Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046337.01.T01 | XP_013457856.1 | 97.67 | 515 | 8 | 1 | 1 | 511 | 6 | 520 | 0 | 1043 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046337.01.T01 | Q9FLD5 | 57.759 | 464 | 183 | 4 | 1 | 458 | 4 | 460 | 0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046337.01.T01 | A0A072UQF5 | 97.670 | 515 | 8 | 1 | 1 | 511 | 6 | 520 | 0.0 | 1043 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044883.01 | MsG0880046337.01 | 0.816121 | 6.511789e-52 | 4.574305e-49 |
| MsG0880045703.01 | MsG0880046337.01 | -0.810771 | 9.767095e-51 | 5.940191e-48 |
| MsG0880045963.01 | MsG0880046337.01 | 0.836975 | 6.826399e-57 | 8.743260e-54 |
| MsG0880046010.01 | MsG0880046337.01 | -0.821384 | 4.154257e-53 | 3.374655e-50 |
| MsG0880046137.01 | MsG0880046337.01 | 0.813829 | 2.099827e-51 | 1.385872e-48 |
| MsG0880046337.01 | MsG0880047057.01 | 0.813670 | 2.275480e-51 | 1.495383e-48 |
| MsG0180004027.01 | MsG0880046337.01 | 0.801209 | 1.003025e-48 | 4.762546e-46 |
| MsG0180004510.01 | MsG0880046337.01 | 0.834570 | 2.777283e-56 | 3.309217e-53 |
| MsG0180005096.01 | MsG0880046337.01 | 0.804924 | 1.710230e-49 | 8.930025e-47 |
| MsG0180005272.01 | MsG0880046337.01 | 0.823288 | 1.501118e-53 | 1.287040e-50 |
| MsG0180005369.01 | MsG0880046337.01 | -0.808706 | 2.715364e-50 | 1.563398e-47 |
| MsG0180006076.01 | MsG0880046337.01 | -0.845558 | 3.768774e-59 | 6.304544e-56 |
| MsG0180006182.01 | MsG0880046337.01 | 0.847734 | 9.588749e-60 | 1.720563e-56 |
| MsG0180006191.01 | MsG0880046337.01 | 0.853114 | 2.959240e-61 | 6.324142e-58 |
| MsG0780040560.01 | MsG0880046337.01 | 0.826525 | 2.586481e-54 | 2.431547e-51 |
| MsG0780040564.01 | MsG0880046337.01 | 0.804863 | 1.761115e-49 | 9.181217e-47 |
| MsG0780040905.01 | MsG0880046337.01 | 0.842617 | 2.318611e-58 | 3.535101e-55 |
| MsG0780040978.01 | MsG0880046337.01 | 0.810724 | 9.998020e-51 | 6.072992e-48 |
| MsG0780040990.01 | MsG0880046337.01 | 0.808009 | 3.822827e-50 | 2.161236e-47 |
| MsG0780041180.01 | MsG0880046337.01 | 0.839320 | 1.700473e-57 | 2.339807e-54 |
| MsG0780041363.01 | MsG0880046337.01 | 0.820396 | 7.011448e-53 | 5.541724e-50 |
| MsG0780041691.01 | MsG0880046337.01 | -0.817751 | 2.802597e-52 | 2.058710e-49 |
| MsG0880042122.01 | MsG0880046337.01 | 0.836880 | 7.218633e-57 | 9.219424e-54 |
| MsG0380013041.01 | MsG0880046337.01 | 0.825813 | 3.819645e-54 | 3.519117e-51 |
| MsG0380014639.01 | MsG0880046337.01 | -0.808212 | 3.460068e-50 | 1.966742e-47 |
| MsG0380014642.01 | MsG0880046337.01 | -0.802416 | 5.668582e-49 | 2.775321e-46 |
| MsG0380014735.01 | MsG0880046337.01 | -0.800726 | 1.259174e-48 | 5.905937e-46 |
| MsG0680031686.01 | MsG0880046337.01 | 0.806900 | 6.570587e-50 | 3.608894e-47 |
| MsG0680035584.01 | MsG0880046337.01 | -0.821278 | 4.396368e-53 | 3.560643e-50 |
| MsG0480019906.01 | MsG0880046337.01 | 0.809994 | 1.436939e-50 | 8.561922e-48 |
| MsG0480021977.01 | MsG0880046337.01 | 0.820177 | 7.871455e-53 | 6.183828e-50 |
| MsG0480023064.01 | MsG0880046337.01 | 0.814236 | 1.707118e-51 | 1.139228e-48 |
| MsG0480023322.01 | MsG0880046337.01 | 0.813963 | 1.961075e-51 | 1.299028e-48 |
| MsG0480023944.01 | MsG0880046337.01 | 0.839201 | 1.826098e-57 | 2.503502e-54 |
| MsG0480023987.01 | MsG0880046337.01 | 0.812029 | 5.207221e-51 | 3.274230e-48 |
| MsG0580024707.01 | MsG0880046337.01 | 0.801990 | 6.937007e-49 | 3.359430e-46 |
| MsG0580025153.01 | MsG0880046337.01 | -0.826922 | 2.079749e-54 | 1.977832e-51 |
| MsG0580025464.01 | MsG0880046337.01 | 0.827881 | 1.224280e-54 | 1.197261e-51 |
| MsG0580025486.01 | MsG0880046337.01 | -0.824079 | 9.800344e-54 | 8.592573e-51 |
| MsG0580025620.01 | MsG0880046337.01 | 0.804883 | 1.743988e-49 | 9.096938e-47 |
| MsG0380015828.01 | MsG0880046337.01 | -0.809355 | 1.971538e-50 | 1.155049e-47 |
| MsG0380015871.01 | MsG0880046337.01 | 0.804552 | 2.045101e-49 | 1.057543e-46 |
| MsG0380016110.01 | MsG0880046337.01 | 0.832309 | 1.017458e-55 | 1.132717e-52 |
| MsG0380016485.01 | MsG0880046337.01 | 0.819735 | 9.936708e-53 | 7.710211e-50 |
| MsG0380016856.01 | MsG0880046337.01 | 0.811373 | 7.230554e-51 | 4.468135e-48 |
| MsG0380017030.01 | MsG0880046337.01 | 0.826908 | 2.095096e-54 | 1.991641e-51 |
| MsG0380017812.01 | MsG0880046337.01 | -0.802932 | 4.435942e-49 | 2.200444e-46 |
| MsG0380017898.01 | MsG0880046337.01 | 0.829293 | 5.581969e-55 | 5.689942e-52 |
| MsG0380017997.01 | MsG0880046337.01 | 0.814940 | 1.192905e-51 | 8.113058e-49 |
| MsG0580028302.01 | MsG0880046337.01 | 0.817459 | 3.261244e-52 | 2.376535e-49 |
| MsG0580028364.01 | MsG0880046337.01 | 0.810034 | 1.408831e-50 | 8.403227e-48 |
| MsG0580029521.01 | MsG0880046337.01 | 0.817927 | 2.558171e-52 | 1.888187e-49 |
| MsG0580030179.01 | MsG0880046337.01 | 0.847872 | 8.786111e-60 | 1.583386e-56 |
| MsG0280007291.01 | MsG0880046337.01 | -0.810353 | 1.202263e-50 | 7.230782e-48 |
| MsG0280007419.01 | MsG0880046337.01 | 0.807258 | 5.517780e-50 | 3.059035e-47 |
| MsG0280009241.01 | MsG0880046337.01 | 0.802762 | 4.810291e-49 | 2.375914e-46 |
| MsG0280009526.01 | MsG0880046337.01 | 0.804539 | 2.057607e-49 | 1.063651e-46 |
| MsG0280010240.01 | MsG0880046337.01 | 0.836842 | 7.382345e-57 | 9.417048e-54 |
| MsG0780037232.01 | MsG0880046337.01 | 0.801866 | 7.356169e-49 | 3.551411e-46 |
| MsG0780038393.01 | MsG0880046337.01 | 0.827542 | 1.476864e-54 | 1.430050e-51 |
| MsG0780038810.01 | MsG0880046337.01 | 0.856250 | 3.653125e-62 | 8.664101e-59 |
| MsG0780039916.01 | MsG0880046337.01 | 0.808672 | 2.760125e-50 | 1.587814e-47 |
| MsG0780040118.01 | MsG0880046337.01 | 0.846155 | 2.593337e-59 | 4.422713e-56 |
| MsG0780040119.01 | MsG0880046337.01 | 0.822621 | 2.148026e-53 | 1.807478e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046337.01.T01 | MTR_4g107370 | 97.670 | 515 | 8 | 1 | 1 | 511 | 6 | 520 | 0.0 | 1043 |
| MsG0880046337.01.T01 | MTR_1g022250 | 62.420 | 471 | 162 | 3 | 3 | 472 | 5 | 461 | 0.0 | 603 |
| MsG0880046337.01.T01 | MTR_7g008040 | 62.121 | 462 | 171 | 3 | 1 | 461 | 1 | 459 | 0.0 | 597 |
| MsG0880046337.01.T01 | MTR_2g030420 | 61.441 | 472 | 162 | 3 | 2 | 472 | 7 | 459 | 0.0 | 590 |
| MsG0880046337.01.T01 | MTR_6g009540 | 60.173 | 462 | 173 | 5 | 3 | 461 | 5 | 458 | 0.0 | 562 |
| MsG0880046337.01.T01 | MTR_6g009520 | 59.524 | 462 | 176 | 4 | 3 | 461 | 7 | 460 | 0.0 | 561 |
| MsG0880046337.01.T01 | MTR_6g009720 | 57.479 | 468 | 184 | 5 | 3 | 461 | 7 | 468 | 0.0 | 537 |
| MsG0880046337.01.T01 | MTR_1g022245 | 54.860 | 463 | 204 | 3 | 1 | 461 | 1 | 460 | 0.0 | 527 |
| MsG0880046337.01.T01 | MTR_6g009553 | 58.000 | 450 | 171 | 6 | 24 | 461 | 4 | 447 | 1.12e-180 | 516 |
| MsG0880046337.01.T01 | MTR_6g009770 | 55.011 | 469 | 172 | 8 | 3 | 461 | 7 | 446 | 4.09e-171 | 492 |
| MsG0880046337.01.T01 | MTR_6g042290 | 53.996 | 463 | 175 | 7 | 8 | 463 | 21 | 452 | 3.56e-168 | 485 |
| MsG0880046337.01.T01 | MTR_6g009510 | 49.891 | 459 | 155 | 7 | 8 | 463 | 21 | 407 | 7.46e-147 | 429 |
| MsG0880046337.01.T01 | MTR_6g009660 | 46.695 | 469 | 176 | 10 | 4 | 461 | 5 | 410 | 4.39e-130 | 387 |
| MsG0880046337.01.T01 | MTR_4g128260 | 41.752 | 491 | 261 | 10 | 1 | 480 | 1 | 477 | 5.24e-123 | 370 |
| MsG0880046337.01.T01 | MTR_2g076970 | 42.060 | 466 | 223 | 9 | 7 | 465 | 6 | 431 | 4.43e-121 | 363 |
| MsG0880046337.01.T01 | MTR_2g076920 | 41.200 | 500 | 234 | 11 | 10 | 495 | 15 | 468 | 4.09e-120 | 361 |
| MsG0880046337.01.T01 | MTR_2g076690 | 41.042 | 480 | 234 | 7 | 10 | 480 | 16 | 455 | 2.37e-117 | 353 |
| MsG0880046337.01.T01 | MTR_2g076710 | 41.164 | 464 | 229 | 9 | 10 | 465 | 14 | 441 | 4.38e-117 | 352 |
| MsG0880046337.01.T01 | MTR_2g076840 | 42.038 | 471 | 224 | 9 | 8 | 470 | 7 | 436 | 6.06e-116 | 358 |
| MsG0880046337.01.T01 | MTR_2g076840 | 51.136 | 264 | 101 | 2 | 198 | 461 | 467 | 702 | 1.90e-84 | 276 |
| MsG0880046337.01.T01 | MTR_5g020980 | 37.773 | 503 | 268 | 9 | 2 | 493 | 11 | 479 | 1.62e-114 | 348 |
| MsG0880046337.01.T01 | MTR_2g076900 | 40.486 | 494 | 238 | 12 | 10 | 495 | 9 | 454 | 5.90e-114 | 345 |
| MsG0880046337.01.T01 | MTR_2g061820 | 39.959 | 493 | 260 | 11 | 1 | 487 | 4 | 466 | 3.30e-111 | 340 |
| MsG0880046337.01.T01 | MTR_2g076990 | 43.256 | 430 | 198 | 9 | 61 | 481 | 1 | 393 | 4.56e-110 | 334 |
| MsG0880046337.01.T01 | MTR_8g076920 | 36.614 | 508 | 277 | 8 | 4 | 496 | 23 | 500 | 1.87e-105 | 324 |
| MsG0880046337.01.T01 | MTR_5g020990 | 34.375 | 480 | 265 | 10 | 5 | 465 | 25 | 473 | 9.63e-89 | 281 |
| MsG0880046337.01.T01 | MTR_3g103150 | 42.903 | 310 | 135 | 5 | 156 | 461 | 4 | 275 | 2.94e-79 | 249 |
| MsG0880046337.01.T01 | MTR_3g092060 | 29.945 | 541 | 266 | 16 | 4 | 491 | 2 | 482 | 2.29e-66 | 223 |
| MsG0880046337.01.T01 | MTR_7g117950 | 31.765 | 425 | 224 | 10 | 41 | 461 | 42 | 404 | 4.46e-65 | 218 |
| MsG0880046337.01.T01 | MTR_5g021020 | 35.890 | 326 | 153 | 9 | 140 | 463 | 135 | 406 | 8.40e-53 | 184 |
| MsG0880046337.01.T01 | MTR_8g027200 | 28.817 | 465 | 237 | 13 | 30 | 475 | 29 | 418 | 1.45e-50 | 179 |
| MsG0880046337.01.T01 | MTR_1g011680 | 51.807 | 166 | 78 | 1 | 333 | 496 | 3 | 168 | 5.85e-45 | 156 |
| MsG0880046337.01.T01 | MTR_5g021000 | 47.200 | 125 | 61 | 2 | 357 | 479 | 1 | 122 | 4.95e-31 | 118 |
| MsG0880046337.01.T01 | MTR_5g020720 | 39.326 | 178 | 79 | 5 | 263 | 438 | 26 | 176 | 7.77e-27 | 107 |
| MsG0880046337.01.T01 | MTR_1g113750 | 47.368 | 95 | 50 | 0 | 390 | 484 | 16 | 110 | 4.44e-20 | 86.7 |
| MsG0880046337.01.T01 | MTR_5g021010 | 46.667 | 90 | 43 | 2 | 374 | 461 | 34 | 120 | 5.56e-18 | 80.5 |
| MsG0880046337.01.T01 | MTR_2g076820 | 52.174 | 69 | 30 | 1 | 390 | 458 | 1 | 66 | 9.10e-16 | 72.8 |
| MsG0880046337.01.T01 | MTR_7g010800 | 28.372 | 215 | 122 | 8 | 202 | 410 | 206 | 394 | 1.29e-12 | 70.9 |
| MsG0880046337.01.T01 | MTR_4g094662 | 28.505 | 214 | 121 | 8 | 203 | 410 | 230 | 417 | 1.76e-12 | 70.5 |
| MsG0880046337.01.T01 | MTR_2g438140 | 28.037 | 214 | 122 | 8 | 203 | 410 | 227 | 414 | 4.66e-12 | 68.9 |
| MsG0880046337.01.T01 | MTR_2g438140 | 28.037 | 214 | 122 | 8 | 203 | 410 | 287 | 474 | 6.55e-12 | 68.6 |
| MsG0880046337.01.T01 | MTR_2g101290 | 29.630 | 189 | 104 | 5 | 218 | 403 | 430 | 592 | 1.55e-11 | 67.4 |
| MsG0880046337.01.T01 | MTR_2g101290 | 29.630 | 189 | 104 | 5 | 218 | 403 | 430 | 592 | 2.08e-11 | 67.0 |
| MsG0880046337.01.T01 | MTR_4g094270 | 27.919 | 197 | 114 | 6 | 202 | 395 | 156 | 327 | 4.98e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046337.01.T01 | AT5G40010 | 57.759 | 464 | 183 | 4 | 1 | 458 | 4 | 460 | 0.0 | 562 |
| MsG0880046337.01.T01 | AT3G28580 | 57.634 | 465 | 177 | 7 | 1 | 458 | 4 | 455 | 0.0 | 530 |
| MsG0880046337.01.T01 | AT3G28510 | 54.212 | 463 | 203 | 3 | 4 | 465 | 7 | 461 | 3.51e-176 | 506 |
| MsG0880046337.01.T01 | AT3G28540 | 54.746 | 453 | 195 | 3 | 9 | 460 | 12 | 455 | 1.29e-173 | 499 |
| MsG0880046337.01.T01 | AT3G28540 | 54.746 | 453 | 195 | 3 | 9 | 460 | 12 | 455 | 1.67e-173 | 499 |
| MsG0880046337.01.T01 | AT3G28580 | 54.095 | 464 | 173 | 7 | 1 | 458 | 4 | 433 | 1.90e-169 | 487 |
| MsG0880046337.01.T01 | AT3G28600 | 52.101 | 476 | 185 | 7 | 4 | 465 | 3 | 449 | 4.34e-166 | 479 |
| MsG0880046337.01.T01 | AT3G28610 | 49.507 | 507 | 197 | 9 | 4 | 491 | 2 | 468 | 2.45e-164 | 474 |
| MsG0880046337.01.T01 | AT5G40000 | 48.381 | 494 | 201 | 11 | 1 | 473 | 4 | 464 | 1.45e-154 | 449 |
| MsG0880046337.01.T01 | AT3G28520 | 50.881 | 454 | 206 | 4 | 12 | 461 | 1 | 441 | 1.36e-152 | 444 |
| MsG0880046337.01.T01 | AT3G28600 | 48.739 | 476 | 162 | 6 | 4 | 465 | 3 | 410 | 4.87e-149 | 434 |
| MsG0880046337.01.T01 | AT3G28570 | 47.639 | 466 | 194 | 6 | 6 | 461 | 7 | 432 | 6.95e-146 | 426 |
| MsG0880046337.01.T01 | AT3G28570 | 47.639 | 466 | 194 | 6 | 6 | 461 | 14 | 439 | 9.18e-146 | 426 |
| MsG0880046337.01.T01 | AT5G57480 | 42.474 | 485 | 248 | 10 | 1 | 470 | 1 | 469 | 6.45e-122 | 367 |
| MsG0880046337.01.T01 | AT3G50940 | 42.257 | 452 | 217 | 8 | 20 | 465 | 31 | 444 | 3.44e-121 | 363 |
| MsG0880046337.01.T01 | AT4G25835 | 42.794 | 451 | 232 | 8 | 1 | 442 | 1 | 434 | 6.32e-121 | 364 |
| MsG0880046337.01.T01 | AT3G50930 | 41.434 | 502 | 258 | 9 | 16 | 511 | 73 | 544 | 3.01e-120 | 365 |
| MsG0880046337.01.T01 | AT4G30250 | 41.393 | 488 | 256 | 9 | 1 | 475 | 1 | 471 | 4.89e-112 | 342 |
| MsG0880046337.01.T01 | AT4G30250 | 41.393 | 488 | 256 | 9 | 1 | 475 | 3 | 473 | 6.36e-112 | 342 |
| MsG0880046337.01.T01 | AT2G18193 | 39.425 | 487 | 251 | 11 | 10 | 489 | 19 | 468 | 5.28e-109 | 333 |
| MsG0880046337.01.T01 | AT5G17760 | 39.909 | 441 | 209 | 7 | 64 | 484 | 72 | 476 | 7.46e-103 | 318 |
| MsG0880046337.01.T01 | AT2G18190 | 38.085 | 470 | 253 | 8 | 2 | 467 | 13 | 448 | 5.51e-102 | 315 |
| MsG0880046337.01.T01 | AT5G17740 | 36.276 | 521 | 274 | 9 | 4 | 510 | 13 | 489 | 2.85e-101 | 315 |
| MsG0880046337.01.T01 | AT4G05380 | 37.179 | 468 | 245 | 11 | 10 | 465 | 20 | 450 | 2.00e-98 | 305 |
| MsG0880046337.01.T01 | AT5G17730 | 38.983 | 413 | 207 | 7 | 64 | 467 | 72 | 448 | 4.26e-96 | 299 |
| MsG0880046337.01.T01 | AT1G43910 | 37.527 | 461 | 250 | 10 | 16 | 468 | 26 | 456 | 1.78e-92 | 290 |
| MsG0880046337.01.T01 | AT5G17750 | 37.182 | 433 | 208 | 8 | 4 | 427 | 13 | 390 | 5.14e-91 | 283 |
| MsG0880046337.01.T01 | AT2G46620 | 32.334 | 467 | 258 | 8 | 1 | 461 | 1 | 415 | 1.35e-74 | 244 |
| MsG0880046337.01.T01 | AT5G17760 | 39.179 | 268 | 139 | 2 | 64 | 316 | 72 | 330 | 1.48e-57 | 195 |
| MsG0880046337.01.T01 | AT3G28560 | 41.395 | 215 | 116 | 3 | 4 | 215 | 7 | 214 | 2.33e-51 | 176 |
| MsG0880046337.01.T01 | AT3G29800 | 30.890 | 382 | 198 | 10 | 104 | 479 | 76 | 397 | 7.94e-47 | 169 |
| MsG0880046337.01.T01 | AT4G05340 | 48.889 | 90 | 38 | 1 | 333 | 414 | 4 | 93 | 3.74e-20 | 85.9 |
| MsG0880046337.01.T01 | AT5G15250 | 28.079 | 203 | 118 | 7 | 203 | 403 | 222 | 398 | 4.51e-12 | 68.9 |
| MsG0880046337.01.T01 | AT2G30950 | 28.037 | 214 | 122 | 8 | 203 | 410 | 225 | 412 | 6.54e-12 | 68.6 |
| MsG0880046337.01.T01 | AT2G30950 | 28.037 | 214 | 122 | 8 | 203 | 410 | 225 | 412 | 6.54e-12 | 68.6 |
| MsG0880046337.01.T01 | AT2G30950 | 28.037 | 214 | 122 | 8 | 203 | 410 | 225 | 412 | 6.54e-12 | 68.6 |
| MsG0880046337.01.T01 | AT2G30950 | 28.037 | 214 | 122 | 8 | 203 | 410 | 229 | 416 | 7.10e-12 | 68.6 |
| MsG0880046337.01.T01 | AT5G15250 | 28.866 | 194 | 110 | 7 | 203 | 394 | 222 | 389 | 1.70e-11 | 67.0 |
| MsG0880046337.01.T01 | AT1G06430 | 27.586 | 203 | 119 | 7 | 203 | 403 | 218 | 394 | 2.00e-11 | 67.0 |
| MsG0880046337.01.T01 | AT1G06430 | 27.586 | 203 | 119 | 7 | 203 | 403 | 218 | 394 | 2.00e-11 | 67.0 |
| MsG0880046337.01.T01 | AT1G06430 | 27.586 | 203 | 119 | 7 | 203 | 403 | 218 | 394 | 2.00e-11 | 67.0 |
| MsG0880046337.01.T01 | AT5G20000 | 27.919 | 197 | 114 | 6 | 202 | 395 | 158 | 329 | 6.16e-11 | 64.7 |
| MsG0880046337.01.T01 | AT5G19990 | 27.919 | 197 | 114 | 6 | 202 | 395 | 158 | 329 | 6.32e-11 | 64.7 |
| MsG0880046337.01.T01 | AT5G19990 | 27.919 | 197 | 114 | 6 | 202 | 395 | 158 | 329 | 6.32e-11 | 64.7 |
| MsG0880046337.01.T01 | AT5G19990 | 27.919 | 197 | 114 | 6 | 202 | 395 | 100 | 271 | 6.82e-11 | 64.3 |
Find 87 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGCAAAGTGACACTTTC+AGG | 0.150044 | 8:-72170516 | MsG0880046337.01.T01:CDS |
| TTCTCTTGTTCTTGATAATA+AGG | 0.164408 | 8:+72171161 | None:intergenic |
| TACAATAACAGGTTCATATT+TGG | 0.168811 | 8:-72171099 | MsG0880046337.01.T01:CDS |
| AAAGAGTAGTGGTTTAATTA+AGG | 0.254123 | 8:-72170139 | MsG0880046337.01.T01:CDS |
| GAAAGAGATTATTGAAGATT+TGG | 0.268353 | 8:-72170907 | MsG0880046337.01.T01:CDS |
| GATTGTTCACTTGATCTTAC+AGG | 0.280503 | 8:-72170651 | MsG0880046337.01.T01:CDS |
| TGAATTTCATTGATGGAATA+TGG | 0.281171 | 8:-72170488 | MsG0880046337.01.T01:CDS |
| TAGCAAGTTTCATGTTCATT+TGG | 0.286672 | 8:-72171514 | MsG0880046337.01.T01:CDS |
| GTTGGTCCTATTAAGGAAAA+TGG | 0.291304 | 8:-72170093 | MsG0880046337.01.T01:CDS |
| TGCTGCTATGGCTAATTTGT+TGG | 0.293246 | 8:-72170781 | MsG0880046337.01.T01:CDS |
| GAGAATATTGAGAAGCTAAT+TGG | 0.294643 | 8:-72170288 | MsG0880046337.01.T01:CDS |
| ATAAAGGTGTCAAGGTTTAT+TGG | 0.304406 | 8:-72171220 | MsG0880046337.01.T01:CDS |
| GGAACATGTTGGTCCTATTA+AGG | 0.313426 | 8:-72170100 | MsG0880046337.01.T01:CDS |
| ATAATCTCTTTCTTCTTCTC+AGG | 0.331857 | 8:+72170918 | None:intergenic |
| ATCTCATTCCATGAATTCTT+AGG | 0.343436 | 8:-72171398 | MsG0880046337.01.T01:CDS |
| AGCAAGTTTCATGTTCATTT+GGG | 0.345653 | 8:-72171513 | MsG0880046337.01.T01:CDS |
| TTCTTGCTAATAATTACTTA+AGG | 0.348071 | 8:-72170332 | MsG0880046337.01.T01:CDS |
| TGATGATGAGAATGAAAATA+AGG | 0.348942 | 8:-72170592 | MsG0880046337.01.T01:CDS |
| TAAAGGTGTCAAGGTTTATT+GGG | 0.349534 | 8:-72171219 | MsG0880046337.01.T01:CDS |
| GTCTGTCACCTAAGAATTCA+TGG | 0.358843 | 8:+72171390 | None:intergenic |
| TCTTGCTAATAATTACTTAA+GGG | 0.366181 | 8:-72170331 | MsG0880046337.01.T01:CDS |
| AGCTTGATCCTGCACTTATA+AGG | 0.377934 | 8:-72170413 | MsG0880046337.01.T01:CDS |
| GCCATTGTTTCAAAAGTTGC+AGG | 0.380424 | 8:+72170948 | None:intergenic |
| GGGCTATGATGTTTATGATT+TGG | 0.381408 | 8:-72170760 | MsG0880046337.01.T01:CDS |
| GGGCTATTGAATTTCATTGA+TGG | 0.383780 | 8:-72170495 | MsG0880046337.01.T01:CDS |
| GCTGCTATGGCTAATTTGTT+GGG | 0.393298 | 8:-72170780 | MsG0880046337.01.T01:CDS |
| CACATAGTTTGCTTATAGCT+TGG | 0.413731 | 8:+72170993 | None:intergenic |
| CTCAAAAGAAGTGATGCTTA+TGG | 0.418223 | 8:-72171368 | MsG0880046337.01.T01:CDS |
| ATCAACAATGATTGCTGCTA+TGG | 0.421593 | 8:-72170793 | MsG0880046337.01.T01:CDS |
| AGGTGAAGGAAGAAGGAAGT+GGG | 0.424613 | 8:-72170545 | MsG0880046337.01.T01:CDS |
| AGGAAGGAGGTGAAGGAAGA+AGG | 0.430248 | 8:-72170552 | MsG0880046337.01.T01:CDS |
| TTTCAAAGAAACGTAGAAGT+TGG | 0.437255 | 8:+72171465 | None:intergenic |
| AAGAGACTCAAAGCTGAGAT+TGG | 0.441694 | 8:-72171302 | MsG0880046337.01.T01:CDS |
| TGGAATGAGATTCTTATGTA+AGG | 0.443190 | 8:+72171410 | None:intergenic |
| AAGTATAGAGATACAATAAC+AGG | 0.445450 | 8:-72171110 | MsG0880046337.01.T01:CDS |
| AGAGTAACTGATGATTATAA+AGG | 0.449383 | 8:-72171236 | MsG0880046337.01.T01:CDS |
| AATTGGAAAAGCTTGGAAAA+GGG | 0.451620 | 8:-72170850 | MsG0880046337.01.T01:CDS |
| ATGCTAGAATTGGAAAAGCT+TGG | 0.456038 | 8:-72170857 | MsG0880046337.01.T01:CDS |
| TTGGATCATGTGATGAAAGA+AGG | 0.464493 | 8:-72171080 | MsG0880046337.01.T01:CDS |
| GAATTGGAAAAGCTTGGAAA+AGG | 0.468849 | 8:-72170851 | MsG0880046337.01.T01:CDS |
| GAGGTGAAGGAAGAAGGAAG+TGG | 0.470118 | 8:-72170546 | MsG0880046337.01.T01:CDS |
| AAGGAAAATGGTGAGGTTGT+TGG | 0.472585 | 8:-72170081 | MsG0880046337.01.T01:CDS |
| GTGAAGGAAGAAGGAAGTGG+GGG | 0.488319 | 8:-72170543 | MsG0880046337.01.T01:CDS |
| ACTGAAATGTGGACAACAAT+GGG | 0.488365 | 8:-72171545 | MsG0880046337.01.T01:CDS |
| TGGAAAAGATAGCACCAACT+TGG | 0.490393 | 8:-72171282 | MsG0880046337.01.T01:CDS |
| CAAACAGTCCTGGTTACAAA+TGG | 0.491886 | 8:-72171016 | MsG0880046337.01.T01:CDS |
| TGGATCATGTGATGAAAGAA+GGG | 0.494339 | 8:-72171079 | MsG0880046337.01.T01:CDS |
| TACTCTTTCATATTCATCCA+TGG | 0.501783 | 8:+72171253 | None:intergenic |
| AAAATACAGTCACAGAATCA+TGG | 0.502989 | 8:-72171444 | MsG0880046337.01.T01:CDS |
| ATTGTTGATTTACCAGTACC+TGG | 0.512918 | 8:+72170807 | None:intergenic |
| ATTGGAAAAGCTTGGAAAAG+GGG | 0.514100 | 8:-72170849 | MsG0880046337.01.T01:CDS |
| TGCTGTGAGGAAGGAGGTGA+AGG | 0.515156 | 8:-72170559 | MsG0880046337.01.T01:CDS |
| CTACCCCTCCTTATAAGTGC+AGG | 0.519905 | 8:+72170405 | None:intergenic |
| ACTTATAAGGAGGGGTAGAA+TGG | 0.522112 | 8:-72170400 | MsG0880046337.01.T01:CDS |
| AAGGGAAAGAGATTCGTTTG+AGG | 0.523702 | 8:-72171061 | MsG0880046337.01.T01:CDS |
| AAGAAACGTAGAAGTTGGTA+TGG | 0.524293 | 8:+72171470 | None:intergenic |
| GGTGAAGGAAGAAGGAAGTG+GGG | 0.528598 | 8:-72170544 | MsG0880046337.01.T01:CDS |
| AGATTCTCAGCAACATCAGC+AGG | 0.533263 | 8:+72170249 | None:intergenic |
| TAAGGAACAAGATGAGGAAG+TGG | 0.537409 | 8:-72170121 | MsG0880046337.01.T01:CDS |
| GCATCATCCATTGGAGACTT+AGG | 0.537455 | 8:+72170222 | None:intergenic |
| TTTAATTAAGGAACAAGATG+AGG | 0.541321 | 8:-72170127 | MsG0880046337.01.T01:CDS |
| CACTTATCAGCATCATCCAT+TGG | 0.541958 | 8:+72170213 | None:intergenic |
| CACTTGATCTTACAGGTCAA+AGG | 0.546145 | 8:-72170644 | MsG0880046337.01.T01:CDS |
| ATAGCAAAGTGACACTTTCA+GGG | 0.551851 | 8:-72170515 | MsG0880046337.01.T01:CDS |
| ATCCATGGTTAAAACCAAGT+TGG | 0.556634 | 8:+72171268 | None:intergenic |
| TAGCTTGGCCATTTGTAACC+AGG | 0.556681 | 8:+72171008 | None:intergenic |
| TTGTTCTTGATAATAAGGCA+TGG | 0.568698 | 8:+72171166 | None:intergenic |
| TTTGGAGTTAACAGCAGTGA+AGG | 0.569744 | 8:-72170742 | MsG0880046337.01.T01:CDS |
| TCTTATGCCTAAGTCTCCAA+TGG | 0.574824 | 8:-72170229 | MsG0880046337.01.T01:CDS |
| AATGAACATGAAACTTGCTA+AGG | 0.578436 | 8:+72171517 | None:intergenic |
| TGATCCTGCACTTATAAGGA+GGG | 0.596373 | 8:-72170409 | MsG0880046337.01.T01:CDS |
| CCTACAAAATGACTGAAATG+TGG | 0.596609 | 8:-72171556 | None:intergenic |
| TGATGATTATAAAGGTGTCA+AGG | 0.596926 | 8:-72171228 | MsG0880046337.01.T01:CDS |
| TTGATCCTGCACTTATAAGG+AGG | 0.600419 | 8:-72170410 | MsG0880046337.01.T01:CDS |
| GACTGAAATGTGGACAACAA+TGG | 0.606751 | 8:-72171546 | MsG0880046337.01.T01:CDS |
| TCCTATTAAGGAAAATGGTG+AGG | 0.608727 | 8:-72170088 | MsG0880046337.01.T01:CDS |
| AAATTGTATACAAACAGTCC+TGG | 0.610851 | 8:-72171026 | MsG0880046337.01.T01:CDS |
| TTCGTTTGAGGAACAGACAG+AGG | 0.628162 | 8:-72171049 | MsG0880046337.01.T01:CDS |
| AAGCAATGAAGCAAATTCAG+AGG | 0.635171 | 8:-72170038 | MsG0880046337.01.T01:CDS |
| GGTCAGCTTGTGGAGGTGAA+AGG | 0.651822 | 8:-72170467 | MsG0880046337.01.T01:CDS |
| GATGAGGAAGTGGAACATGT+TGG | 0.656984 | 8:-72170111 | MsG0880046337.01.T01:CDS |
| TGAAGGATAATACTGAGTTG+AGG | 0.661198 | 8:-72170725 | MsG0880046337.01.T01:CDS |
| GATGGAATATGGTCAGCTTG+TGG | 0.665052 | 8:-72170477 | MsG0880046337.01.T01:CDS |
| GATCCTGCACTTATAAGGAG+GGG | 0.671043 | 8:-72170408 | MsG0880046337.01.T01:CDS |
| CAAGCTATAAGCAAACTATG+TGG | 0.703587 | 8:-72170992 | MsG0880046337.01.T01:CDS |
| GGAATATGGTCAGCTTGTGG+AGG | 0.710003 | 8:-72170474 | MsG0880046337.01.T01:CDS |
| GTTGATTTACCAGTACCTGG+AGG | 0.741136 | 8:+72170810 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTGCTAATAATTACTTAA+GGG | - | Chr8:72171252-72171271 | MsG0880046337.01.T01:CDS | 20.0% |
| !! | TTCTTGCTAATAATTACTTA+AGG | - | Chr8:72171251-72171270 | MsG0880046337.01.T01:CDS | 20.0% |
| !!! | CTTTCTTATTGTAGTTTTAA+TGG | - | Chr8:72171220-72171239 | MsG0880046337.01.T01:CDS | 20.0% |
| ! | AAAGAGTAGTGGTTTAATTA+AGG | - | Chr8:72171444-72171463 | MsG0880046337.01.T01:CDS | 25.0% |
| ! | AAGTATAGAGATACAATAAC+AGG | - | Chr8:72170473-72170492 | MsG0880046337.01.T01:CDS | 25.0% |
| ! | AGAGTAACTGATGATTATAA+AGG | - | Chr8:72170347-72170366 | MsG0880046337.01.T01:CDS | 25.0% |
| ! | GAAAGAGATTATTGAAGATT+TGG | - | Chr8:72170676-72170695 | MsG0880046337.01.T01:CDS | 25.0% |
| ! | TACAATAACAGGTTCATATT+TGG | - | Chr8:72170484-72170503 | MsG0880046337.01.T01:CDS | 25.0% |
| ! | TGAATTTCATTGATGGAATA+TGG | - | Chr8:72171095-72171114 | MsG0880046337.01.T01:CDS | 25.0% |
| ! | TTTAATTAAGGAACAAGATG+AGG | - | Chr8:72171456-72171475 | MsG0880046337.01.T01:CDS | 25.0% |
| !! | AAGGATTTTTATGCTAGAAT+TGG | - | Chr8:72170716-72170735 | MsG0880046337.01.T01:CDS | 25.0% |
| !! | TGATGATGAGAATGAAAATA+AGG | - | Chr8:72170991-72171010 | MsG0880046337.01.T01:CDS | 25.0% |
| !! | TGTTTTCACAACAAATTATG+TGG | - | Chr8:72171144-72171163 | MsG0880046337.01.T01:CDS | 25.0% |
| !! | TTCTCTTGTTCTTGATAATA+AGG | + | Chr8:72170425-72170444 | None:intergenic | 25.0% |
| !!! | AAAAGGGGTTATTTACTTTT+TGG | - | Chr8:72170749-72170768 | MsG0880046337.01.T01:CDS | 25.0% |
| !!! | GGTTACTTTTAGTAAAAGTA+AGG | - | Chr8:72170697-72170716 | MsG0880046337.01.T01:CDS | 25.0% |
| AAAATACAGTCACAGAATCA+TGG | - | Chr8:72170139-72170158 | MsG0880046337.01.T01:CDS | 30.0% | |
| AAATTGTATACAAACAGTCC+TGG | - | Chr8:72170557-72170576 | MsG0880046337.01.T01:CDS | 30.0% | |
| AATTGGAAAAGCTTGGAAAA+GGG | - | Chr8:72170733-72170752 | MsG0880046337.01.T01:CDS | 30.0% | |
| AGCAAGTTTCATGTTCATTT+GGG | - | Chr8:72170070-72170089 | MsG0880046337.01.T01:CDS | 30.0% | |
| ATAATCTCTTTCTTCTTCTC+AGG | + | Chr8:72170668-72170687 | None:intergenic | 30.0% | |
| ATCTCATTCCATGAATTCTT+AGG | - | Chr8:72170185-72170204 | MsG0880046337.01.T01:CDS | 30.0% | |
| GAGAATATTGAGAAGCTAAT+TGG | - | Chr8:72171295-72171314 | MsG0880046337.01.T01:CDS | 30.0% | |
| TACTCTTTCATATTCATCCA+TGG | + | Chr8:72170333-72170352 | None:intergenic | 30.0% | |
| TAGCAAGTTTCATGTTCATT+TGG | - | Chr8:72170069-72170088 | MsG0880046337.01.T01:CDS | 30.0% | |
| TGGAATGAGATTCTTATGTA+AGG | + | Chr8:72170176-72170195 | None:intergenic | 30.0% | |
| TTTCAAAGAAACGTAGAAGT+TGG | + | Chr8:72170121-72170140 | None:intergenic | 30.0% | |
| ! | TTGTTCTTGATAATAAGGCA+TGG | + | Chr8:72170420-72170439 | None:intergenic | 30.0% |
| !! | AATGAACATGAAACTTGCTA+AGG | + | Chr8:72170069-72170088 | None:intergenic | 30.0% |
| !! | ATAAAGGTGTCAAGGTTTAT+TGG | - | Chr8:72170363-72170382 | MsG0880046337.01.T01:CDS | 30.0% |
| !! | TAAAGGTGTCAAGGTTTATT+GGG | - | Chr8:72170364-72170383 | MsG0880046337.01.T01:CDS | 30.0% |
| !! | TGATGATTATAAAGGTGTCA+AGG | - | Chr8:72170355-72170374 | MsG0880046337.01.T01:CDS | 30.0% |
| !!! | AACTTTTGAAACAATGGCTA+TGG | - | Chr8:72170640-72170659 | MsG0880046337.01.T01:CDS | 30.0% |
| AAGCAATGAAGCAAATTCAG+AGG | - | Chr8:72171545-72171564 | MsG0880046337.01.T01:CDS | 35.0% | |
| AATAGCAAAGTGACACTTTC+AGG | - | Chr8:72171067-72171086 | MsG0880046337.01.T01:CDS | 35.0% | |
| ACAGGTCAAAGGAAGAAAAA+AGG | - | Chr8:72170950-72170969 | MsG0880046337.01.T01:CDS | 35.0% | |
| ACTGAAATGTGGACAACAAT+GGG | - | Chr8:72170038-72170057 | MsG0880046337.01.T01:CDS | 35.0% | |
| ATAGCAAAGTGACACTTTCA+GGG | - | Chr8:72171068-72171087 | MsG0880046337.01.T01:CDS | 35.0% | |
| ATCAACAATGATTGCTGCTA+TGG | - | Chr8:72170790-72170809 | MsG0880046337.01.T01:CDS | 35.0% | |
| ATCCATGGTTAAAACCAAGT+TGG | + | Chr8:72170318-72170337 | None:intergenic | 35.0% | |
| ATGCTAGAATTGGAAAAGCT+TGG | - | Chr8:72170726-72170745 | MsG0880046337.01.T01:CDS | 35.0% | |
| ATTGGAAAAGCTTGGAAAAG+GGG | - | Chr8:72170734-72170753 | MsG0880046337.01.T01:CDS | 35.0% | |
| CAAGCTATAAGCAAACTATG+TGG | - | Chr8:72170591-72170610 | MsG0880046337.01.T01:CDS | 35.0% | |
| CTCAAAAGAAGTGATGCTTA+TGG | - | Chr8:72170215-72170234 | MsG0880046337.01.T01:CDS | 35.0% | |
| GAATTGGAAAAGCTTGGAAA+AGG | - | Chr8:72170732-72170751 | MsG0880046337.01.T01:CDS | 35.0% | |
| GATTGTTCACTTGATCTTAC+AGG | - | Chr8:72170932-72170951 | MsG0880046337.01.T01:CDS | 35.0% | |
| GGGCTATGATGTTTATGATT+TGG | - | Chr8:72170823-72170842 | MsG0880046337.01.T01:CDS | 35.0% | |
| GGGCTATTGAATTTCATTGA+TGG | - | Chr8:72171088-72171107 | MsG0880046337.01.T01:CDS | 35.0% | |
| GTTGGTCCTATTAAGGAAAA+TGG | - | Chr8:72171490-72171509 | MsG0880046337.01.T01:CDS | 35.0% | |
| TCCTATTAAGGAAAATGGTG+AGG | - | Chr8:72171495-72171514 | MsG0880046337.01.T01:CDS | 35.0% | |
| TCTTGCTGATAAAAAAGCTG+AGG | - | Chr8:72171414-72171433 | MsG0880046337.01.T01:CDS | 35.0% | |
| TGAAGGATAATACTGAGTTG+AGG | - | Chr8:72170858-72170877 | MsG0880046337.01.T01:CDS | 35.0% | |
| TGGATCATGTGATGAAAGAA+GGG | - | Chr8:72170504-72170523 | MsG0880046337.01.T01:CDS | 35.0% | |
| TTGGATCATGTGATGAAAGA+AGG | - | Chr8:72170503-72170522 | MsG0880046337.01.T01:CDS | 35.0% | |
| ! | ACCTCACCATTTTCCTTAAT+AGG | + | Chr8:72171499-72171518 | None:intergenic | 35.0% |
| !! | AAGAAACGTAGAAGTTGGTA+TGG | + | Chr8:72170116-72170135 | None:intergenic | 35.0% |
| !! | ATTGTTGATTTACCAGTACC+TGG | + | Chr8:72170779-72170798 | None:intergenic | 35.0% |
| !! | CACATAGTTTGCTTATAGCT+TGG | + | Chr8:72170593-72170612 | None:intergenic | 35.0% |
| !! | TAATTTTGATGCTGTGAGGA+AGG | - | Chr8:72171015-72171034 | MsG0880046337.01.T01:CDS | 35.0% |
| !!! | TATTTACTTTTTGGTCCTCC+AGG | - | Chr8:72170758-72170777 | MsG0880046337.01.T01:CDS | 35.0% |
| !!! | TCCTGCAACTTTTGAAACAA+TGG | - | Chr8:72170634-72170653 | MsG0880046337.01.T01:CDS | 35.0% |
| AAGAGACTCAAAGCTGAGAT+TGG | - | Chr8:72170281-72170300 | MsG0880046337.01.T01:CDS | 40.0% | |
| AAGGAAAATGGTGAGGTTGT+TGG | - | Chr8:72171502-72171521 | MsG0880046337.01.T01:CDS | 40.0% | |
| AAGGGAAAGAGATTCGTTTG+AGG | - | Chr8:72170522-72170541 | MsG0880046337.01.T01:CDS | 40.0% | |
| ACTTATAAGGAGGGGTAGAA+TGG | - | Chr8:72171183-72171202 | MsG0880046337.01.T01:CDS | 40.0% | |
| AGCTTGATCCTGCACTTATA+AGG | - | Chr8:72171170-72171189 | MsG0880046337.01.T01:CDS | 40.0% | |
| CAAACAGTCCTGGTTACAAA+TGG | - | Chr8:72170567-72170586 | MsG0880046337.01.T01:CDS | 40.0% | |
| CACTTATCAGCATCATCCAT+TGG | + | Chr8:72171373-72171392 | None:intergenic | 40.0% | |
| CACTTGATCTTACAGGTCAA+AGG | - | Chr8:72170939-72170958 | MsG0880046337.01.T01:CDS | 40.0% | |
| GACTGAAATGTGGACAACAA+TGG | - | Chr8:72170037-72170056 | MsG0880046337.01.T01:CDS | 40.0% | |
| GCCATTGTTTCAAAAGTTGC+AGG | + | Chr8:72170638-72170657 | None:intergenic | 40.0% | |
| GGAACATGTTGGTCCTATTA+AGG | - | Chr8:72171483-72171502 | MsG0880046337.01.T01:CDS | 40.0% | |
| GTCTGTCACCTAAGAATTCA+TGG | + | Chr8:72170196-72170215 | None:intergenic | 40.0% | |
| TAAGGAACAAGATGAGGAAG+TGG | - | Chr8:72171462-72171481 | MsG0880046337.01.T01:CDS | 40.0% | |
| TCTTATGCCTAAGTCTCCAA+TGG | - | Chr8:72171354-72171373 | MsG0880046337.01.T01:CDS | 40.0% | |
| TGATCCTGCACTTATAAGGA+GGG | - | Chr8:72171174-72171193 | MsG0880046337.01.T01:CDS | 40.0% | |
| TGCTGATAAAAAAGCTGAGG+AGG | - | Chr8:72171417-72171436 | MsG0880046337.01.T01:CDS | 40.0% | |
| TGGAAAAGATAGCACCAACT+TGG | - | Chr8:72170301-72170320 | MsG0880046337.01.T01:CDS | 40.0% | |
| TTGATCCTGCACTTATAAGG+AGG | - | Chr8:72171173-72171192 | MsG0880046337.01.T01:CDS | 40.0% | |
| ! | TGCTGCTATGGCTAATTTGT+TGG | - | Chr8:72170802-72170821 | MsG0880046337.01.T01:CDS | 40.0% |
| ! | TTTGGAGTTAACAGCAGTGA+AGG | - | Chr8:72170841-72170860 | MsG0880046337.01.T01:CDS | 40.0% |
| !! | AGGCTAATTTTGATGCTGTG+AGG | - | Chr8:72171011-72171030 | MsG0880046337.01.T01:CDS | 40.0% |
| !! | GCTGCTATGGCTAATTTGTT+GGG | - | Chr8:72170803-72170822 | MsG0880046337.01.T01:CDS | 40.0% |
| !!! | CACCAACTTGGTTTTAACCA+TGG | - | Chr8:72170313-72170332 | MsG0880046337.01.T01:CDS | 40.0% |
| AGATTCTCAGCAACATCAGC+AGG | + | Chr8:72171337-72171356 | None:intergenic | 45.0% | |
| AGGTGAAGGAAGAAGGAAGT+GGG | - | Chr8:72171038-72171057 | MsG0880046337.01.T01:CDS | 45.0% | |
| GAGGAGGTGAAAAAGAGTAG+TGG | - | Chr8:72171433-72171452 | MsG0880046337.01.T01:CDS | 45.0% | |
| GATCCTGCACTTATAAGGAG+GGG | - | Chr8:72171175-72171194 | MsG0880046337.01.T01:CDS | 45.0% | |
| GATGAGGAAGTGGAACATGT+TGG | - | Chr8:72171472-72171491 | MsG0880046337.01.T01:CDS | 45.0% | |
| GATGGAATATGGTCAGCTTG+TGG | - | Chr8:72171106-72171125 | MsG0880046337.01.T01:CDS | 45.0% | |
| GCATCATCCATTGGAGACTT+AGG | + | Chr8:72171364-72171383 | None:intergenic | 45.0% | |
| TAGCTTGGCCATTTGTAACC+AGG | + | Chr8:72170578-72170597 | None:intergenic | 45.0% | |
| TTCGTTTGAGGAACAGACAG+AGG | - | Chr8:72170534-72170553 | MsG0880046337.01.T01:CDS | 45.0% | |
| ! | GTTGATTTACCAGTACCTGG+AGG | + | Chr8:72170776-72170795 | None:intergenic | 45.0% |
| ! | TTTTGATGCTGTGAGGAAGG+AGG | - | Chr8:72171018-72171037 | MsG0880046337.01.T01:CDS | 45.0% |
| AGGAAGGAGGTGAAGGAAGA+AGG | - | Chr8:72171031-72171050 | MsG0880046337.01.T01:CDS | 50.0% | |
| CTACCCCTCCTTATAAGTGC+AGG | + | Chr8:72171181-72171200 | None:intergenic | 50.0% | |
| GAGGTGAAGGAAGAAGGAAG+TGG | - | Chr8:72171037-72171056 | MsG0880046337.01.T01:CDS | 50.0% | |
| GGAATATGGTCAGCTTGTGG+AGG | - | Chr8:72171109-72171128 | MsG0880046337.01.T01:CDS | 50.0% | |
| GGTGAAGGAAGAAGGAAGTG+GGG | - | Chr8:72171039-72171058 | MsG0880046337.01.T01:CDS | 50.0% | |
| GTGAAGGAAGAAGGAAGTGG+GGG | - | Chr8:72171040-72171059 | MsG0880046337.01.T01:CDS | 50.0% | |
| !! | CTTTTTGGTCCTCCAGGTAC+TGG | - | Chr8:72170764-72170783 | MsG0880046337.01.T01:CDS | 50.0% |
| AAGGAAGAAGGAAGTGGGGG+TGG | - | Chr8:72171043-72171062 | MsG0880046337.01.T01:CDS | 55.0% | |
| AGGAAGAAGGAAGTGGGGGT+GGG | - | Chr8:72171044-72171063 | MsG0880046337.01.T01:CDS | 55.0% | |
| GGTCAGCTTGTGGAGGTGAA+AGG | - | Chr8:72171116-72171135 | MsG0880046337.01.T01:CDS | 55.0% | |
| TGCTGTGAGGAAGGAGGTGA+AGG | - | Chr8:72171024-72171043 | MsG0880046337.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 72170035 | 72171570 | 72170035 | ID=MsG0880046337.01;Name=MsG0880046337.01 |
| Chr8 | mRNA | 72170035 | 72171570 | 72170035 | ID=MsG0880046337.01.T01;Parent=MsG0880046337.01;Name=MsG0880046337.01.T01;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|511 |
| Chr8 | exon | 72170035 | 72171570 | 72170035 | ID=MsG0880046337.01.T01:exon:28377;Parent=MsG0880046337.01.T01 |
| Chr8 | CDS | 72170035 | 72171570 | 72170035 | ID=MsG0880046337.01.T01:cds;Parent=MsG0880046337.01.T01 |
| Gene Sequence |
| Protein sequence |
