Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048922.01.T01 | XP_013467927.1 | 96.575 | 146 | 3 | 1 | 1 | 146 | 1 | 144 | 9.53E-96 | 282 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048922.01.T01 | P49215 | 87.023 | 131 | 15 | 1 | 1 | 129 | 1 | 131 | 1.88E-77 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048922.01.T01 | I3SPL5 | 96.575 | 146 | 3 | 1 | 1 | 146 | 1 | 144 | 4.55e-96 | 282 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048040.01 | MsG0080048922.01 | 0.806479 | 8.062097e-50 | 4.380494e-47 |
| MsG0080048922.01 | MsG0180000096.01 | 0.817526 | 3.150281e-52 | 2.299694e-49 |
| MsG0080048922.01 | MsG0180000118.01 | 0.803215 | 3.877328e-49 | 1.937288e-46 |
| MsG0080048922.01 | MsG0180001169.01 | 0.876363 | 1.482208e-68 | 7.165533e-65 |
| MsG0080048922.01 | MsG0180002738.01 | 0.849846 | 2.487254e-60 | 4.778335e-57 |
| MsG0080048922.01 | MsG0180002810.01 | 0.822342 | 2.493235e-53 | 2.081209e-50 |
| MsG0080048922.01 | MsG0180003313.01 | 0.814458 | 1.524960e-51 | 1.023795e-48 |
| MsG0080048922.01 | MsG0180003585.01 | 0.872956 | 2.134254e-67 | 9.100014e-64 |
| MsG0080048922.01 | MsG0180003897.01 | 0.827545 | 1.474590e-54 | 1.427947e-51 |
| MsG0080048922.01 | MsG0180003905.01 | 0.814186 | 1.751605e-51 | 1.167301e-48 |
| MsG0080048922.01 | MsG0180004064.01 | 0.840127 | 1.048362e-57 | 1.479075e-54 |
| MsG0080048922.01 | MsG0180004652.01 | 0.827051 | 1.936275e-54 | 1.848242e-51 |
| MsG0080048922.01 | MsG0180004946.01 | 0.824205 | 9.156581e-54 | 8.056762e-51 |
| MsG0080048922.01 | MsG0180005573.01 | 0.865207 | 6.982917e-65 | 2.253201e-61 |
| MsG0080048922.01 | MsG0280006301.01 | 0.830558 | 2.745235e-55 | 2.902309e-52 |
| MsG0080048922.01 | MsG0280006629.01 | 0.830153 | 3.446586e-55 | 3.601590e-52 |
| MsG0080048922.01 | MsG0280006717.01 | 0.837737 | 4.357540e-57 | 5.713235e-54 |
| MsG0080048922.01 | MsG0280006747.01 | 0.873908 | 1.020715e-67 | 4.504654e-64 |
| MsG0080048922.01 | MsG0280007055.01 | 0.843979 | 1.003823e-58 | 1.597519e-55 |
| MsG0080048922.01 | MsG0280007084.01 | 0.830476 | 2.874808e-55 | 3.031992e-52 |
| MsG0080048922.01 | MsG0280007606.01 | 0.800632 | 1.315941e-48 | 6.157635e-46 |
| MsG0080048922.01 | MsG0280007995.01 | 0.866702 | 2.350997e-65 | 7.998800e-62 |
| MsG0080048922.01 | MsG0280010519.01 | 0.846613 | 1.945444e-59 | 3.367623e-56 |
| MsG0080048922.01 | MsG0280011149.01 | 0.816079 | 6.652722e-52 | 4.668130e-49 |
| MsG0080048922.01 | MsG0380015402.01 | 0.802605 | 5.183005e-49 | 2.549670e-46 |
| MsG0080048922.01 | MsG0380015494.01 | 0.805603 | 1.232738e-49 | 6.549326e-47 |
| MsG0080048922.01 | MsG0380015857.01 | 0.851293 | 9.750721e-61 | 1.964475e-57 |
| MsG0080048922.01 | MsG0380016246.01 | 0.818197 | 2.222131e-52 | 1.652321e-49 |
| MsG0080048922.01 | MsG0380016678.01 | 0.882926 | 6.913221e-71 | 4.292641e-67 |
| MsG0080048922.01 | MsG0380016744.01 | 0.836325 | 9.999406e-57 | 1.256030e-53 |
| MsG0080048922.01 | MsG0380016760.01 | 0.895519 | 8.871821e-76 | 9.237080e-72 |
| MsG0080048922.01 | MsG0380017156.01 | 0.803517 | 3.357332e-49 | 1.690593e-46 |
| MsG0080048922.01 | MsG0380017588.01 | 0.817416 | 3.335575e-52 | 2.427758e-49 |
| MsG0080048922.01 | MsG0380017826.01 | 0.819192 | 1.321419e-52 | 1.009905e-49 |
| MsG0080048922.01 | MsG0380018056.01 | 0.814085 | 1.843384e-51 | 1.225099e-48 |
| MsG0080048922.01 | MsG0480018164.01 | 0.822024 | 2.955769e-53 | 2.444744e-50 |
| MsG0080048922.01 | MsG0480019165.01 | 0.848209 | 7.091108e-60 | 1.291580e-56 |
| MsG0080048922.01 | MsG0480019632.01 | 0.855607 | 5.631912e-62 | 1.307537e-58 |
| MsG0080048922.01 | MsG0480020796.01 | 0.815472 | 9.085257e-52 | 6.270197e-49 |
| MsG0080048922.01 | MsG0480020895.01 | 0.835572 | 1.552408e-56 | 1.905880e-53 |
| MsG0080048922.01 | MsG0480020911.01 | 0.841929 | 3.525701e-58 | 5.260537e-55 |
| MsG0080048922.01 | MsG0480021279.01 | 0.852792 | 3.658137e-61 | 7.733457e-58 |
| MsG0080048922.01 | MsG0480021417.01 | 0.850317 | 1.835762e-60 | 3.581868e-57 |
| MsG0080048922.01 | MsG0480022006.01 | 0.833837 | 4.238755e-56 | 4.940782e-53 |
| MsG0080048922.01 | MsG0480022363.01 | 0.885928 | 5.322523e-72 | 3.723320e-68 |
| MsG0080048922.01 | MsG0480023380.01 | 0.821700 | 3.512330e-53 | 2.878638e-50 |
| MsG0080048922.01 | MsG0480023774.01 | 0.863528 | 2.334853e-64 | 7.100475e-61 |
| MsG0080048922.01 | MsG0480023931.01 | 0.829979 | 3.800823e-55 | 3.951794e-52 |
| MsG0080048922.01 | MsG0480023970.01 | 0.818575 | 1.824640e-52 | 1.370961e-49 |
| MsG0080048922.01 | MsG0480023996.01 | 0.878056 | 3.824434e-69 | 1.967636e-65 |
| MsG0080048922.01 | MsG0580024059.01 | 0.809738 | 1.631537e-50 | 9.656130e-48 |
| MsG0080048922.01 | MsG0580024481.01 | 0.852468 | 4.524939e-61 | 9.464144e-58 |
| MsG0080048922.01 | MsG0580024540.01 | 0.865482 | 5.717899e-65 | 1.863222e-61 |
| MsG0080048922.01 | MsG0580024738.01 | 0.877845 | 4.530511e-69 | 2.312704e-65 |
| MsG0080048922.01 | MsG0580024894.01 | 0.801129 | 1.041447e-48 | 4.935166e-46 |
| MsG0080048922.01 | MsG0580025073.01 | 0.816830 | 4.518125e-52 | 3.235893e-49 |
| MsG0080048922.01 | MsG0580025750.01 | 0.912448 | 1.925768e-83 | 4.332915e-79 |
| MsG0080048922.01 | MsG0580026029.01 | 0.827204 | 1.780297e-54 | 1.707098e-51 |
| MsG0080048922.01 | MsG0580026446.01 | 0.809547 | 1.792517e-50 | 1.055518e-47 |
| MsG0080048922.01 | MsG0580029703.01 | 0.801268 | 9.756461e-49 | 4.639398e-46 |
| MsG0080048922.01 | MsG0580030073.01 | 0.897041 | 2.064058e-76 | 2.290720e-72 |
| MsG0080048922.01 | MsG0680031368.01 | 0.807974 | 3.888084e-50 | 2.196106e-47 |
| MsG0080048922.01 | MsG0680032459.01 | 0.835247 | 1.875539e-56 | 2.280596e-53 |
| MsG0080048922.01 | MsG0680035611.01 | 0.829005 | 6.556949e-55 | 6.625309e-52 |
| MsG0080048922.01 | MsG0780036015.01 | 0.834832 | 2.385535e-56 | 2.864599e-53 |
| MsG0080048922.01 | MsG0780036859.01 | 0.831517 | 1.595776e-55 | 1.735836e-52 |
| MsG0080048922.01 | MsG0780037097.01 | 0.845146 | 4.871368e-59 | 8.041693e-56 |
| MsG0080048922.01 | MsG0780038383.01 | 0.842842 | 2.019299e-58 | 3.100508e-55 |
| MsG0080048922.01 | MsG0780040978.01 | 0.819783 | 9.686633e-53 | 7.526728e-50 |
| MsG0080048922.01 | MsG0780040990.01 | 0.803711 | 3.060574e-49 | 1.548742e-46 |
| MsG0080048922.01 | MsG0780041058.01 | 0.808284 | 3.340030e-50 | 1.902095e-47 |
| MsG0080048922.01 | MsG0780041240.01 | 0.806961 | 6.380078e-50 | 3.509727e-47 |
| MsG0080048922.01 | MsG0780041244.01 | 0.817425 | 3.319301e-52 | 2.416536e-49 |
| MsG0080048922.01 | MsG0780041461.01 | 0.859202 | 4.870320e-63 | 1.275857e-59 |
| MsG0080048922.01 | MsG0780041522.01 | 0.909844 | 3.630743e-82 | 7.205181e-78 |
| MsG0080048922.01 | MsG0780041790.01 | 0.835186 | 1.942605e-56 | 2.357643e-53 |
| MsG0080048922.01 | MsG0880042517.01 | 0.817803 | 2.728095e-52 | 2.006793e-49 |
| MsG0080048922.01 | MsG0880042657.01 | 0.813864 | 2.062991e-51 | 1.362850e-48 |
| MsG0080048922.01 | MsG0880043076.01 | 0.894272 | 2.881242e-75 | 2.844165e-71 |
| MsG0080048922.01 | MsG0880044003.01 | 0.810120 | 1.349784e-50 | 8.068878e-48 |
| MsG0080048922.01 | MsG0880044035.01 | 0.805750 | 1.147980e-49 | 6.122785e-47 |
| MsG0080048922.01 | MsG0880045356.01 | 0.804837 | 1.783207e-49 | 9.290093e-47 |
| MsG0080048922.01 | MsG0880045836.01 | 0.830011 | 3.734574e-55 | 3.886253e-52 |
| MsG0080048922.01 | MsG0880046220.01 | 0.840136 | 1.042823e-57 | 1.471688e-54 |
| MsG0080048922.01 | MsG0880046486.01 | 0.839490 | 1.536222e-57 | 2.124907e-54 |
| MsG0080048922.01 | MsG0880046760.01 | 0.838360 | 3.011959e-57 | 4.024546e-54 |
| MsG0080048922.01 | MsG0880047146.01 | 0.810719 | 1.002391e-50 | 6.087934e-48 |
| MsG0080048922.01 | MsG0880047310.01 | 0.829155 | 6.030797e-55 | 6.121267e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180003313.01 | MsG0080048922.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048922.01.T01 | MTR_1g058250 | 96.575 | 146 | 3 | 1 | 1 | 146 | 1 | 144 | 1.15e-99 | 282 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048922.01.T01 | AT5G04800 | 76.667 | 150 | 22 | 2 | 1 | 146 | 1 | 141 | 3.71e-77 | 225 |
| MsG0080048922.01.T01 | AT5G04800 | 76.667 | 150 | 22 | 2 | 1 | 146 | 1 | 141 | 3.71e-77 | 225 |
| MsG0080048922.01.T01 | AT5G04800 | 76.667 | 150 | 22 | 2 | 1 | 146 | 1 | 141 | 3.71e-77 | 225 |
| MsG0080048922.01.T01 | AT5G04800 | 76.667 | 150 | 22 | 2 | 1 | 146 | 1 | 141 | 3.71e-77 | 225 |
| MsG0080048922.01.T01 | AT2G04390 | 78.912 | 147 | 24 | 2 | 1 | 146 | 1 | 141 | 3.11e-76 | 223 |
| MsG0080048922.01.T01 | AT2G05220 | 78.767 | 146 | 25 | 2 | 1 | 146 | 1 | 140 | 4.82e-76 | 223 |
| MsG0080048922.01.T01 | AT2G05220 | 78.767 | 146 | 25 | 2 | 1 | 146 | 1 | 140 | 4.82e-76 | 223 |
| MsG0080048922.01.T01 | AT3G10610 | 80.576 | 139 | 20 | 2 | 1 | 135 | 1 | 136 | 1.68e-74 | 219 |
Find 45 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGATTTCTTCACGGTTT+TGG | 0.256241 | contig540end:-25895 | MsG0080048922.01.T01:intergenic |
| CGAGATTCCCGGTGTTGTTC+AGG | 0.275016 | contig540end:+26214 | MsG0080048922.01.T01:CDS |
| GCTGCTGGTGGTGGTGGTGC+TGG | 0.283520 | contig540end:+26284 | MsG0080048922.01.T01:CDS |
| CGTCTTCGCAACAAGATTGC+TGG | 0.339095 | contig540end:+26011 | MsG0080048922.01.T01:CDS |
| TTCCTGATGTTTCTGCTATT+AGG | 0.341443 | contig540end:+26132 | MsG0080048922.01.T01:CDS |
| TTCTTCAAGGATCTTCTTGT+TGG | 0.343538 | contig540end:-25967 | MsG0080048922.01.T01:intergenic |
| TTGTTGCGAAGACGCTTTGA+TGG | 0.348895 | contig540end:-26002 | MsG0080048922.01.T01:intergenic |
| ATCCCATTCGGTCGTGGTGC+TGG | 0.359143 | contig540end:+26260 | MsG0080048922.01.T01:CDS |
| CCGAATGGGATCTGCTGAAC+AGG | 0.361093 | contig540end:-26248 | MsG0080048922.01.T01:intergenic |
| GCTGGTGCTGCTGGTGGTGG+TGG | 0.367461 | contig540end:+26278 | MsG0080048922.01.T01:CDS |
| GGGATCTGCTGAACAGGAAC+AGG | 0.372363 | contig540end:-26242 | MsG0080048922.01.T01:intergenic |
| GGTCGTGGTGCTGGTGCTGC+TGG | 0.373909 | contig540end:+26269 | MsG0080048922.01.T01:CDS |
| CTTGGTATGTCCGAGATTCC+CGG | 0.385581 | contig540end:+26203 | MsG0080048922.01.T01:CDS |
| CTGGTGGTGGTGGTGCTGGA+AGG | 0.390747 | contig540end:+26288 | MsG0080048922.01.T01:CDS |
| CCTTCTGAATACGTTTCATA+AGG | 0.423532 | contig540end:-26046 | MsG0080048922.01.T01:intergenic |
| CTAGACATGCTTGCTGCTCT+TGG | 0.432500 | contig540end:+26185 | MsG0080048922.01.T01:CDS |
| GGTGCTGGTGCTGCTGGTGG+TGG | 0.435254 | contig540end:+26275 | MsG0080048922.01.T01:CDS |
| TTCAATGAAATTCCACGAAC+AGG | 0.443778 | contig540end:-26071 | MsG0080048922.01.T01:intergenic |
| CTGAACAACACCGGGAATCT+CGG | 0.461504 | contig540end:-26213 | MsG0080048922.01.T01:intergenic |
| GAATCAAAGCAACTTCTTCA+AGG | 0.471503 | contig540end:-25980 | MsG0080048922.01.T01:intergenic |
| CCTGTTCAGCAGATCCCATT+CGG | 0.473555 | contig540end:+26248 | MsG0080048922.01.T01:CDS |
| CAAGAGCAGCAAGCATGTCT+AGG | 0.477650 | contig540end:-26184 | MsG0080048922.01.T01:intergenic |
| GTGGTGGTGGTGCTGGAAGG+AGG | 0.481041 | contig540end:+26291 | MsG0080048922.01.T01:CDS |
| TGATCATATTGAGGTTGATA+AGG | 0.481558 | contig540end:+26157 | MsG0080048922.01.T01:CDS |
| CAAGGATCTTCTTGTTGGTG+TGG | 0.483634 | contig540end:-25962 | MsG0080048922.01.T01:intergenic |
| TTGACGAGATGATTTCTTCA+CGG | 0.484691 | contig540end:-25901 | MsG0080048922.01.T01:intergenic |
| CACCAGCACCACGACCGAAT+GGG | 0.505188 | contig540end:-26262 | MsG0080048922.01.T01:intergenic |
| GTCCTAATAGCAGAAACATC+AGG | 0.505221 | contig540end:-26134 | MsG0080048922.01.T01:intergenic |
| GGAGGAGCGTGAGCGTCGTA+TGG | 0.521163 | contig540end:+26103 | MsG0080048922.01.T01:CDS |
| TTTGGTTCGGACTCGACCCA+TGG | 0.522820 | contig540end:-25877 | MsG0080048922.01.T01:intergenic |
| ATTCAGAAGGGACCTGTTCG+TGG | 0.526647 | contig540end:+26059 | MsG0080048922.01.T01:CDS |
| CGTGGTGCTGGTGCTGCTGG+TGG | 0.530900 | contig540end:+26272 | MsG0080048922.01.T01:CDS |
| CAGCAGATCCCATTCGGTCG+TGG | 0.540344 | contig540end:+26254 | MsG0080048922.01.T01:CDS |
| GTGGAAATCGAGTGTCATCT+TGG | 0.542107 | contig540end:-25943 | MsG0080048922.01.T01:intergenic |
| TATTAGGACTGATCATATTG+AGG | 0.542204 | contig540end:+26148 | MsG0080048922.01.T01:CDS |
| GCACCAGCACCACGACCGAA+TGG | 0.558262 | contig540end:-26263 | MsG0080048922.01.T01:intergenic |
| AAGAGCAGCAAGCATGTCTA+GGG | 0.560169 | contig540end:-26183 | MsG0080048922.01.T01:intergenic |
| TTCATTGAAGCTGCAAGAGG+AGG | 0.567846 | contig540end:+26085 | MsG0080048922.01.T01:CDS |
| CCTTATGAAACGTATTCAGA+AGG | 0.588661 | contig540end:+26046 | MsG0080048922.01.T01:CDS |
| AGGGTCAACCTGAACAACAC+CGG | 0.593915 | contig540end:-26222 | MsG0080048922.01.T01:intergenic |
| GGGTCAACCTGAACAACACC+GGG | 0.608103 | contig540end:-26221 | MsG0080048922.01.T01:intergenic |
| AATACGTTTCATAAGGTGAG+TGG | 0.609703 | contig540end:-26039 | MsG0080048922.01.T01:intergenic |
| AATTTCATTGAAGCTGCAAG+AGG | 0.634258 | contig540end:+26082 | MsG0080048922.01.T01:CDS |
| CTTATGAAACGTATTCAGAA+GGG | 0.635445 | contig540end:+26047 | MsG0080048922.01.T01:CDS |
| GGATCTGCTGAACAGGAACA+GGG | 0.673645 | contig540end:-26241 | MsG0080048921.01.T01:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| CTTATGAAACGTATTCAGAA+GGG | + | contig540end:26047-26066 | MsG0080048922.01.T01:CDS | 30.0% | |
| TATTAGGACTGATCATATTG+AGG | + | contig540end:26148-26167 | MsG0080048922.01.T01:CDS | 30.0% | |
| !! | TGATCATATTGAGGTTGATA+AGG | + | contig540end:26157-26176 | MsG0080048922.01.T01:CDS | 30.0% |
| AATACGTTTCATAAGGTGAG+TGG | - | contig540end:26042-26061 | MsG0080048921.01.T01:intergenic | 35.0% | |
| AATTTCATTGAAGCTGCAAG+AGG | + | contig540end:26082-26101 | MsG0080048922.01.T01:CDS | 35.0% | |
| CCTTATGAAACGTATTCAGA+AGG | + | contig540end:26046-26065 | MsG0080048922.01.T01:CDS | 35.0% | |
| CCTTCTGAATACGTTTCATA+AGG | - | contig540end:26049-26068 | MsG0080048922.01.T01:intergenic | 35.0% | |
| GAATCAAAGCAACTTCTTCA+AGG | - | contig540end:25983-26002 | MsG0080048922.01.T01:intergenic | 35.0% | |
| TTCAATGAAATTCCACGAAC+AGG | - | contig540end:26074-26093 | MsG0080048922.01.T01:intergenic | 35.0% | |
| TTCTTCAAGGATCTTCTTGT+TGG | - | contig540end:25970-25989 | MsG0080048922.01.T01:intergenic | 35.0% | |
| TTGACGAGATGATTTCTTCA+CGG | - | contig540end:25904-25923 | MsG0080048922.01.T01:intergenic | 35.0% | |
| ! | AGATGATTTCTTCACGGTTT+TGG | - | contig540end:25898-25917 | MsG0080048922.01.T01:intergenic | 35.0% |
| ! | TTCCTGATGTTTCTGCTATT+AGG | + | contig540end:26132-26151 | MsG0080048922.01.T01:CDS | 35.0% |
| !!! | ATTTCTTCACGGTTTTGGTT+CGG | - | contig540end:25893-25912 | MsG0080048922.01.T01:intergenic | 35.0% |
| GTCCTAATAGCAGAAACATC+AGG | - | contig540end:26137-26156 | MsG0080048922.01.T01:intergenic | 40.0% | |
| AAGAGCAGCAAGCATGTCTA+GGG | - | contig540end:26186-26205 | MsG0080048921.01.T01:intergenic | 45.0% | |
| CAAGGATCTTCTTGTTGGTG+TGG | - | contig540end:25965-25984 | MsG0080048922.01.T01:intergenic | 45.0% | |
| GTGGAAATCGAGTGTCATCT+TGG | - | contig540end:25946-25965 | MsG0080048922.01.T01:intergenic | 45.0% | |
| TTCATTGAAGCTGCAAGAGG+AGG | + | contig540end:26085-26104 | MsG0080048922.01.T01:CDS | 45.0% | |
| TTGTTGCGAAGACGCTTTGA+TGG | - | contig540end:26005-26024 | MsG0080048922.01.T01:intergenic | 45.0% | |
| AGGGTCAACCTGAACAACAC+CGG | - | contig540end:26225-26244 | MsG0080048922.01.T01:intergenic | 50.0% | |
| ATTCAGAAGGGACCTGTTCG+TGG | + | contig540end:26059-26078 | MsG0080048922.01.T01:CDS | 50.0% | |
| CAAGAGCAGCAAGCATGTCT+AGG | - | contig540end:26187-26206 | MsG0080048922.01.T01:intergenic | 50.0% | |
| CCTGTTCAGCAGATCCCATT+CGG | + | contig540end:26248-26267 | MsG0080048922.01.T01:CDS | 50.0% | |
| CGTCTTCGCAACAAGATTGC+TGG | + | contig540end:26011-26030 | MsG0080048922.01.T01:CDS | 50.0% | |
| CTGAACAACACCGGGAATCT+CGG | - | contig540end:26216-26235 | MsG0080048922.01.T01:intergenic | 50.0% | |
| CTTGGTATGTCCGAGATTCC+CGG | + | contig540end:26203-26222 | MsG0080048922.01.T01:CDS | 50.0% | |
| GGATCTGCTGAACAGGAACA+GGG | - | contig540end:26244-26263 | MsG0080048922.01.T01:intergenic | 50.0% | |
| ! | CTAGACATGCTTGCTGCTCT+TGG | + | contig540end:26185-26204 | MsG0080048922.01.T01:CDS | 50.0% |
| CCGAATGGGATCTGCTGAAC+AGG | - | contig540end:26251-26270 | MsG0080048922.01.T01:intergenic | 55.0% | |
| GGGATCTGCTGAACAGGAAC+AGG | - | contig540end:26245-26264 | MsG0080048922.01.T01:intergenic | 55.0% | |
| GGGTCAACCTGAACAACACC+GGG | - | contig540end:26224-26243 | MsG0080048922.01.T01:intergenic | 55.0% | |
| !! | CGAGATTCCCGGTGTTGTTC+AGG | + | contig540end:26214-26233 | MsG0080048922.01.T01:CDS | 55.0% |
| ATCCCATTCGGTCGTGGTGC+TGG | + | contig540end:26260-26279 | MsG0080048922.01.T01:CDS | 60.0% | |
| CACCAGCACCACGACCGAAT+GGG | - | contig540end:26265-26284 | MsG0080048922.01.T01:intergenic | 60.0% | |
| CAGCAGATCCCATTCGGTCG+TGG | + | contig540end:26254-26273 | MsG0080048922.01.T01:CDS | 60.0% | |
| GCACCAGCACCACGACCGAA+TGG | - | contig540end:26266-26285 | MsG0080048922.01.T01:intergenic | 65.0% | |
| ! | GGAGGAGCGTGAGCGTCGTA+TGG | + | contig540end:26103-26122 | MsG0080048922.01.T01:CDS | 65.0% |
| !! | CTGGTGGTGGTGGTGCTGGA+AGG | + | contig540end:26288-26307 | MsG0080048922.01.T01:CDS | 65.0% |
| !! | GTGGTGGTGGTGCTGGAAGG+AGG | + | contig540end:26291-26310 | MsG0080048922.01.T01:CDS | 65.0% |
| !! | CGTGGTGCTGGTGCTGCTGG+TGG | + | contig540end:26272-26291 | MsG0080048922.01.T01:CDS | 70.0% |
| !! | GCTGCTGGTGGTGGTGGTGC+TGG | + | contig540end:26284-26303 | MsG0080048922.01.T01:CDS | 70.0% |
| !! | GCTGGTGCTGCTGGTGGTGG+TGG | + | contig540end:26278-26297 | MsG0080048922.01.T01:CDS | 70.0% |
| !! | GGTCGTGGTGCTGGTGCTGC+TGG | + | contig540end:26269-26288 | MsG0080048922.01.T01:CDS | 70.0% |
| !! | GGTGCTGGTGCTGCTGGTGG+TGG | + | contig540end:26275-26294 | MsG0080048922.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig540end | gene | 25879 | 26319 | 25879 | ID=MsG0080048922.01;Name=MsG0080048922.01 |
| contig540end | mRNA | 25879 | 26319 | 25879 | ID=MsG0080048922.01.T01;Parent=MsG0080048922.01;Name=MsG0080048922.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|146 |
| contig540end | exon | 25879 | 26319 | 25879 | ID=MsG0080048922.01.T01:exon:22141;Parent=MsG0080048922.01.T01 |
| contig540end | CDS | 25879 | 26319 | 25879 | ID=MsG0080048922.01.T01:cds;Parent=MsG0080048922.01.T01 |
| Gene Sequence |
| Protein sequence |
