 1 | 5 | 180 | 59 | 210 | 1.47e-41 | 162 |
MsG0880042893.01.T02 | MTR_4g061360 | 66.071 | 56 | 19 | 0 | 599 | 654 | 712 | 767 | 2.37e-15 | 80.5 |
MsG0880042893.01.T02 | MTR_1g067110 | 46.835 | 158 | 60 | 1 | 23 | 180 | 73 | 206 | 9.21e-41 | 159 |
MsG0880042893.01.T02 | MTR_1g067110 | 46.835 | 158 | 60 | 1 | 23 | 180 | 73 | 206 | 1.16e-40 | 159 |
MsG0880042893.01.T02 | MTR_4g108880 | 32.895 | 152 | 78 | 1 | 29 | 180 | 27 | 154 | 5.06e-22 | 100 |
MsG0880042893.01.T02 | MTR_4g108880 | 71.111 | 45 | 13 | 0 | 607 | 651 | 504 | 548 | 4.19e-13 | 72.8 |
MsG0880042893.01.T02 | MTR_3g037390 | 33.537 | 164 | 79 | 2 | 17 | 180 | 12 | 145 | 9.55e-22 | 100 |
MsG0880042893.01.T02 | MTR_3g037390 | 66.667 | 45 | 15 | 0 | 607 | 651 | 497 | 541 | 9.73e-12 | 68.6 |
MsG0880042893.01.T02 | MTR_4g131580 | 32.877 | 146 | 71 | 3 | 37 | 182 | 23 | 141 | 1.44e-18 | 90.1 |
MsG0880042893.01.T02 | MTR_4g131570 | 34.247 | 146 | 69 | 3 | 37 | 182 | 23 | 141 | 3.51e-18 | 89.0 |
MsG0880042893.01.T02 | MTR_1g013170 | 29.688 | 192 | 97 | 4 | 37 | 228 | 11 | 164 | 9.56e-17 | 84.0 |
MsG0880042893.01.T02 | MTR_1g032570 | 36.111 | 144 | 65 | 4 | 37 | 180 | 17 | 133 | 1.20e-16 | 84.3 |
MsG0880042893.01.T02 | MTR_2g450070 | 29.697 | 165 | 85 | 4 | 16 | 180 | 7 | 140 | 9.37e-16 | 81.6 |
MsG0880042893.01.T02 | MTR_2g450070 | 29.697 | 165 | 85 | 4 | 16 | 180 | 7 | 140 | 9.66e-16 | 81.3 |
MsG0880042893.01.T02 | MTR_3g106220 | 28.977 | 176 | 90 | 3 | 37 | 204 | 14 | 162 | 1.60e-15 | 80.9 |
MsG0880042893.01.T02 | MTR_3g086100 | 30.380 | 158 | 75 | 6 | 31 | 182 | 9 | 137 | 1.94e-14 | 77.0 |
MsG0880042893.01.T02 | MTR_4g121020 | 31.507 | 146 | 69 | 4 | 37 | 180 | 37 | 153 | 2.10e-14 | 77.0 |
MsG0880042893.01.T02 | MTR_4g121020 | 30.556 | 144 | 73 | 2 | 37 | 180 | 37 | 153 | 2.23e-14 | 77.0 |
MsG0880042893.01.T02 | MTR_1g067110 | 73.171 | 41 | 11 | 0 | 140 | 180 | 1 | 41 | 2.31e-14 | 77.0 |
MsG0880042893.01.T02 | MTR_2g034960 | 30.137 | 146 | 75 | 2 | 35 | 180 | 33 | 151 | 8.26e-14 | 75.1 |
MsG0880042893.01.T02 | MTR_4g131600 | 30.137 | 146 | 75 | 3 | 37 | 182 | 26 | 144 | 1.04e-13 | 74.7 |
MsG0880042893.01.T02 | MTR_8g079940 | 30.667 | 150 | 73 | 5 | 35 | 182 | 29 | 149 | 2.46e-13 | 73.6 |
MsG0880042893.01.T02 | MTR_3g102600 | 32.867 | 143 | 69 | 2 | 37 | 179 | 14 | 129 | 2.94e-13 | 69.3 |
MsG0880042893.01.T02 | MTR_7g117705 | 28.497 | 193 | 99 | 5 | 37 | 228 | 11 | 165 | 2.98e-13 | 72.8 |
MsG0880042893.01.T02 | MTR_3g102600 | 32.867 | 143 | 69 | 2 | 37 | 179 | 14 | 129 | 3.15e-13 | 70.1 |
MsG0880042893.01.T02 | MTR_1g013180 | 28.859 | 149 | 79 | 2 | 37 | 185 | 162 | 283 | 4.58e-13 | 72.8 |
MsG0880042893.01.T02 | MTR_7g490310 | 27.329 | 161 | 75 | 2 | 37 | 179 | 11 | 147 | 8.78e-13 | 68.9 |
MsG0880042893.01.T02 | MTR_3g037390 | 66.667 | 45 | 15 | 0 | 607 | 651 | 393 | 437 | 5.50e-12 | 68.9 |
MsG0880042893.01.T01 | MTR_8g024260 | 89.655 | 667 | 41 | 4 | 1 | 666 | 1 | 640 | 0.0 | 1149 |
MsG0880042893.01.T01 | MTR_7g118260 | 40.639 | 657 | 282 | 19 | 29 | 654 | 8 | 587 | 2.35e-126 | 387 |
MsG0880042893.01.T01 | MTR_3g092780 | 34.819 | 718 | 317 | 26 | 22 | 666 | 43 | 682 | 1.10e-92 | 301 |
MsG0880042893.01.T01 | MTR_3g092780 | 34.771 | 719 | 317 | 26 | 22 | 666 | 43 | 683 | 1.60e-92 | 301 |
MsG0880042893.01.T01 | MTR_3g092780 | 33.809 | 701 | 306 | 21 | 22 | 666 | 43 | 641 | 6.42e-89 | 290 |
MsG0880042893.01.T01 | MTR_3g092780 | 33.761 | 702 | 306 | 21 | 22 | 666 | 43 | 642 | 7.31e-89 | 290 |
MsG0880042893.01.T01 | MTR_7g118260 | 37.773 | 503 | 240 | 17 | 183 | 654 | 41 | 501 | 3.98e-70 | 237 |
MsG0880042893.01.T01 | MTR_7g118260 | 37.986 | 437 | 200 | 15 | 269 | 654 | 1 | 417 | 2.51e-63 | 216 |
MsG0880042893.01.T01 | MTR_7g118260 | 36.498 | 474 | 230 | 15 | 232 | 654 | 97 | 550 | 3.69e-62 | 217 |
MsG0880042893.01.T01 | MTR_7g118260 | 51.250 | 160 | 54 | 1 | 29 | 188 | 8 | 143 | 2.52e-44 | 167 |
MsG0880042893.01.T01 | MTR_4g061360 | 43.182 | 176 | 76 | 1 | 5 | 180 | 59 | 210 | 1.47e-41 | 162 |
MsG0880042893.01.T01 | MTR_4g061360 | 66.071 | 56 | 19 | 0 | 599 | 654 | 712 | 767 | 2.37e-15 | 80.5 |
MsG0880042893.01.T01 | MTR_1g067110 | 46.835 | 158 | 60 | 1 | 23 | 180 | 73 | 206 | 9.21e-41 | 159 |
MsG0880042893.01.T01 | MTR_1g067110 | 46.835 | 158 | 60 | 1 | 23 | 180 | 73 | 206 | 1.16e-40 | 159 |
MsG0880042893.01.T01 | MTR_4g108880 | 32.895 | 152 | 78 | 1 | 29 | 180 | 27 | 154 | 5.06e-22 | 100 |
MsG0880042893.01.T01 | MTR_4g108880 | 71.111 | 45 | 13 | 0 | 607 | 651 | 504 | 548 | 4.19e-13 | 72.8 |
MsG0880042893.01.T01 | MTR_3g037390 | 33.537 | 164 | 79 | 2 | 17 | 180 | 12 | 145 | 9.55e-22 | 100 |
MsG0880042893.01.T01 | MTR_3g037390 | 66.667 | 45 | 15 | 0 | 607 | 651 | 497 | 541 | 9.73e-12 | 68.6 |
MsG0880042893.01.T01 | MTR_4g131580 | 32.877 | 146 | 71 | 3 | 37 | 182 | 23 | 141 | 1.44e-18 | 90.1 |
MsG0880042893.01.T01 | MTR_4g131570 | 34.247 | 146 | 69 | 3 | 37 | 182 | 23 | 141 | 3.51e-18 | 89.0 |
MsG0880042893.01.T01 | MTR_1g013170 | 29.688 | 192 | 97 | 4 | 37 | 228 | 11 | 164 | 9.56e-17 | 84.0 |
MsG0880042893.01.T01 | MTR_1g032570 | 36.111 | 144 | 65 | 4 | 37 | 180 | 17 | 133 | 1.20e-16 | 84.3 |
MsG0880042893.01.T01 | MTR_2g450070 | 29.697 | 165 | 85 | 4 | 16 | 180 | 7 | 140 | 9.37e-16 | 81.6 |
MsG0880042893.01.T01 | MTR_2g450070 | 29.697 | 165 | 85 | 4 | 16 | 180 | 7 | 140 | 9.66e-16 | 81.3 |
MsG0880042893.01.T01 | MTR_3g106220 | 28.977 | 176 | 90 | 3 | 37 | 204 | 14 | 162 | 1.60e-15 | 80.9 |
MsG0880042893.01.T01 | MTR_3g086100 | 30.380 | 158 | 75 | 6 | 31 | 182 | 9 | 137 | 1.94e-14 | 77.0 |
MsG0880042893.01.T01 | MTR_4g121020 | 31.507 | 146 | 69 | 4 | 37 | 180 | 37 | 153 | 2.10e-14 | 77.0 |
MsG0880042893.01.T01 | MTR_4g121020 | 30.556 | 144 | 73 | 2 | 37 | 180 | 37 | 153 | 2.23e-14 | 77.0 |
MsG0880042893.01.T01 | MTR_1g067110 | 73.171 | 41 | 11 | 0 | 140 | 180 | 1 | 41 | 2.31e-14 | 77.0 |
MsG0880042893.01.T01 | MTR_2g034960 | 30.137 | 146 | 75 | 2 | 35 | 180 | 33 | 151 | 8.26e-14 | 75.1 |
MsG0880042893.01.T01 | MTR_4g131600 | 30.137 | 146 | 75 | 3 | 37 | 182 | 26 | 144 | 1.04e-13 | 74.7 |
MsG0880042893.01.T01 | MTR_8g079940 | 30.667 | 150 | 73 | 5 | 35 | 182 | 29 | 149 | 2.46e-13 | 73.6 |
MsG0880042893.01.T01 | MTR_3g102600 | 32.867 | 143 | 69 | 2 | 37 | 179 | 14 | 129 | 2.94e-13 | 69.3 |
MsG0880042893.01.T01 | MTR_7g117705 | 28.497 | 193 | 99 | 5 | 37 | 228 | 11 | 165 | 2.98e-13 | 72.8 |
MsG0880042893.01.T01 | MTR_3g102600 | 32.867 | 143 | 69 | 2 | 37 | 179 | 14 | 129 | 3.15e-13 | 70.1 |
MsG0880042893.01.T01 | MTR_1g013180 | 28.859 | 149 | 79 | 2 | 37 | 185 | 162 | 283 | 4.58e-13 | 72.8 |
MsG0880042893.01.T01 | MTR_7g490310 | 27.329 | 161 | 75 | 2 | 37 | 179 | 11 | 147 | 8.78e-13 | 68.9 |
MsG0880042893.01.T01 | MTR_3g037390 | 66.667 | 45 | 15 | 0 | 607 | 651 | 393 | 437 | 5.50e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042893.01.T02 | AT2G46790 | 52.023 | 173 | 59 | 1 | 11 | 183 | 13 | 161 | 1.27e-53 | 191 |
MsG0880042893.01.T02 | AT2G46790 | 52.023 | 173 | 59 | 1 | 11 | 183 | 13 | 161 | 1.71e-53 | 191 |
MsG0880042893.01.T02 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 415 | 463 | 1.82e-17 | 86.3 |
MsG0880042893.01.T02 | AT5G24470 | 52.469 | 162 | 53 | 1 | 21 | 182 | 36 | 173 | 7.67e-52 | 188 |
MsG0880042893.01.T02 | AT5G24470 | 55.844 | 77 | 34 | 0 | 581 | 657 | 482 | 558 | 4.04e-18 | 88.6 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.80e-42 | 158 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.80e-42 | 158 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.80e-42 | 158 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 7.89e-42 | 159 |
MsG0880042893.01.T02 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 434 | 488 | 2.11e-17 | 86.3 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 7.89e-42 | 159 |
MsG0880042893.01.T02 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 434 | 488 | 2.11e-17 | 86.3 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 7.89e-42 | 159 |
MsG0880042893.01.T02 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 434 | 488 | 2.11e-17 | 86.3 |
MsG0880042893.01.T02 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.49e-41 | 157 |
MsG0880042893.01.T02 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 461 | 515 | 2.25e-17 | 86.3 |
MsG0880042893.01.T02 | AT5G02810 | 45.806 | 155 | 60 | 1 | 26 | 180 | 69 | 199 | 8.16e-38 | 150 |
MsG0880042893.01.T02 | AT5G61380 | 32.895 | 152 | 78 | 1 | 29 | 180 | 13 | 140 | 3.31e-22 | 101 |
MsG0880042893.01.T02 | AT5G61380 | 66.667 | 45 | 15 | 0 | 607 | 651 | 532 | 576 | 9.51e-12 | 68.6 |
MsG0880042893.01.T02 | AT2G46670 | 83.673 | 49 | 8 | 0 | 606 | 654 | 130 | 178 | 7.26e-19 | 85.5 |
MsG0880042893.01.T02 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 258 | 306 | 3.73e-18 | 86.3 |
MsG0880042893.01.T02 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 258 | 306 | 3.73e-18 | 86.3 |
MsG0880042893.01.T02 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 298 | 346 | 1.00e-17 | 85.9 |
MsG0880042893.01.T02 | AT2G46790 | 68.182 | 44 | 14 | 0 | 140 | 183 | 1 | 44 | 2.53e-14 | 75.5 |
MsG0880042893.01.T02 | AT2G25180 | 32.168 | 143 | 70 | 2 | 37 | 179 | 19 | 134 | 3.03e-17 | 86.3 |
MsG0880042893.01.T02 | AT4G31920 | 31.469 | 143 | 71 | 2 | 37 | 179 | 19 | 134 | 1.66e-16 | 83.6 |
MsG0880042893.01.T02 | AT3G16857 | 32.468 | 154 | 75 | 5 | 27 | 180 | 31 | 155 | 4.53e-15 | 79.3 |
MsG0880042893.01.T02 | AT3G16857 | 32.468 | 154 | 75 | 5 | 27 | 180 | 31 | 155 | 5.56e-15 | 79.0 |
MsG0880042893.01.T02 | AT5G02810 | 72.093 | 43 | 12 | 0 | 138 | 180 | 13 | 55 | 3.45e-14 | 76.3 |
MsG0880042893.01.T02 | AT2G01760 | 28.646 | 192 | 99 | 7 | 37 | 228 | 13 | 166 | 4.87e-13 | 71.6 |
MsG0880042893.01.T02 | AT5G58080 | 30.822 | 146 | 73 | 2 | 37 | 182 | 20 | 137 | 8.53e-13 | 72.0 |
MsG0880042893.01.T02 | AT1G67710 | 29.801 | 151 | 75 | 5 | 34 | 182 | 10 | 131 | 2.87e-12 | 70.1 |
MsG0880042893.01.T02 | AT3G57040 | 24.862 | 181 | 91 | 3 | 37 | 196 | 11 | 167 | 5.37e-11 | 63.5 |
MsG0880042893.01.T02 | AT3G57040 | 24.862 | 181 | 91 | 3 | 37 | 196 | 11 | 167 | 5.37e-11 | 63.5 |
MsG0880042893.01.T01 | AT2G46790 | 52.023 | 173 | 59 | 1 | 11 | 183 | 13 | 161 | 1.27e-53 | 191 |
MsG0880042893.01.T01 | AT2G46790 | 52.023 | 173 | 59 | 1 | 11 | 183 | 13 | 161 | 1.71e-53 | 191 |
MsG0880042893.01.T01 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 415 | 463 | 1.82e-17 | 86.3 |
MsG0880042893.01.T01 | AT5G24470 | 52.469 | 162 | 53 | 1 | 21 | 182 | 36 | 173 | 7.67e-52 | 188 |
MsG0880042893.01.T01 | AT5G24470 | 55.844 | 77 | 34 | 0 | 581 | 657 | 482 | 558 | 4.04e-18 | 88.6 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.80e-42 | 158 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.80e-42 | 158 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.80e-42 | 158 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 7.89e-42 | 159 |
MsG0880042893.01.T01 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 434 | 488 | 2.11e-17 | 86.3 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 7.89e-42 | 159 |
MsG0880042893.01.T01 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 434 | 488 | 2.11e-17 | 86.3 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 7.89e-42 | 159 |
MsG0880042893.01.T01 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 434 | 488 | 2.11e-17 | 86.3 |
MsG0880042893.01.T01 | AT5G60100 | 48.101 | 158 | 58 | 1 | 23 | 180 | 52 | 185 | 3.49e-41 | 157 |
MsG0880042893.01.T01 | AT5G60100 | 77.193 | 57 | 11 | 1 | 600 | 656 | 461 | 515 | 2.25e-17 | 86.3 |
MsG0880042893.01.T01 | AT5G02810 | 45.806 | 155 | 60 | 1 | 26 | 180 | 69 | 199 | 8.16e-38 | 150 |
MsG0880042893.01.T01 | AT5G61380 | 32.895 | 152 | 78 | 1 | 29 | 180 | 13 | 140 | 3.31e-22 | 101 |
MsG0880042893.01.T01 | AT5G61380 | 66.667 | 45 | 15 | 0 | 607 | 651 | 532 | 576 | 9.51e-12 | 68.6 |
MsG0880042893.01.T01 | AT2G46670 | 83.673 | 49 | 8 | 0 | 606 | 654 | 130 | 178 | 7.26e-19 | 85.5 |
MsG0880042893.01.T01 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 258 | 306 | 3.73e-18 | 86.3 |
MsG0880042893.01.T01 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 258 | 306 | 3.73e-18 | 86.3 |
MsG0880042893.01.T01 | AT2G46790 | 83.673 | 49 | 8 | 0 | 606 | 654 | 298 | 346 | 1.00e-17 | 85.9 |
MsG0880042893.01.T01 | AT2G46790 | 68.182 | 44 | 14 | 0 | 140 | 183 | 1 | 44 | 2.53e-14 | 75.5 |
MsG0880042893.01.T01 | AT2G25180 | 32.168 | 143 | 70 | 2 | 37 | 179 | 19 | 134 | 3.03e-17 | 86.3 |
MsG0880042893.01.T01 | AT4G31920 | 31.469 | 143 | 71 | 2 | 37 | 179 | 19 | 134 | 1.66e-16 | 83.6 |
MsG0880042893.01.T01 | AT3G16857 | 32.468 | 154 | 75 | 5 | 27 | 180 | 31 | 155 | 4.53e-15 | 79.3 |
MsG0880042893.01.T01 | AT3G16857 | 32.468 | 154 | 75 | 5 | 27 | 180 | 31 | 155 | 5.56e-15 | 79.0 |
MsG0880042893.01.T01 | AT5G02810 | 72.093 | 43 | 12 | 0 | 138 | 180 | 13 | 55 | 3.45e-14 | 76.3 |
MsG0880042893.01.T01 | AT2G01760 | 28.646 | 192 | 99 | 7 | 37 | 228 | 13 | 166 | 4.87e-13 | 71.6 |
MsG0880042893.01.T01 | AT5G58080 | 30.822 | 146 | 73 | 2 | 37 | 182 | 20 | 137 | 8.53e-13 | 72.0 |
MsG0880042893.01.T01 | AT1G67710 | 29.801 | 151 | 75 | 5 | 34 | 182 | 10 | 131 | 2.87e-12 | 70.1 |
MsG0880042893.01.T01 | AT3G57040 | 24.862 | 181 | 91 | 3 | 37 | 196 | 11 | 167 | 5.37e-11 | 63.5 |
MsG0880042893.01.T01 | AT3G57040 | 24.862 | 181 | 91 | 3 | 37 | 196 | 11 | 167 | 5.37e-11 | 63.5 |
Find 0 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGTTTTTGATTTAATTTTA+TGG | - | Chr8:15529391-15529410 | MsG0880042893.01.T02:CDS | 10.0% |
!! | AAAATATCAAGAGAAAAATT+AGG | + | Chr8:15529011-15529030 | None:intergenic | 15.0% |
!! | ATAAACTATTAACTAAACTA+TGG | + | Chr8:15529373-15529392 | None:intergenic | 15.0% |
!! | ATTGATATTATCATTGTAAT+GGG | + | Chr8:15529657-15529676 | None:intergenic | 15.0% |
!!! | ATGTTTAATTTAGCTTTTTT+TGG | - | Chr8:15530685-15530704 | MsG0880042893.01.T02:CDS | 15.0% |
!! | AAAACAAATGAGTCAAAAAA+TGG | - | Chr8:15531659-15531678 | MsG0880042893.01.T02:intron | 20.0% |
!! | AAATAAACTTACCTTTGTAA+TGG | + | Chr8:15529329-15529348 | None:intergenic | 20.0% |
!! | ACATCAAGATTAAGAATAAA+CGG | + | Chr8:15529946-15529965 | None:intergenic | 20.0% |
!! | ACTAAAAATGTGAAAAGAAA+AGG | + | Chr8:15531576-15531595 | None:intergenic | 20.0% |
!! | ATTAAACATTAATCACTTCA+CGG | + | Chr8:15530674-15530693 | None:intergenic | 20.0% |
!! | CATTGATATTATCATTGTAA+TGG | + | Chr8:15529658-15529677 | None:intergenic | 20.0% |
!! | CTAAAAATGTGAAAAGAAAA+GGG | + | Chr8:15531575-15531594 | None:intergenic | 20.0% |
!! | GAAAAATTTCTTTCTACATA+AGG | - | Chr8:15530796-15530815 | MsG0880042893.01.T02:CDS | 20.0% |
!! | TAACTATGATTCAATTAGTT+TGG | - | Chr8:15532874-15532893 | MsG0880042893.01.T02:intron | 20.0% |
!! | TACATATACGTTAAATTTCT+AGG | + | Chr8:15530387-15530406 | None:intergenic | 20.0% |
!! | TAGCTATATTTACCATAATT+AGG | + | Chr8:15531832-15531851 | None:intergenic | 20.0% |
!! | TATTATCTATGTAGTTATTG+CGG | - | Chr8:15529744-15529763 | MsG0880042893.01.T02:CDS | 20.0% |
!! | TTTATTTATCTTCATGTTGT+TGG | - | Chr8:15529342-15529361 | MsG0880042893.01.T02:CDS | 20.0% |
!!! | AACTATGATTCAATTAGTTT+GGG | - | Chr8:15532875-15532894 | MsG0880042893.01.T02:intron | 20.0% |
!!! | TGTTATTTATACAGATTAAC+AGG | - | Chr8:15530434-15530453 | MsG0880042893.01.T02:intron | 20.0% |
!!! | TTCTTTTTCAAAATCAAACT+TGG | + | Chr8:15531433-15531452 | None:intergenic | 20.0% |
!!! | TTTTTTCTTCTAATAATGAC+CGG | - | Chr8:15532127-15532146 | MsG0880042893.01.T02:CDS | 20.0% |
! | GAAAATACTGAGTTTGAATT+TGG | - | Chr8:15529568-15529587 | MsG0880042893.01.T02:CDS | 25.0% |
! | GAAATAAGCATACTTATAAC+AGG | + | Chr8:15529913-15529932 | None:intergenic | 25.0% |
! | TACAAATGTATCCTTGAAAA+GGG | - | Chr8:15530091-15530110 | MsG0880042893.01.T02:intron | 25.0% |
! | TGTTACTGAAAAAACTGATT+TGG | - | Chr8:15532507-15532526 | MsG0880042893.01.T02:intron | 25.0% |
! | TTAAAATTCACCTCATTCTT+AGG | + | Chr8:15529045-15529064 | None:intergenic | 25.0% |
! | TTACAAATGTATCCTTGAAA+AGG | - | Chr8:15530090-15530109 | MsG0880042893.01.T02:intron | 25.0% |
!! | ATTTCACTCATTTTCTTCTT+TGG | - | Chr8:15531050-15531069 | MsG0880042893.01.T02:CDS | 25.0% |
!! | CAATCTAAATGCATCATTTT+TGG | - | Chr8:15530633-15530652 | MsG0880042893.01.T02:CDS | 25.0% |
!! | CTTTTAAATTGACAGATTCA+AGG | - | Chr8:15531193-15531212 | MsG0880042893.01.T02:intron | 25.0% |
!!! | AAATATGCACACATTAGTTT+TGG | + | Chr8:15529529-15529548 | None:intergenic | 25.0% |
!!! | AGAACAGTAACATTTTTTCT+TGG | + | Chr8:15529249-15529268 | None:intergenic | 25.0% |
!!! | AGCTCTAAATATTTCACTTT+TGG | + | Chr8:15531253-15531272 | None:intergenic | 25.0% |
!!! | ATTTCTTAAGCTTTAACTTG+TGG | + | Chr8:15530060-15530079 | None:intergenic | 25.0% |
!!! | GCTCTAAATATTTCACTTTT+GGG | + | Chr8:15531252-15531271 | None:intergenic | 25.0% |
!!! | GTTTGATTTTGAAAAAGAAC+TGG | - | Chr8:15531434-15531453 | MsG0880042893.01.T02:CDS | 25.0% |
!!! | TCTTTAAGAAGTGATTTTTC+TGG | - | Chr8:15531462-15531481 | MsG0880042893.01.T02:CDS | 25.0% |
!!! | TCTTTTTGGCAATTTGATTT+AGG | + | Chr8:15532376-15532395 | None:intergenic | 25.0% |
AAGAGGATGGTGTATTTAAA+TGG | - | Chr8:15529211-15529230 | MsG0880042893.01.T02:CDS | 30.0% | |
AAGGAAATCCATTGTACTAA+TGG | - | Chr8:15531396-15531415 | MsG0880042893.01.T02:intron | 30.0% | |
AATAGAAGAGAAGAAGAAAG+AGG | - | Chr8:15529194-15529213 | MsG0880042893.01.T02:intron | 30.0% | |
AATTCAAGAACTTCTAGTGA+TGG | - | Chr8:15532652-15532671 | MsG0880042893.01.T02:intron | 30.0% | |
ACATTCTTAGCATCAGAAAA+TGG | + | Chr8:15530891-15530910 | None:intergenic | 30.0% | |
ACTAAGCATAATGATGAAAC+AGG | - | Chr8:15531017-15531036 | MsG0880042893.01.T02:CDS | 30.0% | |
AGAGGATGGTGTATTTAAAT+GGG | - | Chr8:15529212-15529231 | MsG0880042893.01.T02:CDS | 30.0% | |
AGGAAATCCATTGTACTAAT+GGG | - | Chr8:15531397-15531416 | MsG0880042893.01.T02:intron | 30.0% | |
ATTAAGCAACATTGATGTGT+TGG | - | Chr8:15530959-15530978 | MsG0880042893.01.T02:intron | 30.0% | |
CTCAATAATTGCCATTACAA+AGG | - | Chr8:15529315-15529334 | MsG0880042893.01.T02:CDS | 30.0% | |
GAAAAAGGTAATATGACTAG+TGG | - | Chr8:15532819-15532838 | MsG0880042893.01.T02:CDS | 30.0% | |
GCTGAAGGCTAATTTATTAA+TGG | - | Chr8:15529718-15529737 | MsG0880042893.01.T02:CDS | 30.0% | |
GTGTATGAAATGTAGCTTAT+TGG | - | Chr8:15529130-15529149 | MsG0880042893.01.T02:intron | 30.0% | |
TGATATGAAAACACAAAAGC+AGG | - | Chr8:15531603-15531622 | MsG0880042893.01.T02:intron | 30.0% | |
TGATCTCGTATTAACAGAAA+TGG | - | Chr8:15529819-15529838 | MsG0880042893.01.T02:CDS | 30.0% | |
TGATGCTAAGAATGTATACA+TGG | - | Chr8:15530896-15530915 | MsG0880042893.01.T02:intron | 30.0% | |
TGCACTTCTTTCGTTAATTA+TGG | - | Chr8:15529864-15529883 | MsG0880042893.01.T02:intron | 30.0% | |
TTAATTATGGAGCATGAAGT+TGG | - | Chr8:15529877-15529896 | MsG0880042893.01.T02:intron | 30.0% | |
TTACCTAGATATAGAAGACT+AGG | + | Chr8:15531741-15531760 | None:intergenic | 30.0% | |
TTATCAGAGCAACCTAATTA+TGG | - | Chr8:15531817-15531836 | MsG0880042893.01.T02:CDS | 30.0% | |
TTCTATGAATCATGAATCTC+AGG | + | Chr8:15530141-15530160 | None:intergenic | 30.0% | |
! | ACTGCATGTAAAAATTTTGC+CGG | + | Chr8:15532149-15532168 | None:intergenic | 30.0% |
! | ATCTCTTCAATCTGAAATGT+CGG | + | Chr8:15529444-15529463 | None:intergenic | 30.0% |
! | ATCTTTTAGACCAAATCACT+TGG | + | Chr8:15531774-15531793 | None:intergenic | 30.0% |
! | ATTTTATCCACCTAAGAATG+AGG | - | Chr8:15529032-15529051 | MsG0880042893.01.T02:CDS | 30.0% |
! | ATTTTCTTATCAAACCTGTC+CGG | - | Chr8:15530261-15530280 | MsG0880042893.01.T02:intron | 30.0% |
! | ATTTTTACATGCAGTTATGC+TGG | - | Chr8:15532154-15532173 | MsG0880042893.01.T02:CDS | 30.0% |
! | TGATCCTCTTTCAATTTTGT+TGG | + | Chr8:15530997-15531016 | None:intergenic | 30.0% |
! | TGTTACATTTTCCCTTTTCA+AGG | + | Chr8:15530105-15530124 | None:intergenic | 30.0% |
! | TTTGTGCAGATGTTGTATTT+TGG | + | Chr8:15530465-15530484 | None:intergenic | 30.0% |
!! | AGACTTGTTAGAATTCCAAT+TGG | + | Chr8:15532212-15532231 | None:intergenic | 30.0% |
!!! | ACTTGTGCTTGTTTTAATCT+CGG | - | Chr8:15530406-15530425 | MsG0880042893.01.T02:intron | 30.0% |
AAATTCACCTCATTCTTAGG+TGG | + | Chr8:15529042-15529061 | None:intergenic | 35.0% | |
AAGCATAATGATGAAACAGG+AGG | - | Chr8:15531020-15531039 | MsG0880042893.01.T02:CDS | 35.0% | |
AAGCTGATTACCAAGTGATT+TGG | - | Chr8:15531761-15531780 | MsG0880042893.01.T02:CDS | 35.0% | |
AAGGGAAAATGTAACAGTCA+TGG | - | Chr8:15530109-15530128 | MsG0880042893.01.T02:intron | 35.0% | |
ACTAGTGGTATAGCTTCTTT+AGG | - | Chr8:15532834-15532853 | MsG0880042893.01.T02:CDS | 35.0% | |
AGAATGAGCTTACGAACTTA+TGG | - | Chr8:15530285-15530304 | MsG0880042893.01.T02:intron | 35.0% | |
ATTAACAGAAATGGAGTTGC+CGG | - | Chr8:15529828-15529847 | MsG0880042893.01.T02:CDS | 35.0% | |
ATTAATAGTCGTGCCAATGT+TGG | - | Chr8:15532601-15532620 | MsG0880042893.01.T02:intron | 35.0% | |
ATTACTACATCCACGTATCT+CGG | + | Chr8:15531307-15531326 | None:intergenic | 35.0% | |
CACTTCTTCAAAACTCCAAT+TGG | - | Chr8:15532194-15532213 | MsG0880042893.01.T02:CDS | 35.0% | |
CTATGAGATGAGTTTATAGG+TGG | + | Chr8:15530611-15530630 | None:intergenic | 35.0% | |
CTTTATCCCCATTAGTACAA+TGG | + | Chr8:15531407-15531426 | None:intergenic | 35.0% | |
GAGTCCAACAAAATTGAAAG+AGG | - | Chr8:15530990-15531009 | MsG0880042893.01.T02:CDS | 35.0% | |
GCACTATGAGATGAGTTTAT+AGG | + | Chr8:15530614-15530633 | None:intergenic | 35.0% | |
GGAAATCCATTGTACTAATG+GGG | - | Chr8:15531398-15531417 | MsG0880042893.01.T02:intron | 35.0% | |
GTAATGAAGTGCATGTGTAA+AGG | - | Chr8:15530230-15530249 | MsG0880042893.01.T02:intron | 35.0% | |
GTAGTTATTGCGGTTTCTAA+TGG | - | Chr8:15529754-15529773 | MsG0880042893.01.T02:CDS | 35.0% | |
GTATCTCGGTATCAATATCA+GGG | + | Chr8:15531293-15531312 | None:intergenic | 35.0% | |
TAATTGTGAGAGCCTTAGTA+TGG | - | Chr8:15531793-15531812 | MsG0880042893.01.T02:CDS | 35.0% | |
TGAATTGTGACTTTCAGGAT+TGG | + | Chr8:15532434-15532453 | None:intergenic | 35.0% | |
TGCTCTGATAAACCATACTA+AGG | + | Chr8:15531808-15531827 | None:intergenic | 35.0% | |
TTAGTTGAAGTTCAAAACCG+CGG | + | Chr8:15528982-15529001 | None:intergenic | 35.0% | |
TTCCTTAAGCTAAGTGACTT+AGG | + | Chr8:15530779-15530798 | None:intergenic | 35.0% | |
TTCTCATGATTCACGTAGTA+CGG | - | Chr8:15530208-15530227 | MsG0880042893.01.T02:intron | 35.0% | |
! | AAGAAGTGCAAATCCAGATA+TGG | + | Chr8:15529854-15529873 | None:intergenic | 35.0% |
! | AGTACAATGGATTTCCTTAG+TGG | + | Chr8:15531394-15531413 | None:intergenic | 35.0% |
! | ATTCTAACAGTTTTCGCTCA+TGG | - | Chr8:15530170-15530189 | MsG0880042893.01.T02:intron | 35.0% |
! | GGTAATTGTTTTCAGTATGC+TGG | - | Chr8:15532256-15532275 | MsG0880042893.01.T02:intron | 35.0% |
! | GTACAATGGATTTCCTTAGT+GGG | + | Chr8:15531393-15531412 | None:intergenic | 35.0% |
! | TCGACTTGATTTCCACATTT+GGG | - | Chr8:15531355-15531374 | MsG0880042893.01.T02:intron | 35.0% |
! | TGTCTTCTGTCGCAATTTTA+AGG | + | Chr8:15530492-15530511 | None:intergenic | 35.0% |
! | TGTTCTGAATTGTGACTTTC+AGG | + | Chr8:15532439-15532458 | None:intergenic | 35.0% |
! | TTCTAACAGTTTTCGCTCAT+GGG | - | Chr8:15530171-15530190 | MsG0880042893.01.T02:intron | 35.0% |
! | TTCTAATGGATCAAAGGCAT+GGG | - | Chr8:15529768-15529787 | MsG0880042893.01.T02:CDS | 35.0% |
! | TTTCTAATGGATCAAAGGCA+TGG | - | Chr8:15529767-15529786 | MsG0880042893.01.T02:CDS | 35.0% |
!! | GCATTCATCATTTTTCTGTG+AGG | + | Chr8:15530557-15530576 | None:intergenic | 35.0% |
!! | GTATGCTGGCTCAATTAAAA+TGG | - | Chr8:15532270-15532289 | MsG0880042893.01.T02:intron | 35.0% |
!! | TTCTAGGACAAGATCAAAGA+AGG | + | Chr8:15530371-15530390 | None:intergenic | 35.0% |
!!! | CAATTGGAGTTTTGAAGAAG+TGG | + | Chr8:15532196-15532215 | None:intergenic | 35.0% |
AAATATGACCACTGCAGTCA+TGG | - | Chr8:15532294-15532313 | MsG0880042893.01.T02:intron | 40.0% | |
AATGGGTCTCAGAAACTCAA+AGG | + | Chr8:15529640-15529659 | None:intergenic | 40.0% | |
ACAAGCAAGTGAAACAACTG+AGG | - | Chr8:15531497-15531516 | MsG0880042893.01.T02:CDS | 40.0% | |
AGAGAGATGCTTCGAGAAAA+AGG | - | Chr8:15532804-15532823 | MsG0880042893.01.T02:CDS | 40.0% | |
AGTTCGTAAGCTCATTCTTC+CGG | + | Chr8:15530283-15530302 | None:intergenic | 40.0% | |
ATATCAGAGCCGGAAAAAAC+AGG | - | Chr8:15532956-15532975 | MsG0880042893.01.T02:intron | 40.0% | |
ATCACTTCACGGAACACATA+AGG | + | Chr8:15530663-15530682 | None:intergenic | 40.0% | |
ATGGCTCAGTATGAACAACT+TGG | - | Chr8:15532313-15532332 | MsG0880042893.01.T02:intron | 40.0% | |
ATGGGTCTCAGAAACTCAAA+GGG | + | Chr8:15529639-15529658 | None:intergenic | 40.0% | |
CAAGAACTTCTAGTGATGGT+AGG | - | Chr8:15532656-15532675 | MsG0880042893.01.T02:intron | 40.0% | |
CAAGTGAAACAACTGAGGAA+TGG | - | Chr8:15531502-15531521 | MsG0880042893.01.T02:CDS | 40.0% | |
CATATGGAGATTCCCAAATG+TGG | + | Chr8:15531370-15531389 | None:intergenic | 40.0% | |
CATTTGCATTAGAAGCTGCA+TGG | - | Chr8:15531160-15531179 | MsG0880042893.01.T02:intron | 40.0% | |
CCAAATGTAGATGCTAGTAG+TGG | - | Chr8:15533038-15533057 | MsG0880042893.01.T02:five_prime_UTR | 40.0% | |
CCACTACTAGCATCTACATT+TGG | + | Chr8:15533041-15533060 | None:intergenic | 40.0% | |
CGTATCTCGGTATCAATATC+AGG | + | Chr8:15531294-15531313 | None:intergenic | 40.0% | |
CTCCTAAGTCACTTAGCTTA+AGG | - | Chr8:15530774-15530793 | MsG0880042893.01.T02:CDS | 40.0% | |
CTTCGTTCATCAGCAATCAA+TGG | - | Chr8:15531887-15531906 | MsG0880042893.01.T02:intron | 40.0% | |
GAACTATCTGTAGTTACTGC+TGG | - | Chr8:15532235-15532254 | MsG0880042893.01.T02:CDS | 40.0% | |
GAAGAGAAGAAGAAAGAGGA+TGG | - | Chr8:15529198-15529217 | MsG0880042893.01.T02:CDS | 40.0% | |
GATATTGATACCGAGATACG+TGG | - | Chr8:15531294-15531313 | MsG0880042893.01.T02:intron | 40.0% | |
GTTTGGGAACTCCTATATCA+TGG | - | Chr8:15532891-15532910 | MsG0880042893.01.T02:intron | 40.0% | |
TCTGTAGTCAGCCATGATAT+AGG | + | Chr8:15532905-15532924 | None:intergenic | 40.0% | |
TGAAATAGCCTCTCCAACAT+TGG | + | Chr8:15532617-15532636 | None:intergenic | 40.0% | |
TTTACATGCAGTTATGCTGG+CGG | - | Chr8:15532157-15532176 | MsG0880042893.01.T02:CDS | 40.0% | |
! | AAGCAGAGAGAGAAAAGTGT+GGG | + | Chr8:15530718-15530737 | None:intergenic | 40.0% |
! | CATTGATTGCTGATGAACGA+AGG | + | Chr8:15531889-15531908 | None:intergenic | 40.0% |
! | GATATTTTCAGCGTTTTCCG+CGG | - | Chr8:15528962-15528981 | MsG0880042893.01.T02:CDS | 40.0% |
! | GCTCCTAGTCTTCTATATCT+AGG | - | Chr8:15531735-15531754 | MsG0880042893.01.T02:CDS | 40.0% |
! | TGCGGTTTCTAATGGATCAA+AGG | - | Chr8:15529762-15529781 | MsG0880042893.01.T02:CDS | 40.0% |
! | TGGAGAGGCTATTTCAAATG+CGG | - | Chr8:15532621-15532640 | MsG0880042893.01.T02:intron | 40.0% |
! | TGGTTTTCGGTTGATCTTGA+CGG | - | Chr8:15529502-15529521 | MsG0880042893.01.T02:CDS | 40.0% |
! | TTGAATCTGATCGTGCTACT+CGG | - | Chr8:15529274-15529293 | MsG0880042893.01.T02:CDS | 40.0% |
!! | AATGCTCTGATTTGTTGCAC+AGG | - | Chr8:15532929-15532948 | MsG0880042893.01.T02:intron | 40.0% |
!! | GCAGATGTTGTATTTTGGAG+AGG | + | Chr8:15530460-15530479 | None:intergenic | 40.0% |
!! | GTCGACTTGATTTCCACATT+TGG | - | Chr8:15531354-15531373 | MsG0880042893.01.T02:intron | 40.0% |
!!! | TAGTCGATGACACTGGTTTT+CGG | - | Chr8:15529489-15529508 | MsG0880042893.01.T02:CDS | 40.0% |
ACAGAACTCTTCGTCTGACA+GGG | + | Chr8:15530936-15530955 | None:intergenic | 45.0% | |
ACCGTCTCATCTTGATCGAA+CGG | - | Chr8:15529591-15529610 | MsG0880042893.01.T02:CDS | 45.0% | |
AGTGCAAATCCAGATATGGC+CGG | + | Chr8:15529850-15529869 | None:intergenic | 45.0% | |
ATGGGAGATGATGAAGACGA+AGG | - | Chr8:15529786-15529805 | MsG0880042893.01.T02:CDS | 45.0% | |
CAAGCAGAGAGAGAAAAGTG+TGG | + | Chr8:15530719-15530738 | None:intergenic | 45.0% | |
CAGAAGCAGAATCAGTCGAT+TGG | + | Chr8:15530528-15530547 | None:intergenic | 45.0% | |
GAATCTCCATATGCCCACTA+AGG | - | Chr8:15531377-15531396 | MsG0880042893.01.T02:intron | 45.0% | |
GTGACTTTCAGGATTGGACT+GGG | + | Chr8:15532428-15532447 | None:intergenic | 45.0% | |
TAGAGCTGCTTCTCTTTGAC+TGG | + | Chr8:15532761-15532780 | None:intergenic | 45.0% | |
TCAAGGCTAGAACAAGACTG+CGG | - | Chr8:15531210-15531229 | MsG0880042893.01.T02:intron | 45.0% | |
TGTGACTTTCAGGATTGGAC+TGG | + | Chr8:15532429-15532448 | None:intergenic | 45.0% | |
! | ATCGACTGATTCTGCTTCTG+TGG | - | Chr8:15530528-15530547 | MsG0880042893.01.T02:CDS | 45.0% |
! | CACACTTTTCTCTCTCTGCT+TGG | - | Chr8:15530717-15530736 | MsG0880042893.01.T02:CDS | 45.0% |
! | GAAAGGGAGAGCTCTCTTTT+TGG | + | Chr8:15532390-15532409 | None:intergenic | 45.0% |
! | GGATTTCCTTAGTGGGCATA+TGG | + | Chr8:15531386-15531405 | None:intergenic | 45.0% |
!! | CTAGTTTCTAGCGTTGCTGA+AGG | - | Chr8:15529703-15529722 | MsG0880042893.01.T02:CDS | 45.0% |
AAACTCAAAGGGACCCGCAT+TGG | + | Chr8:15529628-15529647 | None:intergenic | 50.0% | |
AAGTCGACAGCTCTGCTAGA+AGG | + | Chr8:15531342-15531361 | None:intergenic | 50.0% | |
ATACTGAGCCATGACTGCAG+TGG | + | Chr8:15532305-15532324 | None:intergenic | 50.0% | |
ATGCTGGCGGTAAGATGTTG+CGG | - | Chr8:15532170-15532189 | MsG0880042893.01.T02:CDS | 50.0% | |
CACAGAACTCTTCGTCTGAC+AGG | + | Chr8:15530937-15530956 | None:intergenic | 50.0% | |
CACAGGTTCGATATCAGAGC+CGG | - | Chr8:15532946-15532965 | MsG0880042893.01.T02:intron | 50.0% | |
CATGTGCTCTGCACACGAAT+TGG | + | Chr8:15530861-15530880 | None:intergenic | 50.0% | |
CGAACTTATGGCAGCATGTC+TGG | - | Chr8:15530297-15530316 | MsG0880042893.01.T02:intron | 50.0% | |
GAGGAGGAACTTGAGGGAAA+GGG | + | Chr8:15532406-15532425 | None:intergenic | 50.0% | |
GCCGTTCGATCAAGATGAGA+CGG | + | Chr8:15529595-15529614 | None:intergenic | 50.0% | |
GTAAGCTCATTCTTCCGGAC+AGG | + | Chr8:15530278-15530297 | None:intergenic | 50.0% | |
GTGCATGATTCTCCTAGTGC+TGG | - | Chr8:15532538-15532557 | MsG0880042893.01.T02:intron | 50.0% | |
TAGTCGTGCCAATGTTGGAG+AGG | - | Chr8:15532606-15532625 | MsG0880042893.01.T02:intron | 50.0% | |
TTCCTCGTAGTCGATGACAC+TGG | - | Chr8:15529482-15529501 | MsG0880042893.01.T02:CDS | 50.0% | |
! | AACCAGTGTCATCGACTACG+AGG | + | Chr8:15529487-15529506 | None:intergenic | 50.0% |
! | AATCTGATCGTGCTACTCGG+AGG | - | Chr8:15529277-15529296 | MsG0880042893.01.T02:CDS | 50.0% |
! | ACTTTCAGGATTGGACTGGG+AGG | + | Chr8:15532425-15532444 | None:intergenic | 50.0% |
! | AGCAGCGTCTTCGGGTTAAA+GGG | - | Chr8:15532982-15533001 | MsG0880042893.01.T02:five_prime_UTR | 50.0% |
! | CAGATGCTTCCGCCTTTTCT+CGG | - | Chr8:15531541-15531560 | MsG0880042893.01.T02:CDS | 50.0% |
!! | AAAAGGCGGAAGCATCTGAG+TGG | + | Chr8:15531539-15531558 | None:intergenic | 50.0% |
!! | GATTCTCCTAGTGCTGGTCA+GGG | - | Chr8:15532544-15532563 | MsG0880042893.01.T02:intron | 50.0% |
!! | TGATTCTCCTAGTGCTGGTC+AGG | - | Chr8:15532543-15532562 | MsG0880042893.01.T02:intron | 50.0% |
!!! | GCTGCTCTGCCTGTTTTTTC+CGG | + | Chr8:15532968-15532987 | None:intergenic | 50.0% |
AACAGGCAGAGCAGCGTCTT+CGG | - | Chr8:15532973-15532992 | MsG0880042893.01.T02:five_prime_UTR | 55.0% | |
ATGGAGTTGCCGGCCATATC+TGG | - | Chr8:15529838-15529857 | MsG0880042893.01.T02:intron | 55.0% | |
CCAAAACCCTGACCAGCACT+AGG | + | Chr8:15532553-15532572 | None:intergenic | 55.0% | |
GACTGGGAGGAGGAACTTGA+GGG | + | Chr8:15532412-15532431 | None:intergenic | 55.0% | |
GGAGGAGGAACTTGAGGGAA+AGG | + | Chr8:15532407-15532426 | None:intergenic | 55.0% | |
! | GAGCAGCGTCTTCGGGTTAA+AGG | - | Chr8:15532981-15533000 | MsG0880042893.01.T02:five_prime_UTR | 55.0% |
! | TTCAGGATTGGACTGGGAGG+AGG | + | Chr8:15532422-15532441 | None:intergenic | 55.0% |
!!! | CCTAGTGCTGGTCAGGGTTT+TGG | - | Chr8:15532550-15532569 | MsG0880042893.01.T02:intron | 55.0% |
ACAGGCAGAGCAGCGTCTTC+GGG | - | Chr8:15532974-15532993 | MsG0880042893.01.T02:five_prime_UTR | 60.0% | |
AGGGCGAGCTCACCGAGAAA+AGG | + | Chr8:15531556-15531575 | None:intergenic | 60.0% | |
CGGCCACTGATGTGCCAATG+CGG | - | Chr8:15529611-15529630 | MsG0880042893.01.T02:CDS | 60.0% | |
GCGAGCTCACCGAGAAAAGG+CGG | + | Chr8:15531553-15531572 | None:intergenic | 60.0% | |
GGACTGGGAGGAGGAACTTG+AGG | + | Chr8:15532413-15532432 | None:intergenic | 60.0% | |
GGCCACTGATGTGCCAATGC+GGG | - | Chr8:15529612-15529631 | MsG0880042893.01.T02:CDS | 60.0% | |
! | GACCCGCATTGGCACATCAG+TGG | + | Chr8:15529617-15529636 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 15528953 | 15533070 | 15528953 | ID=MsG0880042893.01;Name=MsG0880042893.01 |
Chr8 | mRNA | 15528953 | 15533070 | 15528953 | ID=MsG0880042893.01.T01;Parent=MsG0880042893.01;Name=MsG0880042893.01.T01;_AED=0.27;_eAED=0.27;_QI=112|0.8|0.72|1|0.6|0.45|11|0|666 |
Chr8 | five_prime_UTR | 15532970 | 15533070 | 15532970 | ID=MsG0880042893.01.T01:five_prime_utr;Parent=MsG0880042893.01.T01 |
Chr8 | five_prime_UTR | 15532868 | 15532878 | 15532868 | ID=MsG0880042893.01.T01:five_prime_utr;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15532687 | 15532867 | 15532687 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15532060 | 15532265 | 15532060 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15531905 | 15531911 | 15531905 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15531692 | 15531843 | 15531692 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15531423 | 15531575 | 15531423 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15530982 | 15531150 | 15530982 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15530461 | 15530815 | 15530461 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15529198 | 15529855 | 15529198 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | CDS | 15528953 | 15529072 | 15528953 | ID=MsG0880042893.01.T01:cds;Parent=MsG0880042893.01.T01 |
Chr8 | mRNA | 15528953 | 15533070 | 15528953 | ID=MsG0880042893.01.T02;Parent=MsG0880042893.01;Name=MsG0880042893.01.T02;_AED=0.38;_eAED=0.39;_QI=112|0.77|0.7|1|0.66|0.6|10|0|666 |
Chr8 | five_prime_UTR | 15532970 | 15533070 | 15532970 | ID=MsG0880042893.01.T02:five_prime_utr;Parent=MsG0880042893.01.T02 |
Chr8 | five_prime_UTR | 15532868 | 15532878 | 15532868 | ID=MsG0880042893.01.T02:five_prime_utr;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15532687 | 15532867 | 15532687 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15532060 | 15532265 | 15532060 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15531905 | 15531911 | 15531905 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15531692 | 15531843 | 15531692 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15531423 | 15531575 | 15531423 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15530982 | 15531150 | 15530982 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15530461 | 15530815 | 15530461 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15529198 | 15529855 | 15529198 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Chr8 | CDS | 15528953 | 15529072 | 15528953 | ID=MsG0880042893.01.T02:cds;Parent=MsG0880042893.01.T02 |
Gene Sequence |
Protein sequence |