AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044035.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044035.01.T01 MTR_3g007700 99.394 165 1 0 126 290 18 182 1.67e-118 338
MsG0880044035.01.T01 MTR_4g080740 99.394 165 1 0 126 290 17 181 2.59e-118 337
MsG0880044035.01.T01 MTR_8g046140 98.788 165 2 0 126 290 17 181 8.72e-118 336
MsG0880044035.01.T01 MTR_3g007690 69.697 198 47 2 105 289 44 241 2.44e-91 271
MsG0880044035.01.T01 MTR_7g033205 78.182 110 24 0 1 110 33 142 1.52e-56 179
MsG0880044035.01.T01 MTR_2g061390 73.874 111 28 1 1 110 42 152 2.44e-53 172
MsG0880044035.01.T01 MTR_8g027132 70.968 93 27 0 13 105 5 97 8.66e-41 139
MsG0880044035.01.T01 MTR_4g098825 58.182 110 20 1 1 110 17 100 5.51e-33 117
MsG0880044035.01.T01 MTR_2g039980 69.767 86 26 0 25 110 44 129 6.45e-33 118
MsG0880044035.01.T01 MTR_3g030100 67.089 79 26 0 25 103 12 90 2.39e-30 110
MsG0880044035.01.T01 MTR_4g028260 63.855 83 29 1 22 104 77 158 3.75e-28 106
MsG0880044035.01.T01 MTR_5g064800 69.620 79 23 1 30 107 292 370 1.85e-26 107
MsG0880044035.01.T01 MTR_8g051775 73.529 68 18 0 43 110 128 195 2.65e-26 104
MsG0880044035.01.T01 MTR_3g449470 39.474 114 59 3 5 110 53 164 2.18e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044035.01.T01 AT2G42740 95.758 165 7 0 126 290 17 181 1.43e-114 328
MsG0880044035.01.T01 AT5G45775 95.152 165 8 0 126 290 17 181 6.63e-114 326
MsG0880044035.01.T01 AT4G18730 95.152 165 8 0 126 290 17 181 6.63e-114 326
MsG0880044035.01.T01 AT3G58700 95.152 165 8 0 126 290 17 181 6.63e-114 326
MsG0880044035.01.T01 AT5G45775 95.732 164 7 0 126 289 7 170 1.38e-113 325

Find 64 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCTTCAACTGGCATTTA+TGG 0.115122 8:-34615765 MsG0880044035.01.T01:CDS
TTTAGTGATACTGGTTGTTT+TGG 0.242495 8:-34616285 MsG0880044035.01.T01:CDS
CGATACACTGTCCGTTCTTT+TGG 0.247965 8:-34616420 MsG0880044035.01.T01:CDS
CGACAAGGCAATGCAGCTTT+TGG 0.255810 8:-34616352 MsG0880044035.01.T01:CDS
GCTTGCTATGTGACTGTTAG+AGG 0.285727 8:-34616375 MsG0880044035.01.T01:CDS
AGATATTATACTTCATGTTT+TGG 0.286187 8:-34620985 MsG0880044035.01.T01:CDS
ACATCAGATATTGACAAAAT+TGG 0.294950 8:+34620813 None:intergenic
AATTCAGGAGCATATTGATT+TGG 0.303290 8:-34616256 MsG0880044035.01.T01:CDS
TAAAATTACCTTTGCAGCTC+TGG 0.312435 8:+34618479 None:intergenic
TGGCCCTGTGTTATGAAATA+TGG 0.328331 8:-34620965 MsG0880044035.01.T01:CDS
AGTTTATAGAAACCACTAAA+AGG 0.340076 8:+34620777 None:intergenic
ATTCAGGAGCATATTGATTT+GGG 0.346376 8:-34616255 MsG0880044035.01.T01:CDS
TTGTTGAGATAACAAAATAA+AGG 0.373551 8:+34615509 None:intergenic
TTGTTATCTCAACAATGAAT+TGG 0.389105 8:-34615501 MsG0880044035.01.T01:three_prime_UTR
AGGCGATTGTTTAGTTACTT+AGG 0.430278 8:-34615587 MsG0880044035.01.T01:exon
CTTTGGAAAACACTGGGGTT+GGG 0.432883 8:+34618361 None:intergenic
TTCGTTGTTCTGGAGCGTCC+TGG 0.441611 8:-34615732 MsG0880044035.01.T01:CDS
CTCAGGTATGATCCTTCAAC+TGG 0.444911 8:-34615774 MsG0880044035.01.T01:intron
GAGTGCTCATACGGTGTTGT+TGG 0.449359 8:-34620853 MsG0880044035.01.T01:CDS
TGAGATAACAAAATAAAGGT+TGG 0.453682 8:+34615513 None:intergenic
CTCGTTCTTAATATCTCTGT+TGG 0.461901 8:-34618522 MsG0880044035.01.T01:CDS
CCTTTGGAAAACACTGGGGT+TGG 0.462933 8:+34618360 None:intergenic
CGTCCTTTGTTACGCGATGT+TGG 0.468785 8:+34615664 None:intergenic
TGTCAATATCTGATGTTCAC+TGG 0.479694 8:-34620806 MsG0880044035.01.T01:CDS
ATTCCATAAATGCCAGTTGA+AGG 0.482057 8:+34615762 None:intergenic
AATATCTCTGTTGGTGAAAG+TGG 0.486734 8:-34618513 MsG0880044035.01.T01:CDS
TTCAACTGGCATTTATGGAA+TGG 0.497930 8:-34615760 MsG0880044035.01.T01:CDS
AATAAACCTTTGGAAAACAC+TGG 0.500470 8:+34618354 None:intergenic
GATGATGGTAAGTGGGGTAT+TGG 0.500670 8:-34620729 MsG0880044035.01.T01:CDS
GGAGAGCGGTTTGAAGGTGA+AGG 0.504094 8:-34616331 MsG0880044035.01.T01:CDS
TAAGTAACTAAACAATCGCC+TGG 0.515662 8:+34615589 None:intergenic
GGGACGTCGTCGTCGGTGCA+AGG 0.515936 8:-34615700 MsG0880044035.01.T01:CDS
TCACACCTTCATATTTCACT+TGG 0.516049 8:+34615625 None:intergenic
GCATCAAGTTCGACAGATGA+TGG 0.518578 8:-34620744 MsG0880044035.01.T01:CDS
CGACGTCCCACACGGTAACC+AGG 0.522429 8:+34615714 None:intergenic
CAATCGCCTGGGACTTGTTG+AGG 0.523910 8:+34615601 None:intergenic
ATAAACCTTTGGAAAACACT+GGG 0.526168 8:+34618355 None:intergenic
TTCGACAGATGATGGTAAGT+GGG 0.538079 8:-34620736 MsG0880044035.01.T01:CDS
CGTCGGTGCAAGGCTCGTGT+TGG 0.539971 8:-34615690 MsG0880044035.01.T01:CDS
TCTGACCTTGATATCCCTCA+TGG 0.541541 8:+34618547 None:intergenic
GTTCGACAGATGATGGTAAG+TGG 0.547285 8:-34620737 MsG0880044035.01.T01:CDS
GAGCGTCCTGGTTACCGTGT+GGG 0.553181 8:-34615720 MsG0880044035.01.T01:CDS
TGCTCATACGGTGTTGTTGG+AGG 0.563843 8:-34620850 MsG0880044035.01.T01:CDS
TTCTTCTAATACCAAAAGAA+CGG 0.565907 8:+34616409 None:intergenic
TAAGTGGGGTATTGGTGTTG+TGG 0.566091 8:-34620721 MsG0880044035.01.T01:CDS
ACCGTGTGGGACGTCGTCGT+CGG 0.567737 8:-34615707 MsG0880044035.01.T01:CDS
TCGTCTCACCAGAGCTGCAA+AGG 0.570040 8:-34618487 MsG0880044035.01.T01:intron
GAACACCATGAGGGATATCA+AGG 0.572580 8:-34618552 MsG0880044035.01.T01:CDS
TGGTTCCAAGTGAAATATGA+AGG 0.576763 8:-34615630 MsG0880044035.01.T01:CDS
TGTGATCCTCAACAAGTCCC+AGG 0.588999 8:-34615607 MsG0880044035.01.T01:CDS
AATCCAACATCGCGTAACAA+AGG 0.595227 8:-34615667 MsG0880044035.01.T01:CDS
GTGTTGTTGGAGGCACTAAG+TGG 0.612730 8:-34620840 MsG0880044035.01.T01:CDS
CACACCATATTTCATAACAC+AGG 0.619457 8:+34620961 None:intergenic
CAAAGGACGATGCTATGAAG+TGG 0.633896 8:-34615650 MsG0880044035.01.T01:CDS
AAGTAACTAAACAATCGCCT+GGG 0.633971 8:+34615590 None:intergenic
GGAGCGTCCTGGTTACCGTG+TGG 0.638331 8:-34615721 MsG0880044035.01.T01:CDS
ACACCATATTTCATAACACA+GGG 0.638637 8:+34620962 None:intergenic
AGAAACTCTCGAACACCATG+AGG 0.653183 8:-34618562 MsG0880044035.01.T01:CDS
ACCGACGACGACGTCCCACA+CGG 0.654712 8:+34615706 None:intergenic
TGTGACTGTTAGAGGCGACA+AGG 0.664589 8:-34616367 MsG0880044035.01.T01:CDS
TCGACAGATGATGGTAAGTG+GGG 0.683027 8:-34620735 MsG0880044035.01.T01:CDS
GAAACTCTCGAACACCATGA+GGG 0.686507 8:-34618561 MsG0880044035.01.T01:CDS
TAAACCTTTGGAAAACACTG+GGG 0.705871 8:+34618356 None:intergenic
CAGGTGTTGGAACAACTCAG+TGG 0.734121 8:-34618384 MsG0880044035.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTAAAATAATAAAAAAAT+TGG + Chr8:34619770-34619789 None:intergenic 10.0%
!! ATTATTAATATGAAAGATTA+TGG + Chr8:34616849-34616868 None:intergenic 10.0%
!!! CATTTTTTTAGTTATATTTT+TGG + Chr8:34617436-34617455 None:intergenic 10.0%
!!! TAATGTATTTTTTTTTTTGA+AGG + Chr8:34617056-34617075 None:intergenic 10.0%
!! AAGAAATTAAAATCATAAAG+CGG + Chr8:34617134-34617153 None:intergenic 15.0%
!! AATTATCTTTAACGTAAAAA+AGG - Chr8:34616126-34616145 MsG0880044035.01.T01:intron 15.0%
!! AATTTAGAAAACAAATGTTA+AGG + Chr8:34619256-34619275 None:intergenic 15.0%
!! ACTAAAAAAATGAAATACAA+AGG - Chr8:34617555-34617574 MsG0880044035.01.T01:intron 15.0%
!! ACTATTAAAATCACAAAAAA+AGG - Chr8:34618317-34618336 MsG0880044035.01.T01:intron 15.0%
!! ATATTTATAATCATCAACAT+CGG + Chr8:34618905-34618924 None:intergenic 15.0%
!! ATTATCTTTAACGTAAAAAA+GGG - Chr8:34616127-34616146 MsG0880044035.01.T01:intron 15.0%
!! CAAAATTAAAAATAAACCTT+TGG + Chr8:34618076-34618095 None:intergenic 15.0%
!! CTAAAAAAATGAAATACAAA+GGG - Chr8:34617556-34617575 MsG0880044035.01.T01:intron 15.0%
!! GTAAATTAAAAAACAAAACT+TGG + Chr8:34617460-34617479 None:intergenic 15.0%
!! TAAAAAAATGAAATACAAAG+GGG - Chr8:34617557-34617576 MsG0880044035.01.T01:intron 15.0%
!! TAATAAAAAAATTGGTGTAT+AGG + Chr8:34619762-34619781 None:intergenic 15.0%
!! TACAAAAAATCATAATGATT+CGG - Chr8:34620983-34621002 MsG0880044035.01.T01:CDS 15.0%
!! TCAAGACAAAAATAAAAATT+GGG + Chr8:34618750-34618769 None:intergenic 15.0%
!! TTCAAGACAAAAATAAAAAT+TGG + Chr8:34618751-34618770 None:intergenic 15.0%
!!! AAAATTTGAAATTATGTCTT+TGG - Chr8:34620514-34620533 MsG0880044035.01.T01:intron 15.0%
!!! AAGATTGTTGATAAAAATTA+AGG - Chr8:34618510-34618529 MsG0880044035.01.T01:CDS 15.0%
!!! AGATTGTTGATAAAAATTAA+GGG - Chr8:34618511-34618530 MsG0880044035.01.T01:CDS 15.0%
!!! ATCTAATAGATATGAAATTT+TGG + Chr8:34619928-34619947 None:intergenic 15.0%
!!! ATTTCATTTTTTGTATTATC+AGG - Chr8:34618014-34618033 MsG0880044035.01.T01:intron 15.0%
!!! CTAATGATTTTAATAGTTTA+GGG - Chr8:34618425-34618444 MsG0880044035.01.T01:intron 15.0%
!!! TATGATTGTTTATAAGTTTT+AGG - Chr8:34619502-34619521 MsG0880044035.01.T01:intron 15.0%
!!! TATTATTTTACCTTGAAAAT+TGG - Chr8:34619777-34619796 MsG0880044035.01.T01:intron 15.0%
!!! TATTTTATTTTCTCTTGTTT+TGG - Chr8:34621013-34621032 MsG0880044035.01.T01:CDS 15.0%
!!! TATTTTTGTCTTGAAAAAAA+TGG - Chr8:34618756-34618775 MsG0880044035.01.T01:intron 15.0%
!!! TCAAAGTTTTACATAATTTT+AGG - Chr8:34620412-34620431 MsG0880044035.01.T01:intron 15.0%
!!! TTATCCTTTTAATTCTTTAT+AGG - Chr8:34616612-34616631 MsG0880044035.01.T01:intron 15.0%
!!! TTTCTTCTTATGATTTTTTT+TGG - Chr8:34617148-34617167 MsG0880044035.01.T01:intron 15.0%
!! AAACTATTAAAATCATTAGG+AGG + Chr8:34618424-34618443 None:intergenic 20.0%
!! AACATAAATGATAACAAACT+TGG + Chr8:34620610-34620629 None:intergenic 20.0%
!! ACTAAGACTACAAAAATATA+AGG + Chr8:34616075-34616094 None:intergenic 20.0%
!! AGGTTCTTAAAAAAAAATCT+CGG - Chr8:34616652-34616671 MsG0880044035.01.T01:intron 20.0%
!! ATTCATTATATGTTTCGAAT+TGG - Chr8:34617357-34617376 MsG0880044035.01.T01:intron 20.0%
!! CCTAAACTATTAAAATCATT+AGG + Chr8:34618427-34618446 None:intergenic 20.0%
!! TAATGTATTAGAACATTGTT+TGG + Chr8:34617013-34617032 None:intergenic 20.0%
!! TAATGTTAATGATGATAGAA+TGG - Chr8:34619724-34619743 MsG0880044035.01.T01:intron 20.0%
!! TATTCAATATACAATCAACT+AGG + Chr8:34618248-34618267 None:intergenic 20.0%
!! TGATTTGAATGAGAATAAAA+AGG - Chr8:34619088-34619107 MsG0880044035.01.T01:intron 20.0%
!! TTAGCCTATAAAGAATTAAA+AGG + Chr8:34616619-34616638 None:intergenic 20.0%
!! TTGTTGAGATAACAAAATAA+AGG + Chr8:34620911-34620930 None:intergenic 20.0%
!! TTTATAATGTAGATTGCATA+CGG - Chr8:34616034-34616053 MsG0880044035.01.T01:intron 20.0%
!!! AAATTTTTTATTTTGGGTCA+AGG + Chr8:34617096-34617115 None:intergenic 20.0%
!!! AATGTCAACTAGTTTATAAA+TGG + Chr8:34616187-34616206 None:intergenic 20.0%
!!! AGAAATAAGAAATGTTTTGA+GGG - Chr8:34615481-34615500 MsG0880044035.01.T01:three_prime_UTR 20.0%
!!! AGATATTATACTTCATGTTT+TGG - Chr8:34615432-34615451 MsG0880044035.01.T01:three_prime_UTR 20.0%
!!! ATCACACATTTTATTATTTG+AGG + Chr8:34618808-34618827 None:intergenic 20.0%
!!! ATGGCGTAAATTTTTTATTT+TGG + Chr8:34617103-34617122 None:intergenic 20.0%
!!! ATGTCAACTAGTTTATAAAT+GGG + Chr8:34616186-34616205 None:intergenic 20.0%
!!! CCTAATGATTTTAATAGTTT+AGG - Chr8:34618424-34618443 MsG0880044035.01.T01:intron 20.0%
!!! GTTTTACATAATTTTAGGAT+AGG - Chr8:34620417-34620436 MsG0880044035.01.T01:intron 20.0%
!!! TAATCATTTAGTTCTACAAA+AGG - Chr8:34620318-34620337 MsG0880044035.01.T01:intron 20.0%
!!! TAGAAATAAGAAATGTTTTG+AGG - Chr8:34615480-34615499 MsG0880044035.01.T01:three_prime_UTR 20.0%
!!! TGATTGTGTTTTTACTAAAA+AGG - Chr8:34618995-34619014 MsG0880044035.01.T01:intron 20.0%
!!! TGGCGTAAATTTTTTATTTT+GGG + Chr8:34617102-34617121 None:intergenic 20.0%
!!! TTCTTCTGGTATTTAATTTA+GGG + Chr8:34619184-34619203 None:intergenic 20.0%
! AAAACAACCAAAAACTTTCA+AGG + Chr8:34619210-34619229 None:intergenic 25.0%
! AAACTATGGTTTAAGCTATT+AGG - Chr8:34620386-34620405 MsG0880044035.01.T01:intron 25.0%
! AAGAAGCAATCAAATATGTT+TGG + Chr8:34616211-34616230 None:intergenic 25.0%
! AAGACTACAAAAATATAAGG+TGG + Chr8:34616072-34616091 None:intergenic 25.0%
! ACATCAGATATTGACAAAAT+TGG + Chr8:34615607-34615626 None:intergenic 25.0%
! ACATGCAACAAATTTAAACT+AGG + Chr8:34615967-34615986 None:intergenic 25.0%
! AGAAGCAATCAAATATGTTT+GGG + Chr8:34616210-34616229 None:intergenic 25.0%
! AGTTTATAGAAACCACTAAA+AGG + Chr8:34615643-34615662 None:intergenic 25.0%
! ATAAATGATAACAAACTTGG+TGG + Chr8:34620607-34620626 None:intergenic 25.0%
! ATTTCATATCTATTAGATGC+TGG - Chr8:34619930-34619949 MsG0880044035.01.T01:intron 25.0%
! GAATGAGAATAAAAAGGAAA+GGG - Chr8:34619094-34619113 MsG0880044035.01.T01:intron 25.0%
! GATGGAATATCATTAGAAAT+CGG + Chr8:34620583-34620602 None:intergenic 25.0%
! TAAATAATGAGCAATTTGGT+TGG + Chr8:34616001-34616020 None:intergenic 25.0%
! TAGCTAAATAATGAGCAATT+TGG + Chr8:34616005-34616024 None:intergenic 25.0%
! TATTAGAACATTGTTTGGAA+CGG + Chr8:34617008-34617027 None:intergenic 25.0%
! TCATAAAGCGGTAAAAAAAA+TGG + Chr8:34617122-34617141 None:intergenic 25.0%
! TCTTAAAAAAAAATCTCGGT+AGG - Chr8:34616656-34616675 MsG0880044035.01.T01:intron 25.0%
! TGAAATGATAAAACACTCAA+AGG + Chr8:34620543-34620562 None:intergenic 25.0%
! TGAATGAGAATAAAAAGGAA+AGG - Chr8:34619093-34619112 MsG0880044035.01.T01:intron 25.0%
! TGAGATAACAAAATAAAGGT+TGG + Chr8:34620907-34620926 None:intergenic 25.0%
! TGGTTTGATAGACTTAATTT+AGG + Chr8:34616809-34616828 None:intergenic 25.0%
! TGTGTGTATATATATGTTTG+TGG - Chr8:34616945-34616964 MsG0880044035.01.T01:intron 25.0%
! TTCTTCTAATACCAAAAGAA+CGG + Chr8:34620011-34620030 None:intergenic 25.0%
! TTCTTCTGGTATTTACATTT+AGG + Chr8:34618600-34618619 None:intergenic 25.0%
! TTGGAATGCATAAATGTAAA+TGG - Chr8:34617376-34617395 MsG0880044035.01.T01:intron 25.0%
! TTGTTATCTCAACAATGAAT+TGG - Chr8:34620916-34620935 MsG0880044035.01.T01:CDS 25.0%
! TTTCATATCTATTAGATGCT+GGG - Chr8:34619931-34619950 MsG0880044035.01.T01:intron 25.0%
!! AAAACAACCAAAAGTTTTCA+AGG + Chr8:34619658-34619677 None:intergenic 25.0%
!! AGAAAATCCTTGAAAACTTT+TGG - Chr8:34619648-34619667 MsG0880044035.01.T01:intron 25.0%
!! CTTCTTCTGGTATTTAATTT+AGG + Chr8:34619185-34619204 None:intergenic 25.0%
!! GTTAAATTGCATTGATAGAA+AGG - Chr8:34618688-34618707 MsG0880044035.01.T01:intron 25.0%
!! TGCTAAATAATCAAGTTTTC+TGG - Chr8:34619366-34619385 MsG0880044035.01.T01:intron 25.0%
!! TTCTTCTGGTATTTTCATTT+AGG + Chr8:34619632-34619651 None:intergenic 25.0%
!!! AGAAGAAATTTTAGTGATAC+TGG - Chr8:34620123-34620142 MsG0880044035.01.T01:intron 25.0%
!!! CTGTTGACTCAATTATAAAA+TGG + Chr8:34619122-34619141 None:intergenic 25.0%
!!! GAAATAAGAAATGTTTTGAG+GGG - Chr8:34615482-34615501 MsG0880044035.01.T01:three_prime_UTR 25.0%
!!! TTTTCGAGTCACAATAATTT+GGG - Chr8:34619674-34619693 MsG0880044035.01.T01:intron 25.0%
!!! TTTTTTGTATTATCAGGTGT+TGG - Chr8:34618020-34618039 MsG0880044035.01.T01:intron 25.0%
!!! TTTTTTTTTTTGCTGCACAA+AGG - Chr8:34618937-34618956 MsG0880044035.01.T01:intron 25.0%
AAAAAAAATCTCGGTAGGTT+TGG - Chr8:34616661-34616680 MsG0880044035.01.T01:intron 30.0%
AACTTGATTATTTAGCATGC+AGG + Chr8:34619363-34619382 None:intergenic 30.0%
AAGAACAACAATCAGTTAAC+TGG + Chr8:34619957-34619976 None:intergenic 30.0%
AATGGTTGAAAACGATAGAA+TGG - Chr8:34618774-34618793 MsG0880044035.01.T01:intron 30.0%
AATTTCTTAAGACGTTGAGA+AGG - Chr8:34616768-34616787 MsG0880044035.01.T01:intron 30.0%
ACACCATATTTCATAACACA+GGG + Chr8:34615458-34615477 None:intergenic 30.0%
ACTCAAAACATGTGACATTT+AGG + Chr8:34619312-34619331 None:intergenic 30.0%
AGAAGAGGAAAATAAAAGCA+AGG + Chr8:34619431-34619450 None:intergenic 30.0%
AGTTCTACAAAAGGAAACTA+TGG - Chr8:34620372-34620391 MsG0880044035.01.T01:intron 30.0%
ATTATAATTGAGTCACAGCA+GGG - Chr8:34619572-34619591 MsG0880044035.01.T01:intron 30.0%
CAAAAGACTTCAAAATAGCA+GGG - Chr8:34617480-34617499 MsG0880044035.01.T01:intron 30.0%
GAAAACAACCAAAACTTTCA+AGG + Chr8:34618626-34618645 None:intergenic 30.0%
GAAAGAACGAGATTTAATAC+TGG + Chr8:34617631-34617650 None:intergenic 30.0%
TAATAGTTTAGGGACTAAAC+TGG - Chr8:34618435-34618454 MsG0880044035.01.T01:intron 30.0%
TATATAATGAGTCAACAGCA+GGG - Chr8:34618540-34618559 MsG0880044035.01.T01:CDS 30.0%
TATTATAATTGAGTCACAGC+AGG - Chr8:34619571-34619590 MsG0880044035.01.T01:intron 30.0%
TTAACGAGAATTGAACTCAA+GGG - Chr8:34619545-34619564 MsG0880044035.01.T01:intron 30.0%
TTATAATTGAGTCAACAGCA+GGG - Chr8:34619124-34619143 MsG0880044035.01.T01:intron 30.0%
TTATATAATGAGTCAACAGC+AGG - Chr8:34618539-34618558 MsG0880044035.01.T01:CDS 30.0%
TTCAATAATAGAGTCGACAT+AGG + Chr8:34615917-34615936 None:intergenic 30.0%
TTTAACGAGAATTGAACTCA+AGG - Chr8:34619544-34619563 MsG0880044035.01.T01:intron 30.0%
TTTATAATTGAGTCAACAGC+AGG - Chr8:34619123-34619142 MsG0880044035.01.T01:intron 30.0%
! AAATGCTTTGAATGTGATCT+TGG - Chr8:34615864-34615883 MsG0880044035.01.T01:intron 30.0%
! AAGAAGATCCTTGAAAGTTT+TGG - Chr8:34618615-34618634 MsG0880044035.01.T01:intron 30.0%
! AATAAACCTTTGGAAAACAC+TGG + Chr8:34618066-34618085 None:intergenic 30.0%
! AATTCAGGAGCATATTGATT+TGG - Chr8:34620161-34620180 MsG0880044035.01.T01:intron 30.0%
! AGAAGATCCTTGAAAGTTTT+TGG - Chr8:34618616-34618635 MsG0880044035.01.T01:intron 30.0%
! ATAAACCTTTGGAAAACACT+GGG + Chr8:34618065-34618084 None:intergenic 30.0%
! ATGCATTTTCTTACAGGTTT+CGG - Chr8:34617829-34617848 MsG0880044035.01.T01:intron 30.0%
! CGAAAAATGCATTTTCTTAC+AGG - Chr8:34617823-34617842 MsG0880044035.01.T01:intron 30.0%
! CTAAAAAGTTTGAAGCATGA+AGG + Chr8:34616260-34616279 None:intergenic 30.0%
! TCCTTCAATTTGGTTTACTT+CGG - Chr8:34618360-34618379 MsG0880044035.01.T01:intron 30.0%
! TGTTAACATTGTTTCTTCTC+AGG - Chr8:34620626-34620645 MsG0880044035.01.T01:intron 30.0%
! TTTCGAGTCACAATAATTTG+GGG - Chr8:34619675-34619694 MsG0880044035.01.T01:intron 30.0%
!! AAGTGGATCAGTTTTTGATT+AGG + Chr8:34617243-34617262 None:intergenic 30.0%
!! AGTTTTCAAGGATTTTCTTC+TGG + Chr8:34619646-34619665 None:intergenic 30.0%
!! ATTCAGGAGCATATTGATTT+GGG - Chr8:34620162-34620181 MsG0880044035.01.T01:intron 30.0%
!! CGATTGTTTTGTATATCAGT+AGG - Chr8:34619020-34619039 MsG0880044035.01.T01:intron 30.0%
!! GTTTTCAAGACACAATTATC+TGG - Chr8:34618640-34618659 MsG0880044035.01.T01:intron 30.0%
!! TGTTTTCAAGACACAATATC+TGG - Chr8:34619224-34619243 MsG0880044035.01.T01:intron 30.0%
!! TTTAGTGATACTGGTTGTTT+TGG - Chr8:34620132-34620151 MsG0880044035.01.T01:intron 30.0%
!!! GAATTTTAAGAGTGCTCATA+CGG - Chr8:34615555-34615574 MsG0880044035.01.T01:three_prime_UTR 30.0%
!!! GTTTTCGAGTCACAATAATT+TGG - Chr8:34619673-34619692 MsG0880044035.01.T01:intron 30.0%
AACGAGATTTAATACTGGAG+AGG + Chr8:34617626-34617645 None:intergenic 35.0%
AACTTTCAAGGATCTTCTTC+TGG + Chr8:34618614-34618633 None:intergenic 35.0%
AAGTAACTAAACAATCGCCT+GGG + Chr8:34620830-34620849 None:intergenic 35.0%
AATAATAGAGTCGACATAGG+TGG + Chr8:34615914-34615933 None:intergenic 35.0%
AATGTCACACAAGTATTTCC+CGG - Chr8:34616506-34616525 MsG0880044035.01.T01:intron 35.0%
ACACTGTACGTGAATATTAC+AGG - Chr8:34619471-34619490 MsG0880044035.01.T01:intron 35.0%
AGCAAATCTTCTTTCATCCT+AGG + Chr8:34617190-34617209 None:intergenic 35.0%
AGGCGATTGTTTAGTTACTT+AGG - Chr8:34620830-34620849 MsG0880044035.01.T01:CDS 35.0%
AGGCTAAGAAAAATCTCAGT+AGG - Chr8:34616632-34616651 MsG0880044035.01.T01:intron 35.0%
ATATAATGAGTCAACAGCAG+GGG - Chr8:34618541-34618560 MsG0880044035.01.T01:CDS 35.0%
ATTAAATCTGGGTCACACAT+TGG + Chr8:34616472-34616491 None:intergenic 35.0%
ATTCCATAAATGCCAGTTGA+AGG + Chr8:34620658-34620677 None:intergenic 35.0%
ATTTAATACTGGAGAGGAGA+AGG + Chr8:34617620-34617639 None:intergenic 35.0%
ATTTACATTTAGGCTCCAAG+CGG + Chr8:34618590-34618609 None:intergenic 35.0%
CACACCATATTTCATAACAC+AGG + Chr8:34615459-34615478 None:intergenic 35.0%
CCAAAAGACTTCAAAATAGC+AGG - Chr8:34617479-34617498 MsG0880044035.01.T01:intron 35.0%
CTAATTGAAGTTCGATCATG+AGG - Chr8:34617208-34617227 MsG0880044035.01.T01:intron 35.0%
CTCGTTCTTAATATCTCTGT+TGG - Chr8:34617895-34617914 MsG0880044035.01.T01:intron 35.0%
CTTGTGTGACATTAATGTCA+CGG + Chr8:34616499-34616518 None:intergenic 35.0%
GAAATCAATCCCAGATTCTT+AGG - Chr8:34617264-34617283 MsG0880044035.01.T01:intron 35.0%
GAAGACAACAACAACAACAA+AGG + Chr8:34617798-34617817 None:intergenic 35.0%
GCTGTCAATAAGAAAAGAAG+AGG + Chr8:34619446-34619465 None:intergenic 35.0%
GGAACGAAAATCAGAAAGAA+TGG + Chr8:34617777-34617796 None:intergenic 35.0%
GTGTGATCCATGTTTAATAG+TGG - Chr8:34618821-34618840 MsG0880044035.01.T01:intron 35.0%
GTGTTTATCACAATGCATGT+TGG - Chr8:34620439-34620458 MsG0880044035.01.T01:intron 35.0%
TAAAATTACCTTTGCAGCTC+TGG + Chr8:34617941-34617960 None:intergenic 35.0%
TAAGTAACTAAACAATCGCC+TGG + Chr8:34620831-34620850 None:intergenic 35.0%
TATAATTGAGTCAACAGCAG+GGG - Chr8:34619125-34619144 MsG0880044035.01.T01:intron 35.0%
TCACACCTTCATATTTCACT+TGG + Chr8:34620795-34620814 None:intergenic 35.0%
TCCGAAGTAAACCAAATTGA+AGG + Chr8:34618364-34618383 None:intergenic 35.0%
TGAAAATTGGTCGAAGATGA+TGG - Chr8:34619790-34619809 MsG0880044035.01.T01:intron 35.0%
TGGTTCCAAGTGAAATATGA+AGG - Chr8:34620787-34620806 MsG0880044035.01.T01:CDS 35.0%
TGTCAATATCTGATGTTCAC+TGG - Chr8:34615611-34615630 MsG0880044035.01.T01:CDS 35.0%
TTAAATCTGGGTCACACATT+GGG + Chr8:34616471-34616490 None:intergenic 35.0%
TTATAATTGAGTCACAGCAG+GGG - Chr8:34619573-34619592 MsG0880044035.01.T01:intron 35.0%
TTCAACTGGCATTTATGGAA+TGG - Chr8:34620657-34620676 MsG0880044035.01.T01:intron 35.0%
TTGTTTAAACCAGTTTCGCA+TGG + Chr8:34620256-34620275 None:intergenic 35.0%
! AAAAGAAAGCGTACCATTTG+GGG + Chr8:34617754-34617773 None:intergenic 35.0%
! AATATCTCTGTTGGTGAAAG+TGG - Chr8:34617904-34617923 MsG0880044035.01.T01:intron 35.0%
! AGAAGCTTTAGCTATGTGAA+AGG - Chr8:34615792-34615811 MsG0880044035.01.T01:intron 35.0%
! ATCTGGGATTGATTTCTAAG+TGG + Chr8:34617260-34617279 None:intergenic 35.0%
! ATTTAATTTAGGGCTCCAAG+CGG + Chr8:34619174-34619193 None:intergenic 35.0%
! ATTTTCATTTAGGCTCCAAG+CGG + Chr8:34619622-34619641 None:intergenic 35.0%
! CTTTTCTTTATCAGACTCAG+AGG - Chr8:34615765-34615784 MsG0880044035.01.T01:CDS 35.0%
! GAAAAGAAAGCGTACCATTT+GGG + Chr8:34617755-34617774 None:intergenic 35.0%
! GAAGCTTTAGCTATGTGAAA+GGG - Chr8:34615793-34615812 MsG0880044035.01.T01:intron 35.0%
! TAAACCTTTGGAAAACACTG+GGG + Chr8:34618064-34618083 None:intergenic 35.0%
! TCAAGGGTATAGTGATTTAC+CGG + Chr8:34616528-34616547 None:intergenic 35.0%
! TCAATTTGGTTTACTTCGGA+GGG - Chr8:34618364-34618383 MsG0880044035.01.T01:CDS 35.0%
! TCATCTTCGACCAATTTTCA+AGG + Chr8:34619790-34619809 None:intergenic 35.0%
! TTCAATTTGGTTTACTTCGG+AGG - Chr8:34618363-34618382 MsG0880044035.01.T01:CDS 35.0%
!!! AATGGACTTTTTCGTTGTTC+TGG - Chr8:34620675-34620694 MsG0880044035.01.T01:intron 35.0%
!!! AGGATGAGACGTACATTTTT+TGG + Chr8:34618344-34618363 None:intergenic 35.0%
!!! CCTGCTATTTTGAAGTCTTT+TGG + Chr8:34617482-34617501 None:intergenic 35.0%
!!! GATACTGGTTGTTTTGGATT+CGG - Chr8:34620138-34620157 MsG0880044035.01.T01:intron 35.0%
!!! TTGTTTTGGATTCGGAATTC+AGG - Chr8:34620146-34620165 MsG0880044035.01.T01:intron 35.0%
!!! TTTTTTTGGCATTAACCCTC+TGG - Chr8:34617162-34617181 MsG0880044035.01.T01:intron 35.0%
AAACAACAACTCACCTCCAT+AGG + Chr8:34616552-34616571 None:intergenic 40.0%
AATCCAACATCGCGTAACAA+AGG - Chr8:34620750-34620769 MsG0880044035.01.T01:CDS 40.0%
AATGGGTGGATGCACATTTA+AGG - Chr8:34618396-34618415 MsG0880044035.01.T01:intron 40.0%
AATGTGTGGTCCAGATACAA+TGG + Chr8:34616405-34616424 None:intergenic 40.0%
ACGAATCGTTCCTAAGAATC+TGG + Chr8:34617277-34617296 None:intergenic 40.0%
AGCTAGTGGAAGGAACATAT+TGG + Chr8:34616320-34616339 None:intergenic 40.0%
AGCTTACTATGTTGTGCACT+AGG - Chr8:34616336-34616355 MsG0880044035.01.T01:CDS 40.0%
ATGGGTGGATGCACATTTAA+GGG - Chr8:34618397-34618416 MsG0880044035.01.T01:intron 40.0%
ATTGTCATTGCCATTGCATC+TGG - Chr8:34616422-34616441 MsG0880044035.01.T01:CDS 40.0%
CAACATAGTAAGCTAGTGGA+AGG + Chr8:34616330-34616349 None:intergenic 40.0%
CAAGCAGCCACTATTAAACA+TGG + Chr8:34618831-34618850 None:intergenic 40.0%
CGAATCGTTCCTAAGAATCT+GGG + Chr8:34617276-34617295 None:intergenic 40.0%
CTATTTCAGCACAAAACACG+TGG + Chr8:34619854-34619873 None:intergenic 40.0%
CTTACTATGTTGTGCACTAG+GGG - Chr8:34616338-34616357 MsG0880044035.01.T01:CDS 40.0%
GATCCTTCAACTGGCATTTA+TGG - Chr8:34620652-34620671 MsG0880044035.01.T01:intron 40.0%
GCTAGTGGAAGGAACATATT+GGG + Chr8:34616319-34616338 None:intergenic 40.0%
GCTTACTATGTTGTGCACTA+GGG - Chr8:34616337-34616356 MsG0880044035.01.T01:CDS 40.0%
GTACGTCTCATCCTTCAATT+TGG - Chr8:34618350-34618369 MsG0880044035.01.T01:intron 40.0%
GTCACGGTGACATTAAATCT+GGG + Chr8:34616483-34616502 None:intergenic 40.0%
GTGACATTAGATGTGTTCTG+TGG + Chr8:34616449-34616468 None:intergenic 40.0%
TAGATGAGTTTGGGAACAAG+TGG - Chr8:34616712-34616731 MsG0880044035.01.T01:intron 40.0%
TAGGAACGATTCGTCTTTGA+TGG - Chr8:34617283-34617302 MsG0880044035.01.T01:intron 40.0%
TCACTATACCCTTGATCCTA+TGG - Chr8:34616533-34616552 MsG0880044035.01.T01:intron 40.0%
TCGGAGGGACTAAATTGAAT+GGG - Chr8:34618379-34618398 MsG0880044035.01.T01:CDS 40.0%
TGCACAACATAGTAAGCTAG+TGG + Chr8:34616334-34616353 None:intergenic 40.0%
TGGCCCTGTGTTATGAAATA+TGG - Chr8:34615452-34615471 MsG0880044035.01.T01:three_prime_UTR 40.0%
TGTCACGGTGACATTAAATC+TGG + Chr8:34616484-34616503 None:intergenic 40.0%
TTCGGAGGGACTAAATTGAA+TGG - Chr8:34618378-34618397 MsG0880044035.01.T01:CDS 40.0%
TTGTCATTGCCATTGCATCT+GGG - Chr8:34616423-34616442 MsG0880044035.01.T01:CDS 40.0%
! AATGTGATCTTGGCGTTGAA+TGG - Chr8:34615874-34615893 MsG0880044035.01.T01:intron 40.0%
! CAAGGGTATAGTGATTTACC+GGG + Chr8:34616527-34616546 None:intergenic 40.0%
! GGAAAAGAAAGCGTACCATT+TGG + Chr8:34617756-34617775 None:intergenic 40.0%
! TTCGACAGATGATGGTAAGT+GGG - Chr8:34615681-34615700 MsG0880044035.01.T01:CDS 40.0%
!! AGGGTTTTGATGGATGTGTA+TGG + Chr8:34617592-34617611 None:intergenic 40.0%
!! AGGTTGTTGTTGTGCCATTT+GGG + Chr8:34617716-34617735 None:intergenic 40.0%
!! CTACGGAAGGCTTGTTATAT+TGG + Chr8:34616283-34616302 None:intergenic 40.0%
!! GAAGGTTACTAGGGTTTTGA+TGG + Chr8:34617602-34617621 None:intergenic 40.0%
!! GATAACAAACTTGGTGGTGA+TGG + Chr8:34620601-34620620 None:intergenic 40.0%
!! TGGAGGTGAGTTGTTGTTTA+TGG - Chr8:34616553-34616572 MsG0880044035.01.T01:intron 40.0%
AACTCACCTCCATAGGATCA+AGG + Chr8:34616545-34616564 None:intergenic 45.0%
ACATATTGGGAGGAAGCTCT+TGG + Chr8:34616306-34616325 None:intergenic 45.0%
ACGGGTAGCATAGATGAGTT+TGG - Chr8:34616702-34616721 MsG0880044035.01.T01:intron 45.0%
ACTCACCTCCATAGGATCAA+GGG + Chr8:34616544-34616563 None:intergenic 45.0%
AGAAACTCTCGAACACCATG+AGG - Chr8:34617855-34617874 MsG0880044035.01.T01:intron 45.0%
AGTGGAAGGAACATATTGGG+AGG + Chr8:34616316-34616335 None:intergenic 45.0%
CAAAGGACGATGCTATGAAG+TGG - Chr8:34620767-34620786 MsG0880044035.01.T01:CDS 45.0%
CGGGTAGCATAGATGAGTTT+GGG - Chr8:34616703-34616722 MsG0880044035.01.T01:intron 45.0%
CTATACCCTTGATCCTATGG+AGG - Chr8:34616536-34616555 MsG0880044035.01.T01:intron 45.0%
CTCAGGTATGATCCTTCAAC+TGG - Chr8:34620643-34620662 MsG0880044035.01.T01:intron 45.0%
CTTCCGTTTCCAATCCCAAA+TGG - Chr8:34617699-34617718 MsG0880044035.01.T01:intron 45.0%
CTTTCATCCTAGGAACCAGA+GGG + Chr8:34617180-34617199 None:intergenic 45.0%
GAAACTCTCGAACACCATGA+GGG - Chr8:34617856-34617875 MsG0880044035.01.T01:intron 45.0%
GAACACCATGAGGGATATCA+AGG - Chr8:34617865-34617884 MsG0880044035.01.T01:intron 45.0%
GAGGGACTAAATTGAATGGG+TGG - Chr8:34618382-34618401 MsG0880044035.01.T01:CDS 45.0%
GATTGGAAACGGAAGAAGAG+AGG + Chr8:34617694-34617713 None:intergenic 45.0%
GCAATGGCAATGACAATGTG+TGG + Chr8:34616419-34616438 None:intergenic 45.0%
GCATCAAGTTCGACAGATGA+TGG - Chr8:34615673-34615692 MsG0880044035.01.T01:CDS 45.0%
GGCGAGAGAGTGATAGTTTA+GGG - Chr8:34618456-34618475 MsG0880044035.01.T01:intron 45.0%
GGTTGTGATGTGATGTGATG+CGG + Chr8:34617673-34617692 None:intergenic 45.0%
GTCTATCAAACCAGCTCAAG+TGG - Chr8:34616816-34616835 MsG0880044035.01.T01:intron 45.0%
TAGTATGTGCCATGCGAAAC+TGG - Chr8:34620244-34620263 MsG0880044035.01.T01:intron 45.0%
TCTGACCTTGATATCCCTCA+TGG + Chr8:34617873-34617892 None:intergenic 45.0%
TCTTTCATCCTAGGAACCAG+AGG + Chr8:34617181-34617200 None:intergenic 45.0%
TGGAGAGGAGAAGGTTACTA+GGG + Chr8:34617611-34617630 None:intergenic 45.0%
TGGCATTAATCCACTTGAGC+TGG + Chr8:34616829-34616848 None:intergenic 45.0%
TGGCGAGAGAGTGATAGTTT+AGG - Chr8:34618455-34618474 MsG0880044035.01.T01:intron 45.0%
TGTGCACTAGGGGTAAATCA+CGG - Chr8:34616348-34616367 MsG0880044035.01.T01:CDS 45.0%
! CACTGGACACATCCTTTTAG+TGG - Chr8:34615628-34615647 MsG0880044035.01.T01:CDS 45.0%
! CGATACACTGTCCGTTCTTT+TGG - Chr8:34619997-34620016 MsG0880044035.01.T01:intron 45.0%
! CTTTGGAAAACACTGGGGTT+GGG + Chr8:34618059-34618078 None:intergenic 45.0%
! GAGGTTGTTGTTGTGCCATT+TGG + Chr8:34617717-34617736 None:intergenic 45.0%
! GATGATGGTAAGTGGGGTAT+TGG - Chr8:34615688-34615707 MsG0880044035.01.T01:CDS 45.0%
! GTACCATTTGGGGTTGGAAA+CGG + Chr8:34617744-34617763 None:intergenic 45.0%
! GTTCGACAGATGATGGTAAG+TGG - Chr8:34615680-34615699 MsG0880044035.01.T01:CDS 45.0%
! GTTTGGATGCAGAGCATCTT+TGG - Chr8:34616678-34616697 MsG0880044035.01.T01:intron 45.0%
! TCGACAGATGATGGTAAGTG+GGG - Chr8:34615682-34615701 MsG0880044035.01.T01:CDS 45.0%
!! GCTTGCTATGTGACTGTTAG+AGG - Chr8:34620042-34620061 MsG0880044035.01.T01:intron 45.0%
!! GTGCCATTTGGGATTGGAAA+CGG + Chr8:34617705-34617724 None:intergenic 45.0%
!! GTTGTTGTGCCATTTGGGAT+TGG + Chr8:34617711-34617730 None:intergenic 45.0%
!! TAAGTGGGGTATTGGTGTTG+TGG - Chr8:34615696-34615715 MsG0880044035.01.T01:CDS 45.0%
!!! ATTTTTTTAGTTTTTTTTTT+TGG + Chr8:34617546-34617565 None:intergenic 5.0%
!!! TTTTTTTGTAAAATATTTTT+GGG + Chr8:34617520-34617539 None:intergenic 5.0%
!!! TTTTTTTTGTAAAATATTTT+TGG + Chr8:34617521-34617540 None:intergenic 5.0%
ATGACTACTTGACTGCCGCT+TGG - Chr8:34619156-34619175 MsG0880044035.01.T01:intron 50.0%
CGTCCTTTGTTACGCGATGT+TGG + Chr8:34620756-34620775 None:intergenic 50.0%
CTGGAGAGGAGAAGGTTACT+AGG + Chr8:34617612-34617631 None:intergenic 50.0%
CTTCCGTTTCCAACCCCAAA+TGG - Chr8:34617738-34617757 MsG0880044035.01.T01:intron 50.0%
GTAAATCACGGGTGGCACTT+TGG - Chr8:34616360-34616379 MsG0880044035.01.T01:CDS 50.0%
GTGCACTAGGGGTAAATCAC+GGG - Chr8:34616349-34616368 MsG0880044035.01.T01:CDS 50.0%
GTGGTCCAGATACAATGGCA+CGG + Chr8:34616400-34616419 None:intergenic 50.0%
TGTGACTGTTAGAGGCGACA+AGG - Chr8:34620050-34620069 MsG0880044035.01.T01:intron 50.0%
TGTGATCCTCAACAAGTCCC+AGG - Chr8:34620810-34620829 MsG0880044035.01.T01:CDS 50.0%
! ATGCAGAGCATCTTTGGCAC+GGG - Chr8:34616684-34616703 MsG0880044035.01.T01:intron 50.0%
! CCAACCCCAGTGTTTTCCAA+AGG - Chr8:34618057-34618076 MsG0880044035.01.T01:intron 50.0%
! CCTTTGGAAAACACTGGGGT+TGG + Chr8:34618060-34618079 None:intergenic 50.0%
! CGACAAGGCAATGCAGCTTT+TGG - Chr8:34620065-34620084 MsG0880044035.01.T01:intron 50.0%
! GAAAGCGTACCATTTGGGGT+TGG + Chr8:34617750-34617769 None:intergenic 50.0%
! GATGCAGAGCATCTTTGGCA+CGG - Chr8:34616683-34616702 MsG0880044035.01.T01:intron 50.0%
! GCATTAACCCTCTGGTTCCT+AGG - Chr8:34617170-34617189 MsG0880044035.01.T01:intron 50.0%
! TGTCACCGTGCCATTGTATC+TGG - Chr8:34616392-34616411 MsG0880044035.01.T01:CDS 50.0%
!! CAGGTGTTGGAACAACTCAG+TGG - Chr8:34618033-34618052 MsG0880044035.01.T01:intron 50.0%
!! GAGTGCTCATACGGTGTTGT+TGG - Chr8:34615564-34615583 MsG0880044035.01.T01:three_prime_UTR 50.0%
!! GCAATGCAGCTTTTGGAGAG+CGG - Chr8:34620072-34620091 MsG0880044035.01.T01:intron 50.0%
!! GCTTTTGGAGAGCGGTTTGA+AGG - Chr8:34620080-34620099 MsG0880044035.01.T01:intron 50.0%
!! GTGTTGTTGGAGGCACTAAG+TGG - Chr8:34615577-34615596 MsG0880044035.01.T01:exon 50.0%
!! TGCTCATACGGTGTTGTTGG+AGG - Chr8:34615567-34615586 MsG0880044035.01.T01:three_prime_UTR 50.0%
AGGAAGCTCTTGGCTACGGA+AGG + Chr8:34616296-34616315 None:intergenic 55.0%
ATGACTACCTGACTGCCGCT+TGG - Chr8:34618572-34618591 MsG0880044035.01.T01:CDS 55.0%
CACTAGGGGTAAATCACGGG+TGG - Chr8:34616352-34616371 MsG0880044035.01.T01:CDS 55.0%
GGAGAGCGGTTTGAAGGTGA+AGG - Chr8:34620086-34620105 MsG0880044035.01.T01:intron 55.0%
GTTCTGTGGCCCAGATGCAA+TGG + Chr8:34616435-34616454 None:intergenic 55.0%
TCGTCTCACCAGAGCTGCAA+AGG - Chr8:34617930-34617949 MsG0880044035.01.T01:intron 55.0%
TGGGAGGAAGCTCTTGGCTA+CGG + Chr8:34616300-34616319 None:intergenic 55.0%
TGGGGTTGGAAACGGAAGAG+AGG + Chr8:34617736-34617755 None:intergenic 55.0%
!! CAATCGCCTGGGACTTGTTG+AGG + Chr8:34620819-34620838 None:intergenic 55.0%
!! TTCGTTGTTCTGGAGCGTCC+TGG - Chr8:34620685-34620704 MsG0880044035.01.T01:intron 55.0%
ATGACTGCCTGACTGCCGCT+TGG - Chr8:34619604-34619623 MsG0880044035.01.T01:intron 60.0%
GAGCGTCCTGGTTACCGTGT+GGG - Chr8:34620697-34620716 MsG0880044035.01.T01:intron 60.0%
TTAGGCTCCAAGCGGCAGTC+AGG + Chr8:34618582-34618601 None:intergenic 60.0%
!! TGCGGTGCTGCAGTGAAGCA+AGG + Chr8:34617655-34617674 None:intergenic 60.0%
ACCGACGACGACGTCCCACA+CGG + Chr8:34620714-34620733 None:intergenic 65.0%
ACCGTGTGGGACGTCGTCGT+CGG - Chr8:34620710-34620729 MsG0880044035.01.T01:CDS 65.0%
CGACGTCCCACACGGTAACC+AGG + Chr8:34620706-34620725 None:intergenic 65.0%
CGTCGGTGCAAGGCTCGTGT+TGG - Chr8:34620727-34620746 MsG0880044035.01.T01:CDS 65.0%
! GGAGCGTCCTGGTTACCGTG+TGG - Chr8:34620696-34620715 MsG0880044035.01.T01:intron 65.0%
GGGACGTCGTCGTCGGTGCA+AGG - Chr8:34620717-34620736 MsG0880044035.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 34615403 34621036 34615403 ID=MsG0880044035.01;Name=MsG0880044035.01
Chr8 mRNA 34615403 34621036 34615403 ID=MsG0880044035.01.T01;Parent=MsG0880044035.01;Name=MsG0880044035.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0.75|0.8|1|1|1|5|193|290
Chr8 exon 34620706 34621036 34620706 ID=MsG0880044035.01.T01:exon:3619;Parent=MsG0880044035.01.T01
Chr8 exon 34618488 34618594 34618488 ID=MsG0880044035.01.T01:exon:3620;Parent=MsG0880044035.01.T01
Chr8 exon 34618361 34618403 34618361 ID=MsG0880044035.01.T01:exon:3621;Parent=MsG0880044035.01.T01
Chr8 exon 34616249 34616444 34616249 ID=MsG0880044035.01.T01:exon:3622;Parent=MsG0880044035.01.T01
Chr8 exon 34615403 34615791 34615403 ID=MsG0880044035.01.T01:exon:3623;Parent=MsG0880044035.01.T01
Chr8 CDS 34620706 34621036 34620706 ID=MsG0880044035.01.T01:cds;Parent=MsG0880044035.01.T01
Chr8 CDS 34618488 34618594 34618488 ID=MsG0880044035.01.T01:cds;Parent=MsG0880044035.01.T01
Chr8 CDS 34618361 34618403 34618361 ID=MsG0880044035.01.T01:cds;Parent=MsG0880044035.01.T01
Chr8 CDS 34616249 34616444 34616249 ID=MsG0880044035.01.T01:cds;Parent=MsG0880044035.01.T01
Chr8 CDS 34615596 34615791 34615596 ID=MsG0880044035.01.T01:cds;Parent=MsG0880044035.01.T01
Chr8 three_prime_UTR 34615403 34615595 34615403 ID=MsG0880044035.01.T01:three_prime_utr;Parent=MsG0880044035.01.T01
Gene Sequence

>MsG0880044035.01.T01

TTGGAGAGAAATATTATTGATGCTGATGAAGATATTATACTTCATGTTTTGGCCCTGTGTTATGAAATATGGTGTGCTAGAAATAAGAAATGTTTTGAGGGGACTGATGTTTATGTGACTGTCATTGTTCAAAAGACACAAAGATCTATTGTGAATTTTAAGAGTGCTCATACGGTGTTGTTGGAGGCACTAAGTGGAGATCCAATTTTGTCAATATCTGATGTTCACTGGACACATCCTTTTAGTGGTTTCTATAAACTTAATGTTGATGCATCAAGTTCGACAGATGATGGTAAGTGGGGTATTGGTGTTGTGGTCAGAGATAACGAATGTTTCGGAGAAGAAACTCTCGAACACCATGAGGGATATCAAGGTCAGAAACTCGTTCTTAATATCTCTGTTGGTGAAAGTGGCGATCGTCTCACCAGAGCTGCAAAGGTGTTGGAACAACTCAGTGGCCCAACCCCAGTGTTTTCCAAAGCTCGATACACTGTCCGTTCTTTTGGTATTAGAAGAAATGAAAAGATTGCTTGCTATGTGACTGTTAGAGGCGACAAGGCAATGCAGCTTTTGGAGAGCGGTTTGAAGGTGAAGGAATATGAATTGCTGAGAAGAAATTTTAGTGATACTGGTTGTTTTGGATTCGGAATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCAACTGGCATTTATGGAATGGACTTTTTCGTTGTTCTGGAGCGTCCTGGTTACCGTGTGGGACGTCGTCGTCGGTGCAAGGCTCGTGTTGGAATCCAACATCGCGTAACAAAGGACGATGCTATGAAGTGGTTCCAAGTGAAATATGAAGGTGTGATCCTCAACAAGTCCCAGGCGATTGTTTAG
Protein sequence

>MsG0880044035.01.T01

LERNIIDADEDIILHVLALCYEIWCARNKKCFEGTDVYVTVIVQKTQRSIVNFKSAHTVLLEALSGDPILSISDVHWTHPFSGFYKLNVDASSSTDDGKWGIGVVVRDNECFGEETLEHHEGYQGQKLVLNISVGESGDRLTRAAKVLEQLSGPTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAIV*