Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043103.01.T01 | XP_024629558.2 | 94.25 | 400 | 23 | 0 | 1 | 400 | 1 | 400 | 0 | 735 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043103.01.T01 | O22727 | 25.935 | 401 | 232 | 12 | 8 | 387 | 7 | 363 | 6.00E-24 | 107 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043103.01.T01 | A0A072TPM1 | 94.250 | 400 | 23 | 0 | 1 | 400 | 1 | 400 | 0.0 | 735 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0880043103.01 | MsG0880043941.01 | 0.816217 | 6.196535e-52 | 4.364503e-49 |
MsG0880043103.01 | MsG0880043942.01 | 0.801337 | 9.442309e-49 | 4.497900e-46 |
MsG0380012365.01 | MsG0880043103.01 | 0.805060 | 1.601730e-49 | 8.392255e-47 |
MsG0480023488.01 | MsG0880043103.01 | 0.816802 | 4.583511e-52 | 3.280180e-49 |
MsG0780039443.01 | MsG0880043103.01 | 0.800598 | 1.337206e-48 | 6.251612e-46 |
MsG0780040074.01 | MsG0880043103.01 | 0.812949 | 3.277327e-51 | 2.111931e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043103.01.T01 | MTR_8g028500 | 94.250 | 400 | 23 | 0 | 1 | 400 | 1 | 400 | 0.0 | 735 |
MsG0880043103.01.T01 | MTR_8g028520 | 83.698 | 411 | 51 | 3 | 4 | 400 | 5 | 413 | 0.0 | 662 |
MsG0880043103.01.T01 | MTR_2g072020 | 36.911 | 382 | 208 | 5 | 21 | 400 | 21 | 371 | 3.06e-70 | 240 |
MsG0880043103.01.T01 | MTR_2g072030 | 37.500 | 384 | 203 | 5 | 21 | 400 | 21 | 371 | 2.45e-68 | 235 |
MsG0880043103.01.T01 | MTR_2g072080 | 36.579 | 380 | 206 | 6 | 24 | 400 | 24 | 371 | 1.99e-66 | 229 |
MsG0880043103.01.T01 | MTR_2g072150 | 35.156 | 384 | 212 | 5 | 21 | 400 | 21 | 371 | 8.26e-63 | 219 |
MsG0880043103.01.T01 | MTR_2g072110 | 35.079 | 382 | 215 | 4 | 21 | 400 | 21 | 371 | 7.12e-62 | 216 |
MsG0880043103.01.T01 | MTR_2g072110 | 35.079 | 382 | 215 | 4 | 21 | 400 | 21 | 371 | 8.40e-62 | 216 |
MsG0880043103.01.T01 | MTR_2g071820 | 35.417 | 384 | 211 | 5 | 21 | 400 | 21 | 371 | 2.92e-59 | 201 |
MsG0880043103.01.T01 | MTR_2g072820 | 33.854 | 384 | 215 | 5 | 21 | 400 | 21 | 369 | 1.96e-57 | 203 |
MsG0880043103.01.T01 | MTR_1g037130 | 35.417 | 384 | 211 | 7 | 21 | 399 | 21 | 372 | 5.14e-56 | 199 |
MsG0880043103.01.T01 | MTR_1g036860 | 32.673 | 404 | 235 | 7 | 1 | 399 | 1 | 372 | 4.80e-55 | 189 |
MsG0880043103.01.T01 | MTR_2g071940 | 33.582 | 402 | 234 | 4 | 1 | 400 | 5 | 375 | 1.66e-54 | 194 |
MsG0880043103.01.T01 | MTR_0069s0040 | 34.715 | 386 | 211 | 8 | 21 | 399 | 21 | 372 | 2.52e-54 | 194 |
MsG0880043103.01.T01 | MTR_2g072090 | 33.582 | 402 | 234 | 4 | 1 | 400 | 5 | 375 | 2.82e-54 | 194 |
MsG0880043103.01.T01 | MTR_2g071870 | 33.582 | 402 | 234 | 4 | 1 | 400 | 5 | 375 | 2.94e-54 | 194 |
MsG0880043103.01.T01 | MTR_1g051585 | 34.974 | 386 | 210 | 8 | 21 | 399 | 21 | 372 | 2.99e-54 | 194 |
MsG0880043103.01.T01 | MTR_2g071850 | 33.831 | 402 | 233 | 4 | 1 | 400 | 5 | 375 | 4.86e-54 | 193 |
MsG0880043103.01.T01 | MTR_1g037150 | 33.580 | 405 | 218 | 11 | 1 | 399 | 1 | 360 | 5.33e-54 | 193 |
MsG0880043103.01.T01 | MTR_1g041550 | 35.492 | 386 | 209 | 9 | 21 | 399 | 21 | 373 | 6.77e-54 | 193 |
MsG0880043103.01.T01 | MTR_1g037010 | 34.884 | 387 | 210 | 9 | 21 | 399 | 21 | 373 | 3.03e-53 | 191 |
MsG0880043103.01.T01 | MTR_2g089975 | 32.598 | 408 | 236 | 8 | 1 | 402 | 1 | 375 | 4.24e-53 | 191 |
MsG0880043103.01.T01 | MTR_1g037250 | 33.679 | 386 | 221 | 10 | 21 | 399 | 21 | 378 | 1.10e-52 | 189 |
MsG0880043103.01.T01 | MTR_2g071900 | 34.456 | 386 | 220 | 4 | 17 | 400 | 17 | 371 | 1.26e-52 | 189 |
MsG0880043103.01.T01 | MTR_3g013790 | 33.246 | 382 | 215 | 6 | 20 | 398 | 16 | 360 | 3.19e-51 | 185 |
MsG0880043103.01.T01 | MTR_1g044020 | 32.678 | 407 | 238 | 7 | 1 | 402 | 1 | 376 | 3.21e-51 | 185 |
MsG0880043103.01.T01 | MTR_3g013790 | 33.246 | 382 | 215 | 6 | 20 | 398 | 16 | 360 | 3.61e-51 | 185 |
MsG0880043103.01.T01 | MTR_1g036800 | 33.693 | 371 | 208 | 8 | 21 | 386 | 21 | 358 | 8.75e-51 | 184 |
MsG0880043103.01.T01 | MTR_2g071890 | 33.835 | 399 | 200 | 7 | 4 | 400 | 8 | 344 | 9.18e-51 | 184 |
MsG0880043103.01.T01 | MTR_0068s0080 | 34.232 | 371 | 206 | 9 | 21 | 386 | 21 | 358 | 2.46e-50 | 182 |
MsG0880043103.01.T01 | MTR_0068s0080 | 34.232 | 371 | 206 | 9 | 21 | 386 | 21 | 358 | 3.02e-50 | 182 |
MsG0880043103.01.T01 | MTR_0006s0140 | 33.795 | 361 | 203 | 6 | 21 | 377 | 21 | 349 | 5.56e-50 | 173 |
MsG0880043103.01.T01 | MTR_2g071980 | 33.420 | 386 | 224 | 4 | 17 | 400 | 17 | 371 | 2.05e-49 | 180 |
MsG0880043103.01.T01 | MTR_6g463150 | 34.286 | 385 | 214 | 8 | 21 | 399 | 21 | 372 | 2.34e-49 | 180 |
MsG0880043103.01.T01 | MTR_0006s0240 | 32.090 | 402 | 207 | 9 | 1 | 399 | 1 | 339 | 5.27e-48 | 176 |
MsG0880043103.01.T01 | MTR_0006s0080 | 32.992 | 391 | 218 | 11 | 21 | 402 | 21 | 376 | 3.20e-47 | 174 |
MsG0880043103.01.T01 | MTR_8g059345 | 33.592 | 387 | 220 | 7 | 21 | 402 | 21 | 375 | 2.93e-46 | 171 |
MsG0880043103.01.T01 | MTR_1g050402 | 31.450 | 407 | 253 | 11 | 1 | 399 | 1 | 389 | 2.75e-45 | 168 |
MsG0880043103.01.T01 | MTR_0006s0230 | 32.115 | 383 | 197 | 8 | 21 | 399 | 21 | 344 | 7.26e-45 | 167 |
MsG0880043103.01.T01 | MTR_4g025470 | 30.829 | 386 | 225 | 13 | 27 | 399 | 3 | 359 | 2.13e-44 | 165 |
MsG0880043103.01.T01 | MTR_1g036750 | 34.302 | 344 | 182 | 11 | 65 | 399 | 33 | 341 | 7.91e-44 | 164 |
MsG0880043103.01.T01 | MTR_4g025430 | 31.525 | 387 | 221 | 13 | 27 | 399 | 3 | 359 | 3.24e-43 | 162 |
MsG0880043103.01.T01 | MTR_1g006975 | 28.467 | 411 | 250 | 9 | 1 | 399 | 1 | 379 | 1.45e-40 | 154 |
MsG0880043103.01.T01 | MTR_7g088290 | 29.630 | 405 | 239 | 11 | 4 | 400 | 12 | 378 | 1.90e-40 | 154 |
MsG0880043103.01.T01 | MTR_5g036460 | 29.630 | 405 | 242 | 9 | 2 | 399 | 47 | 415 | 4.80e-39 | 149 |
MsG0880043103.01.T01 | MTR_3g055210 | 29.750 | 400 | 229 | 8 | 4 | 399 | 9 | 360 | 6.27e-39 | 149 |
MsG0880043103.01.T01 | MTR_1g036520 | 35.433 | 254 | 162 | 2 | 21 | 274 | 21 | 272 | 1.14e-38 | 148 |
MsG0880043103.01.T01 | MTR_3g055230 | 29.136 | 405 | 231 | 10 | 8 | 399 | 9 | 370 | 1.61e-38 | 148 |
MsG0880043103.01.T01 | MTR_3g055230 | 29.136 | 405 | 231 | 10 | 8 | 399 | 9 | 370 | 1.84e-38 | 148 |
MsG0880043103.01.T01 | MTR_7g088640 | 28.467 | 411 | 250 | 9 | 1 | 399 | 1 | 379 | 2.31e-38 | 147 |
MsG0880043103.01.T01 | MTR_3g055230 | 29.136 | 405 | 231 | 10 | 8 | 399 | 9 | 370 | 1.80e-37 | 145 |
MsG0880043103.01.T01 | MTR_3g055230 | 29.136 | 405 | 231 | 10 | 8 | 399 | 9 | 370 | 2.18e-37 | 144 |
MsG0880043103.01.T01 | MTR_1g442750 | 29.199 | 387 | 203 | 9 | 21 | 402 | 21 | 341 | 6.85e-37 | 143 |
MsG0880043103.01.T01 | MTR_8g464870 | 28.148 | 405 | 243 | 9 | 4 | 399 | 5 | 370 | 4.46e-36 | 140 |
MsG0880043103.01.T01 | MTR_1g031830 | 27.136 | 398 | 229 | 10 | 15 | 400 | 63 | 411 | 5.11e-36 | 140 |
MsG0880043103.01.T01 | MTR_3g053200 | 29.540 | 413 | 229 | 10 | 4 | 398 | 2 | 370 | 1.35e-35 | 139 |
MsG0880043103.01.T01 | MTR_5g092190 | 28.571 | 406 | 234 | 8 | 1 | 400 | 6 | 361 | 5.97e-35 | 137 |
MsG0880043103.01.T01 | MTR_5g092190 | 27.575 | 301 | 166 | 7 | 107 | 399 | 1483 | 1739 | 2.66e-24 | 106 |
MsG0880043103.01.T01 | MTR_3g464870 | 28.871 | 381 | 225 | 10 | 25 | 399 | 26 | 366 | 1.87e-34 | 136 |
MsG0880043103.01.T01 | MTR_3g464870 | 28.871 | 381 | 225 | 10 | 25 | 399 | 26 | 366 | 2.26e-34 | 135 |
MsG0880043103.01.T01 | MTR_5g085400 | 28.851 | 409 | 239 | 11 | 1 | 399 | 1 | 367 | 5.55e-34 | 135 |
MsG0880043103.01.T01 | MTR_3g466620 | 28.389 | 391 | 232 | 10 | 19 | 400 | 20 | 371 | 2.34e-33 | 132 |
MsG0880043103.01.T01 | MTR_3g053180 | 29.306 | 389 | 227 | 11 | 21 | 399 | 22 | 372 | 3.77e-33 | 132 |
MsG0880043103.01.T01 | MTR_3g053180 | 29.231 | 390 | 228 | 11 | 20 | 399 | 21 | 372 | 4.16e-33 | 132 |
MsG0880043103.01.T01 | MTR_3g062320 | 26.406 | 409 | 244 | 10 | 4 | 400 | 9 | 372 | 4.88e-33 | 132 |
MsG0880043103.01.T01 | MTR_1g069615 | 34.579 | 214 | 109 | 3 | 117 | 330 | 1 | 183 | 6.02e-33 | 122 |
MsG0880043103.01.T01 | MTR_3g464920 | 27.822 | 381 | 229 | 10 | 25 | 399 | 26 | 366 | 9.01e-32 | 128 |
MsG0880043103.01.T01 | MTR_3g063010 | 26.225 | 408 | 240 | 10 | 4 | 400 | 9 | 366 | 1.37e-31 | 127 |
MsG0880043103.01.T01 | MTR_3g467340 | 27.174 | 368 | 219 | 9 | 41 | 400 | 40 | 366 | 9.08e-31 | 125 |
MsG0880043103.01.T01 | MTR_0912s0010 | 27.179 | 390 | 240 | 8 | 15 | 400 | 16 | 365 | 1.69e-30 | 122 |
MsG0880043103.01.T01 | MTR_3g464840 | 28.283 | 396 | 231 | 11 | 13 | 399 | 14 | 365 | 2.56e-30 | 124 |
MsG0880043103.01.T01 | MTR_3g464810 | 27.919 | 394 | 240 | 8 | 12 | 400 | 13 | 367 | 5.79e-30 | 123 |
MsG0880043103.01.T01 | MTR_5g092990 | 26.923 | 416 | 224 | 12 | 1 | 399 | 6 | 358 | 1.84e-29 | 120 |
MsG0880043103.01.T01 | MTR_5g092340 | 27.303 | 304 | 166 | 6 | 104 | 399 | 69 | 325 | 3.87e-29 | 119 |
MsG0880043103.01.T01 | MTR_5g092340 | 27.303 | 304 | 166 | 6 | 104 | 399 | 119 | 375 | 6.50e-29 | 118 |
MsG0880043103.01.T01 | MTR_3g048607 | 27.989 | 368 | 213 | 10 | 42 | 400 | 28 | 352 | 7.06e-29 | 119 |
MsG0880043103.01.T01 | MTR_3g062420 | 24.272 | 412 | 249 | 10 | 3 | 400 | 4 | 366 | 7.07e-29 | 119 |
MsG0880043103.01.T01 | MTR_5g092310 | 30.350 | 257 | 143 | 4 | 147 | 399 | 27 | 251 | 1.03e-28 | 116 |
MsG0880043103.01.T01 | MTR_3g466750 | 25.337 | 371 | 221 | 9 | 42 | 401 | 28 | 353 | 2.48e-28 | 118 |
MsG0880043103.01.T01 | MTR_3g062220 | 24.390 | 410 | 253 | 11 | 3 | 401 | 4 | 367 | 3.15e-28 | 117 |
MsG0880043103.01.T01 | MTR_2g075970 | 32.653 | 196 | 131 | 1 | 7 | 202 | 4 | 198 | 6.18e-28 | 109 |
MsG0880043103.01.T01 | MTR_3g466580 | 26.343 | 391 | 244 | 8 | 15 | 400 | 16 | 367 | 1.20e-27 | 115 |
MsG0880043103.01.T01 | MTR_0406s0030 | 32.510 | 243 | 159 | 4 | 1 | 240 | 1 | 241 | 1.31e-27 | 115 |
MsG0880043103.01.T01 | MTR_1g051670 | 36.735 | 196 | 123 | 1 | 21 | 216 | 21 | 215 | 1.37e-27 | 110 |
MsG0880043103.01.T01 | MTR_0043s0110 | 30.739 | 257 | 137 | 6 | 151 | 400 | 143 | 365 | 1.51e-27 | 115 |
MsG0880043103.01.T01 | MTR_3g464950 | 27.273 | 396 | 240 | 10 | 12 | 400 | 13 | 367 | 1.96e-27 | 115 |
MsG0880043103.01.T01 | MTR_3g048690 | 29.329 | 283 | 163 | 6 | 122 | 400 | 56 | 305 | 2.33e-27 | 115 |
MsG0880043103.01.T01 | MTR_3g062970 | 24.570 | 407 | 246 | 10 | 4 | 399 | 9 | 365 | 3.21e-27 | 114 |
MsG0880043103.01.T01 | MTR_3g451650 | 25.570 | 395 | 240 | 10 | 15 | 400 | 16 | 365 | 3.77e-26 | 111 |
MsG0880043103.01.T01 | MTR_3g062010 | 27.559 | 254 | 148 | 5 | 151 | 400 | 144 | 365 | 8.68e-26 | 110 |
MsG0880043103.01.T01 | MTR_3g062090 | 25.815 | 368 | 215 | 8 | 42 | 399 | 43 | 362 | 1.31e-25 | 110 |
MsG0880043103.01.T01 | MTR_3g062090 | 25.815 | 368 | 215 | 8 | 42 | 399 | 43 | 362 | 1.51e-25 | 109 |
MsG0880043103.01.T01 | MTR_3g451150 | 22.983 | 409 | 260 | 8 | 3 | 401 | 4 | 367 | 9.47e-25 | 107 |
MsG0880043103.01.T01 | MTR_3g452250 | 22.983 | 409 | 260 | 8 | 3 | 401 | 4 | 367 | 9.47e-25 | 107 |
MsG0880043103.01.T01 | MTR_3g467640 | 28.807 | 243 | 136 | 6 | 164 | 401 | 2 | 212 | 1.06e-23 | 103 |
MsG0880043103.01.T01 | MTR_5g092350 | 27.931 | 290 | 169 | 6 | 116 | 399 | 108 | 363 | 1.39e-23 | 103 |
MsG0880043103.01.T01 | MTR_5g092440 | 28.571 | 273 | 144 | 7 | 139 | 399 | 130 | 363 | 2.10e-23 | 102 |
MsG0880043103.01.T01 | MTR_3g062340 | 25.735 | 408 | 248 | 9 | 4 | 400 | 9 | 372 | 2.66e-23 | 103 |
MsG0880043103.01.T01 | MTR_7g026250 | 26.394 | 269 | 154 | 7 | 137 | 400 | 112 | 341 | 3.50e-23 | 102 |
MsG0880043103.01.T01 | MTR_5g092410 | 27.622 | 286 | 167 | 6 | 120 | 399 | 112 | 363 | 3.60e-23 | 101 |
MsG0880043103.01.T01 | MTR_4g091380 | 24.872 | 390 | 227 | 14 | 15 | 383 | 14 | 358 | 1.19e-22 | 100 |
MsG0880043103.01.T01 | MTR_3g062990 | 24.149 | 323 | 195 | 5 | 3 | 319 | 62 | 340 | 2.47e-22 | 100 |
MsG0880043103.01.T01 | MTR_3g062140 | 28.244 | 262 | 143 | 7 | 151 | 400 | 123 | 351 | 6.25e-22 | 99.0 |
MsG0880043103.01.T01 | MTR_5g062770 | 22.659 | 331 | 208 | 7 | 81 | 401 | 61 | 353 | 1.59e-21 | 95.9 |
MsG0880043103.01.T01 | MTR_3g466520 | 28.571 | 322 | 180 | 10 | 15 | 331 | 16 | 292 | 2.25e-21 | 97.1 |
MsG0880043103.01.T01 | MTR_5g092210 | 24.740 | 384 | 219 | 14 | 30 | 399 | 51 | 378 | 5.18e-21 | 95.5 |
MsG0880043103.01.T01 | MTR_3g466710 | 25.068 | 367 | 228 | 11 | 42 | 402 | 40 | 365 | 6.03e-21 | 95.9 |
MsG0880043103.01.T01 | MTR_6g464050 | 36.508 | 189 | 84 | 6 | 216 | 399 | 832 | 989 | 1.34e-20 | 95.1 |
MsG0880043103.01.T01 | MTR_7g018670 | 30.677 | 251 | 128 | 10 | 161 | 400 | 131 | 346 | 2.66e-20 | 93.6 |
MsG0880043103.01.T01 | MTR_4g091450 | 25.267 | 281 | 169 | 7 | 110 | 383 | 3 | 249 | 1.87e-19 | 91.3 |
MsG0880043103.01.T01 | MTR_2g071960 | 32.184 | 174 | 116 | 2 | 1 | 174 | 5 | 176 | 5.18e-19 | 90.1 |
MsG0880043103.01.T01 | MTR_3g031750 | 24.623 | 398 | 244 | 9 | 7 | 400 | 8 | 353 | 2.53e-18 | 88.2 |
MsG0880043103.01.T01 | MTR_8g087570 | 33.939 | 165 | 74 | 5 | 168 | 329 | 78 | 210 | 7.30e-18 | 82.0 |
MsG0880043103.01.T01 | MTR_8g087570 | 33.939 | 165 | 74 | 5 | 168 | 329 | 78 | 210 | 7.30e-18 | 82.0 |
MsG0880043103.01.T01 | MTR_7g018640 | 29.600 | 250 | 133 | 8 | 161 | 400 | 1145 | 1361 | 8.66e-18 | 86.3 |
MsG0880043103.01.T01 | MTR_7g018640 | 28.511 | 235 | 123 | 7 | 161 | 384 | 104 | 304 | 8.55e-16 | 80.1 |
MsG0880043103.01.T01 | MTR_3g062020 | 25.620 | 242 | 123 | 7 | 164 | 400 | 107 | 296 | 8.71e-18 | 85.9 |
MsG0880043103.01.T01 | MTR_8g087570 | 33.939 | 165 | 74 | 5 | 168 | 329 | 116 | 248 | 1.20e-17 | 82.4 |
MsG0880043103.01.T01 | MTR_7g018850 | 30.196 | 255 | 125 | 11 | 161 | 400 | 215 | 431 | 1.62e-17 | 85.5 |
MsG0880043103.01.T01 | MTR_7g018780 | 28.346 | 254 | 135 | 9 | 159 | 400 | 193 | 411 | 2.87e-17 | 84.3 |
MsG0880043103.01.T01 | MTR_7g018780 | 28.346 | 254 | 135 | 9 | 159 | 400 | 251 | 469 | 3.26e-17 | 84.3 |
MsG0880043103.01.T01 | MTR_0067s0070 | 23.315 | 356 | 226 | 10 | 50 | 399 | 51 | 365 | 7.94e-17 | 83.2 |
MsG0880043103.01.T01 | MTR_7g018810 | 28.409 | 264 | 130 | 10 | 161 | 400 | 227 | 455 | 1.79e-16 | 82.0 |
MsG0880043103.01.T01 | MTR_7g018840 | 37.168 | 113 | 70 | 1 | 161 | 273 | 95 | 206 | 9.67e-16 | 80.1 |
MsG0880043103.01.T01 | MTR_6g074810 | 25.362 | 276 | 145 | 12 | 137 | 397 | 188 | 417 | 4.44e-14 | 74.7 |
MsG0880043103.01.T01 | MTR_7g088650 | 33.784 | 148 | 64 | 6 | 255 | 399 | 7 | 123 | 6.20e-14 | 74.3 |
MsG0880043103.01.T01 | MTR_6g074620 | 25.794 | 252 | 149 | 9 | 152 | 397 | 198 | 417 | 5.27e-13 | 71.2 |
MsG0880043103.01.T01 | MTR_8g090310 | 27.419 | 248 | 138 | 9 | 161 | 400 | 179 | 392 | 1.60e-12 | 69.3 |
MsG0880043103.01.T01 | MTR_6g071430 | 25.397 | 252 | 150 | 8 | 152 | 397 | 187 | 406 | 5.01e-12 | 68.2 |
MsG0880043103.01.T01 | MTR_1g021100 | 24.454 | 229 | 135 | 8 | 175 | 400 | 205 | 398 | 1.18e-11 | 67.0 |
MsG0880043103.01.T01 | MTR_4g051698 | 26.761 | 284 | 164 | 12 | 127 | 400 | 170 | 419 | 1.80e-11 | 66.6 |
MsG0880043103.01.T01 | MTR_5g071780 | 22.362 | 398 | 257 | 17 | 32 | 402 | 23 | 395 | 1.84e-11 | 66.6 |
MsG0880043103.01.T01 | MTR_6g074875 | 26.812 | 276 | 166 | 8 | 127 | 396 | 171 | 416 | 4.47e-11 | 65.5 |
MsG0880043103.01.T01 | MTR_3g058880 | 24.521 | 261 | 150 | 11 | 150 | 400 | 194 | 417 | 5.28e-11 | 65.1 |
MsG0880043103.01.T01 | MTR_8g020360 | 25.781 | 256 | 154 | 10 | 150 | 399 | 221 | 446 | 5.92e-11 | 65.1 |
MsG0880043103.01.T01 | MTR_5g047480 | 25.769 | 260 | 147 | 10 | 152 | 400 | 187 | 411 | 6.13e-11 | 64.7 |
MsG0880043103.01.T01 | MTR_3g058880 | 24.521 | 261 | 150 | 11 | 150 | 400 | 194 | 417 | 6.35e-11 | 64.7 |
MsG0880043103.01.T01 | MTR_1g023600 | 23.188 | 345 | 222 | 12 | 63 | 388 | 53 | 373 | 8.84e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043103.01.T01 | AT1G61190 | 25.935 | 401 | 232 | 12 | 8 | 387 | 7 | 363 | 2.51e-25 | 108 |
MsG0880043103.01.T01 | AT1G61190 | 25.935 | 401 | 232 | 12 | 8 | 387 | 7 | 363 | 3.31e-25 | 108 |
MsG0880043103.01.T01 | AT1G61190 | 25.935 | 401 | 232 | 12 | 8 | 387 | 7 | 363 | 3.31e-25 | 108 |
MsG0880043103.01.T01 | AT1G61190 | 25.935 | 401 | 232 | 12 | 8 | 387 | 7 | 363 | 6.12e-25 | 107 |
MsG0880043103.01.T01 | AT1G61310 | 25.849 | 383 | 220 | 12 | 24 | 387 | 27 | 364 | 9.77e-25 | 107 |
MsG0880043103.01.T01 | AT1G61180 | 26.549 | 339 | 185 | 12 | 68 | 387 | 69 | 362 | 2.63e-22 | 99.8 |
MsG0880043103.01.T01 | AT1G61180 | 26.549 | 339 | 185 | 12 | 68 | 387 | 69 | 362 | 3.01e-22 | 99.8 |
MsG0880043103.01.T01 | AT5G63020 | 24.416 | 385 | 227 | 12 | 21 | 386 | 24 | 363 | 7.20e-22 | 98.6 |
MsG0880043103.01.T01 | AT1G61300 | 29.237 | 236 | 125 | 7 | 161 | 387 | 49 | 251 | 3.42e-21 | 96.3 |
MsG0880043103.01.T01 | AT1G61300 | 29.237 | 236 | 125 | 7 | 161 | 387 | 49 | 251 | 3.47e-21 | 96.3 |
MsG0880043103.01.T01 | AT5G47250 | 26.555 | 418 | 246 | 15 | 1 | 399 | 1 | 376 | 6.82e-21 | 95.5 |
MsG0880043103.01.T01 | AT1G12280 | 24.675 | 385 | 226 | 13 | 22 | 386 | 25 | 365 | 5.03e-20 | 92.8 |
MsG0880043103.01.T01 | AT4G27190 | 27.119 | 413 | 242 | 15 | 1 | 400 | 1 | 367 | 8.57e-20 | 92.4 |
MsG0880043103.01.T01 | AT1G51480 | 25.526 | 380 | 220 | 13 | 25 | 386 | 27 | 361 | 8.73e-20 | 92.0 |
MsG0880043103.01.T01 | AT4G27220 | 31.489 | 235 | 123 | 7 | 173 | 400 | 134 | 337 | 1.34e-19 | 91.7 |
MsG0880043103.01.T01 | AT4G27220 | 31.489 | 235 | 123 | 7 | 173 | 400 | 142 | 345 | 1.40e-19 | 91.7 |
MsG0880043103.01.T01 | AT5G05400 | 25.600 | 375 | 225 | 13 | 31 | 391 | 34 | 368 | 1.20e-18 | 88.6 |
MsG0880043103.01.T01 | AT1G12280 | 24.107 | 336 | 200 | 11 | 66 | 386 | 32 | 327 | 2.15e-18 | 87.8 |
MsG0880043103.01.T01 | AT4G10780 | 24.866 | 374 | 230 | 11 | 25 | 386 | 28 | 362 | 1.09e-17 | 85.9 |
MsG0880043103.01.T01 | AT4G10780 | 24.866 | 374 | 230 | 11 | 25 | 386 | 28 | 362 | 1.39e-17 | 85.5 |
MsG0880043103.01.T01 | AT1G12210 | 22.667 | 375 | 240 | 11 | 25 | 386 | 28 | 365 | 2.44e-17 | 84.7 |
MsG0880043103.01.T01 | AT5G43730 | 25.401 | 374 | 227 | 11 | 25 | 386 | 27 | 360 | 7.73e-17 | 83.2 |
MsG0880043103.01.T01 | AT5G43730 | 25.401 | 374 | 227 | 11 | 25 | 386 | 27 | 360 | 7.73e-17 | 83.2 |
MsG0880043103.01.T01 | AT5G43730 | 25.401 | 374 | 227 | 11 | 25 | 386 | 27 | 360 | 7.73e-17 | 83.2 |
MsG0880043103.01.T01 | AT5G43730 | 25.401 | 374 | 227 | 11 | 25 | 386 | 27 | 360 | 7.73e-17 | 83.2 |
MsG0880043103.01.T01 | AT5G43730 | 25.401 | 374 | 227 | 11 | 25 | 386 | 27 | 360 | 7.73e-17 | 83.2 |
MsG0880043103.01.T01 | AT1G12210 | 22.590 | 332 | 210 | 9 | 66 | 386 | 28 | 323 | 8.83e-17 | 83.2 |
MsG0880043103.01.T01 | AT1G12210 | 22.590 | 332 | 210 | 9 | 66 | 386 | 28 | 323 | 8.83e-17 | 83.2 |
MsG0880043103.01.T01 | AT5G43740 | 25.134 | 374 | 228 | 12 | 25 | 386 | 26 | 359 | 9.15e-16 | 79.7 |
MsG0880043103.01.T01 | AT5G43740 | 25.134 | 374 | 228 | 12 | 25 | 386 | 26 | 359 | 9.15e-16 | 79.7 |
MsG0880043103.01.T01 | AT5G05400 | 29.565 | 230 | 117 | 10 | 172 | 391 | 5 | 199 | 2.51e-15 | 78.6 |
MsG0880043103.01.T01 | AT5G05400 | 29.565 | 230 | 117 | 10 | 172 | 391 | 5 | 199 | 2.51e-15 | 78.6 |
MsG0880043103.01.T01 | AT1G52660 | 26.577 | 222 | 120 | 7 | 175 | 386 | 162 | 350 | 1.95e-14 | 74.7 |
MsG0880043103.01.T01 | AT1G52660 | 26.577 | 222 | 120 | 7 | 175 | 386 | 162 | 350 | 2.02e-14 | 74.7 |
Find 90 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACAGCTCTTTCTACAAATT+TGG | 0.111174 | 8:-19098256 | None:intergenic |
GGAATCTCTAATGTTGTTTA+AGG | 0.162515 | 8:+19099265 | MsG0880043103.01.T01:CDS |
AAAAGTATTGTCTGATAAAA+TGG | 0.224866 | 8:+19099202 | MsG0880043103.01.T01:CDS |
CCTTTCAATTGTACGTGTTC+TGG | 0.229374 | 8:-19098709 | None:intergenic |
AAATCTCCTGGTGATTATAA+TGG | 0.280628 | 8:+19099149 | MsG0880043103.01.T01:CDS |
GTACGTGTTAGGATTGAATT+TGG | 0.285651 | 8:+19098917 | MsG0880043103.01.T01:CDS |
GATTCCATTTGACGATGATA+TGG | 0.326373 | 8:+19099058 | MsG0880043103.01.T01:CDS |
TTCTTCACCATTGTGAAGTT+AGG | 0.335604 | 8:-19099122 | None:intergenic |
ACACGTACGCAATTTCTTCC+TGG | 0.341890 | 8:-19098902 | None:intergenic |
GAAGAAATTGCGTACGTGTT+AGG | 0.345106 | 8:+19098906 | MsG0880043103.01.T01:CDS |
TTGTCGTCATGGATGACCTT+TGG | 0.371927 | 8:+19099009 | MsG0880043103.01.T01:CDS |
AGAATAGACTTGAATAAGAT+AGG | 0.375936 | 8:+19099035 | MsG0880043103.01.T01:CDS |
TGTCGTCATGGATGACCTTT+GGG | 0.383626 | 8:+19099010 | MsG0880043103.01.T01:CDS |
AGGGAGAAAAGCAAAGAAAA+TGG | 0.384350 | 8:+19098572 | MsG0880043103.01.T01:CDS |
CCAAGCTGCAACATTACTTT+CGG | 0.386961 | 8:-19098433 | None:intergenic |
AGTGCATGGGCCAGGTGGTG+TGG | 0.387454 | 8:+19098773 | MsG0880043103.01.T01:CDS |
AGATGTTGGCCTTTGCTGAT+AGG | 0.390790 | 8:-19098643 | None:intergenic |
GATTCTGCAGTGAGAATGAT+TGG | 0.404617 | 8:+19098750 | MsG0880043103.01.T01:CDS |
GTGCATGGGCCAGGTGGTGT+GGG | 0.413540 | 8:+19098774 | MsG0880043103.01.T01:CDS |
AATCTCCTGGTGATTATAAT+GGG | 0.419848 | 8:+19099150 | MsG0880043103.01.T01:CDS |
ATAGACGAGTCGAAGTTTGA+TGG | 0.422601 | 8:+19098615 | MsG0880043103.01.T01:CDS |
TTGTGTTGGACCTGACTATT+CGG | 0.423893 | 8:+19098283 | MsG0880043103.01.T01:CDS |
TGAAATGTCCACATTTAAAC+AGG | 0.428911 | 8:+19099307 | MsG0880043103.01.T01:CDS |
TGTGAGGGAATTAGATGATA+AGG | 0.466149 | 8:+19099244 | MsG0880043103.01.T01:CDS |
ATTGTTAAGAAGTATTGTGC+AGG | 0.468110 | 8:+19099332 | MsG0880043103.01.T01:CDS |
CCCATGGCAATTGTTACTGT+TGG | 0.471895 | 8:+19099359 | MsG0880043103.01.T01:CDS |
TCTAATGTTGTTTAAGGAGG+AGG | 0.483129 | 8:+19099271 | MsG0880043103.01.T01:CDS |
TGCAGCTTGGCTTCAGAAAG+TGG | 0.496943 | 8:+19098446 | MsG0880043103.01.T01:CDS |
GAAGGAGGTTAAAGAAAGAG+AGG | 0.499901 | 8:+19098976 | MsG0880043103.01.T01:CDS |
GATGAAGCTGAGGATAATCT+AGG | 0.500609 | 8:+19098405 | MsG0880043103.01.T01:CDS |
GTGTTAGGATTGAATTTGGA+AGG | 0.514574 | 8:+19098921 | MsG0880043103.01.T01:CDS |
AGGTCTTGAAAGAAAGAGGC+TGG | 0.516359 | 8:+19098371 | MsG0880043103.01.T01:CDS |
AACCCACATGCCGAATAGTC+AGG | 0.517405 | 8:-19098293 | None:intergenic |
GGATAAAACTAGAACTGAAA+CGG | 0.518844 | 8:+19098467 | MsG0880043103.01.T01:CDS |
GGGTTACATCTTCTATTACA+AGG | 0.523250 | 8:+19098311 | MsG0880043103.01.T01:CDS |
TCATCCATATCATCGTCAAA+TGG | 0.524996 | 8:-19099062 | None:intergenic |
TGGCAATTGTTACTGTTGGA+AGG | 0.526811 | 8:+19099363 | MsG0880043103.01.T01:CDS |
TGTTAGGATTGAATTTGGAA+GGG | 0.529413 | 8:+19098922 | MsG0880043103.01.T01:CDS |
GGAGAACACCCTTGTCGTCA+TGG | 0.532512 | 8:+19098998 | MsG0880043103.01.T01:CDS |
AACTTCACAATGGTGAAGAA+AGG | 0.533502 | 8:+19099125 | MsG0880043103.01.T01:CDS |
GAAATAAGAGTGAGTCAGTG+TGG | 0.534651 | 8:+19099393 | MsG0880043103.01.T01:CDS |
GGCAATTGTTACTGTTGGAA+GGG | 0.537567 | 8:+19099364 | MsG0880043103.01.T01:CDS |
TGAGAGCAGATCGTCTAAGA+AGG | 0.538370 | 8:+19098958 | MsG0880043103.01.T01:CDS |
GTGAGAATGATTGGAGTGCA+TGG | 0.539504 | 8:+19098759 | MsG0880043103.01.T01:CDS |
GAATAGACTTGAATAAGATA+GGG | 0.541771 | 8:+19099036 | MsG0880043103.01.T01:CDS |
AACAATCTCCTGTTTAAATG+TGG | 0.542645 | 8:-19099315 | None:intergenic |
TCCAACAGTAACAATTGCCA+TGG | 0.543949 | 8:-19099360 | None:intergenic |
AGCTAGGTCTTGAAAGAAAG+AGG | 0.545498 | 8:+19098367 | MsG0880043103.01.T01:CDS |
ATGATTGGAGTGCATGGGCC+AGG | 0.545836 | 8:+19098765 | MsG0880043103.01.T01:CDS |
GTGAAGAAAGGAAAATCTCC+TGG | 0.552991 | 8:+19099137 | MsG0880043103.01.T01:CDS |
ATCTCTAATGTTGTTTAAGG+AGG | 0.553760 | 8:+19099268 | MsG0880043103.01.T01:CDS |
ATGGAGTTTCCTATCAGCAA+AGG | 0.556341 | 8:+19098634 | MsG0880043103.01.T01:CDS |
AAGGAGGTTAAAGAAAGAGA+GGG | 0.557666 | 8:+19098977 | MsG0880043103.01.T01:CDS |
ATGTTGTTTAAGGAGGAGGC+TGG | 0.563429 | 8:+19099275 | MsG0880043103.01.T01:CDS |
CCGAAAGTAATGTTGCAGCT+TGG | 0.563966 | 8:+19098433 | MsG0880043103.01.T01:CDS |
CCAGAACACGTACAATTGAA+AGG | 0.565264 | 8:+19098709 | MsG0880043103.01.T01:CDS |
GTTAGGATTGAATTTGGAAG+GGG | 0.570524 | 8:+19098923 | MsG0880043103.01.T01:CDS |
GTGGTTTATTTCATTACTTG+AGG | 0.570611 | 8:+19098535 | MsG0880043103.01.T01:CDS |
TCATATCATCAATTGTCAGA+CGG | 0.572747 | 8:-19099094 | None:intergenic |
GTGCTCTTACCCACACCACC+TGG | 0.573413 | 8:-19098783 | None:intergenic |
CAAGTAATGAAATAAACCAC+TGG | 0.574100 | 8:-19098532 | None:intergenic |
GAATTTGGAAGGGGAAGGTG+AGG | 0.574111 | 8:+19098932 | MsG0880043103.01.T01:CDS |
GATGAGTTTCAAGATGATGA+AGG | 0.576050 | 8:+19098489 | MsG0880043103.01.T01:CDS |
AAATAAGAGTGAGTCAGTGT+GGG | 0.577228 | 8:+19099394 | MsG0880043103.01.T01:CDS |
GGACCTGACTATTCGGCATG+TGG | 0.578448 | 8:+19098290 | MsG0880043103.01.T01:CDS |
AACAGTCTTGTTGAGAAGCT+AGG | 0.584140 | 8:+19098351 | MsG0880043103.01.T01:CDS |
AAAGCAGCATGCATAGATGT+TGG | 0.586104 | 8:-19098657 | None:intergenic |
TGAGGAACAGACATAGACTA+GGG | 0.587201 | 8:+19098553 | MsG0880043103.01.T01:CDS |
AAAAGCAAAGAAAATGGCAG+TGG | 0.590092 | 8:+19098578 | MsG0880043103.01.T01:CDS |
CATGCTGCTTTGTTTAACGA+TGG | 0.592867 | 8:+19098669 | MsG0880043103.01.T01:CDS |
GGATTGAATTTGGAAGGGGA+AGG | 0.596526 | 8:+19098927 | MsG0880043103.01.T01:CDS |
TTGTTAAGAAGTATTGTGCA+GGG | 0.597410 | 8:+19099333 | MsG0880043103.01.T01:CDS |
TTGAGGAACAGACATAGACT+AGG | 0.597903 | 8:+19098552 | MsG0880043103.01.T01:CDS |
TGGAAAACCTTGTCTTCGTG+TGG | 0.598454 | 8:-19098512 | None:intergenic |
TCAAGTCTATTCTGTCCCAA+AGG | 0.601847 | 8:-19099025 | None:intergenic |
AAAGGTCATCCATGACGACA+AGG | 0.617638 | 8:-19099007 | None:intergenic |
TTGCACCCATTATAATCACC+AGG | 0.617766 | 8:-19099155 | None:intergenic |
AAGAGCTGTCGATGTTGTGT+TGG | 0.621740 | 8:+19098269 | MsG0880043103.01.T01:CDS |
GACCTGACTATTCGGCATGT+GGG | 0.627481 | 8:+19098291 | MsG0880043103.01.T01:CDS |
ATGAAGGCCACACGAAGACA+AGG | 0.631367 | 8:+19098505 | MsG0880043103.01.T01:CDS |
TGTTAAGAAAGCTCAAGCAA+AGG | 0.633530 | 8:+19098821 | MsG0880043103.01.T01:CDS |
TGAGAATGATTGGAGTGCAT+GGG | 0.638151 | 8:+19098760 | MsG0880043103.01.T01:CDS |
ACATCGAGTAGATGAAGCTG+AGG | 0.638670 | 8:+19098395 | MsG0880043103.01.T01:CDS |
GAAAGATCCTAACTTCACAA+TGG | 0.658344 | 8:+19099115 | MsG0880043103.01.T01:CDS |
GAGCAGATCGTCTAAGAAGG+AGG | 0.660730 | 8:+19098961 | MsG0880043103.01.T01:CDS |
AGCAAAGGAGTTGTTCAATG+TGG | 0.668166 | 8:+19098836 | MsG0880043103.01.T01:CDS |
GTATTGTGCAGGGTTACCCA+TGG | 0.669955 | 8:+19099343 | MsG0880043103.01.T01:CDS |
CCAACAGTAACAATTGCCAT+GGG | 0.674166 | 8:-19099359 | None:intergenic |
AAGGTCATCCATGACGACAA+GGG | 0.685133 | 8:-19099006 | None:intergenic |
ATTGGAGTGCATGGGCCAGG+TGG | 0.702583 | 8:+19098768 | MsG0880043103.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAGTATTGTCTGATAAAA+TGG | + | Chr8:19099202-19099221 | MsG0880043103.01.T01:CDS | 20.0% |
! | AGAATAGACTTGAATAAGAT+AGG | + | Chr8:19099035-19099054 | MsG0880043103.01.T01:CDS | 25.0% |
! | CACTTGAAAAACTTAAAAAG+AGG | + | Chr8:19099423-19099442 | MsG0880043103.01.T01:CDS | 25.0% |
! | GAATAGACTTGAATAAGATA+GGG | + | Chr8:19099036-19099055 | MsG0880043103.01.T01:CDS | 25.0% |
!!! | CTTTTTAAGTTTTTCAAGTG+TGG | - | Chr8:19099423-19099442 | None:intergenic | 25.0% |
AAATCTCCTGGTGATTATAA+TGG | + | Chr8:19099149-19099168 | MsG0880043103.01.T01:CDS | 30.0% | |
AACAATCTCCTGTTTAAATG+TGG | - | Chr8:19099318-19099337 | None:intergenic | 30.0% | |
AATCTCCTGGTGATTATAAT+GGG | + | Chr8:19099150-19099169 | MsG0880043103.01.T01:CDS | 30.0% | |
CAAGTAATGAAATAAACCAC+TGG | - | Chr8:19098535-19098554 | None:intergenic | 30.0% | |
GGATAAAACTAGAACTGAAA+CGG | + | Chr8:19098467-19098486 | MsG0880043103.01.T01:CDS | 30.0% | |
GTGGTTTATTTCATTACTTG+AGG | + | Chr8:19098535-19098554 | MsG0880043103.01.T01:CDS | 30.0% | |
TCATATCATCAATTGTCAGA+CGG | - | Chr8:19099097-19099116 | None:intergenic | 30.0% | |
TGAAATGTCCACATTTAAAC+AGG | + | Chr8:19099307-19099326 | MsG0880043103.01.T01:CDS | 30.0% | |
TGTTAGGATTGAATTTGGAA+GGG | + | Chr8:19098922-19098941 | MsG0880043103.01.T01:CDS | 30.0% | |
! | ATCTCTAATGTTGTTTAAGG+AGG | + | Chr8:19099268-19099287 | MsG0880043103.01.T01:CDS | 30.0% |
! | GGAATCTCTAATGTTGTTTA+AGG | + | Chr8:19099265-19099284 | MsG0880043103.01.T01:CDS | 30.0% |
!! | ATTGTTAAGAAGTATTGTGC+AGG | + | Chr8:19099332-19099351 | MsG0880043103.01.T01:CDS | 30.0% |
!! | TTGTTAAGAAGTATTGTGCA+GGG | + | Chr8:19099333-19099352 | MsG0880043103.01.T01:CDS | 30.0% |
AAAAGCAAAGAAAATGGCAG+TGG | + | Chr8:19098578-19098597 | MsG0880043103.01.T01:CDS | 35.0% | |
AAATAAGAGTGAGTCAGTGT+GGG | + | Chr8:19099394-19099413 | MsG0880043103.01.T01:CDS | 35.0% | |
AACTTCACAATGGTGAAGAA+AGG | + | Chr8:19099125-19099144 | MsG0880043103.01.T01:CDS | 35.0% | |
AAGGAGGTTAAAGAAAGAGA+GGG | + | Chr8:19098977-19098996 | MsG0880043103.01.T01:CDS | 35.0% | |
AGGGAGAAAAGCAAAGAAAA+TGG | + | Chr8:19098572-19098591 | MsG0880043103.01.T01:CDS | 35.0% | |
GAAAGATCCTAACTTCACAA+TGG | + | Chr8:19099115-19099134 | MsG0880043103.01.T01:CDS | 35.0% | |
GACAGCTCTTTCTACAAATT+TGG | - | Chr8:19098259-19098278 | None:intergenic | 35.0% | |
GATGAGTTTCAAGATGATGA+AGG | + | Chr8:19098489-19098508 | MsG0880043103.01.T01:CDS | 35.0% | |
GATTCCATTTGACGATGATA+TGG | + | Chr8:19099058-19099077 | MsG0880043103.01.T01:CDS | 35.0% | |
GGGTTACATCTTCTATTACA+AGG | + | Chr8:19098311-19098330 | MsG0880043103.01.T01:CDS | 35.0% | |
GTACGTGTTAGGATTGAATT+TGG | + | Chr8:19098917-19098936 | MsG0880043103.01.T01:CDS | 35.0% | |
GTGTTAGGATTGAATTTGGA+AGG | + | Chr8:19098921-19098940 | MsG0880043103.01.T01:CDS | 35.0% | |
GTTAGGATTGAATTTGGAAG+GGG | + | Chr8:19098923-19098942 | MsG0880043103.01.T01:CDS | 35.0% | |
TCATCCATATCATCGTCAAA+TGG | - | Chr8:19099065-19099084 | None:intergenic | 35.0% | |
TGTGAGGGAATTAGATGATA+AGG | + | Chr8:19099244-19099263 | MsG0880043103.01.T01:CDS | 35.0% | |
TGTTAAGAAAGCTCAAGCAA+AGG | + | Chr8:19098821-19098840 | MsG0880043103.01.T01:CDS | 35.0% | |
TTCTTCACCATTGTGAAGTT+AGG | - | Chr8:19099125-19099144 | None:intergenic | 35.0% | |
! | TCTAATGTTGTTTAAGGAGG+AGG | + | Chr8:19099271-19099290 | MsG0880043103.01.T01:CDS | 35.0% |
AAAGCAGCATGCATAGATGT+TGG | - | Chr8:19098660-19098679 | None:intergenic | 40.0% | |
AGCAAAGGAGTTGTTCAATG+TGG | + | Chr8:19098836-19098855 | MsG0880043103.01.T01:CDS | 40.0% | |
AGCTAGGTCTTGAAAGAAAG+AGG | + | Chr8:19098367-19098386 | MsG0880043103.01.T01:CDS | 40.0% | |
ATAGACGAGTCGAAGTTTGA+TGG | + | Chr8:19098615-19098634 | MsG0880043103.01.T01:CDS | 40.0% | |
ATGGAGTTTCCTATCAGCAA+AGG | + | Chr8:19098634-19098653 | MsG0880043103.01.T01:CDS | 40.0% | |
CCAACAGTAACAATTGCCAT+GGG | - | Chr8:19099362-19099381 | None:intergenic | 40.0% | |
CCAAGCTGCAACATTACTTT+CGG | - | Chr8:19098436-19098455 | None:intergenic | 40.0% | |
CCAGAACACGTACAATTGAA+AGG | + | Chr8:19098709-19098728 | MsG0880043103.01.T01:CDS | 40.0% | |
CCTTTCAATTGTACGTGTTC+TGG | - | Chr8:19098712-19098731 | None:intergenic | 40.0% | |
GAAATAAGAGTGAGTCAGTG+TGG | + | Chr8:19099393-19099412 | MsG0880043103.01.T01:CDS | 40.0% | |
GAAGAAATTGCGTACGTGTT+AGG | + | Chr8:19098906-19098925 | MsG0880043103.01.T01:CDS | 40.0% | |
GAAGGAGGTTAAAGAAAGAG+AGG | + | Chr8:19098976-19098995 | MsG0880043103.01.T01:CDS | 40.0% | |
GATGAAGCTGAGGATAATCT+AGG | + | Chr8:19098405-19098424 | MsG0880043103.01.T01:CDS | 40.0% | |
GATTCTGCAGTGAGAATGAT+TGG | + | Chr8:19098750-19098769 | MsG0880043103.01.T01:CDS | 40.0% | |
GGCAATTGTTACTGTTGGAA+GGG | + | Chr8:19099364-19099383 | MsG0880043103.01.T01:CDS | 40.0% | |
GTGAAGAAAGGAAAATCTCC+TGG | + | Chr8:19099137-19099156 | MsG0880043103.01.T01:CDS | 40.0% | |
TCAAGTCTATTCTGTCCCAA+AGG | - | Chr8:19099028-19099047 | None:intergenic | 40.0% | |
TCCAACAGTAACAATTGCCA+TGG | - | Chr8:19099363-19099382 | None:intergenic | 40.0% | |
TGAGAATGATTGGAGTGCAT+GGG | + | Chr8:19098760-19098779 | MsG0880043103.01.T01:CDS | 40.0% | |
TGAGGAACAGACATAGACTA+GGG | + | Chr8:19098553-19098572 | MsG0880043103.01.T01:CDS | 40.0% | |
TGGCAATTGTTACTGTTGGA+AGG | + | Chr8:19099363-19099382 | MsG0880043103.01.T01:CDS | 40.0% | |
TTGAGGAACAGACATAGACT+AGG | + | Chr8:19098552-19098571 | MsG0880043103.01.T01:CDS | 40.0% | |
TTGCACCCATTATAATCACC+AGG | - | Chr8:19099158-19099177 | None:intergenic | 40.0% | |
TTGTGTTGGACCTGACTATT+CGG | + | Chr8:19098283-19098302 | MsG0880043103.01.T01:CDS | 40.0% | |
! | CAAGTCAGTTTTCTGTGTGA+GGG | + | Chr8:19099229-19099248 | MsG0880043103.01.T01:CDS | 40.0% |
! | TCAAGTCAGTTTTCTGTGTG+AGG | + | Chr8:19099228-19099247 | MsG0880043103.01.T01:CDS | 40.0% |
! | TTTCTTCCTGGATTTTTCGC+AGG | - | Chr8:19098893-19098912 | None:intergenic | 40.0% |
!! | AACAGTCTTGTTGAGAAGCT+AGG | + | Chr8:19098351-19098370 | MsG0880043103.01.T01:CDS | 40.0% |
!! | CATGCTGCTTTGTTTAACGA+TGG | + | Chr8:19098669-19098688 | MsG0880043103.01.T01:CDS | 40.0% |
AAAGGTCATCCATGACGACA+AGG | - | Chr8:19099010-19099029 | None:intergenic | 45.0% | |
AAGAGCTGTCGATGTTGTGT+TGG | + | Chr8:19098269-19098288 | MsG0880043103.01.T01:CDS | 45.0% | |
AAGGTCATCCATGACGACAA+GGG | - | Chr8:19099009-19099028 | None:intergenic | 45.0% | |
ACACGTACGCAATTTCTTCC+TGG | - | Chr8:19098905-19098924 | None:intergenic | 45.0% | |
ACATCGAGTAGATGAAGCTG+AGG | + | Chr8:19098395-19098414 | MsG0880043103.01.T01:CDS | 45.0% | |
AGGTCTTGAAAGAAAGAGGC+TGG | + | Chr8:19098371-19098390 | MsG0880043103.01.T01:CDS | 45.0% | |
CCCATGGCAATTGTTACTGT+TGG | + | Chr8:19099359-19099378 | MsG0880043103.01.T01:CDS | 45.0% | |
CCGAAAGTAATGTTGCAGCT+TGG | + | Chr8:19098433-19098452 | MsG0880043103.01.T01:CDS | 45.0% | |
GGATTGAATTTGGAAGGGGA+AGG | + | Chr8:19098927-19098946 | MsG0880043103.01.T01:CDS | 45.0% | |
GTGAGAATGATTGGAGTGCA+TGG | + | Chr8:19098759-19098778 | MsG0880043103.01.T01:CDS | 45.0% | |
TGAGAGCAGATCGTCTAAGA+AGG | + | Chr8:19098958-19098977 | MsG0880043103.01.T01:CDS | 45.0% | |
TGGAAAACCTTGTCTTCGTG+TGG | - | Chr8:19098515-19098534 | None:intergenic | 45.0% | |
TGTCGTCATGGATGACCTTT+GGG | + | Chr8:19099010-19099029 | MsG0880043103.01.T01:CDS | 45.0% | |
TTGTCGTCATGGATGACCTT+TGG | + | Chr8:19099009-19099028 | MsG0880043103.01.T01:CDS | 45.0% | |
! | ACGAAGACAAGGTTTTCCAG+TGG | + | Chr8:19098516-19098535 | MsG0880043103.01.T01:CDS | 45.0% |
! | ATGTTGTTTAAGGAGGAGGC+TGG | + | Chr8:19099275-19099294 | MsG0880043103.01.T01:CDS | 45.0% |
! | TCCTGGATTTTTCGCAGGTT+GGG | - | Chr8:19098888-19098907 | None:intergenic | 45.0% |
! | TTCCTGGATTTTTCGCAGGT+TGG | - | Chr8:19098889-19098908 | None:intergenic | 45.0% |
!! | AGATGTTGGCCTTTGCTGAT+AGG | - | Chr8:19098646-19098665 | None:intergenic | 45.0% |
AACCCACATGCCGAATAGTC+AGG | - | Chr8:19098296-19098315 | None:intergenic | 50.0% | |
ATGAAGGCCACACGAAGACA+AGG | + | Chr8:19098505-19098524 | MsG0880043103.01.T01:CDS | 50.0% | |
GAATTTGGAAGGGGAAGGTG+AGG | + | Chr8:19098932-19098951 | MsG0880043103.01.T01:CDS | 50.0% | |
GACCTGACTATTCGGCATGT+GGG | + | Chr8:19098291-19098310 | MsG0880043103.01.T01:CDS | 50.0% | |
GAGCAGATCGTCTAAGAAGG+AGG | + | Chr8:19098961-19098980 | MsG0880043103.01.T01:CDS | 50.0% | |
GTATTGTGCAGGGTTACCCA+TGG | + | Chr8:19099343-19099362 | MsG0880043103.01.T01:CDS | 50.0% | |
TCCCAACCTGCGAAAAATCC+AGG | + | Chr8:19098884-19098903 | MsG0880043103.01.T01:CDS | 50.0% | |
TGCAGCTTGGCTTCAGAAAG+TGG | + | Chr8:19098446-19098465 | MsG0880043103.01.T01:CDS | 50.0% | |
ATGATTGGAGTGCATGGGCC+AGG | + | Chr8:19098765-19098784 | MsG0880043103.01.T01:CDS | 55.0% | |
GGACCTGACTATTCGGCATG+TGG | + | Chr8:19098290-19098309 | MsG0880043103.01.T01:CDS | 55.0% | |
GGAGAACACCCTTGTCGTCA+TGG | + | Chr8:19098998-19099017 | MsG0880043103.01.T01:CDS | 55.0% | |
ATTGGAGTGCATGGGCCAGG+TGG | + | Chr8:19098768-19098787 | MsG0880043103.01.T01:CDS | 60.0% | |
GTGCTCTTACCCACACCACC+TGG | - | Chr8:19098786-19098805 | None:intergenic | 60.0% | |
AGTGCATGGGCCAGGTGGTG+TGG | + | Chr8:19098773-19098792 | MsG0880043103.01.T01:CDS | 65.0% | |
GTGCATGGGCCAGGTGGTGT+GGG | + | Chr8:19098774-19098793 | MsG0880043103.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 19098243 | 19099451 | 19098243 | ID=MsG0880043103.01;Name=MsG0880043103.01 |
Chr8 | mRNA | 19098243 | 19099451 | 19098243 | ID=MsG0880043103.01.T01;Parent=MsG0880043103.01;Name=MsG0880043103.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|402 |
Chr8 | exon | 19098243 | 19099451 | 19098243 | ID=MsG0880043103.01.T01:exon:4975;Parent=MsG0880043103.01.T01 |
Chr8 | CDS | 19098243 | 19099451 | 19098243 | ID=MsG0880043103.01.T01:cds;Parent=MsG0880043103.01.T01 |
Gene Sequence |
Protein sequence |