AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040074.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040074.01.T02 MTR_7g084200 91.865 504 4 2 1 480 1 491 0.0 933
MsG0780040074.01.T02 MTR_6g033240 72.581 496 94 5 12 479 19 500 0.0 702
MsG0780040074.01.T02 MTR_2g101420 25.234 214 123 6 253 430 496 708 1.22e-12 70.9
MsG0780040074.01.T01 MTR_7g084200 91.865 504 4 2 1 480 1 491 0.0 933
MsG0780040074.01.T01 MTR_6g033240 72.581 496 94 5 12 479 19 500 0.0 702
MsG0780040074.01.T01 MTR_2g101420 25.234 214 123 6 253 430 496 708 1.22e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040074.01.T02 AT3G19340 70.101 495 103 4 11 476 5 483 0.0 697
MsG0780040074.01.T02 AT5G13940 55.675 467 162 5 39 477 170 619 3.60e-170 494
MsG0780040074.01.T02 AT5G13940 55.675 467 162 5 39 477 321 770 3.11e-168 494
MsG0780040074.01.T02 AT2G46915 25.833 240 133 8 229 430 445 677 1.24e-13 73.9
MsG0780040074.01.T02 AT2G46915 30.894 123 81 2 311 430 512 633 7.31e-11 65.1
MsG0780040074.01.T01 AT3G19340 70.101 495 103 4 11 476 5 483 0.0 697
MsG0780040074.01.T01 AT5G13940 55.675 467 162 5 39 477 170 619 3.60e-170 494
MsG0780040074.01.T01 AT5G13940 55.675 467 162 5 39 477 321 770 3.11e-168 494
MsG0780040074.01.T01 AT2G46915 25.833 240 133 8 229 430 445 677 1.24e-13 73.9
MsG0780040074.01.T01 AT2G46915 30.894 123 81 2 311 430 512 633 7.31e-11 65.1

Find 14 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTGCAACGGTGAGTTTC+AGG 0.144012 7:-72749525 None:intergenic
ACTTCTGAGTTGTCTTAATT+TGG 0.158404 7:-72749495 None:intergenic
ATGACATTGGCAAATCTTAT+TGG 0.227085 7:+72749901 MsG0780040074.01.T01:CDS
ATGAGTCTAGGTTTGAGAAT+TGG 0.396346 7:-72749877 None:intergenic
TTAATTTGGATTTATTCAAT+TGG 0.421022 7:-72749481 None:intergenic
TGCAACTTTGGTTTCTTCGC+AGG 0.479674 7:-72749599 None:intergenic
ACTTGCAACGGTGAGTTTCA+GGG 0.512979 7:-72749524 None:intergenic
GCCAATGTCATGATGAGTCT+AGG 0.527550 7:-72749889 None:intergenic
ACTTTGGTTTCTTCGCAGGT+TGG 0.528056 7:-72749595 None:intergenic
GGCACAAGAATCACAAGCAA+TGG 0.553967 7:+72749807 MsG0780040074.01.T01:CDS
CTTGCAACGGTGAGTTTCAG+GGG 0.566920 7:-72749523 None:intergenic
CGAATAACTTCATTCTTGTG+CGG 0.593743 7:-72749832 None:intergenic
ACCTAGACTCATCATGACAT+TGG 0.595965 7:+72749888 MsG0780040074.01.T01:CDS
ATCATCATCATCACTTGCAA+CGG 0.598943 7:-72749536 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATCTTAAATTCTTAT+AGG + Chr7:72754360-72754379 MsG0780040074.01.T01:intron 10.0%
!! CAAAAATTAAATCATATAAA+AGG - Chr7:72750138-72750157 None:intergenic 10.0%
!!! AAATTCTATATTTTTACTTA+GGG + Chr7:72754516-72754535 MsG0780040074.01.T01:intron 10.0%
!!! AATTTTATTTTATTTTGTTG+TGG + Chr7:72753827-72753846 MsG0780040074.01.T01:intron 10.0%
!!! TAAATTCTATATTTTTACTT+AGG + Chr7:72754515-72754534 MsG0780040074.01.T01:intron 10.0%
!!! TTATTTATTTTGATAACAAA+GGG - Chr7:72754225-72754244 None:intergenic 10.0%
!! AAATAATAAAACAAAGTTGA+AGG - Chr7:72754834-72754853 None:intergenic 15.0%
!! AATTAAATCATATAAAAGGT+AGG - Chr7:72750134-72750153 None:intergenic 15.0%
!! ACTTCAATATAAAATAATTG+AGG + Chr7:72751748-72751767 MsG0780040074.01.T01:intron 15.0%
!! AGATAACATACTAAAATAAT+AGG - Chr7:72752594-72752613 None:intergenic 15.0%
!! GAATTTATAAATAAAAAAGG+TGG - Chr7:72754502-72754521 None:intergenic 15.0%
!! TTATAGCTTATATATAACTT+GGG + Chr7:72750936-72750955 MsG0780040074.01.T01:intron 15.0%
!! TTTATAGCTTATATATAACT+TGG + Chr7:72750935-72750954 MsG0780040074.01.T01:intron 15.0%
!!! ATAAATAAGGTTTTAAATTG+CGG - Chr7:72750347-72750366 None:intergenic 15.0%
!!! CTTATTTATTTTGATAACAA+AGG - Chr7:72754226-72754245 None:intergenic 15.0%
!!! GAAAAATTTGAAATCTAAAA+AGG + Chr7:72753335-72753354 MsG0780040074.01.T01:intron 15.0%
!!! TATACTGTTTTTGTAATTTT+TGG + Chr7:72749999-72750018 MsG0780040074.01.T01:intron 15.0%
!!! TATTATTATTTGATTTGTGT+CGG + Chr7:72755726-72755745 MsG0780040074.01.T01:intron 15.0%
!!! TATTTTAGTATGTTATCTTT+CGG + Chr7:72752596-72752615 MsG0780040074.01.T01:intron 15.0%
!!! TTAATTTGGATTTATTCAAT+TGG - Chr7:72749484-72749503 None:intergenic 15.0%
!!! TTTTACATTGAACTTTTAAA+AGG - Chr7:72752827-72752846 None:intergenic 15.0%
!! AAATTGATGAAATTGATGAA+AGG - Chr7:72749657-72749676 None:intergenic 20.0%
!! AAGTTACAGTATTAATATGA+AGG + Chr7:72751191-72751210 MsG0780040074.01.T01:intron 20.0%
!! ACTTTCATTCTTTATTCTAA+TGG + Chr7:72754396-72754415 MsG0780040074.01.T01:CDS 20.0%
!! AGCAAAAAAAAAAAACGTAA+AGG - Chr7:72749738-72749757 None:intergenic 20.0%
!! ATGTTCTTATTCATAAACAA+AGG - Chr7:72755362-72755381 None:intergenic 20.0%
!! GTACAAACTGTTAATAAATA+AGG - Chr7:72750360-72750379 None:intergenic 20.0%
!! GTGATTAATTCACTAAATAT+TGG + Chr7:72752303-72752322 MsG0780040074.01.T01:intron 20.0%
!! GTTAGTAAACAAAGTTATAA+AGG - Chr7:72751348-72751367 None:intergenic 20.0%
!! TAGATTTCATCAATCTAAAA+AGG - Chr7:72755840-72755859 None:intergenic 20.0%
!! TAGTTGTTAGATTAGATATT+CGG - Chr7:72754338-72754357 None:intergenic 20.0%
!! TATTGAATTCACTAAATAAG+AGG + Chr7:72750453-72750472 MsG0780040074.01.T01:intron 20.0%
!! TCAATATAAAATAATTGAGG+CGG + Chr7:72751751-72751770 MsG0780040074.01.T01:intron 20.0%
!! TTTATAAATAAAAAAGGTGG+TGG - Chr7:72754499-72754518 None:intergenic 20.0%
!!! AAAAAGGAAATTGTTTTTCA+GGG + Chr7:72753351-72753370 MsG0780040074.01.T01:intron 20.0%
!!! AAATGTCTTATTGATAAACT+TGG + Chr7:72755068-72755087 MsG0780040074.01.T01:intron 20.0%
!!! AAGACATTTGACAAAATTTT+AGG - Chr7:72755057-72755076 None:intergenic 20.0%
!!! AATTCACTAAATATTGGTTT+TGG + Chr7:72752309-72752328 MsG0780040074.01.T01:intron 20.0%
!!! AATTTCTAGAAACGTTTTTA+AGG + Chr7:72752910-72752929 MsG0780040074.01.T01:intron 20.0%
!!! ATAGTTTTTCTTAGAAATTG+TGG - Chr7:72753977-72753996 None:intergenic 20.0%
!!! ATCTAAAAAGGTATATTACT+TGG - Chr7:72755828-72755847 None:intergenic 20.0%
!!! ATCTTTTTAGAAAATAAGAC+AGG + Chr7:72754276-72754295 MsG0780040074.01.T01:intron 20.0%
!!! ATTCACTAAATATTGGTTTT+GGG + Chr7:72752310-72752329 MsG0780040074.01.T01:intron 20.0%
!!! GATTTAAAAACTTTGAAAAC+AGG + Chr7:72755496-72755515 MsG0780040074.01.T01:intron 20.0%
!!! GATTTCAAATTTTTCAATAG+AGG - Chr7:72753330-72753349 None:intergenic 20.0%
!!! TAAAAAGGAAATTGTTTTTC+AGG + Chr7:72753350-72753369 MsG0780040074.01.T01:intron 20.0%
!!! TATCTTTTTTGTCACAATTA+TGG + Chr7:72752452-72752471 MsG0780040074.01.T01:intron 20.0%
!!! TCTTTTTAGAAAATAAGACA+GGG + Chr7:72754277-72754296 MsG0780040074.01.T01:intron 20.0%
!!! TGAACTTTTAAAAGGTTTTA+CGG - Chr7:72752819-72752838 None:intergenic 20.0%
!!! TTGTGAATGTACAATTTTTT+TGG + Chr7:72751127-72751146 MsG0780040074.01.T01:intron 20.0%
!!! TTTTTTGTTTTAGCAGAAAA+TGG + Chr7:72753108-72753127 MsG0780040074.01.T01:intron 20.0%
! AAAAAATTTCTCAAACCCTT+AGG - Chr7:72755407-72755426 None:intergenic 25.0%
! AAAGTCAAAGCATATTAAGA+AGG + Chr7:72752969-72752988 MsG0780040074.01.T01:CDS 25.0%
! AAATAGCATATGAGGAAATA+CGG - Chr7:72750729-72750748 None:intergenic 25.0%
! AACAACTGATTACTTTATCA+TGG + Chr7:72752639-72752658 MsG0780040074.01.T01:CDS 25.0%
! AACTAATCAAAGAAGAGTTT+GGG + Chr7:72754622-72754641 MsG0780040074.01.T01:CDS 25.0%
! AACTTGGTTAATGATTACAA+CGG + Chr7:72751609-72751628 MsG0780040074.01.T01:intron 25.0%
! AAGTACTTATGTTAGCTATA+TGG + Chr7:72754564-72754583 MsG0780040074.01.T01:intron 25.0%
! AATAATCTGTTATGAGAAGT+TGG + Chr7:72752766-72752785 MsG0780040074.01.T01:intron 25.0%
! AATCCTTCTAGGTTTATTAT+TGG + Chr7:72752259-72752278 MsG0780040074.01.T01:intron 25.0%
! AATGTAAATTGTAGAGAAAG+TGG - Chr7:72754883-72754902 None:intergenic 25.0%
! ACAAAGTTATAAAGGTAGTT+AGG - Chr7:72751340-72751359 None:intergenic 25.0%
! ACAATTATCCTATCAAATGT+CGG - Chr7:72753273-72753292 None:intergenic 25.0%
! AGTAATATGTTAGGAATTCA+TGG + Chr7:72751214-72751233 MsG0780040074.01.T01:intron 25.0%
! ATATGAAGGAGTAATATGTT+AGG + Chr7:72751205-72751224 MsG0780040074.01.T01:intron 25.0%
! ATCATTTACATAAATCTTGC+AGG + Chr7:72751787-72751806 MsG0780040074.01.T01:intron 25.0%
! ATGATTCAAAATAGCATATG+AGG - Chr7:72750737-72750756 None:intergenic 25.0%
! ATTCTTTATTCTAATGGAAC+AGG + Chr7:72754402-72754421 MsG0780040074.01.T01:CDS 25.0%
! CAAAATGCAATGATTCTTAT+TGG - Chr7:72755619-72755638 None:intergenic 25.0%
! CCTAGTTATTCTTAACAAAT+AGG - Chr7:72752698-72752717 None:intergenic 25.0%
! GACTTTAGTATCTATCTATT+TGG + Chr7:72755896-72755915 MsG0780040074.01.T01:intron 25.0%
! TAAATTCTTATAGGTCAAAG+AGG + Chr7:72754369-72754388 MsG0780040074.01.T01:intron 25.0%
! TAGGCTATTATCAATCATAA+TGG - Chr7:72752150-72752169 None:intergenic 25.0%
! TCTATATTCTGATTCTGTAA+TGG + Chr7:72751584-72751603 MsG0780040074.01.T01:intron 25.0%
! TCTTAAGCCATTTAAAAAAC+TGG + Chr7:72755255-72755274 MsG0780040074.01.T01:intron 25.0%
! TGGACAAAATCTATCTAAAA+AGG - Chr7:72755808-72755827 None:intergenic 25.0%
! TTAGATTCATCAACAGAAAT+GGG - Chr7:72751893-72751912 None:intergenic 25.0%
! TTATATATAACTTGGGATTG+TGG + Chr7:72750943-72750962 MsG0780040074.01.T01:intron 25.0%
! TTATGAGGTAAATGGATAAA+GGG - Chr7:72749707-72749726 None:intergenic 25.0%
! TTCTTTATTCTAATGGAACA+GGG + Chr7:72754403-72754422 MsG0780040074.01.T01:CDS 25.0%
! TTTATGAGGTAAATGGATAA+AGG - Chr7:72749708-72749727 None:intergenic 25.0%
! TTTCCAATAATAAACCTAGA+AGG - Chr7:72752265-72752284 None:intergenic 25.0%
!! ATATTATTTGTTGAGGCAAA+TGG - Chr7:72750698-72750717 None:intergenic 25.0%
!! ATATTTGTAGAAGCATGTTT+AGG + Chr7:72749975-72749994 MsG0780040074.01.T01:intron 25.0%
!! CAATTTACATTTCAAGTGAA+TGG + Chr7:72754892-72754911 MsG0780040074.01.T01:intron 25.0%
!! CCTATTTGTTAAGAATAACT+AGG + Chr7:72752695-72752714 MsG0780040074.01.T01:CDS 25.0%
!! CGTTTCTAGAAATTGAAAAA+AGG - Chr7:72752904-72752923 None:intergenic 25.0%
!! GTAAATACTTTTCCATAAAC+AGG - Chr7:72753876-72753895 None:intergenic 25.0%
!! TAGTTTTCCTTTTCACAATA+AGG - Chr7:72752565-72752584 None:intergenic 25.0%
!! TATTTGTAGAAGCATGTTTA+GGG + Chr7:72749976-72749995 MsG0780040074.01.T01:intron 25.0%
!! TCATTGTTGTTATTCTATTG+TGG + Chr7:72750769-72750788 MsG0780040074.01.T01:intron 25.0%
!! TTAATTTTTGCATGCTGTTA+TGG + Chr7:72750148-72750167 MsG0780040074.01.T01:intron 25.0%
!! TTCTAGAAATTGAAAAAAGG+AGG - Chr7:72752901-72752920 None:intergenic 25.0%
!! TTGACTGTGTAATCAAATTT+TGG - Chr7:72754105-72754124 None:intergenic 25.0%
!! TTGCAAGAAATTTGCATTTT+AGG + Chr7:72755001-72755020 MsG0780040074.01.T01:intron 25.0%
!! TTTGACAAAATTTTACTGCA+AGG - Chr7:72754933-72754952 None:intergenic 25.0%
!! TTTTCTTAGAAATTGTGGTT+GGG - Chr7:72753972-72753991 None:intergenic 25.0%
!! TTTTTCTTAGAAATTGTGGT+TGG - Chr7:72753973-72753992 None:intergenic 25.0%
!!! AAAAGGAAATTGTTTTTCAG+GGG + Chr7:72753352-72753371 MsG0780040074.01.T01:intron 25.0%
!!! AAACTTGGTAATTTTGATTC+TGG + Chr7:72755083-72755102 MsG0780040074.01.T01:intron 25.0%
!!! AACTTGGTAATTTTGATTCT+GGG + Chr7:72755084-72755103 MsG0780040074.01.T01:intron 25.0%
!!! ACTATTTTTTTATCTGATCG+AGG - Chr7:72752522-72752541 None:intergenic 25.0%
!!! GGAGTTCAGTTTTTTATATA+GGG + Chr7:72750169-72750188 MsG0780040074.01.T01:intron 25.0%
!!! TGAATGTACAATTTTTTTGG+TGG + Chr7:72751130-72751149 MsG0780040074.01.T01:intron 25.0%
!!! TGGAGTTCAGTTTTTTATAT+AGG + Chr7:72750168-72750187 MsG0780040074.01.T01:intron 25.0%
!!! TGTTTTTAAAGATGAGAGAA+AGG - Chr7:72750084-72750103 None:intergenic 25.0%
!!! TTGCTGATTTCTGTTTTATT+TGG + Chr7:72751981-72752000 MsG0780040074.01.T01:intron 25.0%
!!! TTTGATCTCTATTGATTTGA+TGG + Chr7:72752181-72752200 MsG0780040074.01.T01:intron 25.0%
AAATGTTTGCGATTGTGATT+TGG + Chr7:72750204-72750223 MsG0780040074.01.T01:intron 30.0%
AAATTGATGAAAGGTGAAAG+TGG - Chr7:72749648-72749667 None:intergenic 30.0%
AACATAGAGAGAAATTCCAA+AGG - Chr7:72749944-72749963 None:intergenic 30.0%
AACCAAATCAGAAAACAGTT+TGG + Chr7:72755169-72755188 MsG0780040074.01.T01:intron 30.0%
AATGATTCTTATTGGCACAT+TGG - Chr7:72755611-72755630 None:intergenic 30.0%
AATGTTTGCGATTGTGATTT+GGG + Chr7:72750205-72750224 MsG0780040074.01.T01:intron 30.0%
AATTGATGAAAGGTGAAAGT+GGG - Chr7:72749647-72749666 None:intergenic 30.0%
ACATAGAGAGAAATTCCAAA+GGG - Chr7:72749943-72749962 None:intergenic 30.0%
ACTAATCAAAGAAGAGTTTG+GGG + Chr7:72754623-72754642 MsG0780040074.01.T01:CDS 30.0%
ACTTCTGAGTTGTCTTAATT+TGG - Chr7:72749498-72749517 None:intergenic 30.0%
AGATCAAATTTCAATGAGCT+AGG - Chr7:72752169-72752188 None:intergenic 30.0%
AGTATTTGATCCATTAGTTC+AGG - Chr7:72753692-72753711 None:intergenic 30.0%
AGTGGGTAAATTAGAGAAAT+TGG + Chr7:72754674-72754693 MsG0780040074.01.T01:CDS 30.0%
ATAATTCTGTATATGCCCTT+TGG + Chr7:72749925-72749944 MsG0780040074.01.T01:intron 30.0%
ATAGGATAATTGTTGTCTAC+AGG + Chr7:72753280-72753299 MsG0780040074.01.T01:CDS 30.0%
ATGACATTGGCAAATCTTAT+TGG + Chr7:72749901-72749920 MsG0780040074.01.T01:CDS 30.0%
ATGATTCTTATTGGCACATT+GGG - Chr7:72755610-72755629 None:intergenic 30.0%
ATTGTACAATCTGCAAATTG+AGG + Chr7:72751686-72751705 MsG0780040074.01.T01:intron 30.0%
ATTGTGAGAACTGTTATAAG+TGG + Chr7:72753901-72753920 MsG0780040074.01.T01:intron 30.0%
ATTTGATCAATGAAGGTTCA+AGG - Chr7:72754981-72755000 None:intergenic 30.0%
CAATGGAAAATGACAACTTA+AGG + Chr7:72750489-72750508 MsG0780040074.01.T01:intron 30.0%
CAGGAAATGAATTGAAAACA+AGG + Chr7:72755515-72755534 MsG0780040074.01.T01:intron 30.0%
CATATTAAGAAGGATTCAGA+TGG + Chr7:72752979-72752998 MsG0780040074.01.T01:CDS 30.0%
CTTAAGTCCTTATTGTGAAA+AGG + Chr7:72752555-72752574 MsG0780040074.01.T01:intron 30.0%
CTTAGATTCATCAACAGAAA+TGG - Chr7:72751894-72751913 None:intergenic 30.0%
CTTGCAAATTTGATCAATGA+AGG - Chr7:72754988-72755007 None:intergenic 30.0%
GAACTAATCAAAGAAGAGTT+TGG + Chr7:72754621-72754640 MsG0780040074.01.T01:CDS 30.0%
GAATTAATCACACACAACAA+AGG - Chr7:72752294-72752313 None:intergenic 30.0%
GACATAAGTTATTACTTGCA+AGG + Chr7:72750547-72750566 MsG0780040074.01.T01:intron 30.0%
GAGGAATTGATTGAATACAA+TGG + Chr7:72750472-72750491 MsG0780040074.01.T01:intron 30.0%
GAGTCATTAAAAATCCTTCT+AGG + Chr7:72752248-72752267 MsG0780040074.01.T01:intron 30.0%
GTCTTGAAAATATGCAACTA+AGG + Chr7:72753055-72753074 MsG0780040074.01.T01:CDS 30.0%
GTGGGTAAATTAGAGAAATT+GGG + Chr7:72754675-72754694 MsG0780040074.01.T01:CDS 30.0%
TAACTGAGTCGAAATCAATT+AGG - Chr7:72751661-72751680 None:intergenic 30.0%
TACATAAATCTTGCAGGTAA+TGG + Chr7:72751793-72751812 MsG0780040074.01.T01:intron 30.0%
TAGATTGATGAAATCTATGC+TGG + Chr7:72755843-72755862 MsG0780040074.01.T01:intron 30.0%
TCAAGTACATCAATTTCTTC+AGG - Chr7:72751058-72751077 None:intergenic 30.0%
TTACTTTATCATGGAGAAAC+TGG + Chr7:72752648-72752667 MsG0780040074.01.T01:CDS 30.0%
TTGAAGAATTCACAACCTAA+GGG + Chr7:72755389-72755408 MsG0780040074.01.T01:intron 30.0%
TTGTGAGAACTGTTATAAGT+GGG + Chr7:72753902-72753921 MsG0780040074.01.T01:intron 30.0%
TTGTTAACTGTTCCTGTTTA+TGG + Chr7:72753861-72753880 MsG0780040074.01.T01:intron 30.0%
TTTAGAAAGAACCAATGACA+AGG - Chr7:72752362-72752381 None:intergenic 30.0%
TTTCTTGACATACCTATTTC+AGG + Chr7:72751084-72751103 MsG0780040074.01.T01:CDS 30.0%
TTTGAAGAATTCACAACCTA+AGG + Chr7:72755388-72755407 MsG0780040074.01.T01:intron 30.0%
! AAATTTTACTGCAAGGTTCA+AGG - Chr7:72754926-72754945 None:intergenic 30.0%
! AACATTTTCTGATACCAAAC+AGG + Chr7:72755583-72755602 MsG0780040074.01.T01:intron 30.0%
! AACCAAACTGTTTTCTGATT+TGG - Chr7:72755174-72755193 None:intergenic 30.0%
! AAGCGTTTTTATGAGGTAAA+TGG - Chr7:72749715-72749734 None:intergenic 30.0%
! CAAAGAATCAGTTTTTGAAC+TGG - Chr7:72755304-72755323 None:intergenic 30.0%
! CAGTTCAAAAACTGATTCTT+TGG + Chr7:72755302-72755321 MsG0780040074.01.T01:intron 30.0%
! CATTTCTGTTGATGAATCTA+AGG + Chr7:72751892-72751911 MsG0780040074.01.T01:CDS 30.0%
! TGAAAACAAGGTGATAGTTT+TGG + Chr7:72755527-72755546 MsG0780040074.01.T01:intron 30.0%
! TGATTCTGTAATGGAAAACT+TGG + Chr7:72751593-72751612 MsG0780040074.01.T01:intron 30.0%
! TGGCATGATATTATTTGTTG+AGG - Chr7:72750705-72750724 None:intergenic 30.0%
! TGTAATTTTCAGCAGTATCT+AGG + Chr7:72750291-72750310 MsG0780040074.01.T01:intron 30.0%
! TGTGATTTTGAATGCAACTT+TGG - Chr7:72749614-72749633 None:intergenic 30.0%
! TGTTGCTGAAACTTTTCAAA+GGG + Chr7:72749781-72749800 MsG0780040074.01.T01:intron 30.0%
! TTTTCATCATCCTGAACTAA+TGG + Chr7:72753679-72753698 MsG0780040074.01.T01:intron 30.0%
!! ATCTCTATTGATTTGATGGA+TGG + Chr7:72752185-72752204 MsG0780040074.01.T01:intron 30.0%
!! ATTTTGAATGTGTGATGATG+TGG + Chr7:72753178-72753197 MsG0780040074.01.T01:intron 30.0%
!! GCATTTTAAGAACATTCCAA+TGG + Chr7:72753417-72753436 MsG0780040074.01.T01:CDS 30.0%
!!! AAACCAGCCAGTTTTTTAAA+TGG - Chr7:72755265-72755284 None:intergenic 30.0%
!!! AAATATTGGTTTTGGGAGAA+GGG + Chr7:72752317-72752336 MsG0780040074.01.T01:intron 30.0%
!!! AACTGTTTTCTGATTTGGTT+CGG - Chr7:72755169-72755188 None:intergenic 30.0%
!!! TAAAAAACTGGCTGGTTTTA+TGG + Chr7:72755267-72755286 MsG0780040074.01.T01:intron 30.0%
!!! TAAATATTGGTTTTGGGAGA+AGG + Chr7:72752316-72752335 MsG0780040074.01.T01:intron 30.0%
!!! TCTGTTGGCTTTTTTCATTT+TGG + Chr7:72752226-72752245 MsG0780040074.01.T01:intron 30.0%
AAAAGGGCAAATGAGATCAT+TGG + Chr7:72756223-72756242 MsG0780040074.01.T01:CDS 35.0%
AAAGAGAAACTGAGGAAGAA+TGG + Chr7:72751554-72751573 MsG0780040074.01.T01:intron 35.0%
AAAGGGCTAAATCCTTACAA+GGG - Chr7:72750382-72750401 None:intergenic 35.0%
AAGCCATTTAAAAAACTGGC+TGG + Chr7:72755259-72755278 MsG0780040074.01.T01:intron 35.0%
AATCCATTGGAGTTAATCCA+GGG - Chr7:72753588-72753607 None:intergenic 35.0%
AATTGTGTACTCTACTCTCT+TGG - Chr7:72750851-72750870 None:intergenic 35.0%
ACAAGAAGTAAGTGTTAGCT+TGG + Chr7:72754189-72754208 MsG0780040074.01.T01:intron 35.0%
ACGATAAGAAGTGAAAAGTG+TGG + Chr7:72751482-72751501 MsG0780040074.01.T01:intron 35.0%
ACTATTTCCATATCAGCCAT+TGG - Chr7:72753436-72753455 None:intergenic 35.0%
ACTCAAGTCATACATCTAGT+TGG + Chr7:72755982-72756001 MsG0780040074.01.T01:intron 35.0%
AGACTGGAAAGTTACTGTTA+TGG + Chr7:72752731-72752750 MsG0780040074.01.T01:intron 35.0%
AGAGAAATGATGATCACTGA+GGG - Chr7:72750625-72750644 None:intergenic 35.0%
AGCTAAAGCAACCTCAATTA+TGG - Chr7:72750262-72750281 None:intergenic 35.0%
AGGTCTTGCCAAGTAAATTA+CGG - Chr7:72753239-72753258 None:intergenic 35.0%
AGTGATTCATGTTGGAATTC+AGG + Chr7:72756168-72756187 MsG0780040074.01.T01:intron 35.0%
ATCATCATCATCACTTGCAA+CGG - Chr7:72749539-72749558 None:intergenic 35.0%
ATGAGTCTAGGTTTGAGAAT+TGG - Chr7:72749880-72749899 None:intergenic 35.0%
ATGGATCAAATACTCTTTGC+AGG + Chr7:72753698-72753717 MsG0780040074.01.T01:intron 35.0%
ATTGGTCGATATCAATGTGT+TGG + Chr7:72756196-72756215 MsG0780040074.01.T01:CDS 35.0%
CAGATTTCTCTGATAAGGTA+TGG + Chr7:72752068-72752087 MsG0780040074.01.T01:intron 35.0%
CATACCTTATCAGAGAAATC+TGG - Chr7:72752070-72752089 None:intergenic 35.0%
CATTAGTGCACGTTTCAAAA+CGG - Chr7:72756046-72756065 None:intergenic 35.0%
CCAAGTAACAATGGCATTAA+AGG - Chr7:72751937-72751956 None:intergenic 35.0%
CCTTTAATGCCATTGTTACT+TGG + Chr7:72751934-72751953 MsG0780040074.01.T01:intron 35.0%
CGAATAACTTCATTCTTGTG+CGG - Chr7:72749835-72749854 None:intergenic 35.0%
CGCAGACATATACAAACAAT+TGG + Chr7:72750414-72750433 MsG0780040074.01.T01:intron 35.0%
CTACATAGTTAACAGTTGTG+TGG + Chr7:72754030-72754049 MsG0780040074.01.T01:intron 35.0%
CTACTATGCTCTTTCATTGA+AGG - Chr7:72750057-72750076 None:intergenic 35.0%
CTCAAGATAGTACCTGAAAT+AGG - Chr7:72751099-72751118 None:intergenic 35.0%
CTGAAAAGAAAGAGAAACTG+AGG + Chr7:72751546-72751565 MsG0780040074.01.T01:intron 35.0%
CTTACCAAAATGCTTTGCTT+GGG + Chr7:72753140-72753159 MsG0780040074.01.T01:intron 35.0%
GAAACTAGGAAATCCTTGAT+GGG - Chr7:72752120-72752139 None:intergenic 35.0%
GAATGACATCATCACACAAA+TGG - Chr7:72754168-72754187 None:intergenic 35.0%
GACAATATAACCAACTACTG+TGG - Chr7:72753787-72753806 None:intergenic 35.0%
GAGCCAAACGATATTAAGTT+TGG + Chr7:72755199-72755218 MsG0780040074.01.T01:intron 35.0%
GATGGCATTTAAATGTCCTA+AGG + Chr7:72752203-72752222 MsG0780040074.01.T01:intron 35.0%
GATTAATGATGCCTTGTCAT+TGG + Chr7:72752348-72752367 MsG0780040074.01.T01:intron 35.0%
GCACCAAACTTAATATCGTT+TGG - Chr7:72755205-72755224 None:intergenic 35.0%
GCTATATGGTATTGTGAATC+AGG + Chr7:72754578-72754597 MsG0780040074.01.T01:intron 35.0%
GTAGCCTAAAATTACCATTG+TGG - Chr7:72755027-72755046 None:intergenic 35.0%
GTCAATGTATGACAAACAAC+TGG + Chr7:72754120-72754139 MsG0780040074.01.T01:CDS 35.0%
TAACAGTTTGTACCCTTGTA+AGG + Chr7:72750367-72750386 MsG0780040074.01.T01:intron 35.0%
TACTGTCATACTGAAGAAAG+TGG - Chr7:72751525-72751544 None:intergenic 35.0%
TAGAGAAATGATGATCACTG+AGG - Chr7:72750626-72750645 None:intergenic 35.0%
TCAAGCATTCCAAGTAACAA+TGG - Chr7:72751946-72751965 None:intergenic 35.0%
TCAAGGATTTCCTAGTTTCA+TGG + Chr7:72752121-72752140 MsG0780040074.01.T01:intron 35.0%
TCAAGTCCTCAAATTGTAGA+AGG - Chr7:72750885-72750904 None:intergenic 35.0%
TCTACAATTTGAGGACTTGA+TGG + Chr7:72750885-72750904 MsG0780040074.01.T01:CDS 35.0%
TCTTACCAAAATGCTTTGCT+TGG + Chr7:72753139-72753158 MsG0780040074.01.T01:intron 35.0%
TGAAACTAGGAAATCCTTGA+TGG - Chr7:72752121-72752140 None:intergenic 35.0%
TGGGAAGATTTAGAAGATAC+TGG - Chr7:72751874-72751893 None:intergenic 35.0%
TGTGAGAACTGTTATAAGTG+GGG + Chr7:72753903-72753922 MsG0780040074.01.T01:intron 35.0%
TTAAATGTCCTAAGGTCTGT+TGG + Chr7:72752211-72752230 MsG0780040074.01.T01:intron 35.0%
TTGGTACCTTCTACAATTTG+AGG + Chr7:72750876-72750895 MsG0780040074.01.T01:CDS 35.0%
TTGGTCGATATCAATGTGTT+GGG + Chr7:72756197-72756216 MsG0780040074.01.T01:CDS 35.0%
TTTAGAAAATAAGACAGGGC+TGG + Chr7:72754281-72754300 MsG0780040074.01.T01:intron 35.0%
TTTCTTGTATCAGCAGTTGT+TGG + Chr7:72753616-72753635 MsG0780040074.01.T01:intron 35.0%
! AATCCAGGGTTTTTCTTTTC+TGG - Chr7:72753574-72753593 None:intergenic 35.0%
! ATTTGCATTTTAGGCCACAA+TGG + Chr7:72755010-72755029 MsG0780040074.01.T01:intron 35.0%
! CTGAAACTTTTCAAAGGGTA+TGG + Chr7:72749786-72749805 MsG0780040074.01.T01:intron 35.0%
! CTGTTGCTGAAACTTTTCAA+AGG + Chr7:72749780-72749799 MsG0780040074.01.T01:intron 35.0%
! GGTAATTTTAGGCTACATTG+TGG + Chr7:72755031-72755050 MsG0780040074.01.T01:intron 35.0%
! GTCTTTGCTAAAGATGGTTT+TGG + Chr7:72751257-72751276 MsG0780040074.01.T01:intron 35.0%
! TAAAGTTGCTGAAGGCATAA+AGG - Chr7:72750980-72750999 None:intergenic 35.0%
! TAGGCCACAATGGTAATTTT+AGG + Chr7:72755020-72755039 MsG0780040074.01.T01:intron 35.0%
! TATACTATACCACGGGTTTT+TGG + Chr7:72751415-72751434 MsG0780040074.01.T01:intron 35.0%
! TGGATTAACTCCAATGGATT+GGG + Chr7:72753588-72753607 MsG0780040074.01.T01:intron 35.0%
! TGTTGACTAGTGATTCATGT+TGG + Chr7:72756160-72756179 MsG0780040074.01.T01:intron 35.0%
! TTCGGTTTTCTTTACTGAAC+AGG - Chr7:72755151-72755170 None:intergenic 35.0%
! TTCTGCTTTAGATTTGGTAC+TGG - Chr7:72753380-72753399 None:intergenic 35.0%
! TTTAAGGCTGTGATTCTTAC+AGG + Chr7:72752926-72752945 MsG0780040074.01.T01:intron 35.0%
! TTTTCCATCAACAACCACAA+TGG + Chr7:72753517-72753536 MsG0780040074.01.T01:intron 35.0%
!! ATAATGGACACCATGAAACT+AGG - Chr7:72752134-72752153 None:intergenic 35.0%
!! CAACTTTAAGATAGTGACTG+CGG + Chr7:72751823-72751842 MsG0780040074.01.T01:CDS 35.0%
!! TATCTAAAAAGGTGTCACAG+TGG - Chr7:72755797-72755816 None:intergenic 35.0%
!!! AATATTGGTTTTGGGAGAAG+GGG + Chr7:72752318-72752337 MsG0780040074.01.T01:intron 35.0%
!!! CTGTGTTTTTTTTCCTCCAT+AGG + Chr7:72754056-72754075 MsG0780040074.01.T01:intron 35.0%
!!! GTAAAGGAAGCGTTTTTATG+AGG - Chr7:72749722-72749741 None:intergenic 35.0%
!!! TTTTGAAACGTGCACTAATG+TGG + Chr7:72756046-72756065 MsG0780040074.01.T01:intron 35.0%
AAACCCTGGATTAACTCCAA+TGG + Chr7:72753582-72753601 MsG0780040074.01.T01:intron 40.0%
AATCAAAGAAGAGTTTGGGG+AGG + Chr7:72754626-72754645 MsG0780040074.01.T01:CDS 40.0%
ACAACCACAATGGATGACTT+TGG + Chr7:72753527-72753546 MsG0780040074.01.T01:intron 40.0%
ACAACGGAATGAGTATCTGT+AGG + Chr7:72751625-72751644 MsG0780040074.01.T01:intron 40.0%
ACCTAGACTCATCATGACAT+TGG + Chr7:72749888-72749907 MsG0780040074.01.T01:CDS 40.0%
ACGAGAGTCTTTGCTAAAGA+TGG + Chr7:72751251-72751270 MsG0780040074.01.T01:intron 40.0%
ACTGCACGTATACTATACCA+CGG + Chr7:72751407-72751426 MsG0780040074.01.T01:intron 40.0%
AGAAACTTGACCCAATCCAT+TGG - Chr7:72753601-72753620 None:intergenic 40.0%
AGAGCTTCAAAAACTCAGCT+CGG - Chr7:72750828-72750847 None:intergenic 40.0%
AGCATATGAGGAAATACGGT+TGG - Chr7:72750725-72750744 None:intergenic 40.0%
AGCTAGTGATCCTAAAACCA+AGG - Chr7:72750669-72750688 None:intergenic 40.0%
AGGTAAGCAAACTCTTAGAC+TGG + Chr7:72752715-72752734 MsG0780040074.01.T01:intron 40.0%
ATCAATGTGTTGGGCTCAAA+AGG + Chr7:72756206-72756225 MsG0780040074.01.T01:CDS 40.0%
ATCCTAAAACCAAGGAAGCT+TGG - Chr7:72750661-72750680 None:intergenic 40.0%
CAAAGGGCTAAATCCTTACA+AGG - Chr7:72750383-72750402 None:intergenic 40.0%
CAACGGAATGAGTATCTGTA+GGG + Chr7:72751626-72751645 MsG0780040074.01.T01:intron 40.0%
CAATCCATTGGAGTTAATCC+AGG - Chr7:72753589-72753608 None:intergenic 40.0%
CCATAGGTTCCAACAAAACT+TGG + Chr7:72754072-72754091 MsG0780040074.01.T01:intron 40.0%
CCTTATCAGAGAAATCTGGA+AGG - Chr7:72752066-72752085 None:intergenic 40.0%
CCTTCCAGATTTCTCTGATA+AGG + Chr7:72752063-72752082 MsG0780040074.01.T01:CDS 40.0%
CTAACACAAACCCACAAAAC+CGG - Chr7:72753948-72753967 None:intergenic 40.0%
CTGCGTTCAACAATTGCAAA+GGG - Chr7:72750399-72750418 None:intergenic 40.0%
CTGGATTAACTCCAATGGAT+TGG + Chr7:72753587-72753606 MsG0780040074.01.T01:intron 40.0%
GAAAAAAGCCAACAGACCTT+AGG - Chr7:72752222-72752241 None:intergenic 40.0%
GAACATTCCAATGGCTGATA+TGG + Chr7:72753426-72753445 MsG0780040074.01.T01:CDS 40.0%
GGTCTTGCCAAGTAAATTAC+GGG - Chr7:72753238-72753257 None:intergenic 40.0%
GTGAGAACTGTTATAAGTGG+GGG + Chr7:72753904-72753923 MsG0780040074.01.T01:intron 40.0%
GTTGGAATTCAGGATTCGAT+TGG + Chr7:72756178-72756197 MsG0780040074.01.T01:CDS 40.0%
TAACACAAACCCACAAAACC+GGG - Chr7:72753947-72753966 None:intergenic 40.0%
TAGAGTACACAATTCGAGCT+TGG + Chr7:72750857-72750876 MsG0780040074.01.T01:CDS 40.0%
TAGTATGTTATCTTTCGGCG+TGG + Chr7:72752601-72752620 MsG0780040074.01.T01:intron 40.0%
TAGTTCACTCGAAATGCCTT+CGG + Chr7:72753731-72753750 MsG0780040074.01.T01:CDS 40.0%
TATGACAAACAACTGGACAG+CGG + Chr7:72754127-72754146 MsG0780040074.01.T01:CDS 40.0%
TCAATGTGTTGGGCTCAAAA+GGG + Chr7:72756207-72756226 MsG0780040074.01.T01:CDS 40.0%
TCATCCATTGTGGTTGTTGA+TGG - Chr7:72753524-72753543 None:intergenic 40.0%
TCCAAGAACCGACATTTGAT+AGG + Chr7:72753262-72753281 MsG0780040074.01.T01:CDS 40.0%
TCTGCGTTCAACAATTGCAA+AGG - Chr7:72750400-72750419 None:intergenic 40.0%
TGTACCAAAGTCATCCATTG+TGG - Chr7:72753534-72753553 None:intergenic 40.0%
TGTCTCTACGACCATAATTG+AGG + Chr7:72750248-72750267 MsG0780040074.01.T01:intron 40.0%
TTTGATGTGGATGATGCAGT+GGG + Chr7:72754657-72754676 MsG0780040074.01.T01:CDS 40.0%
! AAAGGGTGTAAGAAACAGAG+AGG - Chr7:72749690-72749709 None:intergenic 40.0%
! ACATGCTCATTGGACGATTT+TGG + Chr7:72752671-72752690 MsG0780040074.01.T01:CDS 40.0%
! ACCAAATCTAAAGCAGAACG+AGG + Chr7:72753382-72753401 MsG0780040074.01.T01:CDS 40.0%
! AGAAATTGGGTATCGTCACT+CGG + Chr7:72754688-72754707 MsG0780040074.01.T01:CDS 40.0%
! CATGCTCATTGGACGATTTT+GGG + Chr7:72752672-72752691 MsG0780040074.01.T01:CDS 40.0%
! CGTCAATTTTCTTCATACCC+CGG + Chr7:72750599-72750618 MsG0780040074.01.T01:intron 40.0%
! TCCTCGTTCTGCTTTAGATT+TGG - Chr7:72753386-72753405 None:intergenic 40.0%
! TTTTGATGTGGATGATGCAG+TGG + Chr7:72754656-72754675 MsG0780040074.01.T01:CDS 40.0%
!! AAATGTCGGTTCTTGGATCA+AGG - Chr7:72753259-72753278 None:intergenic 40.0%
!! ATCCAAGCTTCCTTGGTTTT+AGG + Chr7:72750656-72750675 MsG0780040074.01.T01:intron 40.0%
!! CAGACTGATTGAAAGCATCA+AGG + Chr7:72755679-72755698 MsG0780040074.01.T01:intron 40.0%
!! CGATATTAAGTTTGGTGCTC+AGG + Chr7:72755207-72755226 MsG0780040074.01.T01:intron 40.0%
!! GATACCCAAGCAAAGCATTT+TGG - Chr7:72753147-72753166 None:intergenic 40.0%
!! GGTATTGAGCCAAGTTTTGT+TGG - Chr7:72754084-72754103 None:intergenic 40.0%
!! TCCTATCAAATGTCGGTTCT+TGG - Chr7:72753266-72753285 None:intergenic 40.0%
!!! AGTTTTGTTGGAACCTATGG+AGG - Chr7:72754072-72754091 None:intergenic 40.0%
!!! CCAAGTTTTGTTGGAACCTA+TGG - Chr7:72754075-72754094 None:intergenic 40.0%
AAACAACTGGACAGCGGAAA+GGG + Chr7:72754133-72754152 MsG0780040074.01.T01:CDS 45.0%
AAATGATCCGTGATGCGACT+GGG + Chr7:72753007-72753026 MsG0780040074.01.T01:CDS 45.0%
AAATGATGATCACTGAGGGC+CGG - Chr7:72750621-72750640 None:intergenic 45.0%
ACAGGGTAAAGCTACAAGAC+AGG + Chr7:72754420-72754439 MsG0780040074.01.T01:CDS 45.0%
ACTTGCAACGGTGAGTTTCA+GGG - Chr7:72749527-72749546 None:intergenic 45.0%
AGAGGGAGTAAAGTTGCTGA+AGG - Chr7:72750988-72751007 None:intergenic 45.0%
ATGCACAATCCAAGCTTCCT+TGG + Chr7:72750649-72750668 MsG0780040074.01.T01:intron 45.0%
CAGCCAGAAAAGAAAAACCC+TGG + Chr7:72753568-72753587 MsG0780040074.01.T01:intron 45.0%
CATCAATTTCTTCAGGAGCC+AGG - Chr7:72751051-72751070 None:intergenic 45.0%
CTGCACGTATACTATACCAC+GGG + Chr7:72751408-72751427 MsG0780040074.01.T01:intron 45.0%
CTTCAAAAACTCAGCTCGGT+CGG - Chr7:72750824-72750843 None:intergenic 45.0%
CTTGTGCTCAAAGCAAGACA+GGG + Chr7:72756262-72756281 MsG0780040074.01.T01:CDS 45.0%
GAAACGTGCACTAATGTGGA+AGG + Chr7:72756050-72756069 MsG0780040074.01.T01:intron 45.0%
GAAACTGAGGAAGAATGGTG+AGG + Chr7:72751559-72751578 MsG0780040074.01.T01:intron 45.0%
GAGAAACTGGACATGCTCAT+TGG + Chr7:72752661-72752680 MsG0780040074.01.T01:CDS 45.0%
GAGATTGAGGTTGCACATTC+AGG + Chr7:72751848-72751867 MsG0780040074.01.T01:CDS 45.0%
GCCAATGTCATGATGAGTCT+AGG - Chr7:72749892-72749911 None:intergenic 45.0%
GCTGTTCTTTCCACAGTAGT+TGG + Chr7:72753774-72753793 MsG0780040074.01.T01:CDS 45.0%
GGCACAAGAATCACAAGCAA+TGG + Chr7:72749807-72749826 MsG0780040074.01.T01:CDS 45.0%
GTAGTAGCTCTTACCCATCA+AGG + Chr7:72752104-72752123 MsG0780040074.01.T01:intron 45.0%
GTTAGTCCCTAACGTGAAGA+GGG - Chr7:72756024-72756043 None:intergenic 45.0%
TCAACACCCTCTTCACGTTA+GGG + Chr7:72756015-72756034 MsG0780040074.01.T01:intron 45.0%
TCCAGCTCCCGTAATTTACT+TGG + Chr7:72753228-72753247 MsG0780040074.01.T01:intron 45.0%
TCCCTCTTTGATCCTGTAAG+CGG + Chr7:72751001-72751020 MsG0780040074.01.T01:CDS 45.0%
TGAATCAGGATCTCGATCAC+TGG + Chr7:72754592-72754611 MsG0780040074.01.T01:intron 45.0%
TGTATCAGCAGTTGTTGGAC+TGG + Chr7:72753621-72753640 MsG0780040074.01.T01:intron 45.0%
TTAAATTGCGGTCGCAGCAA+TGG - Chr7:72750335-72750354 None:intergenic 45.0%
TTATCTTTCGGCGTGGCATT+GGG + Chr7:72752608-72752627 MsG0780040074.01.T01:CDS 45.0%
TTTGAGCACAAGCTCTTCAG+TGG - Chr7:72756254-72756273 None:intergenic 45.0%
! ACTTTGGTTTCTTCGCAGGT+TGG - Chr7:72749598-72749617 None:intergenic 45.0%
! GAAATTGGGTATCGTCACTC+GGG + Chr7:72754689-72754708 MsG0780040074.01.T01:CDS 45.0%
! GGGATGACTTTGTTGTGGAA+CGG + Chr7:72753028-72753047 MsG0780040074.01.T01:CDS 45.0%
! TAAGTTGGAACAGCAGAACC+TGG + Chr7:72751030-72751049 MsG0780040074.01.T01:CDS 45.0%
! TGCAACTTTGGTTTCTTCGC+AGG - Chr7:72749602-72749621 None:intergenic 45.0%
!! ACTATACCACGGGTTTTTGG+TGG + Chr7:72751418-72751437 MsG0780040074.01.T01:intron 45.0%
!! ACTTGCAAGGAGAGTACCAA+AGG + Chr7:72750560-72750579 MsG0780040074.01.T01:intron 45.0%
!! CGGTTTTGTGGGTTTGTGTT+AGG + Chr7:72753946-72753965 MsG0780040074.01.T01:intron 45.0%
!! CTTGCAAGGAGAGTACCAAA+GGG + Chr7:72750561-72750580 MsG0780040074.01.T01:intron 45.0%
!! GGAGGAATGCGATTTTGATG+TGG + Chr7:72754644-72754663 MsG0780040074.01.T01:CDS 45.0%
!! ATAGAATTTATAAATAAAAA+AGG - Chr7:72754505-72754524 None:intergenic 5.0%
AAATGCCTTCGGCTGATTGG+TGG + Chr7:72753742-72753761 MsG0780040074.01.T01:CDS 50.0%
AACTTATGTGCCCCGCTTAC+AGG - Chr7:72751016-72751035 None:intergenic 50.0%
AAGGAGGCTCAAGATGAAGC+TGG - Chr7:72752885-72752904 None:intergenic 50.0%
AAGTCTCTCCTCTCTCCCTT+TGG - Chr7:72750579-72750598 None:intergenic 50.0%
AATGATCCGTGATGCGACTG+GGG + Chr7:72753008-72753027 MsG0780040074.01.T01:CDS 50.0%
AATGATGATCACTGAGGGCC+GGG - Chr7:72750620-72750639 None:intergenic 50.0%
AATGCCTTCGGCTGATTGGT+GGG + Chr7:72753743-72753762 MsG0780040074.01.T01:CDS 50.0%
AGTGACTGCGGATGAGATTG+AGG + Chr7:72751835-72751854 MsG0780040074.01.T01:CDS 50.0%
CAAAACCGGGTTGTGAGGTA+AGG - Chr7:72753934-72753953 None:intergenic 50.0%
CAAACAACTGGACAGCGGAA+AGG + Chr7:72754132-72754151 MsG0780040074.01.T01:CDS 50.0%
CAAATTGAGGCACACTGAGG+CGG + Chr7:72751699-72751718 MsG0780040074.01.T01:intron 50.0%
CACTTGCAACGGTGAGTTTC+AGG - Chr7:72749528-72749547 None:intergenic 50.0%
CCCGCTTACAGGATCAAAGA+GGG - Chr7:72751005-72751024 None:intergenic 50.0%
CCCTCTTTGATCCTGTAAGC+GGG + Chr7:72751002-72751021 MsG0780040074.01.T01:CDS 50.0%
CCTCTTTGATCCTGTAAGCG+GGG + Chr7:72751003-72751022 MsG0780040074.01.T01:CDS 50.0%
CTCAACACCCTCTTCACGTT+AGG + Chr7:72756014-72756033 MsG0780040074.01.T01:intron 50.0%
CTGCAAATTGAGGCACACTG+AGG + Chr7:72751696-72751715 MsG0780040074.01.T01:intron 50.0%
CTTGCAACGGTGAGTTTCAG+GGG - Chr7:72749526-72749545 None:intergenic 50.0%
GAAATGATCCGTGATGCGAC+TGG + Chr7:72753006-72753025 MsG0780040074.01.T01:CDS 50.0%
GACTGGGGATGACTTTGTTG+TGG + Chr7:72753023-72753042 MsG0780040074.01.T01:CDS 50.0%
GCAATCCTTACCTCACAACC+CGG + Chr7:72753926-72753945 MsG0780040074.01.T01:intron 50.0%
GCCAAGTAAATTACGGGAGC+TGG - Chr7:72753232-72753251 None:intergenic 50.0%
GCTTGTGCTCAAAGCAAGAC+AGG + Chr7:72756261-72756280 MsG0780040074.01.T01:CDS 50.0%
GTTATCTTTCGGCGTGGCAT+TGG + Chr7:72752607-72752626 MsG0780040074.01.T01:CDS 50.0%
TATCTTTCGGCGTGGCATTG+GGG + Chr7:72752609-72752628 MsG0780040074.01.T01:CDS 50.0%
TCGAAATGCCTTCGGCTGAT+TGG + Chr7:72753739-72753758 MsG0780040074.01.T01:CDS 50.0%
TGGTGTGGTGTCTGTATGTG+TGG + Chr7:72751438-72751457 MsG0780040074.01.T01:intron 50.0%
TGTAAGCGGGGCACATAAGT+TGG + Chr7:72751015-72751034 MsG0780040074.01.T01:CDS 50.0%
TTGGCACATTGGGACCTGTT+TGG - Chr7:72755600-72755619 None:intergenic 50.0%
! GGTTAGTCCCTAACGTGAAG+AGG - Chr7:72756025-72756044 None:intergenic 50.0%
! TACCTCACAACCCGGTTTTG+TGG + Chr7:72753934-72753953 MsG0780040074.01.T01:intron 50.0%
! TGATTTGGGTCGCAACATCG+TGG + Chr7:72750219-72750238 MsG0780040074.01.T01:intron 50.0%
!! ACCTCACAACCCGGTTTTGT+GGG + Chr7:72753935-72753954 MsG0780040074.01.T01:intron 50.0%
ACCACACCACCAAAAACCCG+TGG - Chr7:72751427-72751446 None:intergenic 55.0%
ACCCACAAAACCGGGTTGTG+AGG - Chr7:72753939-72753958 None:intergenic 55.0%
AGTCATCCCCAGTCGCATCA+CGG - Chr7:72753017-72753036 None:intergenic 55.0%
ATGACCCACCAATCAGCCGA+AGG - Chr7:72753750-72753769 None:intergenic 55.0%
ATGATGATCACTGAGGGCCG+GGG - Chr7:72750619-72750638 None:intergenic 55.0%
CCCCGCTTACAGGATCAAAG+AGG - Chr7:72751006-72751025 None:intergenic 55.0%
GAGCACAAGCTCTTCAGTGG+TGG - Chr7:72756251-72756270 None:intergenic 55.0%
GGATCTCGATCACTGGTGTG+AGG + Chr7:72754599-72754618 MsG0780040074.01.T01:intron 55.0%
!! GGAGAGTACCAAAGGGAGAG+AGG + Chr7:72750568-72750587 MsG0780040074.01.T01:intron 55.0%
!! TTTTGGGAGAAGGGGAGAGG+GGG + Chr7:72752326-72752345 MsG0780040074.01.T01:intron 55.0%
!!! ACCACGGGTTTTTGGTGGTG+TGG + Chr7:72751423-72751442 MsG0780040074.01.T01:intron 55.0%
!!! GGTTTTGGGAGAAGGGGAGA+GGG + Chr7:72752324-72752343 MsG0780040074.01.T01:intron 55.0%
!!! GTTTTGGGAGAAGGGGAGAG+GGG + Chr7:72752325-72752344 MsG0780040074.01.T01:intron 55.0%
!!! TGGTTTTGGGAGAAGGGGAG+AGG + Chr7:72752323-72752342 MsG0780040074.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 72749466 72756300 72749466 ID=MsG0780040074.01;Name=MsG0780040074.01
Chr7 mRNA 72749466 72756300 72749466 ID=MsG0780040074.01.T01;Parent=MsG0780040074.01;Name=MsG0780040074.01.T01;_AED=0.39;_eAED=0.41;_QI=175|0.85|0.86|1|0.85|0.73|15|0|480
Chr7 exon 72749466 72749637 72749466 ID=MsG0780040074.01.T01:exon:12911;Parent=MsG0780040074.01.T01
Chr7 exon 72749802 72749922 72749802 ID=MsG0780040074.01.T01:exon:12912;Parent=MsG0780040074.01.T01
Chr7 five_prime_UTR 72749466 72749637 72749466 ID=MsG0780040074.01.T01:five_prime_utr;Parent=MsG0780040074.01.T01
Chr7 five_prime_UTR 72749802 72749804 72749802 ID=MsG0780040074.01.T01:five_prime_utr;Parent=MsG0780040074.01.T01
Chr7 CDS 72749805 72749922 72749805 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72750812 72750906 72750812 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72750992 72751105 72750992 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72751809 72751913 72751809 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72752013 72752084 72752013 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72752604 72752716 72752604 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72752948 72753076 72752948 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72753233 72753301 72753233 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72753372 72753459 72753372 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72753720 72753820 72753720 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72754078 72754195 72754078 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72754382 72754441 72754382 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72754600 72754729 72754600 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 CDS 72756170 72756300 72756170 ID=MsG0780040074.01.T01:cds;Parent=MsG0780040074.01.T01
Chr7 mRNA 72749710 72756300 72749710 ID=MsG0780040074.01.T02;Parent=MsG0780040074.01;Name=MsG0780040074.01.T02;_AED=0.40;_eAED=0.42;_QI=95|0.84|0.85|1|0.92|0.85|14|0|480
Chr7 exon 72749710 72749922 72749710 ID=MsG0780040074.01.T02:exon:12926;Parent=MsG0780040074.01.T02
Chr7 five_prime_UTR 72749710 72749804 72749710 ID=MsG0780040074.01.T02:five_prime_utr;Parent=MsG0780040074.01.T02
Chr7 CDS 72749805 72749922 72749805 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72750812 72750906 72750812 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72750992 72751105 72750992 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72751809 72751913 72751809 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72752013 72752084 72752013 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72752604 72752716 72752604 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72752948 72753076 72752948 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72753233 72753301 72753233 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72753372 72753459 72753372 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72753720 72753820 72753720 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72754078 72754195 72754078 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72754382 72754441 72754382 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72754600 72754729 72754600 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Chr7 CDS 72756170 72756300 72756170 ID=MsG0780040074.01.T02:cds;Parent=MsG0780040074.01.T02
Gene Sequence

>MsG0780040074.01.T02

ATGGCACAAGAATCACAAGCAATGGATCCGCACAAGAATGAAGTTATTCGTTTAGAGCGTGAATCTGTTATTCCAATTCTCAAACCTAGACTCATCATGACATTGGCAAATCTTATTGAGCACAGTGCCGACCGAGCTGAGTTTTTGAAGCTCTCCAAGAGAGTAGAGTACACAATTCGAGCTTGGTACCTTCTACAATTTGAGGACTTGATGCAACTTTACTCCCTCTTTGATCCTGTAAGCGGGGCACATAAGTTGGAACAGCAGAACCTGGCTCCTGAAGAAATTGATGTACTTGAACAGAATTTCTTGACATACCTATTTCAGGTAATGGAAAAGAGCAACTTTAAGATAGTGACTGCGGATGAGATTGAGGTTGCACATTCAGGCCAGTATCTTCTAAATCTTCCCATTTCTGTTGATGAATCTAAGCTTGACAAGACACTTCTGAAGAAATATTTTGCAGAGCATCATCATGATAACCTTCCAGATTTCTCTGATAAGTATGTTATCTTTCGGCGTGGCATTGGGGTTGATCGAACAACTGATTACTTTATCATGGAGAAACTGGACATGCTCATTGGACGATTTTGGGCCTATTTGTTAAGAATAACTAGGTTAGAAAAGATTTTTTCAAGAAAGTCAAAGCATATTAAGAAGGATTCAGATGGCAATGAAATGATCCGTGATGCGACTGGGGATGACTTTGTTGTGGAACGGATACGTCTTGAAAATATGCAACTAAGCTCCCGTAATTTACTTGGCAAGACCTTGATCCAAGAACCGACATTTGATAGGATAATTGTTGTCTACAGGGGAGCCAGTACCAAATCTAAAGCAGAACGAGGAATATTTGTGAAGCATTTTAAGAACATTCCAATGGCTGATATGGAAATAGTTCTTGTTGCTGTATTTAGTTCACTCGAAATGCCTTCGGCTGATTGGTGGGTCATATTTGCTGTTCTTTCCACAGTAGTTGGTTATATTGTCAAGACATATTTCACGTTCCAACAAAACTTGGCTCAATACCAAAATTTGATTACACAGTCAATGTATGACAAACAACTGGACAGCGGAAAGGGTACACTTCTCCATTTGTGTGATGATGTCATTCAACAAGAAGTCAAAGAGGTGATACTTTCATTCTTTATTCTAATGGAACAGGGTAAAGCTACAAGACAGGATCTCGATCACTGGTGTGAGGAACTAATCAAAGAAGAGTTTGGGGAGGAATGCGATTTTGATGTGGATGATGCAGTGGGTAAATTAGAGAAATTGGGTATCGTCACTCGGGTGAGATTCTCTAAAACTTTGATTCATGTTGGAATTCAGGATTCGATTGGTCGATATCAATGTGTTGGGCTCAAAAGGGCAAATGAGATCATTGGCACCACCACTGAAGAGCTTGTGCTCAAAGCAAGACAGGGAAACCTTACTACTTGA

>MsG0780040074.01.T01

ATGGCACAAGAATCACAAGCAATGGATCCGCACAAGAATGAAGTTATTCGTTTAGAGCGTGAATCTGTTATTCCAATTCTCAAACCTAGACTCATCATGACATTGGCAAATCTTATTGAGCACAGTGCCGACCGAGCTGAGTTTTTGAAGCTCTCCAAGAGAGTAGAGTACACAATTCGAGCTTGGTACCTTCTACAATTTGAGGACTTGATGCAACTTTACTCCCTCTTTGATCCTGTAAGCGGGGCACATAAGTTGGAACAGCAGAACCTGGCTCCTGAAGAAATTGATGTACTTGAACAGAATTTCTTGACATACCTATTTCAGGTAATGGAAAAGAGCAACTTTAAGATAGTGACTGCGGATGAGATTGAGGTTGCACATTCAGGCCAGTATCTTCTAAATCTTCCCATTTCTGTTGATGAATCTAAGCTTGACAAGACACTTCTGAAGAAATATTTTGCAGAGCATCATCATGATAACCTTCCAGATTTCTCTGATAAGTATGTTATCTTTCGGCGTGGCATTGGGGTTGATCGAACAACTGATTACTTTATCATGGAGAAACTGGACATGCTCATTGGACGATTTTGGGCCTATTTGTTAAGAATAACTAGGTTAGAAAAGATTTTTTCAAGAAAGTCAAAGCATATTAAGAAGGATTCAGATGGCAATGAAATGATCCGTGATGCGACTGGGGATGACTTTGTTGTGGAACGGATACGTCTTGAAAATATGCAACTAAGCTCCCGTAATTTACTTGGCAAGACCTTGATCCAAGAACCGACATTTGATAGGATAATTGTTGTCTACAGGGGAGCCAGTACCAAATCTAAAGCAGAACGAGGAATATTTGTGAAGCATTTTAAGAACATTCCAATGGCTGATATGGAAATAGTTCTTGTTGCTGTATTTAGTTCACTCGAAATGCCTTCGGCTGATTGGTGGGTCATATTTGCTGTTCTTTCCACAGTAGTTGGTTATATTGTCAAGACATATTTCACGTTCCAACAAAACTTGGCTCAATACCAAAATTTGATTACACAGTCAATGTATGACAAACAACTGGACAGCGGAAAGGGTACACTTCTCCATTTGTGTGATGATGTCATTCAACAAGAAGTCAAAGAGGTGATACTTTCATTCTTTATTCTAATGGAACAGGGTAAAGCTACAAGACAGGATCTCGATCACTGGTGTGAGGAACTAATCAAAGAAGAGTTTGGGGAGGAATGCGATTTTGATGTGGATGATGCAGTGGGTAAATTAGAGAAATTGGGTATCGTCACTCGGGTGAGATTCTCTAAAACTTTGATTCATGTTGGAATTCAGGATTCGATTGGTCGATATCAATGTGTTGGGCTCAAAAGGGCAAATGAGATCATTGGCACCACCACTGAAGAGCTTGTGCTCAAAGCAAGACAGGGAAACCTTACTACTTGA

Protein sequence

>MsG0780040074.01.T02

MAQESQAMDPHKNEVIRLERESVIPILKPRLIMTLANLIEHSADRAEFLKLSKRVEYTIRAWYLLQFEDLMQLYSLFDPVSGAHKLEQQNLAPEEIDVLEQNFLTYLFQVMEKSNFKIVTADEIEVAHSGQYLLNLPISVDESKLDKTLLKKYFAEHHHDNLPDFSDKYVIFRRGIGVDRTTDYFIMEKLDMLIGRFWAYLLRITRLEKIFSRKSKHIKKDSDGNEMIRDATGDDFVVERIRLENMQLSSRNLLGKTLIQEPTFDRIIVVYRGASTKSKAERGIFVKHFKNIPMADMEIVLVAVFSSLEMPSADWWVIFAVLSTVVGYIVKTYFTFQQNLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVILSFFILMEQGKATRQDLDHWCEELIKEEFGEECDFDVDDAVGKLEKLGIVTRVRFSKTLIHVGIQDSIGRYQCVGLKRANEIIGTTTEELVLKARQGNLTT*

>MsG0780040074.01.T01

MAQESQAMDPHKNEVIRLERESVIPILKPRLIMTLANLIEHSADRAEFLKLSKRVEYTIRAWYLLQFEDLMQLYSLFDPVSGAHKLEQQNLAPEEIDVLEQNFLTYLFQVMEKSNFKIVTADEIEVAHSGQYLLNLPISVDESKLDKTLLKKYFAEHHHDNLPDFSDKYVIFRRGIGVDRTTDYFIMEKLDMLIGRFWAYLLRITRLEKIFSRKSKHIKKDSDGNEMIRDATGDDFVVERIRLENMQLSSRNLLGKTLIQEPTFDRIIVVYRGASTKSKAERGIFVKHFKNIPMADMEIVLVAVFSSLEMPSADWWVIFAVLSTVVGYIVKTYFTFQQNLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVILSFFILMEQGKATRQDLDHWCEELIKEEFGEECDFDVDDAVGKLEKLGIVTRVRFSKTLIHVGIQDSIGRYQCVGLKRANEIIGTTTEELVLKARQGNLTT*