AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048977.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048977.01.T01 MTR_7g451760 94.872 273 11 1 175 447 9 278 3.06e-164 464
MsG0080048977.01.T01 MTR_7g451760 40.800 125 71 2 106 227 99 223 6.04e-13 69.3
MsG0080048977.01.T01 MTR_7g047560 94.872 273 11 1 175 447 9 278 3.06e-164 464
MsG0080048977.01.T01 MTR_7g047560 40.800 125 71 2 106 227 99 223 6.04e-13 69.3
MsG0080048977.01.T01 MTR_7g047550 88.068 176 17 2 1 174 17 190 1.97e-93 281
MsG0080048977.01.T01 MTR_7g451750 88.068 176 17 2 1 174 17 190 1.97e-93 281
MsG0080048977.01.T01 MTR_5g089900 33.428 353 184 12 45 378 345 665 1.02e-37 147
MsG0080048977.01.T01 MTR_5g089900 32.581 310 175 9 151 444 326 617 5.03e-31 127
MsG0080048977.01.T01 MTR_5g089900 33.036 224 129 7 169 378 282 498 6.65e-20 93.2
MsG0080048977.01.T01 MTR_0024s0070 32.565 347 173 10 123 414 7 347 1.45e-37 141
MsG0080048977.01.T01 MTR_0024s0070 29.143 350 182 12 46 347 5 336 1.42e-23 102
MsG0080048977.01.T01 MTR_0024s0070 33.333 204 125 6 106 307 154 348 3.43e-20 92.4
MsG0080048977.01.T01 MTR_0024s0070 33.333 189 106 6 106 277 200 385 2.33e-15 77.8
MsG0080048977.01.T01 MTR_6g034795 32.022 356 185 12 45 378 296 616 9.33e-36 141
MsG0080048977.01.T01 MTR_6g034795 31.214 346 196 10 121 441 237 565 9.23e-30 123
MsG0080048977.01.T01 MTR_6g034795 32.394 213 101 8 42 238 400 585 4.44e-15 78.2
MsG0080048977.01.T01 MTR_1g099220 31.339 351 194 9 45 378 299 619 2.55e-35 139
MsG0080048977.01.T01 MTR_1g099220 33.007 306 179 7 151 444 280 571 5.03e-30 124
MsG0080048977.01.T01 MTR_1g099220 28.992 238 145 7 106 327 391 620 1.85e-15 79.7
MsG0080048977.01.T01 MTR_1g099220 29.200 250 129 10 42 275 403 620 1.35e-14 77.0
MsG0080048977.01.T01 MTR_3g096780 29.640 361 214 7 46 401 36 361 5.47e-35 135
MsG0080048977.01.T01 MTR_3g096780 32.209 326 183 10 42 362 85 377 1.13e-33 131
MsG0080048977.01.T01 MTR_3g096780 32.727 220 138 5 155 372 20 231 4.13e-25 107
MsG0080048977.01.T01 MTR_3g096780 32.184 174 109 5 207 378 20 186 1.53e-15 79.0
MsG0080048977.01.T01 MTR_8g094410 32.000 325 181 9 46 362 34 326 1.34e-34 133
MsG0080048977.01.T01 MTR_8g094410 31.579 304 187 10 106 400 18 309 9.06e-27 111
MsG0080048977.01.T01 MTR_8g094410 27.393 303 181 11 155 444 18 294 9.26e-18 85.1
MsG0080048977.01.T01 MTR_8g094410 32.000 325 181 9 46 362 34 326 3.36e-34 131
MsG0080048977.01.T01 MTR_8g094410 31.579 304 187 10 106 400 18 309 1.04e-26 110
MsG0080048977.01.T01 MTR_8g094410 26.452 310 188 10 147 444 13 294 9.42e-18 84.7
MsG0080048977.01.T01 MTR_8g094410 30.471 361 209 10 46 400 34 358 1.09e-33 132
MsG0080048977.01.T01 MTR_8g094410 33.182 220 137 5 155 372 18 229 3.96e-25 107
MsG0080048977.01.T01 MTR_8g094410 27.881 269 154 9 45 309 138 370 4.10e-22 98.6
MsG0080048977.01.T01 MTR_8g094410 30.556 180 116 4 207 384 18 190 1.18e-16 82.4
MsG0080048977.01.T01 MTR_8g094410 30.471 361 209 10 46 400 34 358 1.44e-33 130
MsG0080048977.01.T01 MTR_8g094410 32.198 323 181 10 45 362 86 375 5.90e-33 129
MsG0080048977.01.T01 MTR_8g094410 33.333 228 139 6 147 372 13 229 6.28e-25 106
MsG0080048977.01.T01 MTR_8g094410 30.556 180 116 4 207 384 18 190 1.03e-16 82.0
MsG0080048977.01.T01 MTR_4g029410 30.199 351 187 14 45 373 86 400 1.06e-31 129
MsG0080048977.01.T01 MTR_4g029410 31.164 292 173 11 106 378 71 353 4.01e-21 97.1
MsG0080048977.01.T01 MTR_4g029410 30.804 224 144 5 158 378 24 239 1.32e-20 95.5
MsG0080048977.01.T01 MTR_4g029410 25.602 332 218 9 119 432 35 355 1.83e-19 92.0
MsG0080048977.01.T01 MTR_3g064560 28.691 359 192 11 45 378 324 643 1.17e-31 129
MsG0080048977.01.T01 MTR_3g064560 30.293 307 177 8 121 402 267 561 2.65e-30 124
MsG0080048977.01.T01 MTR_3g097060 34.007 297 158 12 104 372 123 409 3.44e-31 124
MsG0080048977.01.T01 MTR_3g097060 31.439 264 160 9 123 373 39 294 6.30e-26 109
MsG0080048977.01.T01 MTR_3g097060 29.904 311 160 13 45 329 140 418 4.93e-18 86.3
MsG0080048977.01.T01 MTR_3g097060 29.493 217 136 5 174 379 40 250 2.95e-16 80.9
MsG0080048977.01.T01 MTR_8g094410 34.711 242 147 6 124 362 8 241 2.07e-30 120
MsG0080048977.01.T01 MTR_8g094410 27.881 269 154 9 45 309 4 236 9.01e-23 98.6
MsG0080048977.01.T01 MTR_8g094410 31.760 233 145 6 170 400 4 224 6.91e-20 90.5
MsG0080048977.01.T01 MTR_8g094410 36.842 95 59 1 278 372 2 95 7.73e-12 66.6
MsG0080048977.01.T01 MTR_7g072410 30.347 346 195 9 45 374 284 599 8.15e-30 123
MsG0080048977.01.T01 MTR_7g072410 28.467 274 172 6 119 372 224 493 1.02e-19 92.8
MsG0080048977.01.T01 MTR_7g072410 31.416 226 135 7 165 378 220 437 6.49e-18 87.0
MsG0080048977.01.T01 MTR_1g042800 28.045 353 195 9 45 373 279 596 5.08e-29 120
MsG0080048977.01.T01 MTR_1g042800 28.409 352 209 11 118 444 220 553 1.66e-23 104
MsG0080048977.01.T01 MTR_1g042800 29.956 227 137 7 165 378 215 432 1.92e-17 85.9
MsG0080048977.01.T01 MTR_3g097060 35.178 253 138 11 104 340 123 365 5.50e-28 114
MsG0080048977.01.T01 MTR_3g097060 31.439 264 160 9 123 373 39 294 5.93e-26 108
MsG0080048977.01.T01 MTR_3g097060 29.493 217 136 5 174 379 40 250 3.35e-16 80.5
MsG0080048977.01.T01 MTR_3g097060 31.765 255 128 11 45 285 140 362 6.58e-15 76.6
MsG0080048977.01.T01 MTR_0095s0070 29.555 247 162 6 124 366 33 271 2.41e-27 110
MsG0080048977.01.T01 MTR_0095s0070 32.627 236 142 7 139 372 5 225 5.15e-23 98.6
MsG0080048977.01.T01 MTR_0095s0070 30.935 278 153 9 46 317 30 274 7.93e-23 98.2
MsG0080048977.01.T01 MTR_0095s0070 31.677 161 101 4 226 384 33 186 2.39e-15 76.6
MsG0080048977.01.T01 MTR_0095s0070 26.667 165 95 4 45 207 134 274 4.16e-11 63.9
MsG0080048977.01.T01 MTR_8g094410 35.407 209 126 5 155 362 2 202 1.20e-26 108
MsG0080048977.01.T01 MTR_8g094410 31.250 208 127 7 106 309 2 197 6.90e-21 92.4
MsG0080048977.01.T01 MTR_8g094410 31.795 195 121 4 207 400 2 185 6.01e-17 81.3
MsG0080048977.01.T01 MTR_7g016640 29.110 292 158 9 120 378 22 297 3.92e-25 107
MsG0080048977.01.T01 MTR_7g016640 30.218 321 176 13 41 340 18 311 1.98e-21 96.3
MsG0080048977.01.T01 MTR_7g016640 29.618 314 163 9 46 306 83 391 3.26e-21 95.5
MsG0080048977.01.T01 MTR_7g016640 29.110 292 158 9 120 378 22 297 7.09e-25 107
MsG0080048977.01.T01 MTR_7g016640 30.473 338 174 11 46 329 83 413 6.46e-24 104
MsG0080048977.01.T01 MTR_7g016640 30.218 321 176 13 41 340 18 311 2.38e-21 96.7
MsG0080048977.01.T01 MTR_7g086050 27.972 286 182 8 112 382 148 424 1.41e-23 104
MsG0080048977.01.T01 MTR_7g086050 29.316 307 172 10 45 336 154 430 1.90e-23 104
MsG0080048977.01.T01 MTR_7g086050 30.693 202 106 9 213 400 148 329 5.04e-12 68.6
MsG0080048977.01.T01 MTR_5g038220 29.217 332 205 13 121 441 16 328 1.26e-20 93.6
MsG0080048977.01.T01 MTR_5g038220 30.746 335 170 13 45 358 66 359 2.02e-20 93.2
MsG0080048977.01.T01 MTR_5g038220 36.196 163 92 5 280 441 15 166 4.06e-14 73.9
MsG0080048977.01.T01 MTR_1g006695 26.061 330 179 11 105 384 16 330 6.90e-20 92.0
MsG0080048977.01.T01 MTR_1g006695 28.426 394 195 17 45 358 32 418 4.52e-18 86.7
MsG0080048977.01.T01 MTR_1g006695 42.529 87 48 1 258 342 10 96 9.72e-11 63.9
MsG0080048977.01.T01 MTR_2g079610 24.859 354 246 9 100 444 107 449 1.41e-19 91.3
MsG0080048977.01.T01 MTR_2g079610 27.869 305 202 9 106 400 168 464 3.33e-16 81.3
MsG0080048977.01.T01 MTR_2g079610 26.937 271 172 10 101 358 220 477 8.53e-15 76.6
MsG0080048977.01.T01 MTR_3g109650 26.979 341 178 13 87 372 5 329 3.72e-19 90.5
MsG0080048977.01.T01 MTR_3g109650 26.748 329 180 15 49 337 39 346 2.52e-14 75.5
MsG0080048977.01.T01 MTR_3g109650 29.758 289 144 14 115 358 157 431 3.36e-13 72.0
MsG0080048977.01.T01 MTR_3g086300 31.092 238 151 7 153 382 148 380 6.16e-19 89.7
MsG0080048977.01.T01 MTR_3g086300 24.934 377 234 13 46 401 167 515 1.22e-15 79.3
MsG0080048977.01.T01 MTR_3g086300 26.966 178 117 4 272 446 158 325 2.14e-12 69.3
MsG0080048977.01.T01 MTR_3g069030 28.958 259 149 8 97 329 212 461 7.30e-18 85.9
MsG0080048977.01.T01 MTR_3g069030 29.752 242 146 9 45 277 235 461 2.32e-13 72.0
MsG0080048977.01.T01 MTR_3g069030 27.897 233 137 7 204 410 217 444 2.75e-11 65.9
MsG0080048977.01.T01 MTR_7g063440 29.707 239 130 6 148 358 137 365 2.24e-17 84.0
MsG0080048977.01.T01 MTR_7g063440 30.806 211 121 5 190 377 124 332 2.65e-16 80.9
MsG0080048977.01.T01 MTR_7g063440 29.008 262 143 8 99 329 138 387 4.12e-16 80.1
MsG0080048977.01.T01 MTR_7g063440 29.630 243 149 9 45 278 159 388 1.42e-14 75.5
MsG0080048977.01.T01 MTR_7g063440 29.600 250 143 7 148 372 229 470 3.86e-17 84.0
MsG0080048977.01.T01 MTR_7g063440 30.806 211 121 5 190 377 216 424 4.39e-16 80.5
MsG0080048977.01.T01 MTR_7g063440 29.008 262 143 8 99 329 230 479 6.70e-16 80.1
MsG0080048977.01.T01 MTR_7g063440 29.630 243 149 9 45 278 251 480 2.21e-14 75.5
MsG0080048977.01.T01 MTR_5g020630 27.586 377 196 12 124 441 29 387 8.11e-17 82.8
MsG0080048977.01.T01 MTR_5g020630 25.476 420 229 15 45 441 81 439 5.72e-15 77.0
MsG0080048977.01.T01 MTR_7g063440 30.806 211 121 5 190 377 216 424 2.79e-16 80.9
MsG0080048977.01.T01 MTR_3g113250 28.287 251 151 8 151 379 57 300 3.50e-16 81.3
MsG0080048977.01.T01 MTR_3g113250 26.648 349 201 14 45 372 78 392 1.20e-14 76.3
MsG0080048977.01.T01 MTR_3g113250 32.143 140 90 3 237 373 33 170 2.25e-14 75.5
MsG0080048977.01.T01 MTR_3g109650 29.237 236 132 9 104 307 102 334 3.90e-14 74.7
MsG0080048977.01.T01 MTR_3g109650 27.920 351 188 15 54 358 2 333 7.49e-14 73.6
MsG0080048977.01.T01 MTR_0095s0120 38.889 90 55 0 273 362 1 90 8.92e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048977.01.T01 AT5G60870 62.939 456 150 7 2 444 1 450 0.0 524
MsG0080048977.01.T01 AT5G60870 62.832 452 150 6 2 444 1 443 0.0 523
MsG0080048977.01.T01 AT5G60870 63.990 386 124 5 2 378 1 380 1.54e-160 459
MsG0080048977.01.T01 AT5G60870 36.719 128 77 3 95 218 255 382 5.73e-13 70.9
MsG0080048977.01.T01 AT5G60870 69.259 270 80 1 175 444 8 274 5.52e-120 351
MsG0080048977.01.T01 AT5G60870 37.956 137 81 3 95 227 86 222 8.08e-18 84.0
MsG0080048977.01.T01 AT5G12350 35.227 352 174 12 47 378 330 647 4.80e-41 157
MsG0080048977.01.T01 AT5G12350 33.333 243 139 5 151 378 309 543 1.29e-30 125
MsG0080048977.01.T01 AT5G12350 29.667 300 163 8 45 327 380 648 2.58e-20 94.7
MsG0080048977.01.T01 AT5G19420 33.811 349 183 10 47 378 334 651 1.00e-39 152
MsG0080048977.01.T01 AT5G19420 31.715 309 178 7 151 444 313 603 7.88e-32 129
MsG0080048977.01.T01 AT5G19420 31.532 222 133 6 169 378 269 483 3.02e-19 91.3
MsG0080048977.01.T01 AT5G19420 33.811 349 183 10 47 378 334 651 1.25e-39 152
MsG0080048977.01.T01 AT5G19420 31.715 309 178 7 151 444 313 603 1.48e-31 128
MsG0080048977.01.T01 AT5G19420 31.532 222 133 6 169 378 269 483 6.65e-19 90.5
MsG0080048977.01.T01 AT5G19420 33.811 349 183 10 47 378 368 685 1.42e-39 152
MsG0080048977.01.T01 AT5G19420 31.715 309 178 7 151 444 347 637 1.35e-31 129
MsG0080048977.01.T01 AT5G19420 31.532 222 133 6 169 378 303 517 5.88e-19 90.5
MsG0080048977.01.T01 AT5G16040 30.824 425 227 16 42 441 3 385 4.93e-39 145
MsG0080048977.01.T01 AT5G16040 32.143 196 116 5 98 277 193 387 1.53e-15 78.6
MsG0080048977.01.T01 AT5G16040 26.042 288 177 11 165 441 1 263 1.76e-12 69.3
MsG0080048977.01.T01 AT3G02510 29.078 423 237 14 42 441 3 385 4.30e-37 140
MsG0080048977.01.T01 AT3G02510 32.653 196 115 5 98 277 193 387 1.01e-16 82.0
MsG0080048977.01.T01 AT3G02510 31.818 198 86 8 45 219 216 387 5.88e-11 64.3
MsG0080048977.01.T01 AT5G63860 31.266 387 224 12 46 426 36 386 1.02e-36 140
MsG0080048977.01.T01 AT5G63860 33.526 346 208 11 106 446 20 348 4.31e-36 138
MsG0080048977.01.T01 AT1G76950 31.356 354 192 10 45 378 301 623 2.05e-36 143
MsG0080048977.01.T01 AT1G76950 32.468 308 180 8 151 444 282 575 4.46e-28 118
MsG0080048977.01.T01 AT5G16040 31.268 339 182 11 46 370 7 308 7.95e-35 132
MsG0080048977.01.T01 AT5G16040 34.601 263 154 9 124 378 10 262 1.02e-29 119
MsG0080048977.01.T01 AT5G16040 26.042 288 177 11 165 441 1 263 1.43e-12 68.9
MsG0080048977.01.T01 AT3G02510 30.814 344 198 11 121 441 1 327 4.33e-34 130
MsG0080048977.01.T01 AT3G02510 32.653 196 115 5 98 277 135 329 5.94e-17 82.0
MsG0080048977.01.T01 AT3G02510 31.818 198 86 8 45 219 158 329 5.40e-11 64.3
MsG0080048977.01.T01 AT5G42140 33.448 290 170 7 106 378 334 617 9.87e-34 135
MsG0080048977.01.T01 AT5G42140 31.909 351 199 11 119 444 234 569 6.30e-31 126
MsG0080048977.01.T01 AT5G42140 28.992 238 145 7 106 327 389 618 7.19e-17 84.0
MsG0080048977.01.T01 AT5G42140 29.200 250 129 9 42 275 401 618 3.47e-14 75.5
MsG0080048977.01.T01 AT5G42140 33.448 290 170 7 106 378 334 617 9.87e-34 135
MsG0080048977.01.T01 AT5G42140 31.909 351 199 11 119 444 234 569 6.30e-31 126
MsG0080048977.01.T01 AT5G42140 28.992 238 145 7 106 327 389 618 7.19e-17 84.0
MsG0080048977.01.T01 AT5G42140 29.200 250 129 9 42 275 401 618 3.47e-14 75.5
MsG0080048977.01.T01 AT1G65920 28.402 338 205 7 121 441 261 578 5.41e-33 132
MsG0080048977.01.T01 AT1G65920 28.775 351 200 9 45 378 312 629 7.15e-25 108
MsG0080048977.01.T01 AT1G65920 28.402 338 205 7 121 441 215 532 7.03e-33 132
MsG0080048977.01.T01 AT1G65920 28.775 351 200 9 45 378 266 583 1.02e-24 108
MsG0080048977.01.T01 AT3G23270 30.086 349 188 11 45 372 271 584 1.12e-32 132
MsG0080048977.01.T01 AT3G23270 29.316 307 188 8 151 444 252 542 1.57e-21 98.2
MsG0080048977.01.T01 AT3G23270 30.667 225 138 6 165 378 207 424 4.24e-17 84.7
MsG0080048977.01.T01 AT3G23270 30.081 246 125 9 45 275 378 591 5.99e-16 81.3
MsG0080048977.01.T01 AT3G23270 30.086 349 188 11 45 372 275 588 1.28e-32 132
MsG0080048977.01.T01 AT3G23270 29.316 307 188 8 151 444 256 546 1.55e-21 98.6
MsG0080048977.01.T01 AT3G23270 30.667 225 138 6 165 378 211 428 4.18e-17 84.7
MsG0080048977.01.T01 AT3G23270 30.081 246 125 9 45 275 382 595 5.55e-16 81.3
MsG0080048977.01.T01 AT3G02510 28.947 342 192 10 42 369 3 307 2.52e-32 125
MsG0080048977.01.T01 AT3G02510 33.442 308 181 10 124 421 10 303 1.01e-31 123
MsG0080048977.01.T01 AT1G69710 31.507 292 175 6 105 377 356 641 5.49e-32 130
MsG0080048977.01.T01 AT1G69710 29.107 347 211 9 109 428 250 588 8.75e-26 111
MsG0080048977.01.T01 AT1G69710 31.507 292 175 6 105 377 343 628 5.60e-32 130
MsG0080048977.01.T01 AT1G69710 29.107 347 211 9 109 428 237 575 8.78e-26 111
MsG0080048977.01.T01 AT3G47660 34.521 365 176 19 45 385 316 641 5.84e-32 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 255 528 2.21e-30 125
MsG0080048977.01.T01 AT3G47660 34.521 365 176 19 45 385 316 641 5.84e-32 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 255 528 2.21e-30 125
MsG0080048977.01.T01 AT3G47660 34.521 365 176 19 45 385 319 644 5.96e-32 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 258 531 2.08e-30 125
MsG0080048977.01.T01 AT3G47660 34.247 365 177 18 45 385 174 499 6.02e-32 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 113 386 1.62e-30 125
MsG0080048977.01.T01 AT3G47660 34.521 365 176 19 45 385 319 644 7.65e-32 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 258 531 2.67e-30 124
MsG0080048977.01.T01 AT3G47660 34.247 365 177 18 45 385 241 566 9.31e-32 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 180 453 1.93e-30 125
MsG0080048977.01.T01 AT3G47660 34.247 365 177 18 45 385 355 680 1.01e-31 129
MsG0080048977.01.T01 AT3G47660 34.050 279 158 10 121 378 294 567 2.48e-30 125
MsG0080048977.01.T01 AT4G14368 29.799 349 189 11 45 372 290 603 1.03e-31 129
MsG0080048977.01.T01 AT4G14368 29.464 336 201 11 119 428 230 555 6.24e-25 108
MsG0080048977.01.T01 AT4G14368 29.268 246 127 9 45 275 397 610 8.88e-15 77.4
MsG0080048977.01.T01 AT4G14368 29.799 349 189 11 45 372 290 603 1.05e-31 129
MsG0080048977.01.T01 AT4G14368 29.464 336 201 11 119 428 230 555 2.87e-25 109
MsG0080048977.01.T01 AT4G14368 28.727 275 147 10 45 304 397 637 5.68e-15 78.2
MsG0080048977.01.T01 AT4G14368 29.799 349 189 11 45 372 288 601 1.07e-31 129
MsG0080048977.01.T01 AT4G14368 28.829 333 207 9 119 428 228 553 6.47e-25 108
MsG0080048977.01.T01 AT4G14368 29.268 246 127 9 45 275 395 608 8.95e-15 77.4
MsG0080048977.01.T01 AT4G14368 29.799 349 189 11 45 372 283 596 1.10e-31 129
MsG0080048977.01.T01 AT4G14368 29.464 336 201 11 119 428 223 548 6.58e-25 108
MsG0080048977.01.T01 AT4G14368 28.727 275 147 10 45 304 390 630 8.78e-15 77.4
MsG0080048977.01.T01 AT1G27060 31.269 323 174 10 45 358 68 351 9.54e-29 117
MsG0080048977.01.T01 AT1G27060 34.821 224 134 6 121 339 17 233 1.42e-23 102
MsG0080048977.01.T01 AT1G27060 26.377 345 204 12 45 379 16 320 4.52e-16 80.1
MsG0080048977.01.T01 AT1G27060 29.630 216 142 4 170 382 16 224 7.47e-16 79.3
MsG0080048977.01.T01 AT1G27060 28.378 148 89 1 261 391 49 196 1.52e-12 69.3
MsG0080048977.01.T01 AT5G08710 34.211 304 156 12 106 378 139 429 1.42e-28 117
MsG0080048977.01.T01 AT5G08710 30.827 266 159 9 123 373 53 308 1.21e-23 103
MsG0080048977.01.T01 AT5G08710 27.331 311 168 12 45 329 154 432 9.42e-14 73.2
MsG0080048977.01.T01 AT3G03790 32.751 229 136 6 121 338 152 373 8.19e-26 111
MsG0080048977.01.T01 AT3G03790 28.115 313 168 11 45 336 151 427 7.58e-21 96.3
MsG0080048977.01.T01 AT3G03790 29.787 188 118 5 168 348 149 329 1.56e-14 76.6
MsG0080048977.01.T01 AT3G03790 32.751 229 136 6 121 338 155 376 8.42e-26 111
MsG0080048977.01.T01 AT3G03790 28.115 313 168 11 45 336 154 430 8.30e-21 96.3
MsG0080048977.01.T01 AT3G03790 30.319 188 117 5 168 348 152 332 9.67e-15 77.4
MsG0080048977.01.T01 AT3G03790 32.751 229 136 6 121 338 155 376 1.17e-25 110
MsG0080048977.01.T01 AT3G03790 28.115 313 168 11 45 336 154 430 1.10e-20 95.9
MsG0080048977.01.T01 AT3G03790 30.319 188 117 5 168 348 152 332 1.24e-14 77.0
MsG0080048977.01.T01 AT3G02300 28.231 294 166 8 120 382 32 311 8.52e-25 107
MsG0080048977.01.T01 AT3G02300 29.586 338 177 11 46 329 93 423 4.60e-21 95.9
MsG0080048977.01.T01 AT3G02300 30.061 326 170 14 41 340 28 321 2.18e-20 94.0
MsG0080048977.01.T01 AT3G02300 28.231 294 166 8 120 382 21 300 9.58e-25 106
MsG0080048977.01.T01 AT3G02300 29.586 338 177 11 46 329 82 412 4.63e-21 95.9
MsG0080048977.01.T01 AT3G02300 30.061 326 170 14 41 340 17 310 2.24e-20 93.6
MsG0080048977.01.T01 AT5G08710 30.827 266 159 9 123 373 53 308 1.36e-24 104
MsG0080048977.01.T01 AT5G08710 35.610 205 104 8 106 293 139 332 3.36e-19 89.0
MsG0080048977.01.T01 AT3G15430 28.244 262 168 8 103 354 113 364 2.44e-21 96.7
MsG0080048977.01.T01 AT3G15430 28.239 301 184 10 86 376 207 485 6.71e-16 80.1
MsG0080048977.01.T01 AT3G15430 27.897 233 150 8 154 378 115 337 1.57e-15 79.0
MsG0080048977.01.T01 AT3G15430 28.244 262 168 8 103 354 113 364 2.44e-21 96.7
MsG0080048977.01.T01 AT3G15430 28.239 301 184 10 86 376 207 485 6.71e-16 80.1
MsG0080048977.01.T01 AT3G15430 27.897 233 150 8 154 378 115 337 1.57e-15 79.0
MsG0080048977.01.T01 AT3G15430 28.244 262 168 8 103 354 113 364 2.44e-21 96.7
MsG0080048977.01.T01 AT3G15430 28.239 301 184 10 86 376 207 485 6.71e-16 80.1
MsG0080048977.01.T01 AT3G15430 27.897 233 150 8 154 378 115 337 1.57e-15 79.0
MsG0080048977.01.T01 AT3G15430 28.244 262 168 8 103 354 113 364 2.44e-21 96.7
MsG0080048977.01.T01 AT3G15430 28.239 301 184 10 86 376 207 485 6.71e-16 80.1
MsG0080048977.01.T01 AT3G15430 27.897 233 150 8 154 378 115 337 1.57e-15 79.0
MsG0080048977.01.T01 AT3G15430 28.244 262 168 8 103 354 113 364 2.44e-21 96.7
MsG0080048977.01.T01 AT3G15430 28.239 301 184 10 86 376 207 485 6.71e-16 80.1
MsG0080048977.01.T01 AT3G15430 27.897 233 150 8 154 378 115 337 1.57e-15 79.0
MsG0080048977.01.T01 AT3G15430 28.244 262 168 8 103 354 113 364 2.44e-21 96.7
MsG0080048977.01.T01 AT3G15430 28.239 301 184 10 86 376 207 485 6.71e-16 80.1
MsG0080048977.01.T01 AT3G15430 27.897 233 150 8 154 378 115 337 1.57e-15 79.0
MsG0080048977.01.T01 AT5G48330 29.940 334 186 12 45 372 102 393 3.60e-20 93.2
MsG0080048977.01.T01 AT5G48330 33.333 177 111 3 233 405 55 228 9.56e-19 88.6
MsG0080048977.01.T01 AT5G48330 27.151 372 197 12 124 441 49 400 4.99e-16 80.5
MsG0080048977.01.T01 AT5G48330 29.341 334 189 12 45 372 102 394 3.83e-20 92.8
MsG0080048977.01.T01 AT5G48330 33.146 178 111 3 233 405 55 229 1.07e-18 88.6
MsG0080048977.01.T01 AT5G48330 26.810 373 198 11 124 441 49 401 5.68e-16 80.1
MsG0080048977.01.T01 AT5G11580 28.615 325 164 14 104 372 19 331 1.56e-18 88.6
MsG0080048977.01.T01 AT5G11580 27.698 278 152 9 151 387 17 286 3.42e-15 78.2
MsG0080048977.01.T01 AT5G11580 28.652 356 186 18 49 358 97 430 1.67e-12 69.7
MsG0080048977.01.T01 AT3G26100 26.621 293 148 8 153 384 145 431 3.93e-18 87.4
MsG0080048977.01.T01 AT3G26100 29.348 276 162 13 111 361 260 527 1.29e-13 73.2
MsG0080048977.01.T01 AT3G26100 24.138 377 237 12 45 400 163 511 1.90e-12 69.7
MsG0080048977.01.T01 AT3G26100 27.055 292 177 9 16 293 242 511 2.81e-12 68.9
MsG0080048977.01.T01 AT3G26100 26.621 293 148 8 153 384 145 431 3.93e-18 87.4
MsG0080048977.01.T01 AT3G26100 29.348 276 162 13 111 361 260 527 1.29e-13 73.2
MsG0080048977.01.T01 AT3G26100 24.138 377 237 12 45 400 163 511 1.90e-12 69.7
MsG0080048977.01.T01 AT3G26100 27.055 292 177 9 16 293 242 511 2.81e-12 68.9
MsG0080048977.01.T01 AT3G26100 26.621 293 148 8 153 384 145 431 3.93e-18 87.4
MsG0080048977.01.T01 AT3G26100 29.348 276 162 13 111 361 260 527 1.29e-13 73.2
MsG0080048977.01.T01 AT3G26100 24.138 377 237 12 45 400 163 511 1.90e-12 69.7
MsG0080048977.01.T01 AT3G26100 27.055 292 177 9 16 293 242 511 2.81e-12 68.9
MsG0080048977.01.T01 AT3G26100 26.621 293 148 8 153 384 45 331 5.80e-18 86.3
MsG0080048977.01.T01 AT3G26100 29.348 276 162 13 111 361 160 427 2.13e-13 72.4
MsG0080048977.01.T01 AT3G26100 27.055 292 177 9 16 293 142 411 1.27e-12 69.7
MsG0080048977.01.T01 AT3G26100 25.080 311 196 9 45 346 63 345 5.98e-12 67.8
MsG0080048977.01.T01 AT3G26100 26.621 293 148 8 153 384 45 331 5.80e-18 86.3
MsG0080048977.01.T01 AT3G26100 29.348 276 162 13 111 361 160 427 2.13e-13 72.4
MsG0080048977.01.T01 AT3G26100 27.055 292 177 9 16 293 142 411 1.27e-12 69.7
MsG0080048977.01.T01 AT3G26100 25.080 311 196 9 45 346 63 345 5.98e-12 67.8
MsG0080048977.01.T01 AT3G26100 26.621 293 148 8 153 384 45 331 5.80e-18 86.3
MsG0080048977.01.T01 AT3G26100 29.348 276 162 13 111 361 160 427 2.13e-13 72.4
MsG0080048977.01.T01 AT3G26100 27.055 292 177 9 16 293 142 411 1.27e-12 69.7
MsG0080048977.01.T01 AT3G26100 25.080 311 196 9 45 346 63 345 5.98e-12 67.8
MsG0080048977.01.T01 AT3G53830 30.385 260 136 8 106 329 247 497 1.26e-17 85.5
MsG0080048977.01.T01 AT3G53830 31.707 246 141 10 45 275 262 495 1.83e-15 79.0
MsG0080048977.01.T01 AT3G53830 29.461 241 131 6 151 359 243 476 2.17e-15 78.6
MsG0080048977.01.T01 AT3G53830 30.093 216 124 5 193 382 233 447 3.74e-15 77.8
MsG0080048977.01.T01 AT3G53830 30.385 260 136 8 106 329 219 469 1.48e-17 85.1
MsG0080048977.01.T01 AT3G53830 31.707 246 141 10 45 275 234 467 2.07e-15 78.6
MsG0080048977.01.T01 AT3G53830 29.461 241 131 6 151 359 215 448 3.05e-15 78.2
MsG0080048977.01.T01 AT3G53830 30.093 216 124 5 193 382 205 419 5.81e-15 77.4
MsG0080048977.01.T01 AT1G19880 29.151 271 159 11 137 379 41 306 2.02e-17 85.1
MsG0080048977.01.T01 AT1G19880 26.479 355 200 13 45 372 78 398 2.81e-12 68.9
MsG0080048977.01.T01 AT3G55580 30.000 250 139 7 151 372 235 476 8.63e-17 82.8
MsG0080048977.01.T01 AT3G55580 29.297 256 140 8 104 327 237 483 6.53e-16 80.1
MsG0080048977.01.T01 AT3G55580 25.378 331 189 9 152 441 119 432 9.62e-14 73.6
MsG0080048977.01.T01 AT3G55580 28.879 232 139 6 192 401 224 451 7.25e-13 70.9
MsG0080048977.01.T01 AT3G55580 28.049 246 146 9 45 275 254 483 4.60e-12 68.2
MsG0080048977.01.T01 AT3G53830 30.332 211 120 5 193 377 233 442 5.39e-15 77.4
MsG0080048977.01.T01 AT3G53830 30.332 211 120 5 193 377 205 414 6.96e-15 76.6
MsG0080048977.01.T01 AT5G11580 29.720 286 149 14 115 358 4 279 2.47e-12 68.9

Find 24 sgRNAs with CRISPR-Local

Find 516 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCGCAGTTGGGAGTTCC+TGG 0.263250 contig580end:+15002 MsG0080048977.01.T01:exon
AGAATGCATCAATGAATAAA+TGG 0.292404 contig580end:+15285 MsG0080048977.01.T01:exon
CTTGACCAACGTATATTTCA+TGG 0.331112 contig580end:+15227 MsG0080048977.01.T01:exon
TGCCATGTGTTTAGCTTTGA+GGG 0.388148 contig580end:+15127 MsG0080048977.01.T01:exon
TTAATGGAAGATGATGGATT+AGG 0.405703 contig580end:+15065 MsG0080048977.01.T01:exon
ATGCCATGTGTTTAGCTTTG+AGG 0.433050 contig580end:+15126 MsG0080048977.01.T01:exon
GTTGATTATGTCAGCTGTCC+TGG 0.454935 contig580end:+15156 MsG0080048977.01.T01:exon
AACTCCCAACTGCGAATCAC+TGG 0.481923 contig580end:-14997 MsG0080048977.01.T01:intergenic
AATGCCAGTGATTCGCAGTT+GGG 0.485138 contig580end:+14993 MsG0080048977.01.T01:exon
GGTTGTATCGCTGGTAGCCC+AGG 0.507771 contig580end:-15020 MsG0080048977.01.T01:intergenic
ACAGGGCATGGTTGTATCGC+TGG 0.510257 contig580end:-15029 MsG0080048977.01.T01:intergenic
TTGACCAACGTATATTTCAT+GGG 0.526689 contig580end:+15228 MsG0080048977.01.T01:exon
AAATGCCAGTGATTCGCAGT+TGG 0.535966 contig580end:+14992 MsG0080048977.01.T01:exon
ATTCGCAGTTGGGAGTTCCT+GGG 0.550758 contig580end:+15003 MsG0080048977.01.T01:exon
CTGTCAATGAAGAAATCTCC+AGG 0.557477 contig580end:-15174 MsG0080048977.01.T01:intergenic
AAATTGACTTCAACAGGGCA+TGG 0.567809 contig580end:-15041 MsG0080048977.01.T01:intergenic
CATTGACAGTAATGCCGTGT+TGG 0.568741 contig580end:+15188 MsG0080048977.01.T01:exon
ACAGTAATGCCGTGTTGGCA+TGG 0.571442 contig580end:+15193 MsG0080048977.01.T01:exon
TAAAGGAAAATTATACATGT+GGG 0.586475 contig580end:+14969 MsG0080048977.01.T01:intron
ATAAAGGAAAATTATACATG+TGG 0.595071 contig580end:+14968 MsG0080048977.01.T01:intron
TTCACCCATGAAATATACGT+TGG 0.607736 contig580end:-15232 MsG0080048977.01.T01:intergenic
CAACTATATCCATGCCAACA+CGG 0.643142 contig580end:-15202 MsG0080048977.01.T01:intergenic
TTCCCTCAAAGCTAAACACA+TGG 0.660310 contig580end:-15129 MsG0080048977.01.T01:intergenic
TGATGGATTAGGATCACACA+AGG 0.686154 contig580end:+15076 MsG0080048977.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAAAAAAAAAAAA+AGG + contig580end:10374-10393 MsG0080048977.01.T01:intron 0.0%
!! TTTAAATATATTAAAAAAAA+GGG - contig580end:12574-12593 MsG0080048977.01.T01:intergenic 0.0%
!! ATATTATATATATTTCTTGT+GGG + contig580end:14397-14416 MsG0080048977.01.T01:CDS 10.0%
!! GAAAAAAAAAAATCATATAA+AGG - contig580end:13973-13992 MsG0080048977.01.T01:intergenic 10.0%
!!! ACTAACAAAAAATATATTTT+AGG + contig580end:12377-12396 MsG0080048977.01.T01:intron 10.0%
!! AAAAAAAAATCATATAAAGG+AGG - contig580end:13970-13989 MsG0080048977.01.T01:intergenic 15.0%
!! AATAAGTATATATTAGACTA+AGG + contig580end:11324-11343 MsG0080048977.01.T01:intron 15.0%
!! AATAATTAAGACTTCAAATA+AGG + contig580end:13504-13523 MsG0080048977.01.T01:intron 15.0%
!! AATTAAGCATTAAAATTAGA+TGG - contig580end:12152-12171 MsG0080048977.01.T01:intergenic 15.0%
!! ATATGAAAATTATCTCATAA+TGG - contig580end:13600-13619 MsG0080048977.01.T01:intergenic 15.0%
!! CATATTATATATATTTCTTG+TGG + contig580end:14396-14415 MsG0080048977.01.T01:CDS 15.0%
!! TACTAATGTAAATATAGTTA+TGG - contig580end:11164-11183 MsG0080048977.01.T01:intergenic 15.0%
!! TATTATATATATTTCTTGTG+GGG + contig580end:14398-14417 MsG0080048977.01.T01:CDS 15.0%
!!! AAAATTTATATCAACAGTTT+TGG + contig580end:8982-9001 MsG0080048977.01.T01:exon 15.0%
!!! AATTATGCTTTTTTTTTTTG+AGG - contig580end:9377-9396 MsG0080048977.01.T01:intergenic 15.0%
!!! ACATTATATTTCTATATTGA+CGG + contig580end:14661-14680 MsG0080048977.01.T01:intron 15.0%
!!! ATTATGCTTTTTTTTTTTGA+GGG - contig580end:9376-9395 MsG0080048977.01.T01:intergenic 15.0%
!!! ATTGAGTATTGTATTATTTT+AGG - contig580end:9118-9137 MsG0080048977.01.T01:intergenic 15.0%
!!! GTCAGTATTTTTTTATTTTA+GGG - contig580end:10561-10580 MsG0080048977.01.T01:intergenic 15.0%
!!! TGTCAGTATTTTTTTATTTT+AGG - contig580end:10562-10581 MsG0080048977.01.T01:intergenic 15.0%
!!! TGTTGATGAAAATTTTTATA+TGG - contig580end:8946-8965 MsG0080048977.01.T01:intergenic 15.0%
!!! TTGAGTATTGTATTATTTTA+GGG - contig580end:9117-9136 MsG0080048977.01.T01:intergenic 15.0%
!! ATAAAGGAAAATTATACATG+TGG + contig580end:14968-14987 MsG0080048977.01.T01:intron 20.0%
!! ATTATATATATTTCTTGTGG+GGG + contig580end:14399-14418 MsG0080048977.01.T01:CDS 20.0%
!! CAAAACTGTGAATATTTATA+AGG + contig580end:9074-9093 MsG0080048977.01.T01:intron 20.0%
!! TAAAAAATATGAAAACACAG+TGG + contig580end:12620-12639 MsG0080048977.01.T01:intron 20.0%
!! TAAAGGAAAATTATACATGT+GGG + contig580end:14969-14988 MsG0080048977.01.T01:intron 20.0%
!! TAATCTAAGTGTTAATTAAG+TGG - contig580end:9227-9246 MsG0080048977.01.T01:intergenic 20.0%
!! TAGATTATATAGTCTAATGA+CGG + contig580end:14541-14560 MsG0080048977.01.T01:intron 20.0%
!! TATATAATCTAGAGAATTCA+CGG - contig580end:14532-14551 MsG0080048977.01.T01:intergenic 20.0%
!! TCAAAGTCAGATTATAAAAT+AGG + contig580end:9158-9177 MsG0080048977.01.T01:intron 20.0%
!!! AATTTATAACAAGCACTTTT+TGG + contig580end:14935-14954 MsG0080048977.01.T01:intron 20.0%
!!! AATTTTTTAATGGAAGATGA+TGG + contig580end:15059-15078 MsG0080048977.01.T01:exon 20.0%
!!! ACTGTAATTTAGAATATCTT+AGG - contig580end:13567-13586 MsG0080048977.01.T01:intergenic 20.0%
!!! ATTAAAAAATTGACTTCAAC+AGG - contig580end:15050-15069 MsG0080048977.01.T01:intergenic 20.0%
!!! CAACTTAAAACTTTCTTTTT+TGG + contig580end:10502-10521 MsG0080048977.01.T01:intron 20.0%
!!! CTTACTTTAATGCATTTTTA+GGG + contig580end:10043-10062 MsG0080048977.01.T01:intron 20.0%
!!! GTTGATATAAATTTTTGACA+GGG - contig580end:8977-8996 MsG0080048977.01.T01:intergenic 20.0%
!!! TAAAACATTTTATCAGATGA+TGG + contig580end:9484-9503 MsG0080048977.01.T01:intron 20.0%
!!! TGTTGAAGTCAATTTTTTAA+TGG + contig580end:15049-15068 MsG0080048977.01.T01:exon 20.0%
!!! TGTTGATATAAATTTTTGAC+AGG - contig580end:8978-8997 MsG0080048977.01.T01:intergenic 20.0%
!!! TTAAAAAATTGACTTCAACA+GGG - contig580end:15049-15068 MsG0080048977.01.T01:intergenic 20.0%
! AAAGTGATAAAATGAAGTAC+TGG - contig580end:11924-11943 MsG0080048977.01.T01:intergenic 25.0%
! AAATAACTTCAACAAATGAC+AGG - contig580end:12838-12857 MsG0080048977.01.T01:intergenic 25.0%
! AAGTCAGATTATAAAATAGG+TGG + contig580end:9161-9180 MsG0080048977.01.T01:intron 25.0%
! AATAGTAATAACCATTGGTA+TGG + contig580end:12953-12972 MsG0080048977.01.T01:intron 25.0%
! AGAATGCATCAATGAATAAA+TGG + contig580end:15285-15304 MsG0080048977.01.T01:exon 25.0%
! ATAGGTTAATATTTCAAACG+AGG + contig580end:10935-10954 MsG0080048977.01.T01:intron 25.0%
! ATTAGATTGTAACAATGCAA+AGG - contig580end:11397-11416 MsG0080048977.01.T01:intergenic 25.0%
! CAAATTCTAACTATGAACTT+GGG + contig580end:14066-14085 MsG0080048977.01.T01:CDS 25.0%
! CAACTTAAAGACTTATTTCA+AGG + contig580end:11631-11650 MsG0080048977.01.T01:intron 25.0%
! CACTTGTAGTTATGAATTTA+AGG + contig580end:12799-12818 MsG0080048977.01.T01:intron 25.0%
! CAGGAATTTACAATTACATT+TGG + contig580end:14712-14731 MsG0080048977.01.T01:intron 25.0%
! CCATAGAAACTAATGTTATT+CGG - contig580end:11729-11748 MsG0080048977.01.T01:intergenic 25.0%
! CCTAAAAATGCATTAAAGTA+AGG - contig580end:10045-10064 MsG0080048977.01.T01:intergenic 25.0%
! CTTAAATTCATAACTACAAG+TGG - contig580end:12801-12820 MsG0080048977.01.T01:intergenic 25.0%
! CTTGATAAACACAATCAATT+TGG - contig580end:14740-14759 MsG0080048977.01.T01:intergenic 25.0%
! GCATTGTTACAATCTAATAA+CGG + contig580end:11399-11418 MsG0080048977.01.T01:intron 25.0%
! TAACCAAAACGGTTAATAAA+AGG + contig580end:12407-12426 MsG0080048977.01.T01:intron 25.0%
! TAGCTAATAGTAATAACCAT+TGG + contig580end:12948-12967 MsG0080048977.01.T01:intron 25.0%
! TAGGTCATATTCAATACTAT+CGG - contig580end:13693-13712 MsG0080048977.01.T01:intergenic 25.0%
! TGTGATTCATAAATTGTATC+TGG - contig580end:12090-12109 MsG0080048977.01.T01:intergenic 25.0%
! TGTTTATCAAGTTCATTATC+TGG + contig580end:14749-14768 MsG0080048977.01.T01:intron 25.0%
! TTATCGGATAAACGAAAATA+GGG - contig580end:12735-12754 MsG0080048977.01.T01:intergenic 25.0%
! TTGCGTTTAATAATGAAACA+CGG + contig580end:10965-10984 MsG0080048977.01.T01:intron 25.0%
! TTTAATAATGAAACACGGTT+TGG + contig580end:10970-10989 MsG0080048977.01.T01:intron 25.0%
! TTTATATAGTGCTTCAATCT+TGG + contig580end:14015-14034 MsG0080048977.01.T01:intron 25.0%
!! AATTTAGAATATCTTAGGAC+TGG - contig580end:13562-13581 MsG0080048977.01.T01:intergenic 25.0%
!! AGATTGAAGCACTATATAAA+TGG - contig580end:14015-14034 MsG0080048977.01.T01:intergenic 25.0%
!! CCTTACTTTAATGCATTTTT+AGG + contig580end:10042-10061 MsG0080048977.01.T01:intron 25.0%
!! GTAATTCTTTTACTTTGCAA+GGG - contig580end:13856-13875 MsG0080048977.01.T01:intergenic 25.0%
!! GTGTTGAAAAGATTGAATTT+TGG - contig580end:9734-9753 MsG0080048977.01.T01:intergenic 25.0%
!! TGAAAAGATTGAATTTTGGA+GGG - contig580end:9730-9749 MsG0080048977.01.T01:intergenic 25.0%
!! TTATAAAATAGGTGGATTCT+AGG + contig580end:9169-9188 MsG0080048977.01.T01:intron 25.0%
!! TTATATTTCTATATTGACGG+TGG + contig580end:14664-14683 MsG0080048977.01.T01:intron 25.0%
!! TTATGAATTTAAGGTAGCTT+GGG + contig580end:12808-12827 MsG0080048977.01.T01:intron 25.0%
!! TTGAAAAGATTGAATTTTGG+AGG - contig580end:9731-9750 MsG0080048977.01.T01:intergenic 25.0%
!! TTTAGAGTAGATTTAGTGAT+AGG - contig580end:11095-11114 MsG0080048977.01.T01:intergenic 25.0%
!!! AAGGTTTTATCAATTGCAAA+TGG + contig580end:15095-15114 MsG0080048977.01.T01:exon 25.0%
!!! ATACCACTTTTATACTTTTG+AGG - contig580end:10479-10498 MsG0080048977.01.T01:intergenic 25.0%
!!! ATTAACCGTTTTGGTTAATT+TGG - contig580end:12404-12423 MsG0080048977.01.T01:intergenic 25.0%
!!! TTTTAGTCTTTAGATGAGTA+AGG + contig580end:13471-13490 MsG0080048977.01.T01:intron 25.0%
AAAACCCTATAACTTCAAGA+TGG - contig580end:13455-13474 MsG0080048976.01.T01:intergenic 30.0%
AAACTGATTATGTTGGATGT+AGG + contig580end:13740-13759 MsG0080048977.01.T01:intron 30.0%
AACTGATTATGTTGGATGTA+GGG + contig580end:13741-13760 MsG0080048977.01.T01:intron 30.0%
AAGACTCTTGTGTAAAAAAC+AGG + contig580end:12467-12486 MsG0080048977.01.T01:intron 30.0%
ACCACTCTTCCAAATTAAAT+CGG - contig580end:11426-11445 MsG0080048977.01.T01:intergenic 30.0%
AGACTCTTGTGTAAAAAACA+GGG + contig580end:12468-12487 MsG0080048977.01.T01:intron 30.0%
AGATTTCAAATGGGATAGTT+GGG + contig580end:13050-13069 MsG0080048977.01.T01:intron 30.0%
ATAACTTCAAGATGGTATCA+AGG - contig580end:13447-13466 MsG0080048977.01.T01:intergenic 30.0%
ATACTATCAGAGAGAAAAGA+TGG + contig580end:13293-13312 MsG0080048977.01.T01:intron 30.0%
ATATGGTTCTCAAAAATGCA+TGG + contig580end:14576-14595 MsG0080048977.01.T01:intron 30.0%
ATCACTAATACATCACAACA+TGG + contig580end:13012-13031 MsG0080048977.01.T01:intron 30.0%
CAAATATAGTAACCTTGCAT+TGG + contig580end:10436-10455 MsG0080048977.01.T01:intron 30.0%
CATTAGTAACTAATAGAGAG+TGG + contig580end:11176-11195 MsG0080048977.01.T01:intron 30.0%
CTAAGTTATGAAGTTAGTGT+TGG + contig580end:11260-11279 MsG0080048977.01.T01:intron 30.0%
CTACATTTCACTATCTTGTT+TGG - contig580end:10640-10659 MsG0080048977.01.T01:intergenic 30.0%
CTTATCGGATAAACGAAAAT+AGG - contig580end:12736-12755 MsG0080048977.01.T01:intergenic 30.0%
GAAAAGATGGTCAAAATTTG+TGG + contig580end:13306-13325 MsG0080048977.01.T01:intron 30.0%
GAAATGTAGACACCAAATTT+CGG + contig580end:10651-10670 MsG0080048977.01.T01:intron 30.0%
GAATTTACCTGTTAATGCAA+GGG - contig580end:14183-14202 MsG0080048977.01.T01:intergenic 30.0%
GATACCATCTTGAAGTTATA+GGG + contig580end:13448-13467 MsG0080048977.01.T01:intron 30.0%
GATGAAAATAAAGTTTGCAG+GGG + contig580end:11748-11767 MsG0080048977.01.T01:intron 30.0%
GCAAATTCTAACTATGAACT+TGG + contig580end:14065-14084 MsG0080048977.01.T01:intron 30.0%
GGATGAAAATAAAGTTTGCA+GGG + contig580end:11747-11766 MsG0080048977.01.T01:intron 30.0%
GGTGATGAATAATTAGATCA+TGG - contig580end:9259-9278 MsG0080048977.01.T01:intergenic 30.0%
TAGAAATATAATGTGCAGAG+TGG - contig580end:14655-14674 MsG0080048977.01.T01:intergenic 30.0%
TAGGACCAAATTAACCAAAA+CGG + contig580end:12396-12415 MsG0080048977.01.T01:intron 30.0%
TAGTATATGTGTATGCTTCA+AGG + contig580end:10722-10741 MsG0080048977.01.T01:intron 30.0%
TATCGGATAAACGAAAATAG+GGG - contig580end:12734-12753 MsG0080048977.01.T01:intergenic 30.0%
TATGGCAGAAAATATAAGAC+AGG + contig580end:14852-14871 MsG0080048977.01.T01:intron 30.0%
TCTTCATTTGTATCAGATGA+CGG + contig580end:14273-14292 MsG0080048977.01.T01:intron 30.0%
TCTTGGAAAATTCACATTGT+TGG + contig580end:14032-14051 MsG0080048977.01.T01:intron 30.0%
TGAATTTACCTGTTAATGCA+AGG - contig580end:14184-14203 MsG0080048977.01.T01:intergenic 30.0%
TGATACCATCTTGAAGTTAT+AGG + contig580end:13447-13466 MsG0080048977.01.T01:intron 30.0%
TGGATGAAAATAAAGTTTGC+AGG + contig580end:11746-11765 MsG0080048977.01.T01:intron 30.0%
TTGACCAACGTATATTTCAT+GGG + contig580end:15228-15247 MsG0080048977.01.T01:exon 30.0%
TTGGTGGAAGAAAATAATCT+TGG + contig580end:13333-13352 MsG0080048977.01.T01:intron 30.0%
! AACACGGTTTGGAATTTATA+TGG + contig580end:10981-11000 MsG0080048977.01.T01:intron 30.0%
! AACATTTTGTGGAGGTTATT+GGG + contig580end:11451-11470 MsG0080048977.01.T01:intron 30.0%
! ACTCCTCAAAAGTATAAAAG+TGG + contig580end:10473-10492 MsG0080048977.01.T01:intron 30.0%
! ACTGAATCAGGTAATTTTGA+TGG + contig580end:11898-11917 MsG0080048977.01.T01:intron 30.0%
! CCGAATAACATTAGTTTCTA+TGG + contig580end:11726-11745 MsG0080048977.01.T01:intron 30.0%
! CTCTGAATTAGTCAGTTTTT+AGG + contig580end:10345-10364 MsG0080048977.01.T01:intron 30.0%
! GGTAATTCTTTTACTTTGCA+AGG - contig580end:13857-13876 MsG0080048977.01.T01:intergenic 30.0%
! GGTAGAAAGTACAAACTTAT+CGG - contig580end:12751-12770 MsG0080048977.01.T01:intergenic 30.0%
! GTTATGAATTTAAGGTAGCT+TGG + contig580end:12807-12826 MsG0080048977.01.T01:intron 30.0%
! TAACATTTTGTGGAGGTTAT+TGG + contig580end:11450-11469 MsG0080048977.01.T01:intron 30.0%
! TGAAAAAGCTCTTCTTTTTG+TGG + contig580end:15259-15278 MsG0080048977.01.T01:exon 30.0%
! TGTAGTGTTTGCTAAAATTG+CGG + contig580end:10801-10820 MsG0080048977.01.T01:intron 30.0%
!! AATAACGGACCGATTTAATT+TGG + contig580end:11414-11433 MsG0080048977.01.T01:intron 30.0%
!! ACAAAAAGAAGAGCTTTTTC+AGG - contig580end:15260-15279 MsG0080048977.01.T01:intergenic 30.0%
!! AGTTGATTTGTGTAACATTC+AGG - contig580end:9333-9352 MsG0080048977.01.T01:intergenic 30.0%
!! ATCTTCTAAAATCATCGACT+AGG + contig580end:13618-13637 MsG0080048977.01.T01:intron 30.0%
!! ATGAATTGATTGTTTTGCAC+AGG + contig580end:12126-12145 MsG0080048977.01.T01:intron 30.0%
!! CACTTTGAAACTGATTATGT+TGG + contig580end:13733-13752 MsG0080048977.01.T01:intron 30.0%
!! TTAATGGAAGATGATGGATT+AGG + contig580end:15065-15084 MsG0080048977.01.T01:exon 30.0%
!! TTTGGTCTCTAAAATGCTTA+AGG + contig580end:9000-9019 MsG0080048977.01.T01:intron 30.0%
!!! AAATGGATTGTGCTATTTTC+TGG - contig580end:13998-14017 MsG0080048977.01.T01:intergenic 30.0%
!!! TATTTTAGGGTTATGCTAAC+CGG - contig580end:10548-10567 MsG0080048977.01.T01:intergenic 30.0%
AAGACTATGCTAAGACTATG+TGG - contig580end:11494-11513 MsG0080048977.01.T01:intergenic 35.0%
AAGCTGTAGTTTACATGCAA+TGG - contig580end:11554-11573 MsG0080048977.01.T01:intergenic 35.0%
AAGCTTCAACAAAATCACAC+TGG - contig580end:10776-10795 MsG0080048977.01.T01:intergenic 35.0%
AATAAAGTTTGCAGGGGTTA+TGG + contig580end:11754-11773 MsG0080048977.01.T01:intron 35.0%
ACAGCATGCTAATTTCTTTG+AGG - contig580end:12772-12791 MsG0080048977.01.T01:intergenic 35.0%
ACTGATTATGTTGGATGTAG+GGG + contig580end:13742-13761 MsG0080048977.01.T01:intron 35.0%
AGACTATGCTAAGACTATGT+GGG - contig580end:11493-11512 MsG0080048977.01.T01:intergenic 35.0%
AGCCAAATTAAGGCTATGTA+TGG - contig580end:10288-10307 MsG0080048977.01.T01:intergenic 35.0%
ATCAAACACATTGCTACTAG+TGG + contig580end:11856-11875 MsG0080048977.01.T01:CDS 35.0%
ATTAAAGCTCTCACATATGC+AGG - contig580end:12540-12559 MsG0080048977.01.T01:intergenic 35.0%
CAAAATTTGTGGATGATTGG+TGG + contig580end:13317-13336 MsG0080048977.01.T01:intron 35.0%
CAATGAGTAAAATACGCACA+AGG - contig580end:12204-12223 MsG0080048977.01.T01:intergenic 35.0%
CAATGTAGTGTTAGAAGACA+TGG - contig580end:12055-12074 MsG0080048977.01.T01:intergenic 35.0%
CAGATTTCAAATGGGATAGT+TGG + contig580end:13049-13068 MsG0080048977.01.T01:intron 35.0%
CAGTGAGATAAACTGATGTA+AGG + contig580end:13229-13248 MsG0080048977.01.T01:intron 35.0%
CGAGTAATTCAAATAGCAAG+CGG + contig580end:14146-14165 MsG0080048977.01.T01:CDS 35.0%
CTTGACCAACGTATATTTCA+TGG + contig580end:15227-15246 MsG0080048977.01.T01:exon 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + contig580end:12473-12492 MsG0080048977.01.T01:intron 35.0%
GAAAGAAGTTAGATCTGATG+CGG - contig580end:9280-9299 MsG0080048977.01.T01:intergenic 35.0%
GACGGTCATTAGACTATATA+TGG + contig580end:14559-14578 MsG0080048977.01.T01:intron 35.0%
GACTTCACATTATCAAGATG+AGG - contig580end:9941-9960 MsG0080048977.01.T01:intergenic 35.0%
GATTTCAAATGGGATAGTTG+GGG + contig580end:13051-13070 MsG0080048977.01.T01:intron 35.0%
GATTTCATTTCTGTTTCCAG+TGG + contig580end:14226-14245 MsG0080048977.01.T01:intron 35.0%
GCTCAATTGAAGCCAAATTA+AGG - contig580end:10298-10317 MsG0080048977.01.T01:intergenic 35.0%
GGTCAAAATTTGTGGATGAT+TGG + contig580end:13314-13333 MsG0080048977.01.T01:intron 35.0%
GTAACAATGCAAAGGAATTG+AGG - contig580end:11389-11408 MsG0080048977.01.T01:intergenic 35.0%
GTAACATTCTCCAATGTGTT+TGG - contig580end:10862-10881 MsG0080048977.01.T01:intergenic 35.0%
GTACCATTATTGGAACATCT+AGG - contig580end:13712-13731 MsG0080048977.01.T01:intergenic 35.0%
GTGTTAATTAAGTGGTACAC+TGG - contig580end:9219-9238 MsG0080048977.01.T01:intergenic 35.0%
GTTAAAACGATACAAACCAC+TGG - contig580end:14245-14264 MsG0080048977.01.T01:intergenic 35.0%
TAGAAGACATGGAAAAGCAA+TGG - contig580end:12044-12063 MsG0080048977.01.T01:intergenic 35.0%
TAGTTGTCCAATGTGCAATT+TGG - contig580end:13077-13096 MsG0080048977.01.T01:intergenic 35.0%
TATGGCATTCAGTGCATATT+TGG - contig580end:11146-11165 MsG0080048977.01.T01:intergenic 35.0%
TATTAAAAAAAAGGGCAGCC+CGG - contig580end:12566-12585 MsG0080048977.01.T01:intergenic 35.0%
TCAAGATGAGGATTCAAAGT+AGG - contig580end:9929-9948 MsG0080048977.01.T01:intergenic 35.0%
TCAGTGCATATTTGGATACA+CGG - contig580end:11138-11157 MsG0080048977.01.T01:intergenic 35.0%
TGACCTAGATGTTCCAATAA+TGG + contig580end:13706-13725 MsG0080048977.01.T01:intron 35.0%
TGATTCACTACTACCATTCT+TGG - contig580end:10913-10932 MsG0080048977.01.T01:intergenic 35.0%
TGCATGTAAACTACAGCTTT+CGG + contig580end:11555-11574 MsG0080048977.01.T01:intron 35.0%
TGCGTACAATACACCAAAAT+GGG + contig580end:12497-12516 MsG0080048977.01.T01:intron 35.0%
TGCTTAAGGAAAATGTCACA+AGG + contig580end:9014-9033 MsG0080048977.01.T01:intron 35.0%
TGGTAGTAGTGAATCATGAT+AGG + contig580end:10917-10936 MsG0080048977.01.T01:intron 35.0%
TTAAAGCTCTCACATATGCA+GGG - contig580end:12539-12558 MsG0080048977.01.T01:intergenic 35.0%
TTCAAAGTGCGTACCATTAT+TGG - contig580end:13722-13741 MsG0080048977.01.T01:intergenic 35.0%
TTCACCCATGAAATATACGT+TGG - contig580end:15235-15254 MsG0080048977.01.T01:intergenic 35.0%
TTCAGTGATGATTATGGATC+TGG + contig580end:14773-14792 MsG0080048977.01.T01:intron 35.0%
TTCCTTAACCATTGCTTTGA+GGG - contig580end:10415-10434 MsG0080048977.01.T01:intergenic 35.0%
TTGCAGAGTTCCATATCTTA+AGG + contig580end:13373-13392 MsG0080048977.01.T01:intron 35.0%
TTTCCTTAACCATTGCTTTG+AGG - contig580end:10416-10435 MsG0080048977.01.T01:intergenic 35.0%
! AACTATGTAGCACCGAAATT+TGG - contig580end:10666-10685 MsG0080048977.01.T01:intergenic 35.0%
! ACATTTTGTGGAGGTTATTG+GGG + contig580end:11452-11471 MsG0080048977.01.T01:intron 35.0%
! AGTGGTAGCTTAACATTTTG+TGG + contig580end:11440-11459 MsG0080048977.01.T01:intron 35.0%
! ATGAGCCAAAACGTTTTTGT+GGG + contig580end:13168-13187 MsG0080048977.01.T01:intron 35.0%
! ATGTAGGGGAGCTTTATATA+TGG + contig580end:13756-13775 MsG0080048977.01.T01:intron 35.0%
! CAACTATCCCATTTGAAATC+TGG - contig580end:13051-13070 MsG0080048977.01.T01:intergenic 35.0%
! CATTCTTGTTTGGTTGTTGA+TGG + contig580end:9833-9852 MsG0080048977.01.T01:CDS 35.0%
! GTCCATACATAGCCTTAATT+TGG + contig580end:10283-10302 MsG0080048977.01.T01:intron 35.0%
! GTGCCTTTTATTAACCGTTT+TGG - contig580end:12413-12432 MsG0080048977.01.T01:intergenic 35.0%
! TATAGCCCACAAAAACGTTT+TGG - contig580end:13176-13195 MsG0080048977.01.T01:intergenic 35.0%
! TATCTTAGCTTGACCAAGAA+TGG + contig580end:10897-10916 MsG0080048977.01.T01:intron 35.0%
! TATGAGCCAAAACGTTTTTG+TGG + contig580end:13167-13186 MsG0080048977.01.T01:intron 35.0%
! TCTGGTTTCAGTGATGATTA+TGG + contig580end:14767-14786 MsG0080048977.01.T01:intron 35.0%
! TGTAGGGGAGCTTTATATAT+GGG + contig580end:13757-13776 MsG0080048977.01.T01:intron 35.0%
!! AACGTTTTTGTGGGCTATAA+AGG + contig580end:13177-13196 MsG0080048977.01.T01:intron 35.0%
!! ACCGATTTAATTTGGAAGAG+TGG + contig580end:11422-11441 MsG0080048977.01.T01:intron 35.0%
!! GAGACTATCTTGTGGTTTTA+TGG + contig580end:14834-14853 MsG0080048977.01.T01:intron 35.0%
!! TATTCCCTAGGTTGGTAAAA+GGG + contig580end:11818-11837 MsG0080048977.01.T01:CDS 35.0%
!! TTTTGGCACTGAACAGATAA+AGG + contig580end:14952-14971 MsG0080048977.01.T01:intron 35.0%
!!! GTCTTGTCTTTTTTCTTGCT+TGG + contig580end:11288-11307 MsG0080048977.01.T01:intron 35.0%
!!! TGGGCTTTTTCATTCTTGTT+TGG + contig580end:9823-9842 MsG0080048977.01.T01:CDS 35.0%
!!! TGTAAGCTTGTTGGTTTTTC+CGG + contig580end:14602-14621 MsG0080048977.01.T01:intron 35.0%
AAACAACATCAGGACAGACA+AGG + contig580end:13102-13121 MsG0080048977.01.T01:intron 40.0%
AACAGTGACAAGACAGATCA+TGG + contig580end:13409-13428 MsG0080048977.01.T01:intron 40.0%
AACTAGTGCCAAACAACATC+AGG + contig580end:13092-13111 MsG0080048977.01.T01:intron 40.0%
AATGCACAAGTTCCAATGCA+AGG - contig580end:10451-10470 MsG0080048977.01.T01:intergenic 40.0%
AATGTGAAGTCTGTTGCTCT+TGG + contig580end:9950-9969 MsG0080048977.01.T01:CDS 40.0%
AATTAAGTGGTACACTGGTG+AGG - contig580end:9214-9233 MsG0080048977.01.T01:intergenic 40.0%
ACAAGGCTAAAGTACAGTTG+GGG + contig580end:13119-13138 MsG0080048977.01.T01:intron 40.0%
ACAAGGGCCAGATTTCAAAT+GGG + contig580end:13041-13060 MsG0080048977.01.T01:intron 40.0%
ACTGACACGTTTAACCTCTA+AGG + contig580end:10161-10180 MsG0080048977.01.T01:intron 40.0%
ACTTCAAGATGGTATCAAGG+AGG - contig580end:13444-13463 MsG0080048977.01.T01:intergenic 40.0%
AGAAAAGATCATGCGAAACG+AGG + contig580end:12864-12883 MsG0080048977.01.T01:intron 40.0%
AGACAAGGCTAAAGTACAGT+TGG + contig580end:13117-13136 MsG0080048977.01.T01:intron 40.0%
AGTATGCATCTGTCTTGTCT+AGG + contig580end:10216-10235 MsG0080048977.01.T01:intron 40.0%
ATCTAGAGAATTCACGGTGA+AGG - contig580end:14526-14545 MsG0080048977.01.T01:intergenic 40.0%
ATCTGTAACATTCAGAAGCG+GGG - contig580end:9310-9329 MsG0080048977.01.T01:intergenic 40.0%
ATGGCTGCAAACTTTGTGTA+TGG - contig580end:11535-11554 MsG0080048977.01.T01:intergenic 40.0%
ATGTAAGGCCTCTAAACTGA+TGG + contig580end:13244-13263 MsG0080048977.01.T01:intron 40.0%
ATTAAGTGGTACACTGGTGA+GGG - contig580end:9213-9232 MsG0080048977.01.T01:intergenic 40.0%
CAACTATATCCATGCCAACA+CGG - contig580end:15205-15224 MsG0080048977.01.T01:intergenic 40.0%
CACAACATGGCACATTACAA+GGG + contig580end:13025-13044 MsG0080048977.01.T01:intron 40.0%
CACTGTGAATCCAAACACAT+TGG + contig580end:10849-10868 MsG0080048977.01.T01:intron 40.0%
CAGTGCATATTTGGATACAC+GGG - contig580end:11137-11156 MsG0080048977.01.T01:intergenic 40.0%
CATATTTGGATACACGGGAT+TGG - contig580end:11132-11151 MsG0080048977.01.T01:intergenic 40.0%
CCTGACTCATGCCATATATT+GGG - contig580end:14696-14715 MsG0080048977.01.T01:intergenic 40.0%
CGACTAATGTTGGTATCTTC+TGG - contig580end:14359-14378 MsG0080048977.01.T01:intergenic 40.0%
CGTACAATACACCAAAATGG+GGG + contig580end:12499-12518 MsG0080048977.01.T01:intron 40.0%
CTAAAAGTAGCACCAAGAAC+CGG - contig580end:14624-14643 MsG0080048977.01.T01:intergenic 40.0%
CTGACACGTTTAACCTCTAA+GGG + contig580end:10162-10181 MsG0080048977.01.T01:intron 40.0%
CTGCGTACAATACACCAAAA+TGG + contig580end:12496-12515 MsG0080048977.01.T01:intron 40.0%
CTGCTGAGTTCCTTAAGATA+TGG - contig580end:13386-13405 MsG0080048977.01.T01:intergenic 40.0%
CTGTCAATGAAGAAATCTCC+AGG - contig580end:15177-15196 MsG0080048977.01.T01:intergenic 40.0%
GAAGATACCAACATTAGTCG+AGG + contig580end:14359-14378 MsG0080048977.01.T01:CDS 40.0%
GAATTACTCGAACCTTCTCA+AGG - contig580end:14136-14155 MsG0080048977.01.T01:intergenic 40.0%
GACAAGGCTAAAGTACAGTT+GGG + contig580end:13118-13137 MsG0080048977.01.T01:intron 40.0%
GACATGGAAAAGCAATGGTT+TGG - contig580end:12039-12058 MsG0080048977.01.T01:intergenic 40.0%
GATCTGTAACATTCAGAAGC+GGG - contig580end:9311-9330 MsG0080048977.01.T01:intergenic 40.0%
GCAAACTTTGTGTATGGAAG+TGG - contig580end:11529-11548 MsG0080048977.01.T01:intergenic 40.0%
GCGTACAATACACCAAAATG+GGG + contig580end:12498-12517 MsG0080048977.01.T01:intron 40.0%
GGATCTGTAACATTCAGAAG+CGG - contig580end:9312-9331 MsG0080048977.01.T01:intergenic 40.0%
GTAAGATGATTCATCTCACC+TGG + contig580end:14445-14464 MsG0080048977.01.T01:intron 40.0%
GTAATTCAAATAGCAAGCGG+AGG + contig580end:14149-14168 MsG0080048977.01.T01:CDS 40.0%
GTACAATACACCAAAATGGG+GGG + contig580end:12500-12519 MsG0080048977.01.T01:intron 40.0%
GTTTGGATTCACAGTGAGAT+TGG - contig580end:10845-10864 MsG0080048977.01.T01:intergenic 40.0%
TACAAGGGCCAGATTTCAAA+TGG + contig580end:13040-13059 MsG0080048977.01.T01:intron 40.0%
TATATATGGGGTCGAGAAGA+AGG + contig580end:13770-13789 MsG0080048977.01.T01:CDS 40.0%
TATCACTCCCTTGCATTAAC+AGG + contig580end:14173-14192 MsG0080048977.01.T01:CDS 40.0%
TATGCTAAGACTATGTGGGA+TGG - contig580end:11489-11508 MsG0080048977.01.T01:intergenic 40.0%
TATGGATCTGGAAACTAGAC+TGG + contig580end:14785-14804 MsG0080048977.01.T01:intron 40.0%
TATGTGTATGCTTCAAGGAG+CGG + contig580end:10727-10746 MsG0080048977.01.T01:intron 40.0%
TCAACCTTCCATCAGTTTAG+AGG - contig580end:13255-13274 MsG0080048977.01.T01:intergenic 40.0%
TCACAACATGGCACATTACA+AGG + contig580end:13024-13043 MsG0080048977.01.T01:intron 40.0%
TCCTGACTCATGCCATATAT+TGG - contig580end:14697-14716 MsG0080048977.01.T01:intergenic 40.0%
TCTAACTATGAACTTGGGAG+AGG + contig580end:14071-14090 MsG0080048977.01.T01:CDS 40.0%
TGCATATCGTAAGATATGCC+AGG - contig580end:14466-14485 MsG0080048977.01.T01:intergenic 40.0%
TGGACACTCAGTATACACAA+GGG + contig580end:11792-11811 MsG0080048977.01.T01:CDS 40.0%
TGGAGAAGGAGGAATATAAG+CGG - contig580end:9556-9575 MsG0080048977.01.T01:intergenic 40.0%
TGTAAAAACTTCACCAGCAG+AGG - contig580end:9999-10018 MsG0080048977.01.T01:intergenic 40.0%
TTATCATTTCGCGTAGACAC+TGG + contig580end:10131-10150 MsG0080048977.01.T01:intron 40.0%
TTCCCTCAAAGCTAAACACA+TGG - contig580end:15132-15151 MsG0080048977.01.T01:intergenic 40.0%
TTGGACACTCAGTATACACA+AGG + contig580end:11791-11810 MsG0080048977.01.T01:CDS 40.0%
TTGTCTGTCCTGATGTTGTT+TGG - contig580end:13103-13122 MsG0080048977.01.T01:intergenic 40.0%
TTTCCTTAACCATTGCCTAC+CGG + contig580end:10526-10545 MsG0080048977.01.T01:intron 40.0%
! AAATTGACTTCAACAGGGCA+TGG - contig580end:15044-15063 MsG0080048977.01.T01:intergenic 40.0%
! ACTGTCATATCCTCCTTTTG+GGG - contig580end:13213-13232 MsG0080048977.01.T01:intergenic 40.0%
! AGTCTGTAATTTTGTGCAGG+CGG + contig580end:12653-12672 MsG0080048977.01.T01:intron 40.0%
! ATGTGAGAGCTTTAATGCAC+CGG + contig580end:12544-12563 MsG0080048977.01.T01:intron 40.0%
! CACAGTCTGTAATTTTGTGC+AGG + contig580end:12650-12669 MsG0080048977.01.T01:intron 40.0%
! CACTGTCATATCCTCCTTTT+GGG - contig580end:13214-13233 MsG0080048977.01.T01:intergenic 40.0%
! CATTTTGTGGAGGTTATTGG+GGG + contig580end:11453-11472 MsG0080048977.01.T01:intron 40.0%
! CTGCTGGTGAAGTTTTTACA+TGG + contig580end:9999-10018 MsG0080048977.01.T01:CDS 40.0%
! GGTAGCTTAACATTTTGTGG+AGG + contig580end:11443-11462 MsG0080048977.01.T01:intron 40.0%
! GTAGGGGAGCTTTATATATG+GGG + contig580end:13758-13777 MsG0080048977.01.T01:intron 40.0%
! TAACCTCTAAGGGTTGACTT+GGG + contig580end:10172-10191 MsG0080048977.01.T01:intron 40.0%
! TCACTGTCATATCCTCCTTT+TGG - contig580end:13215-13234 MsG0080048977.01.T01:intergenic 40.0%
! TCTTGTTTGGTTGTTGATGG+TGG + contig580end:9836-9855 MsG0080048977.01.T01:CDS 40.0%
! TGACATTTTGCATAGTCACC+AGG + contig580end:10577-10596 MsG0080048977.01.T01:intron 40.0%
! TGACTTGGGGATAAAGGATT+GGG + contig580end:10186-10205 MsG0080048977.01.T01:intron 40.0%
! TTAACCTCTAAGGGTTGACT+TGG + contig580end:10171-10190 MsG0080048977.01.T01:intron 40.0%
! TTCAATCTTTTCAACACCCC+CGG + contig580end:9737-9756 MsG0080048977.01.T01:CDS 40.0%
!! AATAGGTGGATTCTAGGATG+AGG + contig580end:9175-9194 MsG0080048977.01.T01:intron 40.0%
!! ATAGGTGGATTCTAGGATGA+GGG + contig580end:9176-9195 MsG0080048977.01.T01:intron 40.0%
!! ATGCCATGTGTTTAGCTTTG+AGG + contig580end:15126-15145 MsG0080048977.01.T01:exon 40.0%
!! ATTCCCTAGGTTGGTAAAAG+GGG + contig580end:11819-11838 MsG0080048977.01.T01:CDS 40.0%
!! CACTATCTTGTTTGGTGTCT+AGG - contig580end:10632-10651 MsG0080048977.01.T01:intergenic 40.0%
!! CTATTCCCTAGGTTGGTAAA+AGG + contig580end:11817-11836 MsG0080048977.01.T01:CDS 40.0%
!! CTTGTTTGGTTGTTGATGGT+GGG + contig580end:9837-9856 MsG0080048977.01.T01:CDS 40.0%
!! GGTGGGTTTTGACAAAATCA+CGG + contig580end:10748-10767 MsG0080048977.01.T01:intron 40.0%
!! TGAATTTTGGAGGGAGAAGT+AGG - contig580end:9721-9740 MsG0080048977.01.T01:intergenic 40.0%
!! TGATGGATTAGGATCACACA+AGG + contig580end:15076-15095 MsG0080048977.01.T01:exon 40.0%
!! TGCCATGTGTTTAGCTTTGA+GGG + contig580end:15127-15146 MsG0080048977.01.T01:exon 40.0%
!! TTGACTTGGGGATAAAGGAT+TGG + contig580end:10185-10204 MsG0080048977.01.T01:intron 40.0%
!!! AGAGTGGCAGAGTTTTAGAA+AGG + contig580end:11192-11211 MsG0080048977.01.T01:intron 40.0%
!!! TTGTTGGTTTTTCCGGTTCT+TGG + contig580end:14609-14628 MsG0080048977.01.T01:intron 40.0%
AAAGTTTGCAGGGGTTATGG+TGG + contig580end:11757-11776 MsG0080048977.01.T01:intron 45.0%
AAATGCCAGTGATTCGCAGT+TGG + contig580end:14992-15011 MsG0080048977.01.T01:exon 45.0%
AACTAGTGCCCTCAAAGCAA+TGG + contig580end:10404-10423 MsG0080048977.01.T01:intron 45.0%
AAGGCCTCTAAACTGATGGA+AGG + contig580end:13248-13267 MsG0080048977.01.T01:intron 45.0%
AATGCCAGTGATTCGCAGTT+GGG + contig580end:14993-15012 MsG0080048977.01.T01:exon 45.0%
ACAATCCAACTCCTCTCATG+GGG + contig580end:9626-9645 MsG0080048977.01.T01:CDS 45.0%
ACCATTGGTATGGCTCACAA+TGG + contig580end:12963-12982 MsG0080048977.01.T01:intron 45.0%
AGAAGAAGGAGAAGGTCGAT+TGG + contig580end:13784-13803 MsG0080048977.01.T01:CDS 45.0%
AGTGACAAGACAGATCATGG+AGG + contig580end:13412-13431 MsG0080048977.01.T01:intron 45.0%
ATCTGTCTTGTCTAGGTCTC+TGG + contig580end:10223-10242 MsG0080048977.01.T01:intron 45.0%
CAACAATAAAGGGGTGGAAG+TGG + contig580end:9784-9803 MsG0080048977.01.T01:CDS 45.0%
CAAGACAGATGCATACTCCA+AGG - contig580end:10213-10232 MsG0080048977.01.T01:intergenic 45.0%
CACAATCCAACTCCTCTCAT+GGG + contig580end:9625-9644 MsG0080048977.01.T01:CDS 45.0%
CATTGACAGTAATGCCGTGT+TGG + contig580end:15188-15207 MsG0080048977.01.T01:exon 45.0%
CCATTGGTATGGCTCACAAT+GGG + contig580end:12964-12983 MsG0080048977.01.T01:intron 45.0%
CCCAATATATGGCATGAGTC+AGG + contig580end:14693-14712 MsG0080048977.01.T01:intron 45.0%
CTGAGGGGAGCAACAATAAA+GGG + contig580end:9774-9793 MsG0080048977.01.T01:CDS 45.0%
CTTGGGAGAGGTGATAGAAT+TGG + contig580end:14083-14102 MsG0080048977.01.T01:CDS 45.0%
GAAACAGCAGCAACAGAGAA+AGG - contig580end:13878-13897 MsG0080048977.01.T01:intergenic 45.0%
GAAGAAGGAGAAGGTCGATT+GGG + contig580end:13785-13804 MsG0080048977.01.T01:CDS 45.0%
GCATGGCAATGTAAGCTTGT+TGG + contig580end:14593-14612 MsG0080048977.01.T01:intron 45.0%
GCTATAGCCTCGACTAATGT+TGG - contig580end:14369-14388 MsG0080048977.01.T01:intergenic 45.0%
GTTGATTATGTCAGCTGTCC+TGG + contig580end:15156-15175 MsG0080048977.01.T01:exon 45.0%
TAACCGGTAGGCAATGGTTA+AGG - contig580end:10532-10551 MsG0080048977.01.T01:intergenic 45.0%
TAAGTCCACCTGCATGATCT+GGG - contig580end:13829-13848 MsG0080048977.01.T01:intergenic 45.0%
TCATGCCATATATTGGGCAG+TGG - contig580end:14690-14709 MsG0080048977.01.T01:intergenic 45.0%
TGAAGTCTGTTGCTCTTGGT+GGG + contig580end:9954-9973 MsG0080048977.01.T01:CDS 45.0%
TGAGGGGAGCAACAATAAAG+GGG + contig580end:9775-9794 MsG0080048977.01.T01:CDS 45.0%
TGCCCTCAAAGCAATGGTTA+AGG + contig580end:10410-10429 MsG0080048977.01.T01:intron 45.0%
TGGAAGTGGGTATTTCGTGT+GGG + contig580end:9804-9823 MsG0080048977.01.T01:CDS 45.0%
TTAGGGTTATGCTAACCGGT+AGG - contig580end:10544-10563 MsG0080048977.01.T01:intergenic 45.0%
TTATGCTAACCGGTAGGCAA+TGG - contig580end:10538-10557 MsG0080048977.01.T01:intergenic 45.0%
TTCAATTGAGCCTCTGCTAG+TGG + contig580end:10307-10326 MsG0080048977.01.T01:intron 45.0%
! ATGACGGCAAAGTGCTTTCA+TGG + contig580end:14289-14308 MsG0080048977.01.T01:CDS 45.0%
! ATGCATTAGTTTCCCCTGTG+GGG - contig580end:12683-12702 MsG0080048977.01.T01:intergenic 45.0%
! CATGCATTAGTTTCCCCTGT+GGG - contig580end:12684-12703 MsG0080048977.01.T01:intergenic 45.0%
! CTGTCATATCCTCCTTTTGG+GGG - contig580end:13212-13231 MsG0080048977.01.T01:intergenic 45.0%
! GAGGTGATAGAATTGGTGGT+TGG + contig580end:14090-14109 MsG0080048977.01.T01:CDS 45.0%
! GTCAGTCTGAGACTATCTTG+TGG + contig580end:14826-14845 MsG0080048977.01.T01:intron 45.0%
! TCAATCTTTTCAACACCCCC+GGG + contig580end:9738-9757 MsG0080048977.01.T01:CDS 45.0%
! TGACGGCAAAGTGCTTTCAT+GGG + contig580end:14290-14309 MsG0080048977.01.T01:CDS 45.0%
! TGTGAGAGCTTTAATGCACC+GGG + contig580end:12545-12564 MsG0080048977.01.T01:intron 45.0%
! TTGTGGGGGATTTTTCACAC+TGG + contig580end:13898-13917 MsG0080048977.01.T01:CDS 45.0%
! TTTGGGGTAAAGGTGATGGT+GGG + contig580end:9867-9886 MsG0080048977.01.T01:CDS 45.0%
!! AAAGGTGATGGTGGGAGATT+AGG + contig580end:9875-9894 MsG0080048977.01.T01:CDS 45.0%
!! AACCTCTAAGGGTTGACTTG+GGG + contig580end:10173-10192 MsG0080048977.01.T01:intron 45.0%
!! AAGGGTTGACTTGGGGATAA+AGG + contig580end:10180-10199 MsG0080048977.01.T01:intron 45.0%
!! CTGTTGCTGCTGTTTCTTGT+GGG + contig580end:13882-13901 MsG0080048977.01.T01:CDS 45.0%
!! TCTGTTGCTGCTGTTTCTTG+TGG + contig580end:13881-13900 MsG0080048977.01.T01:CDS 45.0%
!! TGTTGCTGCTGTTTCTTGTG+GGG + contig580end:13883-13902 MsG0080048977.01.T01:CDS 45.0%
!! TTTCACACTGGCATTGACAG+AGG + contig580end:13910-13929 MsG0080048977.01.T01:CDS 45.0%
!! TTTTGGAGGGAGAAGTAGGT+TGG - contig580end:9717-9736 MsG0080048977.01.T01:intergenic 45.0%
!! CTTTAAATATATTAAAAAAA+AGG - contig580end:12575-12594 MsG0080048977.01.T01:intergenic 5.0%
!!! TTTTTTTTTTATTTATTATC+TGG - contig580end:10371-10390 MsG0080048977.01.T01:intergenic 5.0%
AAAGGGGTGGAAGTGGAAGT+GGG + contig580end:9791-9810 MsG0080048977.01.T01:CDS 50.0%
AACTCCCAACTGCGAATCAC+TGG - contig580end:15000-15019 MsG0080048977.01.T01:intergenic 50.0%
AAGACAGCACTTCTTGCCAC+CGG - contig580end:10257-10276 MsG0080048977.01.T01:intergenic 50.0%
AAGGGAGCTATTCCCTAGGT+TGG + contig580end:11810-11829 MsG0080048977.01.T01:CDS 50.0%
ACACAAGGGAGCTATTCCCT+AGG + contig580end:11806-11825 MsG0080048977.01.T01:CDS 50.0%
ACATATGCAGGGTCTGGGAA+TGG - contig580end:12528-12547 MsG0080048977.01.T01:intergenic 50.0%
ACCTTCTCAAGGCTAGGTAC+TGG - contig580end:14125-14144 MsG0080048977.01.T01:intergenic 50.0%
ACTCGAACCTTCTCAAGGCT+AGG - contig580end:14131-14150 MsG0080048977.01.T01:intergenic 50.0%
ACTGCGGCAGTAACTGAATC+AGG + contig580end:11886-11905 MsG0080048977.01.T01:CDS 50.0%
AGAGGAGTTGGATTGTGGTG+GGG - contig580end:9622-9641 MsG0080048977.01.T01:intergenic 50.0%
AGGAAGGACAACTGTGGAAC+TGG + contig580end:13930-13949 MsG0080048977.01.T01:CDS 50.0%
AGGCTATTGAGTCCCCCAAA+AGG + contig580end:13197-13216 MsG0080048977.01.T01:intron 50.0%
ATCCCCAAGTCAACCCTTAG+AGG - contig580end:10178-10197 MsG0080048977.01.T01:intergenic 50.0%
ATTCGCAGTTGGGAGTTCCT+GGG + contig580end:15003-15022 MsG0080048977.01.T01:exon 50.0%
ATTGAGCCTCTGCTAGTGGA+CGG + contig580end:10311-10330 MsG0080048977.01.T01:intron 50.0%
CATATGCAGGGTCTGGGAAT+GGG - contig580end:12527-12546 MsG0080048977.01.T01:intergenic 50.0%
CCACAATCCAACTCCTCTCA+TGG + contig580end:9624-9643 MsG0080048977.01.T01:CDS 50.0%
CCATGAGAGGAGTTGGATTG+TGG - contig580end:9627-9646 MsG0080048977.01.T01:intergenic 50.0%
CCCATTGTGAGCCATACCAA+TGG - contig580end:12967-12986 MsG0080048977.01.T01:intergenic 50.0%
CCTGAGGGGAGCAACAATAA+AGG + contig580end:9773-9792 MsG0080048977.01.T01:CDS 50.0%
CCTTTATTGTTGCTCCCCTC+AGG - contig580end:9776-9795 MsG0080048977.01.T01:intergenic 50.0%
CTAAGTCCACCTGCATGATC+TGG - contig580end:13830-13849 MsG0080048977.01.T01:intergenic 50.0%
CTATTGAGTCCCCCAAAAGG+AGG + contig580end:13200-13219 MsG0080048977.01.T01:intron 50.0%
CTCTCACATATGCAGGGTCT+GGG - contig580end:12533-12552 MsG0080048977.01.T01:intergenic 50.0%
GAAGGACAACTGTGGAACTG+GGG + contig580end:13932-13951 MsG0080048977.01.T01:CDS 50.0%
GAGAGGAGTTGGATTGTGGT+GGG - contig580end:9623-9642 MsG0080048977.01.T01:intergenic 50.0%
GGAAGGACAACTGTGGAACT+GGG + contig580end:13931-13950 MsG0080048977.01.T01:CDS 50.0%
GGGAGAGGTGATAGAATTGG+TGG + contig580end:14086-14105 MsG0080048977.01.T01:CDS 50.0%
GGGATAAAGGATTGGGACCT+TGG + contig580end:10193-10212 MsG0080048977.01.T01:intron 50.0%
GTGAAGTCTGTTGCTCTTGG+TGG + contig580end:9953-9972 MsG0080048977.01.T01:CDS 50.0%
GTGCAATGTCTTGTCTTGCC+TGG - contig580end:10598-10617 MsG0080048977.01.T01:intergenic 50.0%
GTGGAAGTGGGTATTTCGTG+TGG + contig580end:9803-9822 MsG0080048977.01.T01:CDS 50.0%
GTTGGGGCCAAATTGCACAT+TGG + contig580end:13067-13086 MsG0080048977.01.T01:intron 50.0%
TAAAGGGGTGGAAGTGGAAG+TGG + contig580end:9790-9809 MsG0080048977.01.T01:CDS 50.0%
TAAAGTACAGTTGGGGCTGG+TGG + contig580end:13126-13145 MsG0080048977.01.T01:intron 50.0%
TACTAGTGGAGCGCATACTG+CGG + contig580end:11870-11889 MsG0080048977.01.T01:CDS 50.0%
TATGGCTCACAATGGGAGGT+TGG + contig580end:12971-12990 MsG0080048977.01.T01:intron 50.0%
TGACAGAGGAAGGACAACTG+TGG + contig580end:13924-13943 MsG0080048977.01.T01:CDS 50.0%
TGAGAGGAGTTGGATTGTGG+TGG - contig580end:9624-9643 MsG0080048977.01.T01:intergenic 50.0%
TGTAACATTCAGAAGCGGGG+TGG - contig580end:9307-9326 MsG0080048977.01.T01:intergenic 50.0%
TGTATGCTTCAAGGAGCGGT+GGG + contig580end:10731-10750 MsG0080048977.01.T01:intron 50.0%
TTGGTATGGCTCACAATGGG+AGG + contig580end:12967-12986 MsG0080048977.01.T01:intron 50.0%
! AAAGTACAGTTGGGGCTGGT+GGG + contig580end:13127-13146 MsG0080048977.01.T01:intron 50.0%
! AAAGTGCTTTCATGGGGCCA+TGG + contig580end:14297-14316 MsG0080048977.01.T01:CDS 50.0%
! ACAGTAATGCCGTGTTGGCA+TGG + contig580end:15193-15212 MsG0080048977.01.T01:exon 50.0%
! AGGCCCCTTTTACCAACCTA+GGG - contig580end:11825-11844 MsG0080048977.01.T01:intergenic 50.0%
! AGTTGGATTGTGGTGGGGTT+GGG - contig580end:9617-9636 MsG0080048977.01.T01:intergenic 50.0%
! GACGGCAAAGTGCTTTCATG+GGG + contig580end:14291-14310 MsG0080048977.01.T01:CDS 50.0%
! GCAGGGGTTATGGTGGTTTT+GGG + contig580end:11764-11783 MsG0080048977.01.T01:intron 50.0%
! GCATGCATTAGTTTCCCCTG+TGG - contig580end:12685-12704 MsG0080048977.01.T01:intergenic 50.0%
! GTAGAGTGTGGAGGTTTTCG+TGG - contig580end:9582-9601 MsG0080048977.01.T01:intergenic 50.0%
! GTTTGGGGTAAAGGTGATGG+TGG + contig580end:9866-9885 MsG0080048977.01.T01:CDS 50.0%
! TAGGTCTCTGGTTCGAATCC+CGG + contig580end:10235-10254 MsG0080048977.01.T01:intron 50.0%
! TGCAGGGGTTATGGTGGTTT+TGG + contig580end:11763-11782 MsG0080048977.01.T01:intron 50.0%
! TGCATTAGTTTCCCCTGTGG+GGG - contig580end:12682-12701 MsG0080048977.01.T01:intergenic 50.0%
! TGGGTTTGGGGTAAAGGTGA+TGG + contig580end:9863-9882 MsG0080048977.01.T01:CDS 50.0%
!! ACACTGGCATTGACAGAGGA+AGG + contig580end:13914-13933 MsG0080048977.01.T01:CDS 50.0%
!! ACCAGTACCTAGCCTTGAGA+AGG + contig580end:14121-14140 MsG0080048977.01.T01:CDS 50.0%
!! AGTAGGTTGGTGACTGGAGA+TGG - contig580end:9704-9723 MsG0080048977.01.T01:intergenic 50.0%
!! CAGGGGTTATGGTGGTTTTG+GGG + contig580end:11765-11784 MsG0080048977.01.T01:intron 50.0%
!! CATGGTGGACAAGGTCAGTT+GGG + contig580end:14315-14334 MsG0080048977.01.T01:CDS 50.0%
!! GATGGTGGGAGATTAGGCTT+AGG + contig580end:9881-9900 MsG0080048977.01.T01:CDS 50.0%
!! GGTTGTTGATGGTGGGCTTT+GGG + contig580end:9844-9863 MsG0080048977.01.T01:CDS 50.0%
!! GTAGGTTGGTGACTGGAGAT+GGG - contig580end:9703-9722 MsG0080048977.01.T01:intergenic 50.0%
!! GTGGCAAGAAGTGCTGTCTT+GGG + contig580end:10257-10276 MsG0080048977.01.T01:intron 50.0%
!! GTTGCTGCTGTTTCTTGTGG+GGG + contig580end:13884-13903 MsG0080048977.01.T01:CDS 50.0%
!! TAGGTTGGTAAAAGGGGCCT+GGG + contig580end:11825-11844 MsG0080048977.01.T01:CDS 50.0%
!! TCAAGGCTAGGTACTGGTCT+GGG - contig580end:14119-14138 MsG0080048977.01.T01:intergenic 50.0%
!! TGATGGTGGGCTTTGGGTTT+GGG + contig580end:9850-9869 MsG0080048977.01.T01:CDS 50.0%
!! TGGTGGGCTAAACTGCAACT+AGG + contig580end:13143-13162 MsG0080048977.01.T01:intron 50.0%
!! TGGTTGTTGATGGTGGGCTT+TGG + contig580end:9843-9862 MsG0080048977.01.T01:CDS 50.0%
!! TTGATGGTGGGCTTTGGGTT+TGG + contig580end:9849-9868 MsG0080048977.01.T01:CDS 50.0%
!!! TATGGTGGTTTTGGGGCACT+TGG + contig580end:11772-11791 MsG0080048977.01.T01:CDS 50.0%
ACAGGGCATGGTTGTATCGC+TGG - contig580end:15032-15051 MsG0080048977.01.T01:intergenic 55.0%
AGACAGCACTTCTTGCCACC+GGG - contig580end:10256-10275 MsG0080048977.01.T01:intergenic 55.0%
CAACTCCTCTCATGGGGCAA+AGG + contig580end:9632-9651 MsG0080048977.01.T01:CDS 55.0%
CATTCAGAAGCGGGGTGGAA+TGG - contig580end:9302-9321 MsG0080048977.01.T01:intergenic 55.0%
CCAACTGACCTTGTCCACCA+TGG - contig580end:14317-14336 MsG0080048977.01.T01:intergenic 55.0%
CTTTGCCCCATGAGAGGAGT+TGG - contig580end:9634-9653 MsG0080048977.01.T01:intergenic 55.0%
GATTCGCAGTTGGGAGTTCC+TGG + contig580end:15002-15021 MsG0080048977.01.T01:exon 55.0%
GCTCTCACATATGCAGGGTC+TGG - contig580end:12534-12553 MsG0080048977.01.T01:intergenic 55.0%
GCTTCATCTGCAGCTGTCAC+AGG + contig580end:14423-14442 MsG0080048977.01.T01:intron 55.0%
GGACAAGGTCAGTTGGGTCA+TGG + contig580end:14321-14340 MsG0080048977.01.T01:CDS 55.0%
GGCTAAAGTACAGTTGGGGC+TGG + contig580end:13123-13142 MsG0080048977.01.T01:intron 55.0%
GGGGAGCAACAATAAAGGGG+TGG + contig580end:9778-9797 MsG0080048977.01.T01:CDS 55.0%
GGTGGCCACTGCCCAATATA+TGG + contig580end:14682-14701 MsG0080048977.01.T01:intron 55.0%
GGTGTGTTAGCGTCGCTATG+CGG - contig580end:9535-9554 MsG0080048977.01.T01:intergenic 55.0%
GTGGAGGTTATTGGGGGAGA+GGG + contig580end:11459-11478 MsG0080048977.01.T01:intron 55.0%
GTGTATGCTTCAAGGAGCGG+TGG + contig580end:10730-10749 MsG0080048977.01.T01:intron 55.0%
TCTGTTGCGCTTACCTCTGC+TGG + contig580end:9983-10002 MsG0080048977.01.T01:CDS 55.0%
TGGGGTCGAGAAGAAGGAGA+AGG + contig580end:13776-13795 MsG0080048977.01.T01:CDS 55.0%
TGTGGAGGTTATTGGGGGAG+AGG + contig580end:11458-11477 MsG0080048977.01.T01:intron 55.0%
TTGGTAAAAGGGGCCTGGGA+GGG + contig580end:11829-11848 MsG0080048977.01.T01:CDS 55.0%
! CAGGCCCCTTTTACCAACCT+AGG - contig580end:11826-11845 MsG0080048977.01.T01:intergenic 55.0%
! GAGTGTGGAGGTTTTCGTGG+TGG - contig580end:9579-9598 MsG0080048977.01.T01:intergenic 55.0%
! GAGTTGGATTGTGGTGGGGT+TGG - contig580end:9618-9637 MsG0080048977.01.T01:intergenic 55.0%
! GGTGTCTGAGGTGTAGAGTG+TGG - contig580end:9594-9613 MsG0080048977.01.T01:intergenic 55.0%
! GTCTGAGGTGTAGAGTGTGG+AGG - contig580end:9591-9610 MsG0080048977.01.T01:intergenic 55.0%
! GTGTTTGATAGTCCCCTCCC+AGG - contig580end:11845-11864 MsG0080048977.01.T01:intergenic 55.0%
! GTTGGATTGTGGTGGGGTTG+GGG - contig580end:9616-9635 MsG0080048977.01.T01:intergenic 55.0%
! TGTGGAGGTTTTCGTGGTGG+TGG - contig580end:9576-9595 MsG0080048977.01.T01:intergenic 55.0%
! TTGGATTGTGGTGGGGTTGG+GGG - contig580end:9615-9634 MsG0080048977.01.T01:intergenic 55.0%
!! CCATGGTGGACAAGGTCAGT+TGG + contig580end:14314-14333 MsG0080048977.01.T01:CDS 55.0%
!! CTAGGTTGGTAAAAGGGGCC+TGG + contig580end:11824-11843 MsG0080048977.01.T01:CDS 55.0%
!! CTCAAGGCTAGGTACTGGTC+TGG - contig580end:14120-14139 MsG0080048977.01.T01:intergenic 55.0%
!! GATGGTGGGCTTTGGGTTTG+GGG + contig580end:9851-9870 MsG0080048977.01.T01:CDS 55.0%
!! GGGAGAAGTAGGTTGGTGAC+TGG - contig580end:9710-9729 MsG0080048977.01.T01:intergenic 55.0%
!! GGGCTTTGGGTTTGGGGTAA+AGG + contig580end:9857-9876 MsG0080048977.01.T01:CDS 55.0%
!! GGTGGCAAGAAGTGCTGTCT+TGG + contig580end:10256-10275 MsG0080048977.01.T01:intron 55.0%
!! TTTCGTGGTGGTGGAGAAGG+AGG - contig580end:9567-9586 MsG0080048977.01.T01:intergenic 55.0%
!!! GGTTTTCGTGGTGGTGGAGA+AGG - contig580end:9570-9589 MsG0080048977.01.T01:intergenic 55.0%
ATCCCACCGTCCACTAGCAG+AGG - contig580end:10320-10339 MsG0080048977.01.T01:intergenic 60.0%
ATTGGGCCTTGGTCCTGGTC+GGG + contig580end:13802-13821 MsG0080048977.01.T01:CDS 60.0%
CTCAGGCCCAGGTAAAAGCC+CGG - contig580end:9759-9778 MsG0080048977.01.T01:intergenic 60.0%
GATTGGGCCTTGGTCCTGGT+CGG + contig580end:13801-13820 MsG0080048977.01.T01:CDS 60.0%
GGACAACTGTGGAACTGGGG+AGG + contig580end:13935-13954 MsG0080048977.01.T01:CDS 60.0%
GGAGAAGGTCGATTGGGCCT+TGG + contig580end:13791-13810 MsG0080048977.01.T01:CDS 60.0%
GGTTGTATCGCTGGTAGCCC+AGG - contig580end:15023-15042 MsG0080048977.01.T01:intergenic 60.0%
GTGCTTTCATGGGGCCATGG+TGG + contig580end:14300-14319 MsG0080048977.01.T01:CDS 60.0%
GTGTTAGCGTCGCTATGCGG+CGG - contig580end:9532-9551 MsG0080048977.01.T01:intergenic 60.0%
TCAGGCCCAGGTAAAAGCCC+GGG - contig580end:9758-9777 MsG0080048977.01.T01:intergenic 60.0%
TGGTAAAAGGGGCCTGGGAG+GGG + contig580end:11830-11849 MsG0080048977.01.T01:CDS 60.0%
! AACACCCCCGGGCTTTTACC+TGG + contig580end:9749-9768 MsG0080048977.01.T01:CDS 60.0%
! ACACCCCCGGGCTTTTACCT+GGG + contig580end:9750-9769 MsG0080048977.01.T01:CDS 60.0%
! AGCCTCTGCTAGTGGACGGT+GGG + contig580end:10315-10334 MsG0080048977.01.T01:intron 60.0%
! CTGCTAGTGGACGGTGGGAT+TGG + contig580end:10320-10339 MsG0080048977.01.T01:intron 60.0%
! GGCTTTTACCTGGGCCTGAG+GGG + contig580end:9759-9778 MsG0080048977.01.T01:CDS 60.0%
! GGGAATGGGTCCCCCCATTT+TGG - contig580end:12513-12532 MsG0080048977.01.T01:intergenic 60.0%
! GGGCTTTTACCTGGGCCTGA+GGG + contig580end:9758-9777 MsG0080048977.01.T01:CDS 60.0%
! GTCTCTGGTTCGAATCCCGG+TGG + contig580end:10238-10257 MsG0080048977.01.T01:intron 60.0%
! GTTGGTAAAAGGGGCCTGGG+AGG + contig580end:11828-11847 MsG0080048977.01.T01:CDS 60.0%
!! TCATGGGGCCATGGTGGACA+AGG + contig580end:14306-14325 MsG0080048977.01.T01:CDS 60.0%
AGGCCCAGGTAAAAGCCCGG+GGG - contig580end:9756-9775 MsG0080048977.01.T01:intergenic 65.0%
AGGCGCCTTTGCCCCATGAG+AGG - contig580end:9640-9659 MsG0080048977.01.T01:intergenic 65.0%
CAGGCCCAGGTAAAAGCCCG+GGG - contig580end:9757-9776 MsG0080048977.01.T01:intergenic 65.0%
GGTCGATTGGGCCTTGGTCC+TGG + contig580end:13797-13816 MsG0080048977.01.T01:CDS 65.0%
TTAGCGTCGCTATGCGGCGG+CGG - contig580end:9529-9548 MsG0080048977.01.T01:intergenic 65.0%
TTGGGCCTTGGTCCTGGTCG+GGG + contig580end:13803-13822 MsG0080048977.01.T01:CDS 65.0%
TTGTTGCTCCCCTCAGGCCC+AGG - contig580end:9770-9789 MsG0080048977.01.T01:intergenic 65.0%
! CGGGCTTTTACCTGGGCCTG+AGG + contig580end:9757-9776 MsG0080048977.01.T01:CDS 65.0%
! GAGCCTCTGCTAGTGGACGG+TGG + contig580end:10314-10333 MsG0080048977.01.T01:intron 65.0%
!! AAAGGCGCCTCCGGCCAACT+CGG + contig580end:9650-9669 MsG0080048977.01.T01:CDS 65.0%
!! TCATGGGGCAAAGGCGCCTC+CGG + contig580end:9641-9660 MsG0080048977.01.T01:CDS 65.0%
CGGGGCCCAGATCATGCAGG+TGG + contig580end:13821-13840 MsG0080048977.01.T01:CDS 70.0%
GCATGATCTGGGCCCCGACC+AGG - contig580end:13818-13837 MsG0080048977.01.T01:intergenic 70.0%
GGTCGGGGCCCAGATCATGC+AGG + contig580end:13818-13837 MsG0080048977.01.T01:CDS 70.0%
TCGCTATGCGGCGGCGGTGA+CGG - contig580end:9523-9542 MsG0080048977.01.T01:intergenic 70.0%
TGCAGGCGGTTGCCCCCACA+GGG + contig580end:12667-12686 MsG0080048977.01.T01:intron 70.0%
!! GGTGGGGTTGGGGGTGTCTG+AGG - contig580end:9606-9625 MsG0080048977.01.T01:intergenic 70.0%
CTGGGCCCCGACCAGGACCA+AGG - contig580end:13811-13830 MsG0080048977.01.T01:intergenic 75.0%
CTTCGACGCCGCCGCCGAGT+TGG - contig580end:9667-9686 MsG0080048977.01.T01:intergenic 75.0%
GCAGGCGGTTGCCCCCACAG+GGG + contig580end:12668-12687 MsG0080048977.01.T01:intron 75.0%
GTGCAGGCGGTTGCCCCCAC+AGG + contig580end:12666-12685 MsG0080048977.01.T01:intron 75.0%
! CTATGCGGCGGCGGTGACGG+TGG - contig580end:9520-9539 MsG0080048977.01.T01:intergenic 75.0%
! GCCTCCGGCCAACTCGGCGG+CGG + contig580end:9656-9675 MsG0080048977.01.T01:CDS 80.0%
! GGCGCCTCCGGCCAACTCGG+CGG + contig580end:9653-9672 MsG0080048977.01.T01:CDS 80.0%
!! GACGCCGCCGCCGAGTTGGC+CGG - contig580end:9663-9682 MsG0080048977.01.T01:intergenic 80.0%
!! GCCGCCGCCGAGTTGGCCGG+AGG - contig580end:9660-9679 MsG0080048977.01.T01:intergenic 85.0%
Chromosome Type Strat End Strand Name
contig580end gene 8916 15318 8916 ID=MsG0080048977.01;
contig580end mRNA 8916 15318 8916 ID=MsG0080048977.01.T01;Parent=MsG0080048977.01
contig580end exon 8916 9003 8916 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end exon 9500 10020 9500 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end CDS 9500 10020 9500 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end CDS 11768 11907 11768 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end exon 11768 11907 11768 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end CDS 13762 13956 13762 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end exon 13762 13956 13762 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end CDS 14066 14194 14066 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end exon 14066 14194 14066 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end CDS 14289 14437 14289 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end exon 14289 14437 14289 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end CDS 14803 14825 14803 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end exon 14803 14825 14803 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
contig580end CDS 14974 15160 14974 ID=MsG0080048977.01.T01.cds;Parent=MsG0080048977.01.T01
contig580end exon 14974 15318 14974 ID=MsG0080048977.01.T01.exon;Parent=MsG0080048977.01.T01
Gene Sequence

>MsG0080048977.01.T01

ATGATGGCGACGAATCTCCACCGTCACCGCCGCCGCATAGCGACGCTAACACACCGCTTATATTCCTCCTTCTCCACCACCACGAAAACCTCCACACTCTACACCTCAGACACCCCCAACCCCACCACAATCCAACTCCTCTCATGGGGCAAAGGCGCCTCCGGCCAACTCGGCGGCGGCGTCGAAGAAACTCGTCTCTACCCATCTCCAGTCACCAACCTACTTCTCCCTCCAAAATTCAATCTTTTCAACACCCCCGGGCTTTTACCTGGGCCTGAGGGGAGCAACAATAAAGGGGTGGAAGTGGAAGTGGGTATTTCGTGTGGGCTTTTTCATTCTTGTTTGGTTGTTGATGGTGGGCTTTGGGTTTGGGGTAAAGGTGATGGTGGGAGATTAGGCTTAGGTCATGAGAATTCGATGTTTGTTCCTACTTTGAATCCTCATCTTGATAATGTGAAGTCTGTTGCTCTTGGTGGGTTGCATTCTGTTGCGCTTACCTCTGCTGGTGAAGTTTTTACATGGGGTTATGGTGGTTTTGGGGCACTTGGACACTCAGTATACACAAGGGAGCTATTCCCTAGGTTGGTAAAAGGGGCCTGGGAGGGGACTATCAAACACATTGCTACTAGTGGAGCGCATACTGCGGCAGTAACTGAATCAGGGGAGCTTTATATATGGGGTCGAGAAGAAGGAGAAGGTCGATTGGGCCTTGGTCCTGGTCGGGGCCCAGATCATGCAGGTGGACTTAGTATCCCTTGCAAAGTAAAAGAATTACCTTTCTCTGTTGCTGCTGTTTCTTGTGGGGGATTTTTCACACTGGCATTGACAGAGGAAGGACAACTGTGGAACTGGGGAGCAAATTCTAACTATGAACTTGGGAGAGGTGATAGAATTGGTGGTTGGAGACCCAGACCAGTACCTAGCCTTGAGAAGGTTCGAGTAATTCAAATAGCAAGCGGAGGATATCACTCCCTTGCATTAACAGATGACGGCAAAGTGCTTTCATGGGGCCATGGTGGACAAGGTCAGTTGGGTCATGGATCTGTCGAGAACCAGAAGATACCAACATTAGTCGAGGCTATAGCTCATGAGCATATTATATATATTTCTTGTGGGGGTGCTTCATCTGCAGCTACTGGTTTTGACTCAGATAAAATGAAAATTATACATGTGGGAAATGCCAGTGATTCGCAGTTGGGAGTTCCTGGGCTACCAGCGATACAACCATGCCCTGTTGAAGTCAATTTTTTAATGGAAGATGATGGATTAGGATCACACAAGGTTTTATCAATTGCAAATGGCGCATCACATGCCATGTGTTTAGCTTTGAGGGAAAGTTGTTGA
Protein sequence

>MsG0080048977.01.T01

MMATNLHRHRRRIATLTHRLYSSFSTTTKTSTLYTSDTPNPTTIQLLSWGKGASGQLGGGVEETRLYPSPVTNLLLPPKFNLFNTPGLLPGPEGSNNKGVEVEVGISCGLFHSCLVVDGGLWVWGKGDGGRLGLGHENSMFVPTLNPHLDNVKSVALGGLHSVALTSAGEVFTWGYGGFGALGHSVYTRELFPRLVKGAWEGTIKHIATSGAHTAAVTESGELYIWGREEGEGRLGLGPGRGPDHAGGLSIPCKVKELPFSVAAVSCGGFFTLALTEEGQLWNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQIASGGYHSLALTDDGKVLSWGHGGQGQLGHGSVENQKIPTLVEAIAHEHIIYISCGGASSAATGFDSDKMKIIHVGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGSHKVLSIANGASHAMCLALRESC*