AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045103.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045103.01.T01 MTR_7g021090 71.893 338 80 2 4 332 3 334 8.03e-173 488
MsG0880045103.01.T01 MTR_8g039620 71.137 343 86 3 2 332 6 347 3.17e-171 486
MsG0880045103.01.T01 MTR_8g072510 72.222 342 83 4 1 332 1 340 1.92e-167 476
MsG0880045103.01.T01 MTR_1g059930 69.706 340 94 1 8 338 10 349 4.20e-160 457
MsG0880045103.01.T01 MTR_8g062410 69.388 343 86 4 1 332 1 335 1.32e-157 451
MsG0880045103.01.T01 MTR_3g016210 65.730 356 97 5 1 332 1 355 1.61e-154 443
MsG0880045103.01.T01 MTR_8g068990 63.501 337 96 5 8 332 10 331 3.03e-143 415
MsG0880045103.01.T01 MTR_8g073260 60.694 346 123 4 1 336 1 343 1.97e-142 413
MsG0880045103.01.T01 MTR_7g451420 65.916 311 95 3 4 304 3 312 4.92e-138 397
MsG0880045103.01.T01 MTR_8g069880 62.463 341 114 6 6 335 3 340 3.14e-130 382
MsG0880045103.01.T01 MTR_8g040930 63.823 293 93 3 52 332 1 292 7.59e-125 365
MsG0880045103.01.T01 MTR_8g041240 63.823 293 93 3 52 332 1 292 7.59e-125 365
MsG0880045103.01.T01 MTR_8g066670 59.767 343 123 6 1 332 1067 1405 5.04e-122 385
MsG0880045103.01.T01 MTR_8g467780 56.812 345 128 4 8 332 9 352 4.64e-118 351
MsG0880045103.01.T01 MTR_3g105650 52.581 310 132 3 7 301 2 311 1.65e-105 318
MsG0880045103.01.T01 MTR_8g073275 42.778 360 121 8 52 336 1 350 3.19e-74 238
MsG0880045103.01.T01 MTR_1g069110 31.126 302 188 8 10 304 18 306 9.87e-32 125
MsG0880045103.01.T01 MTR_7g099580 27.431 288 167 7 22 304 24 274 1.49e-27 112
MsG0880045103.01.T01 MTR_0127s0030 88.679 53 6 0 332 384 21 73 1.17e-24 97.1
MsG0880045103.01.T01 MTR_4g091710 77.778 63 14 0 332 394 13 75 3.35e-24 97.4
MsG0880045103.01.T01 MTR_7g099570 30.088 226 141 4 10 227 9 225 7.12e-23 100
MsG0880045103.01.T01 MTR_3g463880 82.456 57 10 0 332 388 21 77 1.20e-22 93.6
MsG0880045103.01.T01 MTR_1g057430 81.667 60 11 0 332 391 21 80 1.21e-22 93.2
MsG0880045103.01.T01 MTR_2g101320 30.769 195 120 3 38 229 134 316 1.80e-21 97.1
MsG0880045103.01.T01 MTR_7g117620 26.433 314 180 8 45 325 119 414 8.86e-20 91.7
MsG0880045103.01.T01 MTR_7g022330 80.851 47 9 0 334 380 1 47 2.04e-19 82.0
MsG0880045103.01.T01 MTR_4g046673 75.000 64 16 0 331 394 20 83 2.23e-19 88.2
MsG0880045103.01.T01 MTR_6g045657 86.957 46 6 0 332 377 21 66 3.18e-19 81.6
MsG0880045103.01.T01 MTR_1g115575 24.913 289 173 6 45 301 169 445 2.52e-17 84.3
MsG0880045103.01.T01 MTR_2g101310 29.474 190 123 3 41 229 137 316 3.90e-17 83.6
MsG0880045103.01.T01 MTR_2g101310 29.474 190 123 3 41 229 137 316 4.43e-17 83.2
MsG0880045103.01.T01 MTR_4g062100 25.769 260 161 6 5 256 69 304 5.36e-16 80.1
MsG0880045103.01.T01 MTR_4g033005 87.500 40 5 0 332 371 21 60 1.42e-15 71.6
MsG0880045103.01.T01 MTR_2g096190 23.724 333 200 9 5 300 65 380 2.02e-14 75.1
MsG0880045103.01.T01 MTR_2g038180 57.143 63 27 0 332 394 21 83 5.08e-14 67.4
MsG0880045103.01.T01 MTR_8g105260 27.317 205 129 5 45 244 101 290 5.10e-14 73.9
MsG0880045103.01.T01 MTR_3g025405 72.500 40 11 0 334 373 1 40 3.24e-13 65.9
MsG0880045103.01.T01 MTR_6g027840 28.934 197 126 8 45 231 246 438 3.93e-13 71.2
MsG0880045103.01.T01 MTR_7g100390 23.875 289 174 6 45 300 87 362 2.06e-12 68.9
MsG0880045103.01.T01 MTR_2g033050 27.841 176 115 4 61 232 217 384 4.52e-12 67.4
MsG0880045103.01.T01 MTR_4g051502 81.081 37 7 0 332 368 21 57 4.80e-12 65.1
MsG0880045103.01.T01 MTR_7g100430 21.189 387 223 11 5 316 67 446 6.31e-12 67.4
MsG0880045103.01.T01 MTR_3g008080 60.000 55 22 0 334 388 1 55 8.91e-12 60.5
MsG0880045103.01.T01 MTR_3g069560 56.140 57 25 0 332 388 21 77 1.82e-11 61.6
MsG0880045103.01.T01 MTR_2g096760 25.676 222 133 8 5 210 10 215 2.91e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045103.01.T01 AT4G10720 41.867 332 156 4 7 311 2 323 4.38e-82 257
MsG0880045103.01.T01 AT4G10720 41.867 332 156 4 7 311 2 323 7.87e-82 258
MsG0880045103.01.T01 AT1G14500 37.500 320 182 4 7 308 2 321 8.17e-70 226
MsG0880045103.01.T01 AT5G15500 41.083 314 167 6 7 302 2 315 1.00e-69 226
MsG0880045103.01.T01 AT1G14480 37.798 336 186 5 7 321 2 335 4.12e-67 219
MsG0880045103.01.T01 AT5G54620 40.260 308 168 3 7 298 2 309 3.59e-66 217
MsG0880045103.01.T01 AT5G54610 36.422 313 165 6 7 295 2 304 9.99e-61 202
MsG0880045103.01.T01 AT1G14480 33.229 319 181 5 7 321 2 292 1.17e-48 170
MsG0880045103.01.T01 AT5G15500 36.058 208 116 5 112 302 2 209 1.59e-29 117
MsG0880045103.01.T01 AT5G51160 29.562 274 156 5 64 307 35 301 3.45e-29 118
MsG0880045103.01.T01 AT4G03500 25.246 305 162 8 44 301 194 479 9.80e-20 91.7
MsG0880045103.01.T01 AT4G03500 25.246 305 162 8 44 301 194 479 9.80e-20 91.7
MsG0880045103.01.T01 AT4G03500 25.246 305 162 8 44 301 217 502 1.18e-19 91.7
MsG0880045103.01.T01 AT1G34050 24.913 289 165 7 66 319 174 445 6.08e-18 86.3
MsG0880045103.01.T01 AT1G05640 26.042 288 168 7 45 300 191 465 1.75e-17 84.7
MsG0880045103.01.T01 AT3G09550 25.000 348 200 12 10 320 154 477 7.35e-16 79.7
MsG0880045103.01.T01 AT3G09550 25.000 348 200 12 10 320 147 470 7.70e-16 79.7
MsG0880045103.01.T01 AT3G09550 25.000 348 200 12 10 320 147 470 7.70e-16 79.7
MsG0880045103.01.T01 AT5G54700 29.327 208 120 6 102 306 23 206 1.13e-15 78.2
MsG0880045103.01.T01 AT1G07710 23.164 354 225 7 5 325 65 404 2.05e-15 78.2
MsG0880045103.01.T01 AT1G07710 23.164 354 225 7 5 325 65 404 2.05e-15 78.2
MsG0880045103.01.T01 AT3G12360 23.875 289 176 6 45 301 167 443 8.57e-15 76.6
MsG0880045103.01.T01 AT2G31820 25.000 288 171 8 45 300 227 501 9.36e-15 76.6
MsG0880045103.01.T01 AT3G12360 23.875 289 176 6 45 301 155 431 1.01e-14 76.3
MsG0880045103.01.T01 AT4G03460 29.577 213 122 5 101 301 290 486 2.47e-14 75.1
MsG0880045103.01.T01 AT4G03460 29.577 213 122 5 101 301 258 454 2.75e-14 75.1
MsG0880045103.01.T01 AT2G01680 26.238 202 135 3 45 244 97 286 3.29e-14 74.7
MsG0880045103.01.T01 AT1G03670 30.531 226 111 7 102 307 279 478 6.37e-14 73.9
MsG0880045103.01.T01 AT4G03480 24.465 327 183 10 10 321 360 637 7.28e-14 73.6
MsG0880045103.01.T01 AT4G03480 24.465 327 183 10 10 321 357 634 7.79e-14 73.6
MsG0880045103.01.T01 AT5G02620 22.881 236 168 3 5 239 55 277 2.18e-13 72.0
MsG0880045103.01.T01 AT5G02620 22.881 236 168 3 5 239 55 277 2.18e-13 72.0
MsG0880045103.01.T01 AT5G02620 22.881 236 168 3 5 239 55 277 2.18e-13 72.0
MsG0880045103.01.T01 AT5G60070 21.791 335 205 9 6 300 73 390 3.32e-13 71.6
MsG0880045103.01.T01 AT4G03450 23.404 329 181 9 10 316 227 506 1.30e-12 69.7
MsG0880045103.01.T01 AT4G03450 23.404 329 181 9 10 316 227 506 2.09e-12 69.3
MsG0880045103.01.T01 AT1G10340 23.856 306 142 7 44 304 169 428 3.84e-12 68.2
MsG0880045103.01.T01 AT1G10340 23.856 306 142 7 44 304 173 432 4.00e-12 68.2
MsG0880045103.01.T01 AT5G50140 25.854 205 126 5 41 229 26 220 4.72e-12 67.8
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G05040 25.287 261 180 4 46 302 277 526 4.35e-11 65.1
MsG0880045103.01.T01 AT4G14390 24.818 274 180 6 42 302 264 524 8.65e-11 64.3
MsG0880045103.01.T01 AT5G02620 22.780 259 163 4 5 239 55 300 9.90e-11 63.9
MsG0880045103.01.T01 AT5G02620 22.780 259 163 4 5 239 55 300 9.90e-11 63.9

Find 85 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGATCTTGTTAGAGTTAA+AGG 0.117136 8:-54282095 MsG0880045103.01.T01:CDS
GCCAGCTAACAAGTACTTTA+AGG 0.142664 8:+54281916 None:intergenic
TCAAGATGATCCATCCATTT+TGG 0.183666 8:-54282315 MsG0880045103.01.T01:CDS
GTAATATGTCAACTTATTTA+AGG 0.200563 8:-54279984 MsG0880045103.01.T01:CDS
TTTACATATTGCTGCATCTA+TGG 0.203638 8:-54282258 MsG0880045103.01.T01:CDS
ACCGATTTCCCAACATTTCT+TGG 0.210830 8:+54279790 None:intergenic
GCACAAGACAATGGCACTTC+TGG 0.294478 8:+54277223 None:intergenic
TGACATATTACCTCTAATTC+TGG 0.294950 8:+54279996 None:intergenic
GGCGCTCAAAAGCTGGAAAA+TGG 0.305181 8:-54281873 MsG0880045103.01.T01:CDS
GGATGGGGCTGGATCCTTGC+GGG 0.330635 8:+54282174 None:intergenic
TAAATCTATACGCTCCAAAA+TGG 0.335742 8:+54282301 None:intergenic
CAGCGCAGTCTCACCTCTTA+TGG 0.353195 8:+54281971 None:intergenic
TCCAAGAAATGTTGGGAAAT+CGG 0.358425 8:-54279791 MsG0880045103.01.T01:intron
TTCATAATTTCGGTGGCAAA+TGG 0.365858 8:+54282227 None:intergenic
TTACCTGCAGCTCACTCCTT+AGG 0.369288 8:+54281799 None:intergenic
GAAGGGTGAAGGTTCGTTAC+CGG 0.378315 8:-54277288 MsG0880045103.01.T01:CDS
TCATCAAAGACCAGAATTAG+AGG 0.384461 8:-54280006 MsG0880045103.01.T01:CDS
TAGGGCTGAAATATGCAAAA+TGG 0.395625 8:+54281818 None:intergenic
GTGCCATTGTCTTGTGCCTC+GGG 0.395628 8:-54277217 MsG0880045103.01.T01:CDS
ATTGAATACTTGACCATAAG+AGG 0.401389 8:-54281984 MsG0880045103.01.T01:CDS
CTTCTACTCCAAGAAATGTT+GGG 0.407177 8:-54279798 MsG0880045103.01.T01:CDS
CAATCGGTTATCATTATTTG+TGG 0.423782 8:+54282385 None:intergenic
TCTTCTACTCCAAGAAATGT+TGG 0.437937 8:-54279799 MsG0880045103.01.T01:CDS
CCCTTAAAGTACTTGTTAGC+TGG 0.441660 8:-54281917 MsG0880045103.01.T01:CDS
CCAGCTAACAAGTACTTTAA+GGG 0.442710 8:+54281917 None:intergenic
ACGGAGAGGCGCTCAAAAGC+TGG 0.445719 8:-54281880 MsG0880045103.01.T01:CDS
TACCTGCAGCTCACTCCTTA+GGG 0.445883 8:+54281800 None:intergenic
TGTAAAGGAGTTTCAACAAA+TGG 0.448723 8:+54282275 None:intergenic
CTTGAGCTGCAGCTTTCAAT+CGG 0.454866 8:+54282369 None:intergenic
AAAGTATGAGAGAGCTTTGA+AGG 0.458415 8:-54277306 MsG0880045103.01.T01:CDS
TCTAATATACTCTTGATCTC+TGG 0.462110 8:+54280066 None:intergenic
CTTCATTATGCAAGTCAAAT+CGG 0.470508 8:-54282053 MsG0880045103.01.T01:CDS
AGCCCTAAGGAGTGAGCTGC+AGG 0.472202 8:-54281802 MsG0880045103.01.T01:intron
TCATAATTTCGGTGGCAAAT+GGG 0.485094 8:+54282228 None:intergenic
TGGGTTATGGAAGGTAAAGA+TGG 0.486344 8:-54277348 MsG0880045103.01.T01:intron
TTTAGCTTCCATGCAAATGA+AGG 0.490376 8:+54282197 None:intergenic
ATTTAAAACCTTCATTTGCA+TGG 0.492498 8:-54282205 MsG0880045103.01.T01:CDS
TGTACAGGCACTTCAATTGT+TGG 0.493166 8:-54280157 MsG0880045103.01.T01:intron
TTACATATTGCTGCATCTAT+GGG 0.495030 8:-54282257 MsG0880045103.01.T01:CDS
AATCGGTTATCATTATTTGT+GGG 0.501672 8:+54282386 None:intergenic
TCTGGCCTTGTCCACCATCT+CGG 0.504798 8:+54277241 None:intergenic
GCAACTGCGATCTATCAATC+AGG 0.505224 8:-54279901 MsG0880045103.01.T01:CDS
AGTGCCATTGTCTTGTGCCT+CGG 0.515757 8:-54277218 MsG0880045103.01.T01:CDS
TGTTAAGTACGAACAATATG+AGG 0.526462 8:-54281940 MsG0880045103.01.T01:CDS
TCCACTCGTGACATGGTGAC+CGG 0.530767 8:+54277269 None:intergenic
GATCACATCAATGCCGCAGT+TGG 0.539554 8:+54277164 None:intergenic
CATGGAGAGCAAAACAGCAT+TGG 0.540200 8:-54280103 MsG0880045103.01.T01:CDS
TCTATACGCTCCAAAATGGA+TGG 0.544845 8:+54282305 None:intergenic
TTGAAAGCTGCAGCTCAAGC+AGG 0.545828 8:-54282365 MsG0880045103.01.T01:CDS
GGTCTTCTCCACTCGTGACA+TGG 0.546066 8:+54277262 None:intergenic
CATAGCGAGATGGATGGGGC+TGG 0.551606 8:+54282163 None:intergenic
TTTGCATAGCGAGATGGATG+GGG 0.552573 8:+54282159 None:intergenic
GGAATTTATCAGGTTAGTGC+TGG 0.554753 8:-54279862 MsG0880045103.01.T01:CDS
ATAGATGCAGCAATATGTAA+AGG 0.555251 8:+54282260 None:intergenic
GAGAGAGCTTTGAAGGGTGA+AGG 0.555736 8:-54277299 MsG0880045103.01.T01:CDS
TTAAACAAGAGGGACGATGC+AGG 0.562233 8:-54281846 MsG0880045103.01.T01:CDS
GTCAAGTATTCAATAGATCC+CGG 0.563031 8:+54281993 None:intergenic
ATTTGACTTGCATAATGAAG+AGG 0.563135 8:+54282056 None:intergenic
AGTCTTGAGAGAAGTAGCGA+AGG 0.578098 8:-54277189 MsG0880045103.01.T01:CDS
TGGATGGGGCTGGATCCTTG+CGG 0.586497 8:+54282173 None:intergenic
CAGAGGAGAAGCGTAACACT+TGG 0.589311 8:-54279945 MsG0880045103.01.T01:CDS
ATGGAAGGTAAAGATGGAAG+CGG 0.590873 8:-54277342 MsG0880045103.01.T01:intron
CTAACCTGATAAATTCCACC+AGG 0.595881 8:+54279868 None:intergenic
AAATGGAATATTAAACAAGA+GGG 0.596917 8:-54281856 MsG0880045103.01.T01:CDS
CTTGAGCTTATGTGCAAGTG+TGG 0.611285 8:+54280029 None:intergenic
GAAGACCGAGATGGTGGACA+AGG 0.611488 8:-54277246 MsG0880045103.01.T01:CDS
AAATTTGAACTCAATGAACA+TGG 0.614702 8:-54280121 MsG0880045103.01.T01:CDS
AAAATGGAATATTAAACAAG+AGG 0.615959 8:-54281857 MsG0880045103.01.T01:CDS
AGTGGAGAAGACCGAGATGG+TGG 0.620597 8:-54277252 MsG0880045103.01.T01:CDS
CATCTTGAATCACTGTGTAG+AGG 0.625838 8:+54282330 None:intergenic
TGCCATTGTCTTGTGCCTCG+GGG 0.629945 8:-54277216 MsG0880045103.01.T01:CDS
ACCGGTCACCATGTCACGAG+TGG 0.640889 8:-54277270 MsG0880045103.01.T01:CDS
AAGTATGAGAGAGCTTTGAA+GGG 0.647957 8:-54277305 MsG0880045103.01.T01:CDS
ATCCCCGAGGCACAAGACAA+TGG 0.653754 8:+54277214 None:intergenic
GCATGGAAGCTAAACCCGCA+AGG 0.660983 8:-54282188 MsG0880045103.01.T01:CDS
CTCTCAAGACTTTATCCCCG+AGG 0.665402 8:+54277201 None:intergenic
TTGAGCTTATGTGCAAGTGT+GGG 0.673038 8:+54280030 None:intergenic
GTTAGTGCTGGTGATGACAA+TGG 0.676683 8:-54279850 MsG0880045103.01.T01:CDS
ACGAGTGGAGAAGACCGAGA+TGG 0.682235 8:-54277255 MsG0880045103.01.T01:CDS
GATTAGAGCAAATATGACAG+AGG 0.683809 8:-54279962 MsG0880045103.01.T01:CDS
AGTAGCGAAGGAACCAACTG+CGG 0.692659 8:-54277177 MsG0880045103.01.T01:CDS
AACCTGATAAATTCCACCAG+GGG 0.693447 8:+54279870 None:intergenic
TAACCTGATAAATTCCACCA+GGG 0.695982 8:+54279869 None:intergenic
TTATGCAAGTCAAATCGGTG+AGG 0.699723 8:-54282048 MsG0880045103.01.T01:CDS
ACCTGATAAATTCCACCAGG+GGG 0.706697 8:+54279871 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATATGTTTACAATT+TGG + Chr8:54278967-54278986 None:intergenic 10.0%
!! ATTTATAATACACAAAATTA+AGG + Chr8:54280270-54280289 None:intergenic 10.0%
!! GAAAAAAAAGAAATATATAA+AGG + Chr8:54277814-54277833 None:intergenic 10.0%
!! TAAAAGATTAGAAATAATTT+CGG + Chr8:54281040-54281059 None:intergenic 10.0%
!! TGTTATAATATTTATCAAAA+TGG + Chr8:54279190-54279209 None:intergenic 10.0%
!!! ATCAATAAGTTTTTTTTTTA+TGG + Chr8:54280893-54280912 None:intergenic 10.0%
!!! ATTTTTTATGTTACATATTT+TGG + Chr8:54278871-54278890 None:intergenic 10.0%
!!! TTAATTTTGTGTATTATAAA+TGG - Chr8:54280269-54280288 MsG0880045103.01.T01:intron 10.0%
!!! TTAGTTATAAATTTTTTTTG+AGG + Chr8:54281079-54281098 None:intergenic 10.0%
!! AAAAAAATTAGAGATTAAGA+AGG - Chr8:54281396-54281415 MsG0880045103.01.T01:intron 15.0%
!! AAAAAATTAGAGATTAAGAA+GGG - Chr8:54281397-54281416 MsG0880045103.01.T01:intron 15.0%
!! AACAAAATCAACAAATTTAA+AGG - Chr8:54278434-54278453 MsG0880045103.01.T01:intron 15.0%
!! ACTTATGATTTATAAATTAG+TGG + Chr8:54279083-54279102 None:intergenic 15.0%
!! ATTTAAAGGAAATATAGAAT+CGG - Chr8:54278448-54278467 MsG0880045103.01.T01:intron 15.0%
!! ATTTCAGTAAATATCATATT+TGG + Chr8:54277951-54277970 None:intergenic 15.0%
!! CATATAAAATAAATAACTAG+CGG + Chr8:54279928-54279947 None:intergenic 15.0%
!! CATTATTGAAAATGAAATTA+AGG + Chr8:54281950-54281969 None:intergenic 15.0%
!!! AGGTTTTAAATTCATAATTT+CGG + Chr8:54277344-54277363 None:intergenic 15.0%
!!! ATAAACATGGTTTTTATTTT+TGG + Chr8:54278008-54278027 None:intergenic 15.0%
!!! CTAGTTATTTATTTTATATG+TGG - Chr8:54279928-54279947 MsG0880045103.01.T01:CDS 15.0%
!!! TGTGATTTTATTTATTGAAT+AGG + Chr8:54277786-54277805 None:intergenic 15.0%
!!! TTGAAATAATCTTATTTGAT+TGG + Chr8:54278389-54278408 None:intergenic 15.0%
!! AAAAAGAAATAGAAGATGAA+GGG - Chr8:54278223-54278242 MsG0880045103.01.T01:intron 20.0%
!! AAAATGGAATATTAAACAAG+AGG - Chr8:54277701-54277720 MsG0880045103.01.T01:intron 20.0%
!! AAAATTCAAATGTTGTAAAG+AGG - Chr8:54278407-54278426 MsG0880045103.01.T01:intron 20.0%
!! AAATGGAATATTAAACAAGA+GGG - Chr8:54277702-54277721 MsG0880045103.01.T01:intron 20.0%
!! AAATTTATCTGAGCATTTAT+GGG + Chr8:54280065-54280084 None:intergenic 20.0%
!! ATATGTTTACAATTTGGATT+TGG + Chr8:54278961-54278980 None:intergenic 20.0%
!! GTAATATGTCAACTTATTTA+AGG - Chr8:54279574-54279593 MsG0880045103.01.T01:intron 20.0%
!! TAAAAAGAAATAGAAGATGA+AGG - Chr8:54278222-54278241 MsG0880045103.01.T01:intron 20.0%
!! TAAATTTATCTGAGCATTTA+TGG + Chr8:54280066-54280085 None:intergenic 20.0%
!! TACAAATTTGTGAATTATCA+TGG + Chr8:54278358-54278377 None:intergenic 20.0%
!! TGTAAATATGTATTCCTTTA+CGG - Chr8:54279824-54279843 MsG0880045103.01.T01:CDS 20.0%
!! TTAAAGAGTCTAACAAAATT+CGG + Chr8:54280988-54281007 None:intergenic 20.0%
!! TTAAATGAAGTTACTACTAA+GGG + Chr8:54278608-54278627 None:intergenic 20.0%
!! TTCTAACATTCTTTCAAAAA+AGG + Chr8:54280307-54280326 None:intergenic 20.0%
!!! AACTTTTCTATATTCTACAT+TGG + Chr8:54280395-54280414 None:intergenic 20.0%
!!! AAGATTTTAAAAGATTGTAG+CGG - Chr8:54280689-54280708 MsG0880045103.01.T01:intron 20.0%
!!! AGATTTGATTACATGTATTT+TGG + Chr8:54279049-54279068 None:intergenic 20.0%
!!! ATATATTTTATGATACCAAG+GGG - Chr8:54279861-54279880 MsG0880045103.01.T01:CDS 20.0%
!!! CTTCAAACATTTTTTTTTCT+CGG + Chr8:54279157-54279176 None:intergenic 20.0%
!!! GAGATTTTAAAAGACTATTT+TGG - Chr8:54280651-54280670 MsG0880045103.01.T01:intron 20.0%
!!! GATATATTTTATGATACCAA+GGG - Chr8:54279860-54279879 MsG0880045103.01.T01:CDS 20.0%
!!! GTTATTTATTTTATATGTGG+AGG - Chr8:54279931-54279950 MsG0880045103.01.T01:CDS 20.0%
!!! TTTTAAATTCATAATTTCGG+TGG + Chr8:54277341-54277360 None:intergenic 20.0%
! AAAAACGATGAGTAAAATCA+CGG + Chr8:54279979-54279998 None:intergenic 25.0%
! AAAAGAAATAGAAGATGAAG+GGG - Chr8:54278224-54278243 MsG0880045103.01.T01:intron 25.0%
! AAAGATCTTGTTAGAGTTAA+AGG - Chr8:54277463-54277482 MsG0880045103.01.T01:intron 25.0%
! AAAGGATAATCAAGTATCAT+GGG - Chr8:54282164-54282183 MsG0880045103.01.T01:CDS 25.0%
! AAATTTGAACTCAATGAACA+TGG - Chr8:54279437-54279456 MsG0880045103.01.T01:intron 25.0%
! AAGATTAGAAATAATTTCGG+TGG + Chr8:54281037-54281056 None:intergenic 25.0%
! AATCGGTTATCATTATTTGT+GGG + Chr8:54277175-54277194 None:intergenic 25.0%
! AATCTCAAAATGACATATCT+CGG - Chr8:54278048-54278067 MsG0880045103.01.T01:intron 25.0%
! AGTCAATCTCATAAAATCTT+AGG + Chr8:54280811-54280830 None:intergenic 25.0%
! CGAGAAAAAAAAATGTTTGA+AGG - Chr8:54279155-54279174 MsG0880045103.01.T01:intron 25.0%
! CTAGTATTTGATTACGATTA+GGG + Chr8:54278763-54278782 None:intergenic 25.0%
! GTTAAATGAAGTTACTACTA+AGG + Chr8:54278609-54278628 None:intergenic 25.0%
! TAATATAGACCTCTCAAAAT+GGG + Chr8:54281283-54281302 None:intergenic 25.0%
! TAGTATTTGATTACGATTAG+GGG + Chr8:54278762-54278781 None:intergenic 25.0%
! TTAATATAGACCTCTCAAAA+TGG + Chr8:54281284-54281303 None:intergenic 25.0%
!! ATTTAAAACCTTCATTTGCA+TGG - Chr8:54277353-54277372 MsG0880045103.01.T01:intron 25.0%
!! CGATATATTTTATGATACCA+AGG - Chr8:54279859-54279878 MsG0880045103.01.T01:CDS 25.0%
!! GAGCTTTTAATGTTATTGAA+GGG + Chr8:54281312-54281331 None:intergenic 25.0%
!! GGCATTTAATTAAGATTTTC+AGG + Chr8:54281016-54281035 None:intergenic 25.0%
!! TAATGACATCTTTTTCCATA+GGG - Chr8:54278712-54278731 MsG0880045103.01.T01:intron 25.0%
!! TGAGCTTTTAATGTTATTGA+AGG + Chr8:54281313-54281332 None:intergenic 25.0%
!! TGTTTGATATGGATATGTTT+TGG - Chr8:54281189-54281208 MsG0880045103.01.T01:intron 25.0%
!!! AAAAGACGTTTAAGATTTTG+AGG - Chr8:54280737-54280756 MsG0880045103.01.T01:intron 25.0%
!!! AAAGACGTTTAAGATTTTGA+GGG - Chr8:54280738-54280757 MsG0880045103.01.T01:intron 25.0%
!!! ACTGATGTTTTTTCTTTTGA+AGG + Chr8:54278934-54278953 None:intergenic 25.0%
!!! GATTTTGAGATGAGTTTTTT+TGG + Chr8:54278999-54279018 None:intergenic 25.0%
!!! TTCTTTTGAAGGAAGATTTA+CGG + Chr8:54278923-54278942 None:intergenic 25.0%
AAAAGATGTCATTAGGATGA+TGG + Chr8:54278706-54278725 None:intergenic 30.0%
AAATAGAAATTGTCCATCCT+TGG - Chr8:54281256-54281275 MsG0880045103.01.T01:intron 30.0%
AATACTCATAGATTGTACCA+CGG - Chr8:54280495-54280514 MsG0880045103.01.T01:intron 30.0%
AATGAGTAACTTTCATGGTA+TGG - Chr8:54279323-54279342 MsG0880045103.01.T01:intron 30.0%
ACAAAGAAGACATGGTATAT+TGG - Chr8:54280625-54280644 MsG0880045103.01.T01:intron 30.0%
ACATTTGTTCTTCATGTAAG+AGG - Chr8:54281350-54281369 MsG0880045103.01.T01:intron 30.0%
ACTTCCCATTCGTAAAAAAT+CGG - Chr8:54282070-54282089 MsG0880045103.01.T01:CDS 30.0%
AGACATTGTATATGAGACAA+GGG - Chr8:54282139-54282158 MsG0880045103.01.T01:CDS 30.0%
AGTATTTGATTACGATTAGG+GGG + Chr8:54278761-54278780 None:intergenic 30.0%
ATACCATGAAAGTTACTCAT+TGG + Chr8:54279324-54279343 None:intergenic 30.0%
ATAGAATCGGTATAGTTAGA+AGG - Chr8:54278461-54278480 MsG0880045103.01.T01:intron 30.0%
ATAGATGCAGCAATATGTAA+AGG + Chr8:54277301-54277320 None:intergenic 30.0%
ATATATGTCACCTACACTAT+GGG - Chr8:54281574-54281593 MsG0880045103.01.T01:intron 30.0%
ATGACACAGGTTTATAAACA+TGG + Chr8:54278021-54278040 None:intergenic 30.0%
ATGAGTAACTTTCATGGTAT+GGG - Chr8:54279324-54279343 MsG0880045103.01.T01:intron 30.0%
ATGCTCTAATACACTTCTTA+GGG + Chr8:54281886-54281905 None:intergenic 30.0%
ATTGAATACTTGACCATAAG+AGG - Chr8:54277574-54277593 MsG0880045103.01.T01:intron 30.0%
CAAAGGATAATCAAGTATCA+TGG - Chr8:54282163-54282182 MsG0880045103.01.T01:CDS 30.0%
CAATCGGTTATCATTATTTG+TGG + Chr8:54277176-54277195 None:intergenic 30.0%
CCTAATCGTAATCAAATACT+AGG - Chr8:54278761-54278780 MsG0880045103.01.T01:intron 30.0%
CCTAGTATTTGATTACGATT+AGG + Chr8:54278764-54278783 None:intergenic 30.0%
CTATGGAAAAAGATGTCATT+AGG + Chr8:54278713-54278732 None:intergenic 30.0%
CTCAAAAAAAATAAACGGAG+AGG - Chr8:54277664-54277683 MsG0880045103.01.T01:intron 30.0%
CTTCATTATGCAAGTCAAAT+CGG - Chr8:54277505-54277524 MsG0880045103.01.T01:intron 30.0%
GCAAAAAAACCAAAAACGTA+TGG - Chr8:54277417-54277436 MsG0880045103.01.T01:intron 30.0%
GGATGTATTGAATTGAGATT+AGG + Chr8:54281117-54281136 None:intergenic 30.0%
TAAATCTATACGCTCCAAAA+TGG + Chr8:54277260-54277279 None:intergenic 30.0%
TAGACATTGTATATGAGACA+AGG - Chr8:54282138-54282157 MsG0880045103.01.T01:CDS 30.0%
TATATATGTCACCTACACTA+TGG - Chr8:54281573-54281592 MsG0880045103.01.T01:intron 30.0%
TATGCTCTAATACACTTCTT+AGG + Chr8:54281887-54281906 None:intergenic 30.0%
TCTAATATACTCTTGATCTC+TGG + Chr8:54279495-54279514 None:intergenic 30.0%
TCTCATATATAGACAGAAGA+GGG + Chr8:54280588-54280607 None:intergenic 30.0%
TGACATATTACCTCTAATTC+TGG + Chr8:54279565-54279584 None:intergenic 30.0%
TGTAAAGGAGTTTCAACAAA+TGG + Chr8:54277286-54277305 None:intergenic 30.0%
TGTTAAGTACGAACAATATG+AGG - Chr8:54277618-54277637 MsG0880045103.01.T01:intron 30.0%
TGTTCAACTGTCGTAAAAAA+TGG + Chr8:54281468-54281487 None:intergenic 30.0%
TTACATATTGCTGCATCTAT+GGG - Chr8:54277301-54277320 MsG0880045103.01.T01:CDS 30.0%
TTACGACAGTTGAACATTAT+GGG - Chr8:54281472-54281491 MsG0880045103.01.T01:intron 30.0%
TTGTGAAAGTGACACAAAAT+TGG - Chr8:54281987-54282006 MsG0880045103.01.T01:CDS 30.0%
TTTACATATTGCTGCATCTA+TGG - Chr8:54277300-54277319 MsG0880045103.01.T01:CDS 30.0%
TTTACGACAGTTGAACATTA+TGG - Chr8:54281471-54281490 MsG0880045103.01.T01:intron 30.0%
! AAGTGGGATATTGAGATTTT+GGG - Chr8:54282191-54282210 MsG0880045103.01.T01:CDS 30.0%
! AATGACATCTTTTTCCATAG+GGG - Chr8:54278713-54278732 MsG0880045103.01.T01:intron 30.0%
! CTAATGACATCTTTTTCCAT+AGG - Chr8:54278711-54278730 MsG0880045103.01.T01:intron 30.0%
! GCTGGCTCAAAAAAAATAAA+CGG - Chr8:54277659-54277678 MsG0880045103.01.T01:intron 30.0%
! GTGATTTTACTCATCGTTTT+TGG - Chr8:54279978-54279997 MsG0880045103.01.T01:CDS 30.0%
! GTTTTCCTGTGTGTATAAAT+TGG + Chr8:54278136-54278155 None:intergenic 30.0%
! TAAATTTCTCTTTTCGTGTC+CGG - Chr8:54277546-54277565 MsG0880045103.01.T01:intron 30.0%
! TAGTAGGATGTTGTTTGATA+TGG - Chr8:54281178-54281197 MsG0880045103.01.T01:intron 30.0%
! TGATTTTTGTTCAAGCAGTT+TGG - Chr8:54280369-54280388 MsG0880045103.01.T01:intron 30.0%
! TGTCAGTTTTTGTTGCAAAT+AGG - Chr8:54281789-54281808 MsG0880045103.01.T01:intron 30.0%
!! ATTTGACTTGCATAATGAAG+AGG + Chr8:54277505-54277524 None:intergenic 30.0%
!! TGGTTCATTTTTGTTTGTCA+TGG - Chr8:54279998-54280017 MsG0880045103.01.T01:CDS 30.0%
!! TTCATTTTTGTTTGTCATGG+TGG - Chr8:54280001-54280020 MsG0880045103.01.T01:CDS 30.0%
!!! ATGTCATTTTGAGATTCTGT+CGG + Chr8:54278044-54278063 None:intergenic 30.0%
!!! GAAATGTGTTTTGAAAACCA+CGG + Chr8:54278812-54278831 None:intergenic 30.0%
!!! GATATTGAGATTTTGGGTTA+TGG - Chr8:54282197-54282216 MsG0880045103.01.T01:CDS 30.0%
AACAAGATGAAGCTAGATCT+TGG + Chr8:54278557-54278576 None:intergenic 35.0%
AAGAGTCTAACAAAATTCGG+TGG + Chr8:54280985-54281004 None:intergenic 35.0%
AAGTTACTCATTGGAACTCT+TGG + Chr8:54279315-54279334 None:intergenic 35.0%
AATGAAGTTACTACTAAGGG+AGG + Chr8:54278605-54278624 None:intergenic 35.0%
ACCATCCAATTTATACACAC+AGG - Chr8:54278128-54278147 MsG0880045103.01.T01:intron 35.0%
ATACTCATAGATTGTACCAC+GGG - Chr8:54280496-54280515 MsG0880045103.01.T01:intron 35.0%
ATGATACCAAGGGGAATAAT+GGG - Chr8:54279870-54279889 MsG0880045103.01.T01:CDS 35.0%
CAGTTGAACATTATGGGAAA+AGG - Chr8:54281478-54281497 MsG0880045103.01.T01:intron 35.0%
CCAGCTAACAAGTACTTTAA+GGG + Chr8:54277644-54277663 None:intergenic 35.0%
CTCATATATAGACAGAAGAG+GGG + Chr8:54280587-54280606 None:intergenic 35.0%
CTTCTACTCCAAGAAATGTT+GGG - Chr8:54279760-54279779 MsG0880045103.01.T01:intron 35.0%
CTTGCAACTCAATTTGCAAT+TGG - Chr8:54280115-54280134 MsG0880045103.01.T01:CDS 35.0%
GATTAGAGCAAATATGACAG+AGG - Chr8:54279596-54279615 MsG0880045103.01.T01:intron 35.0%
GTCAAGTATTCAATAGATCC+CGG + Chr8:54277568-54277587 None:intergenic 35.0%
GTCTCATATATAGACAGAAG+AGG + Chr8:54280589-54280608 None:intergenic 35.0%
GTTCCAATGAGTAACTTTCA+TGG - Chr8:54279318-54279337 MsG0880045103.01.T01:intron 35.0%
TAACCTGATAAATTCCACCA+GGG + Chr8:54279692-54279711 None:intergenic 35.0%
TACACTCAACAAAGAAGACA+TGG - Chr8:54280617-54280636 MsG0880045103.01.T01:intron 35.0%
TAGGGCTGAAATATGCAAAA+TGG + Chr8:54277743-54277762 None:intergenic 35.0%
TATCATGGTACACTTGATTG+AGG + Chr8:54278343-54278362 None:intergenic 35.0%
TATGATACCAAGGGGAATAA+TGG - Chr8:54279869-54279888 MsG0880045103.01.T01:CDS 35.0%
TCATAATTTCGGTGGCAAAT+GGG + Chr8:54277333-54277352 None:intergenic 35.0%
TCATCAAAGACCAGAATTAG+AGG - Chr8:54279552-54279571 MsG0880045103.01.T01:intron 35.0%
TCCAAGAAATGTTGGGAAAT+CGG - Chr8:54279767-54279786 MsG0880045103.01.T01:intron 35.0%
TCCTGTGTGTATAAATTGGA+TGG + Chr8:54278132-54278151 None:intergenic 35.0%
TCTTCTACTCCAAGAAATGT+TGG - Chr8:54279759-54279778 MsG0880045103.01.T01:intron 35.0%
TGCTCTAATACACTTCTTAG+GGG + Chr8:54281885-54281904 None:intergenic 35.0%
TTCATAATTTCGGTGGCAAA+TGG + Chr8:54277334-54277353 None:intergenic 35.0%
TTTGCTGAAGCTGTCAAAAT+CGG - Chr8:54282021-54282040 MsG0880045103.01.T01:CDS 35.0%
! AAAGTATGAGAGAGCTTTGA+AGG - Chr8:54282252-54282271 MsG0880045103.01.T01:CDS 35.0%
! AAATTTCTCTTTTCGTGTCC+GGG - Chr8:54277547-54277566 MsG0880045103.01.T01:intron 35.0%
! AGGAGTGGTTTCTCTTTTAT+AGG - Chr8:54281809-54281828 MsG0880045103.01.T01:CDS 35.0%
! CAAAATCGGAGTACGATTTT+TGG - Chr8:54282035-54282054 MsG0880045103.01.T01:CDS 35.0%
! GAAGTGGGATATTGAGATTT+TGG - Chr8:54282190-54282209 MsG0880045103.01.T01:CDS 35.0%
! GGAGTGGTTTCTCTTTTATA+GGG - Chr8:54281810-54281829 MsG0880045103.01.T01:CDS 35.0%
! GTTTTTGTTGCAAATAGGAG+TGG - Chr8:54281794-54281813 MsG0880045103.01.T01:intron 35.0%
! TCAAGATGATCCATCCATTT+TGG - Chr8:54277243-54277262 MsG0880045103.01.T01:CDS 35.0%
! TCGGTCACGATTTGAATTTT+GGG + Chr8:54277847-54277866 None:intergenic 35.0%
! TGTGACATTTTTCTCTCACA+AGG - Chr8:54281541-54281560 MsG0880045103.01.T01:intron 35.0%
! TTGGTGCTTAATGAAAGAGA+AGG + Chr8:54279353-54279372 None:intergenic 35.0%
! TTTAGCTTCCATGCAAATGA+AGG + Chr8:54277364-54277383 None:intergenic 35.0%
! TTTTGCATATTTCAGCCCTA+AGG - Chr8:54277743-54277762 MsG0880045103.01.T01:intron 35.0%
!! AAGTATGAGAGAGCTTTGAA+GGG - Chr8:54282253-54282272 MsG0880045103.01.T01:CDS 35.0%
!! AGTGTTGCGAATTGTTGTTT+GGG + Chr8:54280540-54280559 None:intergenic 35.0%
!! AGTTTTGTCAATATGCTTGC+CGG + Chr8:54277893-54277912 None:intergenic 35.0%
!! TACGATTTTTGGACCAGAAT+TGG - Chr8:54282046-54282065 MsG0880045103.01.T01:CDS 35.0%
!!! ACCAAGTAGGATTTTGAGTT+AGG + Chr8:54279377-54279396 None:intergenic 35.0%
!!! CCAAGTAGGATTTTGAGTTA+GGG + Chr8:54279376-54279395 None:intergenic 35.0%
!!! TGCTCCGATTTTTTACGAAT+GGG + Chr8:54282077-54282096 None:intergenic 35.0%
!!! TTGAGATTTTGGGTTATGGA+AGG - Chr8:54282201-54282220 MsG0880045103.01.T01:CDS 35.0%
AACCTGATAAATTCCACCAG+GGG + Chr8:54279691-54279710 None:intergenic 40.0%
AAGACCACAACAACCAAAAG+TGG + Chr8:54281735-54281754 None:intergenic 40.0%
AAGTATCATGGGTTCGAAGT+GGG - Chr8:54282175-54282194 MsG0880045103.01.T01:CDS 40.0%
AGACCACAACAACCAAAAGT+GGG + Chr8:54281734-54281753 None:intergenic 40.0%
ATCAAATACTAGGTGCATCG+TGG - Chr8:54278771-54278790 MsG0880045103.01.T01:intron 40.0%
ATGGAAGGTAAAGATGGAAG+CGG - Chr8:54282216-54282235 MsG0880045103.01.T01:CDS 40.0%
CATCTTGAATCACTGTGTAG+AGG + Chr8:54277231-54277250 None:intergenic 40.0%
CCCTAACTCAAAATCCTACT+TGG - Chr8:54279373-54279392 MsG0880045103.01.T01:intron 40.0%
CGAACTAAAACATCCTAGTC+CGG - Chr8:54277871-54277890 MsG0880045103.01.T01:intron 40.0%
CGCTATAACTGATACCGTAA+AGG + Chr8:54279841-54279860 None:intergenic 40.0%
CTAACCTGATAAATTCCACC+AGG + Chr8:54279693-54279712 None:intergenic 40.0%
GCCAGCTAACAAGTACTTTA+AGG + Chr8:54277645-54277664 None:intergenic 40.0%
GGAATTTATCAGGTTAGTGC+TGG - Chr8:54279696-54279715 MsG0880045103.01.T01:intron 40.0%
GTATATGAGACAAGGGTCAA+AGG - Chr8:54282146-54282165 MsG0880045103.01.T01:CDS 40.0%
TAAAAAATCGGAGCACGATC+TGG - Chr8:54282082-54282101 MsG0880045103.01.T01:CDS 40.0%
TACTCATAGATTGTACCACG+GGG - Chr8:54280497-54280516 MsG0880045103.01.T01:intron 40.0%
TCACCTACACTATGGGAAAA+GGG - Chr8:54281581-54281600 MsG0880045103.01.T01:intron 40.0%
TCTATACGCTCCAAAATGGA+TGG + Chr8:54277256-54277275 None:intergenic 40.0%
TGGGTTATGGAAGGTAAAGA+TGG - Chr8:54282210-54282229 MsG0880045103.01.T01:CDS 40.0%
TGTACAGGCACTTCAATTGT+TGG - Chr8:54279401-54279420 MsG0880045103.01.T01:intron 40.0%
TGTGTATCTGCAGCTATTGA+TGG + Chr8:54278107-54278126 None:intergenic 40.0%
TTATGCAAGTCAAATCGGTG+AGG - Chr8:54277510-54277529 MsG0880045103.01.T01:intron 40.0%
TTGAGCTTATGTGCAAGTGT+GGG + Chr8:54279531-54279550 None:intergenic 40.0%
! ACCGATTTCCCAACATTTCT+TGG + Chr8:54279771-54279790 None:intergenic 40.0%
! AGCGATACACCATACGTTTT+TGG + Chr8:54277429-54277448 None:intergenic 40.0%
! CCCTTAAAGTACTTGTTAGC+TGG - Chr8:54277641-54277660 MsG0880045103.01.T01:intron 40.0%
! GAAGATAGTCTTCCCACTTT+TGG - Chr8:54281719-54281738 MsG0880045103.01.T01:intron 40.0%
! GAGTGTTGCGAATTGTTGTT+TGG + Chr8:54280541-54280560 None:intergenic 40.0%
! GTCGGTCACGATTTGAATTT+TGG + Chr8:54277848-54277867 None:intergenic 40.0%
! TAAGGATCGGGTCTAGAATT+GGG + Chr8:54281139-54281158 None:intergenic 40.0%
! TTAAGGATCGGGTCTAGAAT+TGG + Chr8:54281140-54281159 None:intergenic 40.0%
! TTTCTAGTGGCTTCTCCAAT+GGG - Chr8:54279894-54279913 MsG0880045103.01.T01:CDS 40.0%
! TTTTGCATAGCGAGATGGAT+GGG + Chr8:54277403-54277422 None:intergenic 40.0%
! TTTTTGCATAGCGAGATGGA+TGG + Chr8:54277404-54277423 None:intergenic 40.0%
!! ATCACGGAATTGACTTGTGT+AGG + Chr8:54279963-54279982 None:intergenic 40.0%
!! CTCTTTTATAGGGTGCTCTA+AGG - Chr8:54281820-54281839 MsG0880045103.01.T01:CDS 40.0%
!! GTGTTGCGAATTGTTGTTTG+GGG + Chr8:54280539-54280558 None:intergenic 40.0%
!! GTTGTTGTGGTCTTGTGTAT+GGG - Chr8:54281741-54281760 MsG0880045103.01.T01:intron 40.0%
!! TCACGGAATTGACTTGTGTA+GGG + Chr8:54279962-54279981 None:intergenic 40.0%
!! TGTTGCGAATTGTTGTTTGG+GGG + Chr8:54280538-54280557 None:intergenic 40.0%
!!! GGTTTTTTTGCATAGCGAGA+TGG + Chr8:54277408-54277427 None:intergenic 40.0%
!!! GTAGGATTTTGAGTTAGGGT+TGG + Chr8:54279372-54279391 None:intergenic 40.0%
!!! GTGCTCCGATTTTTTACGAA+TGG + Chr8:54282078-54282097 None:intergenic 40.0%
AACAACCATCACCCACTAGA+AGG - Chr8:54278274-54278293 MsG0880045103.01.T01:intron 45.0%
ACAACCATCACCCACTAGAA+GGG - Chr8:54278275-54278294 MsG0880045103.01.T01:intron 45.0%
ACCTACACTATGGGAAAAGG+GGG - Chr8:54281583-54281602 MsG0880045103.01.T01:intron 45.0%
ACCTGATAAATTCCACCAGG+GGG + Chr8:54279690-54279709 None:intergenic 45.0%
ACTCATAGATTGTACCACGG+GGG - Chr8:54280498-54280517 MsG0880045103.01.T01:intron 45.0%
AGAAAGCCCATTATTCCCCT+TGG + Chr8:54279879-54279898 None:intergenic 45.0%
AGGGGTAAGTCACAAAGACT+TGG - Chr8:54278242-54278261 MsG0880045103.01.T01:intron 45.0%
AGTCTTGAGAGAAGTAGCGA+AGG - Chr8:54282369-54282388 MsG0880045103.01.T01:CDS 45.0%
ATAGGGGTGACTCCATCTAA+CGG - Chr8:54278729-54278748 MsG0880045103.01.T01:intron 45.0%
ATATAGACAGAAGAGGGGCA+TGG + Chr8:54280582-54280601 None:intergenic 45.0%
CAAGTATCATGGGTTCGAAG+TGG - Chr8:54282174-54282193 MsG0880045103.01.T01:CDS 45.0%
CACCTACACTATGGGAAAAG+GGG - Chr8:54281582-54281601 MsG0880045103.01.T01:intron 45.0%
CATGGAGAGCAAAACAGCAT+TGG - Chr8:54279455-54279474 MsG0880045103.01.T01:intron 45.0%
CGATCGTACTTCCACAAATC+CGG + Chr8:54281440-54281459 None:intergenic 45.0%
CTTGAGCTGCAGCTTTCAAT+CGG + Chr8:54277192-54277211 None:intergenic 45.0%
CTTGAGCTTATGTGCAAGTG+TGG + Chr8:54279532-54279551 None:intergenic 45.0%
GCAACTGCGATCTATCAATC+AGG - Chr8:54279657-54279676 MsG0880045103.01.T01:intron 45.0%
GCGTTTGTCAATTGCACATG+AGG - Chr8:54281606-54281625 MsG0880045103.01.T01:intron 45.0%
GGTCGTCGTTATTATAACCG+TGG - Chr8:54278792-54278811 MsG0880045103.01.T01:intron 45.0%
GTCACCTACACTATGGGAAA+AGG - Chr8:54281580-54281599 MsG0880045103.01.T01:intron 45.0%
TACTAAGGGAGGTCACTCTT+TGG + Chr8:54278594-54278613 None:intergenic 45.0%
TCTCAAAATGGGTCCAAGGA+TGG + Chr8:54281272-54281291 None:intergenic 45.0%
TTAAACAAGAGGGACGATGC+AGG - Chr8:54277712-54277731 MsG0880045103.01.T01:intron 45.0%
TTGTGCGTTTCCCTTCTAGT+GGG + Chr8:54278288-54278307 None:intergenic 45.0%
TTTGCATAGCGAGATGGATG+GGG + Chr8:54277402-54277421 None:intergenic 45.0%
! AAGGATCGGGTCTAGAATTG+GGG + Chr8:54281138-54281157 None:intergenic 45.0%
! ATCCTTGGACCCATTTTGAG+AGG - Chr8:54281271-54281290 MsG0880045103.01.T01:intron 45.0%
! CTTTCTAGTGGCTTCTCCAA+TGG - Chr8:54279893-54279912 MsG0880045103.01.T01:CDS 45.0%
! TATAGACAGAAGAGGGGCAT+GGG + Chr8:54280581-54280600 None:intergenic 45.0%
! TCCTACTTGGTAGCATGTAC+AGG - Chr8:54279386-54279405 MsG0880045103.01.T01:intron 45.0%
!! CACGGAATTGACTTGTGTAG+GGG + Chr8:54279961-54279980 None:intergenic 45.0%
!! CTTCCCACTTTTGGTTGTTG+TGG - Chr8:54281728-54281747 MsG0880045103.01.T01:intron 45.0%
!! GGGAATAATGGGCTTTCTAG+TGG - Chr8:54279881-54279900 MsG0880045103.01.T01:CDS 45.0%
!! GGTTGTTGTGGTCTTGTGTA+TGG - Chr8:54281740-54281759 MsG0880045103.01.T01:intron 45.0%
!! GTTAGTGCTGGTGATGACAA+TGG - Chr8:54279708-54279727 MsG0880045103.01.T01:intron 45.0%
!!! GGATGTTTTAGTTCGTGCGT+CGG + Chr8:54277866-54277885 None:intergenic 45.0%
ACACTCCAGCTCTTTCTCTG+CGG - Chr8:54280555-54280574 MsG0880045103.01.T01:intron 50.0%
AGTAGCGAAGGAACCAACTG+CGG - Chr8:54282381-54282400 MsG0880045103.01.T01:CDS 50.0%
CACTAGAAGGGAAACGCACA+AGG - Chr8:54278287-54278306 MsG0880045103.01.T01:intron 50.0%
CCTACACTATGGGAAAAGGG+GGG - Chr8:54281584-54281603 MsG0880045103.01.T01:intron 50.0%
CTAGCGGTAAACCATCCCAT+TGG + Chr8:54279912-54279931 None:intergenic 50.0%
CTCTCAAGACTTTATCCCCG+AGG + Chr8:54282360-54282379 None:intergenic 50.0%
CTTGTGCGTTTCCCTTCTAG+TGG + Chr8:54278289-54278308 None:intergenic 50.0%
GAAGGGTGAAGGTTCGTTAC+CGG - Chr8:54282270-54282289 MsG0880045103.01.T01:CDS 50.0%
GACCTCTCAAAATGGGTCCA+AGG + Chr8:54281276-54281295 None:intergenic 50.0%
GAGATTCTGTCGGATGACAC+AGG + Chr8:54278034-54278053 None:intergenic 50.0%
GCACAAGACAATGGCACTTC+TGG + Chr8:54282338-54282357 None:intergenic 50.0%
GCCTGTACATGCTACCAAGT+AGG + Chr8:54279390-54279409 None:intergenic 50.0%
GGCGCTCAAAAGCTGGAAAA+TGG - Chr8:54277685-54277704 MsG0880045103.01.T01:intron 50.0%
GTCAATATGCTTGCCGGACT+AGG + Chr8:54277887-54277906 None:intergenic 50.0%
GTTAGATGGAGTCACCCCTA+TGG + Chr8:54278730-54278749 None:intergenic 50.0%
TAAGGGAGGTCACTCTTTGG+AGG + Chr8:54278591-54278610 None:intergenic 50.0%
TACCTGCAGCTCACTCCTTA+GGG + Chr8:54277761-54277780 None:intergenic 50.0%
TACTTCCACAAATCCGGAGG+AGG + Chr8:54281434-54281453 None:intergenic 50.0%
TAGGGGTGACTCCATCTAAC+GGG - Chr8:54278730-54278749 MsG0880045103.01.T01:intron 50.0%
TAGTGGCTTCTCCAATGGGA+TGG - Chr8:54279898-54279917 MsG0880045103.01.T01:CDS 50.0%
TCCCCCTGGTGGAATTTATC+AGG - Chr8:54279686-54279705 MsG0880045103.01.T01:intron 50.0%
TCGTACTTCCACAAATCCGG+AGG + Chr8:54281437-54281456 None:intergenic 50.0%
TTACCTGCAGCTCACTCCTT+AGG + Chr8:54277762-54277781 None:intergenic 50.0%
TTGAAAGCTGCAGCTCAAGC+AGG - Chr8:54277193-54277212 MsG0880045103.01.T01:CDS 50.0%
! AGTGCCATTGTCTTGTGCCT+CGG - Chr8:54282340-54282359 MsG0880045103.01.T01:CDS 50.0%
! CAGAGGAGAAGCGTAACACT+TGG - Chr8:54279613-54279632 MsG0880045103.01.T01:intron 50.0%
! GTTGGGAAATCGGTCTTGTC+AGG - Chr8:54279777-54279796 MsG0880045103.01.T01:intron 50.0%
! GTTTCCCTTCTAGTGGGTGA+TGG + Chr8:54278282-54278301 None:intergenic 50.0%
!! CGAATGGGAAGTGCCAATTC+TGG + Chr8:54282062-54282081 None:intergenic 50.0%
!! CGAATTGTTGTTTGGGGGTG+CGG + Chr8:54280533-54280552 None:intergenic 50.0%
!! GAGAGAGCTTTGAAGGGTGA+AGG - Chr8:54282259-54282278 MsG0880045103.01.T01:CDS 50.0%
ACGAGTGGAGAAGACCGAGA+TGG - Chr8:54282303-54282322 MsG0880045103.01.T01:CDS 55.0%
AGGGGGAGTTACCCGTTAGA+TGG + Chr8:54278744-54278763 None:intergenic 55.0%
AGTGGAGAAGACCGAGATGG+TGG - Chr8:54282306-54282325 MsG0880045103.01.T01:CDS 55.0%
ATCCCCGAGGCACAAGACAA+TGG + Chr8:54282347-54282366 None:intergenic 55.0%
ATCGACCTCCTCCGGATTTG+TGG - Chr8:54281426-54281445 MsG0880045103.01.T01:intron 55.0%
CAATCAGGATTGAGTCCCCC+TGG - Chr8:54279672-54279691 MsG0880045103.01.T01:intron 55.0%
CAGCGCAGTCTCACCTCTTA+TGG + Chr8:54277590-54277609 None:intergenic 55.0%
GCATGGAAGCTAAACCCGCA+AGG - Chr8:54277370-54277389 MsG0880045103.01.T01:intron 55.0%
GGATCAAGATCGACCTCCTC+CGG - Chr8:54281418-54281437 MsG0880045103.01.T01:intron 55.0%
GGTCTTCTCCACTCGTGACA+TGG + Chr8:54282299-54282318 None:intergenic 55.0%
TCCACTCGTGACATGGTGAC+CGG + Chr8:54282292-54282311 None:intergenic 55.0%
TGCCATTGTCTTGTGCCTCG+GGG - Chr8:54282342-54282361 MsG0880045103.01.T01:CDS 55.0%
! CCCCCCTTTTCCCATAGTGT+AGG + Chr8:54281587-54281606 None:intergenic 55.0%
! GTGCCATTGTCTTGTGCCTC+GGG - Chr8:54282341-54282360 MsG0880045103.01.T01:CDS 55.0%
!! ATTGTTGTTTGGGGGTGCGG+AGG + Chr8:54280530-54280549 None:intergenic 55.0%
!! GAAGACCGAGATGGTGGACA+AGG - Chr8:54282312-54282331 MsG0880045103.01.T01:CDS 55.0%
!! TCTGGCCTTGTCCACCATCT+CGG + Chr8:54282320-54282339 None:intergenic 55.0%
ACCGGTCACCATGTCACGAG+TGG - Chr8:54282288-54282307 MsG0880045103.01.T01:CDS 60.0%
AGCCCTAAGGAGTGAGCTGC+AGG - Chr8:54277756-54277775 MsG0880045103.01.T01:intron 60.0%
ATGGGCCGCAGAGAAAGAGC+TGG + Chr8:54280563-54280582 None:intergenic 60.0%
CATAGCGAGATGGATGGGGC+TGG + Chr8:54277398-54277417 None:intergenic 60.0%
TCAGGATTGAGTCCCCCTGG+TGG - Chr8:54279675-54279694 MsG0880045103.01.T01:intron 60.0%
TGGATGGGGCTGGATCCTTG+CGG + Chr8:54277388-54277407 None:intergenic 60.0%
!! ACGGAGAGGCGCTCAAAAGC+TGG - Chr8:54277678-54277697 MsG0880045103.01.T01:intron 60.0%
GGATGGGGCTGGATCCTTGC+GGG + Chr8:54277387-54277406 None:intergenic 65.0%
TGCGGAGGTGATAGCCCCCG+TGG + Chr8:54280515-54280534 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 54277166 54282414 54277166 ID=MsG0880045103.01;Name=MsG0880045103.01
Chr8 mRNA 54277166 54282414 54277166 ID=MsG0880045103.01.T01;Parent=MsG0880045103.01;Name=MsG0880045103.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|3|0|394
Chr8 exon 54281803 54282414 54281803 ID=MsG0880045103.01.T01:exon:23420;Parent=MsG0880045103.01.T01
Chr8 exon 54279792 54280172 54279792 ID=MsG0880045103.01.T01:exon:23419;Parent=MsG0880045103.01.T01
Chr8 exon 54277166 54277357 54277166 ID=MsG0880045103.01.T01:exon:23418;Parent=MsG0880045103.01.T01
Chr8 CDS 54281803 54282414 54281803 ID=MsG0880045103.01.T01:cds;Parent=MsG0880045103.01.T01
Chr8 CDS 54279792 54280172 54279792 ID=MsG0880045103.01.T01:cds;Parent=MsG0880045103.01.T01
Chr8 CDS 54277166 54277357 54277166 ID=MsG0880045103.01.T01:cds;Parent=MsG0880045103.01.T01
Gene Sequence

>MsG0880045103.01.T01

ATGAATCCCACAAATAATGATAACCGATTGAAAGCTGCAGCTCAAGCAGGTGATATAGATCTCCTCTACACAGTGATTCAAGATGATCCATCCATTTTGGAGCGTATAGATTTAATACCATTTGTTGAAACTCCTTTACATATTGCTGCATCTATGGGTCATCTCCCATTTGCCACCGAAATTATGAATTTAAAACCTTCATTTGCATGGAAGCTAAACCCGCAAGGATCCAGCCCCATCCATCTCGCTATGCAAAAAAACCAAAAACGTATGGTGTATCGCTTTGTGAACATCAATAAAGATCTTGTTAGAGTTAAAGGAAGAGAATGCTTTACTCCTCTTCATTATGCAAGTCAAATCGGTGAGGTTGATCTTTTAACTAAATTTCTCTTTTCGTGTCCGGGATCTATTGAATACTTGACCATAAGAGGTGAGACTGCGCTGCATATTGCTGTTAAGTACGAACAATATGAGGCCCTTAAAGTACTTGTTAGCTGGCTCAAAAAAAATAAACGGAGAGGCGCTCAAAAGCTGGAAAATGGAATATTAAACAAGAGGGACGATGCAGGCAACACCATTTTGCATATTTCAGCCCTAAGGAGTGAGCTGCAGGCACTTCAATTGTTGGTAGAGACTAATATAAATTTGAACTCAATGAACATGGAGAGCAAAACAGCATTGGACATAGCAAGCACTCCAGAGATCAAGAGTATATTAGAAGTCGCTGATGCTCCCACACTTGCACATAAGCTCAAGTCATCAAAGACCAGAATTAGAGGTAATATGTCAACTTATTTAAGGATTAGAGCAAATATGACAGAGGAGAAGCGTAACACTTGGTTGATAGTTGCGACTCTTGTTGCAACTGCGATCTATCAATCAGGATTGAGTCCCCCTGGTGGAATTTATCAGGTTAGTGCTGGTGATGACAATGGTGTAAACATTTTCTCAAATTCTACTATTTCTTCTACTCCAAGAAATGTTGGGAAATCGGTAAAGATGGAAGCGGTGTTAATACAACAAAAGTATGAGAGAGCTTTGAAGGGTGAAGGTTCGTTACCGGTCACCATGTCACGAGTGGAGAAGACCGAGATGGTGGACAAGGCCAGAAGTGCCATTGTCTTGTGCCTCGGGGATAAAGTCTTGAGAGAAGTAGCGAAGGAACCAACTGCGGCATTGATGTGA
Protein sequence

>MsG0880045103.01.T01

MNPTNNDNRLKAAAQAGDIDLLYTVIQDDPSILERIDLIPFVETPLHIAASMGHLPFATEIMNLKPSFAWKLNPQGSSPIHLAMQKNQKRMVYRFVNINKDLVRVKGRECFTPLHYASQIGEVDLLTKFLFSCPGSIEYLTIRGETALHIAVKYEQYEALKVLVSWLKKNKRRGAQKLENGILNKRDDAGNTILHISALRSELQALQLLVETNINLNSMNMESKTALDIASTPEIKSILEVADAPTLAHKLKSSKTRIRGNMSTYLRIRANMTEEKRNTWLIVATLVATAIYQSGLSPPGGIYQVSAGDDNGVNIFSNSTISSTPRNVGKSVKMEAVLIQQKYERALKGEGSLPVTMSRVEKTEMVDKARSAIVLCLGDKVLREVAKEPTAALM*