AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045643.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045643.01.T01 MTR_8g075830 96.986 365 11 0 1 365 1 365 0.0 737
MsG0880045643.01.T01 MTR_8g075890 90.137 365 36 0 1 365 1 365 0.0 699
MsG0880045643.01.T01 MTR_3g058610 80.508 354 69 0 1 354 1 354 0.0 619
MsG0880045643.01.T01 MTR_5g022020 80.422 332 65 0 1 332 1 332 0.0 577
MsG0880045643.01.T01 MTR_3g092890 38.509 322 185 8 16 333 15 327 1.30e-66 214
MsG0880045643.01.T01 MTR_8g024120 38.006 321 189 8 16 332 18 332 5.51e-66 213
MsG0880045643.01.T01 MTR_4g015790 36.232 345 195 9 3 325 10 351 9.84e-65 210
MsG0880045643.01.T01 MTR_7g062600 37.069 348 202 9 3 338 12 354 3.14e-63 206
MsG0880045643.01.T01 MTR_7g062550 35.028 354 220 7 3 351 21 369 1.04e-62 205
MsG0880045643.01.T01 MTR_7g068650 35.135 333 198 8 3 323 11 337 1.06e-62 204
MsG0880045643.01.T01 MTR_7g062570 36.503 326 199 6 20 342 35 355 3.16e-62 203
MsG0880045643.01.T01 MTR_7g062580 34.203 345 217 7 3 342 16 355 6.91e-61 200
MsG0880045643.01.T01 MTR_5g082750 36.593 317 192 7 15 325 24 337 1.38e-60 199
MsG0880045643.01.T01 MTR_3g070860 35.736 333 199 10 3 325 11 338 1.97e-60 199
MsG0880045643.01.T01 MTR_3g063180 35.507 276 165 5 39 305 42 313 3.54e-59 195
MsG0880045643.01.T01 MTR_5g032870 36.735 294 180 4 15 304 14 305 6.35e-56 186
MsG0880045643.01.T01 MTR_5g032880 37.966 295 175 6 15 304 352 643 6.68e-55 191
MsG0880045643.01.T01 MTR_5g032880 37.288 295 171 5 15 305 14 298 2.36e-52 184
MsG0880045643.01.T01 MTR_7g063730 33.939 330 209 8 20 346 44 367 1.35e-53 181
MsG0880045643.01.T01 MTR_1g062110 37.226 274 158 6 38 303 65 332 2.41e-53 181
MsG0880045643.01.T01 MTR_7g081710 32.317 328 213 7 14 337 23 345 3.86e-53 179
MsG0880045643.01.T01 MTR_2g437380 32.344 337 217 6 14 344 26 357 2.18e-52 178
MsG0880045643.01.T01 MTR_5g059140 34.084 311 183 8 4 303 6 305 3.82e-52 176
MsG0880045643.01.T01 MTR_4g087090 34.000 300 183 6 18 305 10 306 4.45e-51 174
MsG0880045643.01.T01 MTR_8g064200 31.746 315 204 7 24 333 36 344 7.91e-51 174
MsG0880045643.01.T01 MTR_8g064200 31.746 315 204 7 24 333 41 349 8.85e-51 174
MsG0880045643.01.T01 MTR_3g026150 34.421 337 198 10 11 333 24 351 8.98e-51 173
MsG0880045643.01.T01 MTR_5g059130 34.304 309 185 8 4 303 6 305 2.04e-50 172
MsG0880045643.01.T01 MTR_3g072810 34.627 335 202 7 4 330 3 328 6.03e-50 171
MsG0880045643.01.T01 MTR_7g102820 35.216 301 165 9 25 303 47 339 6.40e-50 172
MsG0880045643.01.T01 MTR_3g091350 34.432 273 161 7 39 303 59 321 6.73e-50 171
MsG0880045643.01.T01 MTR_4g117880 36.201 279 164 8 19 292 41 310 1.38e-49 171
MsG0880045643.01.T01 MTR_5g011250 33.841 328 197 8 19 328 17 342 4.03e-49 169
MsG0880045643.01.T01 MTR_5g085330 35.688 269 158 7 39 303 5 262 5.74e-49 167
MsG0880045643.01.T01 MTR_7g016090 31.269 323 207 8 13 330 13 325 6.17e-49 168
MsG0880045643.01.T01 MTR_7g016090 31.269 323 207 8 13 330 15 327 7.60e-49 168
MsG0880045643.01.T01 MTR_5g055900 30.032 313 212 4 38 348 46 353 1.20e-48 167
MsG0880045643.01.T01 MTR_7g045650 37.643 263 157 5 18 278 38 295 1.54e-48 166
MsG0880045643.01.T01 MTR_6g015950 32.424 330 205 8 15 337 15 333 3.36e-48 166
MsG0880045643.01.T01 MTR_1g070135 32.886 298 184 6 14 305 13 300 3.62e-48 166
MsG0880045643.01.T01 MTR_5g048470 31.333 300 196 6 38 333 52 345 7.55e-48 166
MsG0880045643.01.T01 MTR_1g034140 30.816 331 208 4 16 332 4 327 8.58e-48 165
MsG0880045643.01.T01 MTR_1g070080 35.662 272 163 6 36 303 35 298 1.06e-47 165
MsG0880045643.01.T01 MTR_4g087120 28.955 335 217 9 16 332 4 335 7.77e-47 163
MsG0880045643.01.T01 MTR_8g008930 33.106 293 183 7 19 305 41 326 8.83e-47 163
MsG0880045643.01.T01 MTR_1g033810 32.288 319 202 9 20 331 27 338 9.17e-47 163
MsG0880045643.01.T01 MTR_3g072820 33.115 305 191 6 4 303 7 303 9.72e-47 162
MsG0880045643.01.T01 MTR_1g070120 30.721 319 204 8 19 330 18 326 9.76e-47 162
MsG0880045643.01.T01 MTR_8g009080 36.131 274 159 6 39 305 94 358 1.56e-46 163
MsG0880045643.01.T01 MTR_0328s0030 31.429 315 207 6 38 349 44 352 2.94e-46 161
MsG0880045643.01.T01 MTR_3g117420 31.724 290 191 6 39 324 52 338 3.28e-46 161
MsG0880045643.01.T01 MTR_3g083370 34.317 271 163 7 37 303 2 261 6.84e-46 159
MsG0880045643.01.T01 MTR_5g055680 27.811 338 227 7 4 333 10 338 9.70e-46 160
MsG0880045643.01.T01 MTR_8g074050 31.081 296 193 6 39 326 52 344 1.22e-45 160
MsG0880045643.01.T01 MTR_0009s0050 30.915 317 201 8 25 333 32 338 1.37e-45 160
MsG0880045643.01.T01 MTR_0009s0050 30.915 317 201 8 25 333 32 338 1.42e-45 160
MsG0880045643.01.T01 MTR_6g464620 35.314 303 184 6 9 303 36 334 1.83e-45 160
MsG0880045643.01.T01 MTR_5g048570 28.274 336 226 6 4 333 10 336 1.87e-45 159
MsG0880045643.01.T01 MTR_5g065010 33.553 304 173 11 8 303 19 301 2.12e-45 159
MsG0880045643.01.T01 MTR_3g091360 33.700 273 163 7 39 303 52 314 2.15e-45 159
MsG0880045643.01.T01 MTR_0009s0480 33.209 268 171 5 38 303 45 306 2.27e-45 159
MsG0880045643.01.T01 MTR_1g102070 34.768 302 185 6 10 303 32 329 2.68e-45 159
MsG0880045643.01.T01 MTR_1g034120 29.712 313 190 6 16 305 4 309 3.04e-45 159
MsG0880045643.01.T01 MTR_5g055690 30.351 313 210 5 38 347 46 353 4.10e-45 158
MsG0880045643.01.T01 MTR_5g048550 29.042 334 228 5 4 333 10 338 6.49e-45 158
MsG0880045643.01.T01 MTR_2g072890 33.457 269 175 3 38 305 51 316 7.21e-45 158
MsG0880045643.01.T01 MTR_2g072910 31.475 305 203 4 4 305 14 315 7.43e-45 158
MsG0880045643.01.T01 MTR_1g070085 30.678 339 226 6 14 349 12 344 7.93e-45 157
MsG0880045643.01.T01 MTR_1g070085 30.678 339 226 6 14 349 12 344 7.93e-45 157
MsG0880045643.01.T01 MTR_5g048850 32.963 270 167 4 38 298 46 310 9.10e-45 157
MsG0880045643.01.T01 MTR_1g034060 29.393 313 191 6 16 305 4 309 1.97e-44 157
MsG0880045643.01.T01 MTR_1g093140 32.308 260 168 4 39 296 73 326 2.15e-44 157
MsG0880045643.01.T01 MTR_1g070185 32.234 273 168 5 38 305 68 328 2.80e-44 157
MsG0880045643.01.T01 MTR_8g009090 33.574 277 173 6 19 292 41 309 3.40e-44 156
MsG0880045643.01.T01 MTR_5g055820 30.100 299 201 5 38 333 46 339 3.46e-44 156
MsG0880045643.01.T01 MTR_2g069010 34.630 257 157 4 39 292 69 317 3.64e-44 157
MsG0880045643.01.T01 MTR_4g087140 30.519 308 193 8 16 305 4 308 1.02e-43 155
MsG0880045643.01.T01 MTR_2g069060 34.182 275 161 5 39 305 49 311 1.44e-43 154
MsG0880045643.01.T01 MTR_1g062110 37.339 233 132 6 38 262 65 291 2.22e-43 153
MsG0880045643.01.T01 MTR_1g048940 30.769 286 190 6 11 292 16 297 5.57e-43 153
MsG0880045643.01.T01 MTR_8g009110 33.955 268 158 9 33 292 54 310 8.20e-43 152
MsG0880045643.01.T01 MTR_4g087110 27.066 351 219 7 16 340 4 343 8.58e-43 152
MsG0880045643.01.T01 MTR_3g088565 32.234 273 164 7 39 303 3 262 1.46e-42 150
MsG0880045643.01.T01 MTR_4g024660 30.921 304 194 6 39 333 67 363 1.70e-42 152
MsG0880045643.01.T01 MTR_2g025120 33.086 269 165 7 39 303 4 261 2.32e-42 150
MsG0880045643.01.T01 MTR_4g093840 34.909 275 157 8 39 303 62 324 2.33e-42 151
MsG0880045643.01.T01 MTR_4g087100 30.392 306 193 7 16 304 4 306 5.71e-42 150
MsG0880045643.01.T01 MTR_8g062600 32.117 274 173 5 39 305 67 334 5.75e-42 150
MsG0880045643.01.T01 MTR_7g029655 34.630 257 155 6 39 292 67 313 7.15e-42 150
MsG0880045643.01.T01 MTR_5g048740 33.588 262 165 6 36 294 42 297 1.35e-41 149
MsG0880045643.01.T01 MTR_2g068950 32.692 260 158 5 39 292 63 311 1.63e-41 149
MsG0880045643.01.T01 MTR_3g045230 31.879 298 185 7 39 330 56 341 3.60e-41 148
MsG0880045643.01.T01 MTR_1g093120 32.422 256 164 4 39 292 67 315 3.95e-41 148
MsG0880045643.01.T01 MTR_2g068840 33.577 274 169 6 38 304 54 321 4.07e-41 148
MsG0880045643.01.T01 MTR_8g028435 31.541 279 176 8 19 292 41 309 4.37e-41 148
MsG0880045643.01.T01 MTR_7g016080 30.100 299 185 9 13 305 13 293 4.56e-41 147
MsG0880045643.01.T01 MTR_2g068960 32.308 260 159 5 39 292 63 311 8.44e-41 147
MsG0880045643.01.T01 MTR_8g009160 31.365 271 176 5 33 300 54 317 1.08e-40 147
MsG0880045643.01.T01 MTR_8g074070 31.227 269 180 4 38 304 51 316 1.78e-40 146
MsG0880045643.01.T01 MTR_2g069020 33.977 259 156 5 39 292 67 315 2.22e-40 146
MsG0880045643.01.T01 MTR_5g055800 30.576 278 176 6 20 295 37 299 2.95e-40 145
MsG0880045643.01.T01 MTR_8g009170 31.900 279 176 8 19 292 41 310 4.32e-40 145
MsG0880045643.01.T01 MTR_2g069020 33.977 259 156 5 39 292 67 315 4.92e-40 146
MsG0880045643.01.T01 MTR_0032s0040 33.846 260 155 6 39 292 70 318 5.26e-40 145
MsG0880045643.01.T01 MTR_8g063070 31.559 263 169 4 33 292 61 315 6.89e-40 145
MsG0880045643.01.T01 MTR_2g069090 33.852 257 160 6 39 292 68 317 7.57e-40 145
MsG0880045643.01.T01 MTR_1g093110 31.765 255 167 3 39 292 70 318 1.00e-39 145
MsG0880045643.01.T01 MTR_2g069060 36.522 230 127 4 39 261 27 244 2.02e-39 140
MsG0880045643.01.T01 MTR_2g069210 33.460 263 166 5 39 299 64 319 2.78e-39 143
MsG0880045643.01.T01 MTR_8g033380 32.781 302 192 5 11 305 28 325 3.37e-39 143
MsG0880045643.01.T01 MTR_3g026150 34.661 251 158 5 86 333 1 248 4.14e-39 140
MsG0880045643.01.T01 MTR_3g043900 31.650 297 186 6 39 330 56 340 4.67e-39 142
MsG0880045643.01.T01 MTR_4g116010 32.727 275 164 5 39 305 50 311 5.23e-39 142
MsG0880045643.01.T01 MTR_8g009080 37.445 227 129 4 39 261 94 311 9.41e-39 141
MsG0880045643.01.T01 MTR_8g009080 37.445 227 129 4 39 261 94 311 1.31e-38 141
MsG0880045643.01.T01 MTR_2g069190 34.241 257 158 5 39 292 68 316 1.70e-38 141
MsG0880045643.01.T01 MTR_2g102570 30.216 278 170 6 36 303 49 312 1.89e-38 141
MsG0880045643.01.T01 MTR_7g056347 32.296 257 163 4 39 292 67 315 2.00e-38 141
MsG0880045643.01.T01 MTR_3g117485 32.129 249 162 5 60 304 71 316 4.78e-38 140
MsG0880045643.01.T01 MTR_3g117485 32.231 242 157 5 67 304 6 244 5.39e-38 137
MsG0880045643.01.T01 MTR_2g437380 32.819 259 169 3 89 344 7 263 1.02e-37 137
MsG0880045643.01.T01 MTR_7g102720 29.831 295 195 6 39 330 37 322 1.71e-37 138
MsG0880045643.01.T01 MTR_3g026150 34.733 262 151 8 11 260 24 277 2.47e-37 136
MsG0880045643.01.T01 MTR_7g451860 30.693 303 186 8 38 333 40 325 3.54e-37 137
MsG0880045643.01.T01 MTR_7g047670 30.693 303 186 8 38 333 40 325 3.54e-37 137
MsG0880045643.01.T01 MTR_8g041620 33.209 268 166 8 39 300 68 328 4.04e-37 138
MsG0880045643.01.T01 MTR_7g062560 29.560 318 206 8 19 333 41 343 6.29e-37 137
MsG0880045643.01.T01 MTR_1g032250 32.333 300 190 7 38 333 72 362 6.59e-37 137
MsG0880045643.01.T01 MTR_1g070135 32.016 253 156 6 14 260 13 255 6.85e-37 135
MsG0880045643.01.T01 MTR_3g096500 32.727 275 169 5 40 303 67 336 8.01e-37 137
MsG0880045643.01.T01 MTR_1g032140 33.000 300 188 7 38 333 65 355 9.95e-37 136
MsG0880045643.01.T01 MTR_0009s0480 33.628 226 142 5 38 261 45 264 1.45e-36 134
MsG0880045643.01.T01 MTR_3g088745 32.797 311 178 9 38 326 35 336 2.35e-36 135
MsG0880045643.01.T01 MTR_8g041600 31.801 261 161 6 39 292 68 318 3.70e-36 135
MsG0880045643.01.T01 MTR_1g081840 33.447 293 166 8 38 311 52 334 4.63e-36 135
MsG0880045643.01.T01 MTR_1g043760 33.721 258 157 3 39 292 54 301 8.08e-36 134
MsG0880045643.01.T01 MTR_1g032220 32.000 300 191 7 38 333 72 362 1.38e-35 134
MsG0880045643.01.T01 MTR_2g069300 31.852 270 164 5 33 294 48 305 1.45e-35 133
MsG0880045643.01.T01 MTR_5g048850 32.444 225 146 3 38 261 46 265 3.72e-35 130
MsG0880045643.01.T01 MTR_7g105070 31.034 261 171 5 36 294 56 309 6.13e-35 132
MsG0880045643.01.T01 MTR_6g092620 32.509 283 150 10 39 303 3 262 2.14e-34 129
MsG0880045643.01.T01 MTR_0009s0050 32.432 222 142 4 114 333 25 240 2.45e-34 127
MsG0880045643.01.T01 MTR_0009s0050 32.432 222 142 4 114 333 25 240 2.57e-34 127
MsG0880045643.01.T01 MTR_1g070085 32.946 258 158 6 95 349 21 266 3.84e-34 127
MsG0880045643.01.T01 MTR_2g072910 30.651 261 175 4 4 261 14 271 6.08e-34 127
MsG0880045643.01.T01 MTR_8g074070 29.740 269 165 5 38 304 51 297 6.24e-34 128
MsG0880045643.01.T01 MTR_4g074130 28.947 304 189 8 38 333 39 323 6.25e-34 128
MsG0880045643.01.T01 MTR_8g009170 32.258 248 154 8 19 261 41 279 8.41e-34 127
MsG0880045643.01.T01 MTR_1g070100 32.946 258 158 6 95 349 17 262 9.59e-34 126
MsG0880045643.01.T01 MTR_5g005570 30.164 305 182 9 38 333 36 318 1.42e-33 127
MsG0880045643.01.T01 MTR_8g469400 29.373 303 187 8 39 333 67 350 2.02e-33 127
MsG0880045643.01.T01 MTR_2g019370 30.037 273 175 6 44 304 25 293 3.04e-33 126
MsG0880045643.01.T01 MTR_1g043810 33.083 266 155 6 36 292 51 302 3.61e-33 127
MsG0880045643.01.T01 MTR_1g043770 32.482 274 168 5 39 305 53 316 3.63e-33 127
MsG0880045643.01.T01 MTR_2g033270 29.180 305 185 8 49 337 23 312 9.04e-33 125
MsG0880045643.01.T01 MTR_5g055690 32.000 225 146 4 39 261 47 266 2.32e-32 122
MsG0880045643.01.T01 MTR_2g083000 29.630 297 194 6 38 333 32 314 2.34e-32 124
MsG0880045643.01.T01 MTR_8g041600 33.043 230 137 6 39 261 68 287 5.96e-32 122
MsG0880045643.01.T01 MTR_2g070870 27.397 292 186 10 35 316 24 299 8.98e-32 122
MsG0880045643.01.T01 MTR_1g043775 32.463 268 154 7 36 292 51 302 1.79e-31 122
MsG0880045643.01.T01 MTR_0056s0160 31.461 178 119 2 127 303 17 192 1.98e-31 119
MsG0880045643.01.T01 MTR_2g083030 29.866 298 193 6 9 301 7 293 2.70e-31 121
MsG0880045643.01.T01 MTR_3g083370 33.624 229 137 7 37 261 2 219 3.78e-31 118
MsG0880045643.01.T01 MTR_1g011580 32.584 267 167 6 39 303 63 318 3.96e-31 121
MsG0880045643.01.T01 MTR_8g461330 26.398 322 201 10 35 337 23 327 1.19e-30 119
MsG0880045643.01.T01 MTR_3g040410 28.713 303 200 6 39 339 6 294 1.35e-30 119
MsG0880045643.01.T01 MTR_2g068800 30.769 247 143 6 38 279 54 277 1.89e-30 117
MsG0880045643.01.T01 MTR_4g119410 30.712 267 166 5 39 298 67 321 5.09e-30 118
MsG0880045643.01.T01 MTR_8g009120 31.086 267 155 8 33 292 54 298 7.45e-30 117
MsG0880045643.01.T01 MTR_2g025120 32.895 228 138 7 39 262 4 220 1.30e-29 114
MsG0880045643.01.T01 MTR_8g093930 30.325 277 169 7 39 301 47 313 1.31e-29 117
MsG0880045643.01.T01 MTR_4g087130 29.085 306 198 8 16 305 4 306 2.03e-29 116
MsG0880045643.01.T01 MTR_8g006930 32.685 257 162 6 39 292 67 315 3.09e-29 116
MsG0880045643.01.T01 MTR_8g009150 29.057 265 155 7 33 292 54 290 3.09e-29 115
MsG0880045643.01.T01 MTR_7g056393 33.077 260 157 7 39 292 67 315 5.49e-29 115
MsG0880045643.01.T01 MTR_8g093980 29.710 276 177 7 38 303 58 326 6.19e-29 115
MsG0880045643.01.T01 MTR_8g030880 31.203 266 167 7 36 292 2 260 6.77e-29 114
MsG0880045643.01.T01 MTR_1g086550 26.814 317 209 7 49 346 24 336 8.34e-29 114
MsG0880045643.01.T01 MTR_1g070110 32.889 225 112 6 83 303 4 193 1.44e-28 111
MsG0880045643.01.T01 MTR_0009s0050 36.875 160 97 3 176 333 1 158 2.27e-28 109
MsG0880045643.01.T01 MTR_4g123020 27.541 305 204 7 44 338 19 316 3.35e-28 112
MsG0880045643.01.T01 MTR_5g025090 25.753 299 202 7 39 333 5 287 6.24e-28 111
MsG0880045643.01.T01 MTR_7g078010 31.783 258 163 6 39 292 67 315 6.51e-27 110
MsG0880045643.01.T01 MTR_4g115990 30.769 273 155 8 39 305 46 290 6.74e-27 109
MsG0880045643.01.T01 MTR_5g025050 28.136 295 192 9 39 329 5 283 1.38e-26 107
MsG0880045643.01.T01 MTR_1g043770 32.599 227 139 3 39 261 53 269 1.68e-26 107
MsG0880045643.01.T01 MTR_7g077670 30.000 260 168 6 38 292 10 260 1.87e-26 107
MsG0880045643.01.T01 MTR_7g056353 29.218 243 164 3 58 300 63 297 2.57e-25 107
MsG0880045643.01.T01 MTR_1g043810 32.340 235 136 6 36 261 51 271 2.71e-25 104
MsG0880045643.01.T01 MTR_4g132770 44.762 105 55 2 200 303 29 131 4.70e-25 100
MsG0880045643.01.T01 MTR_4g100600 28.467 274 179 7 39 301 9 276 6.09e-24 100
MsG0880045643.01.T01 MTR_1g043775 31.646 237 135 7 36 261 51 271 1.38e-23 99.8
MsG0880045643.01.T01 MTR_5g027230 27.241 290 188 9 58 340 20 293 1.93e-23 99.4
MsG0880045643.01.T01 MTR_4g096840 25.632 277 190 7 46 311 28 299 2.75e-23 99.4
MsG0880045643.01.T01 MTR_6g088665 29.371 286 171 12 42 301 18 298 4.20e-23 99.0
MsG0880045643.01.T01 MTR_6g088665 28.521 284 175 10 42 301 18 297 1.27e-22 97.4
MsG0880045643.01.T01 MTR_5g025060 28.276 290 164 12 39 325 6 254 2.68e-22 95.5
MsG0880045643.01.T01 MTR_7g078010 32.599 227 140 6 39 261 67 284 2.73e-22 95.9
MsG0880045643.01.T01 MTR_1g032240 44.144 111 50 3 187 296 48 147 3.36e-22 92.8
MsG0880045643.01.T01 MTR_8g009180 37.500 128 78 1 165 292 114 239 4.95e-22 95.1
MsG0880045643.01.T01 MTR_8g102600 27.875 287 174 8 63 326 31 307 5.91e-22 95.5
MsG0880045643.01.T01 MTR_4g100590 26.935 323 202 11 39 348 9 310 6.97e-22 95.1
MsG0880045643.01.T01 MTR_0009s0400 43.299 97 52 2 200 295 1 95 2.15e-21 89.7
MsG0880045643.01.T01 MTR_4g011720 27.338 278 189 6 59 331 31 300 2.40e-21 93.6
MsG0880045643.01.T01 MTR_1g027290 27.119 295 185 11 26 303 16 297 1.97e-20 91.3
MsG0880045643.01.T01 MTR_5g024940 26.259 278 171 7 58 331 20 267 2.25e-20 90.5
MsG0880045643.01.T01 MTR_3g464530 24.415 299 192 10 47 333 34 310 2.50e-20 90.9
MsG0880045643.01.T01 MTR_1g043840 37.594 133 81 1 160 292 54 184 5.36e-20 90.1
MsG0880045643.01.T01 MTR_4g011690 26.103 272 189 7 59 325 31 295 3.39e-17 81.6
MsG0880045643.01.T01 MTR_1g027310 25.000 300 161 14 20 303 24 275 2.55e-16 79.3
MsG0880045643.01.T01 MTR_8g102600 27.925 265 158 8 85 326 3 257 1.82e-15 76.3
MsG0880045643.01.T01 MTR_4g100600 27.434 226 148 6 39 253 9 229 3.56e-15 74.3
MsG0880045643.01.T01 MTR_3g108520 25.460 326 205 12 38 341 6 315 3.83e-15 75.9
MsG0880045643.01.T01 MTR_4g021360 24.823 282 197 9 38 310 6 281 4.98e-14 72.4
MsG0880045643.01.T01 MTR_7g056370 28.289 152 94 4 39 184 46 188 4.48e-13 68.2
MsG0880045643.01.T01 MTR_4g021380 25.342 292 192 9 37 307 5 291 8.94e-13 68.9
MsG0880045643.01.T01 MTR_3g040440 44.286 70 37 1 213 282 15 82 1.25e-11 64.7
MsG0880045643.01.T01 MTR_4g100590 28.774 212 130 8 145 348 65 263 2.91e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045643.01.T01 AT3G51240 77.260 365 76 2 1 365 1 358 0.0 608
MsG0880045643.01.T01 AT3G51240 78.929 280 53 1 86 365 1 274 1.34e-173 484
MsG0880045643.01.T01 AT5G24530 35.671 328 197 6 12 333 11 330 2.59e-65 211
MsG0880045643.01.T01 AT4G10490 37.658 316 183 10 18 326 20 328 1.27e-62 204
MsG0880045643.01.T01 AT2G38240 36.145 332 196 9 3 325 8 332 1.83e-60 199
MsG0880045643.01.T01 AT4G10500 33.434 332 208 8 10 335 14 338 1.73e-59 196
MsG0880045643.01.T01 AT3G11180 34.431 334 202 8 3 325 52 379 1.51e-58 195
MsG0880045643.01.T01 AT3G11180 34.431 334 202 8 3 325 52 379 1.73e-58 195
MsG0880045643.01.T01 AT4G16330 36.149 296 175 7 17 305 41 329 1.85e-58 194
MsG0880045643.01.T01 AT5G05600 35.045 331 204 8 3 325 23 350 9.54e-58 192
MsG0880045643.01.T01 AT3G19010 34.416 308 175 5 11 305 11 304 1.13e-54 183
MsG0880045643.01.T01 AT3G19010 34.416 308 175 5 11 305 11 304 1.13e-54 183
MsG0880045643.01.T01 AT3G19000 33.117 308 186 4 16 305 4 309 4.71e-53 179
MsG0880045643.01.T01 AT3G55970 33.333 315 196 7 3 305 10 322 7.92e-53 179
MsG0880045643.01.T01 AT3G21420 34.471 293 181 5 20 304 32 321 3.66e-52 177
MsG0880045643.01.T01 AT1G78550 31.629 313 208 6 15 324 28 337 6.10e-52 176
MsG0880045643.01.T01 AT5G08640 34.385 317 195 7 20 330 23 332 6.66e-52 176
MsG0880045643.01.T01 AT5G08640 34.385 317 195 7 20 330 23 332 6.66e-52 176
MsG0880045643.01.T01 AT4G16330 39.381 226 128 5 86 305 1 223 6.00e-49 166
MsG0880045643.01.T01 AT4G22880 33.445 299 189 7 38 328 46 342 1.99e-48 167
MsG0880045643.01.T01 AT4G22880 33.445 299 189 7 38 328 46 342 1.99e-48 167
MsG0880045643.01.T01 AT4G22880 33.445 299 189 7 38 328 46 342 1.99e-48 167
MsG0880045643.01.T01 AT3G19000 33.333 264 156 4 16 261 4 265 2.58e-48 165
MsG0880045643.01.T01 AT1G55290 32.867 286 172 8 39 316 62 335 7.02e-48 166
MsG0880045643.01.T01 AT1G03400 36.992 246 147 4 47 290 56 295 8.95e-47 163
MsG0880045643.01.T01 AT1G17020 33.227 313 191 9 4 305 14 319 1.59e-46 162
MsG0880045643.01.T01 AT2G36690 34.601 263 157 8 38 294 60 313 2.00e-46 162
MsG0880045643.01.T01 AT2G36690 34.601 263 157 8 38 294 60 313 2.00e-46 162
MsG0880045643.01.T01 AT3G19010 32.143 308 152 6 11 305 11 274 2.95e-46 160
MsG0880045643.01.T01 AT3G60290 32.143 280 183 6 18 294 29 304 3.53e-46 161
MsG0880045643.01.T01 AT3G19010 34.470 264 146 5 11 261 11 260 2.82e-45 157
MsG0880045643.01.T01 AT1G04380 35.793 271 161 6 39 305 45 306 3.13e-45 159
MsG0880045643.01.T01 AT4G25310 29.970 337 223 8 4 333 13 343 3.66e-45 159
MsG0880045643.01.T01 AT5G59540 33.212 274 171 5 38 305 60 327 4.16e-45 159
MsG0880045643.01.T01 AT4G25300 29.080 337 229 8 4 333 13 346 6.29e-45 158
MsG0880045643.01.T01 AT5G51810 33.657 309 174 5 10 303 36 328 6.91e-45 159
MsG0880045643.01.T01 AT1G60980 34.266 286 175 6 38 312 56 339 1.15e-44 158
MsG0880045643.01.T01 AT4G25420 32.558 301 192 4 10 303 34 330 1.15e-44 158
MsG0880045643.01.T01 AT5G05600 35.206 267 164 6 3 262 23 287 1.19e-44 155
MsG0880045643.01.T01 AT1G15550 32.404 287 184 5 50 329 60 343 3.24e-44 156
MsG0880045643.01.T01 AT2G44800 31.655 278 183 6 20 294 31 304 6.47e-44 155
MsG0880045643.01.T01 AT3G13610 30.990 313 193 10 14 316 36 335 9.01e-44 155
MsG0880045643.01.T01 AT1G17010 31.186 295 196 6 15 305 28 319 2.39e-43 154
MsG0880045643.01.T01 AT1G78550 32.422 256 169 4 71 324 6 259 4.20e-43 151
MsG0880045643.01.T01 AT1G03410 35.448 268 156 8 39 297 57 316 1.26e-42 152
MsG0880045643.01.T01 AT5G43440 32.103 271 174 6 39 305 62 326 2.80e-42 151
MsG0880045643.01.T01 AT1G03410 35.448 268 156 8 39 297 94 353 2.95e-42 152
MsG0880045643.01.T01 AT5G59530 33.091 275 171 6 38 305 57 325 4.76e-42 150
MsG0880045643.01.T01 AT1G06620 33.083 266 151 4 38 292 61 310 1.01e-41 150
MsG0880045643.01.T01 AT3G55970 32.353 272 170 7 3 262 10 279 3.74e-41 147
MsG0880045643.01.T01 AT1G05010 33.333 270 164 8 39 303 4 262 4.15e-41 147
MsG0880045643.01.T01 AT5G07480 30.976 297 183 9 11 294 16 303 5.17e-41 147
MsG0880045643.01.T01 AT5G20550 30.496 282 180 6 34 304 35 311 5.52e-41 147
MsG0880045643.01.T01 AT5G07200 33.091 275 173 3 38 303 57 329 5.59e-41 148
MsG0880045643.01.T01 AT1G03400 37.963 216 127 3 47 261 56 265 1.32e-40 147
MsG0880045643.01.T01 AT5G63600 32.028 281 170 7 38 312 32 297 1.48e-40 145
MsG0880045643.01.T01 AT4G21690 31.475 305 186 6 10 304 23 314 1.83e-40 146
MsG0880045643.01.T01 AT3G12900 34.470 264 159 8 47 304 61 316 2.86e-40 145
MsG0880045643.01.T01 AT5G43450 32.601 273 168 8 39 305 61 323 5.57e-40 145
MsG0880045643.01.T01 AT5G63590 31.673 281 170 7 34 304 8 276 8.10e-40 143
MsG0880045643.01.T01 AT1G80330 30.499 341 198 10 10 327 13 337 8.61e-40 144
MsG0880045643.01.T01 AT1G77330 32.069 290 172 9 39 317 3 278 1.66e-39 142
MsG0880045643.01.T01 AT5G63600 31.915 282 170 8 38 312 32 298 1.86e-39 143
MsG0880045643.01.T01 AT5G54000 33.203 256 165 5 51 304 60 311 2.46e-39 143
MsG0880045643.01.T01 AT1G04350 32.292 288 174 10 26 305 47 321 8.22e-39 142
MsG0880045643.01.T01 AT1G80340 32.323 297 188 7 50 336 53 346 2.27e-38 140
MsG0880045643.01.T01 AT1G49390 31.618 272 174 7 38 303 44 309 2.27e-38 140
MsG0880045643.01.T01 AT1G06645 33.210 271 163 7 39 302 77 336 3.25e-38 140
MsG0880045643.01.T01 AT5G20400 30.627 271 180 5 38 304 44 310 6.10e-38 139
MsG0880045643.01.T01 AT1G62380 31.481 270 170 7 38 303 6 264 6.55e-38 139
MsG0880045643.01.T01 AT5G12270 31.373 306 197 5 4 304 21 318 1.10e-37 139
MsG0880045643.01.T01 AT5G59540 34.361 227 140 3 38 261 60 280 1.17e-37 137
MsG0880045643.01.T01 AT1G06650 32.046 259 163 6 39 292 64 314 2.34e-37 138
MsG0880045643.01.T01 AT1G12010 30.000 270 174 7 38 303 6 264 6.47e-37 136
MsG0880045643.01.T01 AT1G04380 36.161 224 133 4 39 261 45 259 1.22e-36 134
MsG0880045643.01.T01 AT1G06640 32.000 275 171 8 39 305 64 330 3.16e-36 135
MsG0880045643.01.T01 AT1G06620 34.043 235 128 4 38 261 61 279 8.97e-36 132
MsG0880045643.01.T01 AT2G30840 31.273 275 173 9 39 305 57 323 1.53e-35 133
MsG0880045643.01.T01 AT3G61400 32.975 279 165 9 25 292 49 316 2.42e-35 133
MsG0880045643.01.T01 AT5G63595 30.483 269 156 7 36 301 22 262 3.50e-35 130
MsG0880045643.01.T01 AT2G30830 30.263 304 196 9 38 333 53 348 4.72e-35 132
MsG0880045643.01.T01 AT5G51810 31.660 259 162 4 10 261 36 286 5.19e-35 130
MsG0880045643.01.T01 AT5G43440 32.589 224 144 4 39 261 62 279 1.30e-34 129
MsG0880045643.01.T01 AT4G21200 31.461 267 169 6 38 301 41 296 1.78e-34 130
MsG0880045643.01.T01 AT4G25420 30.502 259 169 4 10 261 34 288 3.36e-34 128
MsG0880045643.01.T01 AT5G54000 32.618 233 153 4 74 304 1 231 7.43e-34 126
MsG0880045643.01.T01 AT2G19590 31.522 276 161 9 38 303 10 267 2.02e-33 126
MsG0880045643.01.T01 AT2G25450 30.769 273 177 6 39 305 55 321 3.65e-33 127
MsG0880045643.01.T01 AT1G30040 29.352 293 186 9 27 304 6 292 4.68e-33 126
MsG0880045643.01.T01 AT1G78440 26.748 329 213 10 39 350 10 327 1.48e-32 124
MsG0880045643.01.T01 AT1G44090 30.693 303 195 8 38 329 62 360 1.51e-32 125
MsG0880045643.01.T01 AT1G49390 31.197 234 153 5 74 303 1 230 1.92e-32 122
MsG0880045643.01.T01 AT2G30840 30.909 275 168 10 39 305 57 317 1.93e-32 125
MsG0880045643.01.T01 AT1G06650 33.040 227 140 5 39 261 64 282 2.05e-32 124
MsG0880045643.01.T01 AT5G43450 33.186 226 138 6 39 261 61 276 2.78e-32 122
MsG0880045643.01.T01 AT1G06640 33.040 227 140 5 39 261 64 282 1.59e-31 120
MsG0880045643.01.T01 AT5G63580 34.222 225 139 3 39 261 19 236 2.27e-31 119
MsG0880045643.01.T01 AT5G63580 34.222 225 139 3 39 261 19 236 3.32e-31 119
MsG0880045643.01.T01 AT1G06640 33.040 227 140 5 39 261 64 282 3.37e-31 120
MsG0880045643.01.T01 AT5G43935 28.105 306 183 9 35 332 15 291 8.06e-31 119
MsG0880045643.01.T01 AT4G25310 27.381 336 205 9 4 333 13 315 1.08e-30 119
MsG0880045643.01.T01 AT1G47990 28.707 317 192 10 38 337 14 313 1.34e-30 119
MsG0880045643.01.T01 AT3G61400 33.603 247 143 8 25 261 49 284 1.17e-29 115
MsG0880045643.01.T01 AT2G30840 31.579 228 143 6 39 261 57 276 8.37e-29 114
MsG0880045643.01.T01 AT3G50210 30.597 268 167 6 56 306 33 298 2.24e-28 113
MsG0880045643.01.T01 AT3G50210 30.597 268 167 6 56 306 33 298 2.24e-28 113
MsG0880045643.01.T01 AT3G50210 30.597 268 167 6 56 306 33 298 2.24e-28 113
MsG0880045643.01.T01 AT3G49630 29.252 294 184 8 34 306 4 294 2.36e-27 110
MsG0880045643.01.T01 AT5G07480 33.152 184 110 5 123 298 20 198 2.55e-27 108
MsG0880045643.01.T01 AT3G49630 30.112 269 172 6 51 306 25 290 5.57e-27 109
MsG0880045643.01.T01 AT2G34555 29.455 275 171 10 39 304 27 287 9.08e-27 108
MsG0880045643.01.T01 AT1G50960 27.899 276 186 5 38 307 39 307 3.02e-26 107
MsG0880045643.01.T01 AT3G49620 28.763 299 177 8 35 306 30 319 3.11e-26 108
MsG0880045643.01.T01 AT2G19590 31.276 243 141 8 71 303 26 252 3.17e-26 106
MsG0880045643.01.T01 AT4G25300 32.240 183 119 5 154 333 72 252 1.47e-25 104
MsG0880045643.01.T01 AT1G30040 29.200 250 156 9 27 261 6 249 6.51e-24 99.8
MsG0880045643.01.T01 AT1G14130 27.240 279 188 5 60 333 25 293 1.47e-23 99.8
MsG0880045643.01.T01 AT3G46500 26.646 319 205 9 36 334 9 318 4.91e-23 98.6
MsG0880045643.01.T01 AT4G23340 30.705 241 144 10 64 292 30 259 2.33e-21 94.0
MsG0880045643.01.T01 AT4G16765 34.884 172 102 6 139 301 42 212 3.77e-20 88.6
MsG0880045643.01.T01 AT4G16765 34.884 172 102 6 139 301 42 212 3.95e-20 89.0
MsG0880045643.01.T01 AT4G16765 34.884 172 102 6 139 301 42 212 3.95e-20 89.0
MsG0880045643.01.T01 AT4G16765 34.884 172 102 6 139 301 42 212 3.95e-20 89.0
MsG0880045643.01.T01 AT1G14120 26.144 306 194 8 39 333 8 292 7.32e-20 89.4
MsG0880045643.01.T01 AT1G14120 26.144 306 194 8 39 333 8 292 7.32e-20 89.4
MsG0880045643.01.T01 AT1G14120 26.144 306 194 8 39 333 8 292 7.32e-20 89.4
MsG0880045643.01.T01 AT5G51310 26.531 245 160 5 63 292 24 263 7.34e-20 89.7
MsG0880045643.01.T01 AT1G02400 26.333 300 197 10 54 338 34 324 8.17e-20 89.7
MsG0880045643.01.T01 AT3G46500 26.740 273 185 8 36 295 9 279 8.74e-20 89.0
MsG0880045643.01.T01 AT3G46490 26.250 320 186 10 39 324 12 315 2.47e-19 88.2
MsG0880045643.01.T01 AT3G50210 34.731 167 104 2 145 306 50 216 3.95e-19 86.3
MsG0880045643.01.T01 AT3G49630 34.356 163 105 2 145 306 60 221 7.99e-19 85.5
MsG0880045643.01.T01 AT5G58660 24.068 295 175 9 39 301 34 311 6.97e-17 81.3
MsG0880045643.01.T01 AT3G46490 26.573 286 160 10 39 290 12 281 1.06e-16 80.5
MsG0880045643.01.T01 AT1G35190 25.597 293 181 8 41 317 9 280 1.70e-16 79.7
MsG0880045643.01.T01 AT4G16765 35.664 143 83 5 139 272 42 184 2.99e-16 76.6
MsG0880045643.01.T01 AT1G35190 26.510 298 195 9 41 317 9 303 8.91e-16 77.8
MsG0880045643.01.T01 AT1G52820 25.180 278 183 7 57 323 32 295 1.85e-15 76.6
MsG0880045643.01.T01 AT4G16770 27.039 233 152 6 38 257 21 248 3.79e-15 75.1
MsG0880045643.01.T01 AT4G23340 43.529 85 47 1 208 292 58 141 1.53e-14 72.4
MsG0880045643.01.T01 AT4G16765 42.268 97 52 2 212 305 75 170 7.94e-14 70.1
MsG0880045643.01.T01 AT3G46500 28.061 196 132 5 147 334 50 244 1.93e-13 70.1
MsG0880045643.01.T01 AT3G46500 28.061 196 132 5 147 334 50 244 1.93e-13 70.1
MsG0880045643.01.T01 AT1G02400 26.724 232 146 9 54 271 34 255 5.04e-12 65.9
MsG0880045643.01.T01 AT3G46500 33.871 124 78 2 214 334 60 182 1.96e-11 62.8
MsG0880045643.01.T01 AT2G06960 37.288 118 53 5 181 294 8 108 2.70e-11 61.6

Find 90 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAGTCTCTTTGTTTAAT+TGG 0.126342 8:+62096592 None:intergenic
TTGCATCTGGTGCTGGATTT+TGG 0.194340 8:+62095186 None:intergenic
TGACCTTTCCGGTGGTAAAA+AGG 0.224187 8:-62097370 MsG0880045643.01.T01:CDS
TACATTTCAGCAAAAGTAAT+TGG 0.229490 8:+62095113 None:intergenic
AAGCTTCGGTTTGACCTTTC+CGG 0.242868 8:-62097381 MsG0880045643.01.T01:CDS
TTCCATCCTTCAGGCTTGTT+TGG 0.257143 8:+62096562 None:intergenic
AAATGATTGTATGCAACTTT+TGG 0.287049 8:+62097600 None:intergenic
AGGTCAGGTTGAGGGCATTT+TGG 0.288787 8:+62096394 None:intergenic
AACAAAAGCATGTGTTGATA+TGG 0.290834 8:-62096443 MsG0880045643.01.T01:CDS
AAGAATCTCATTCAATGGTT+TGG 0.305842 8:+62094992 None:intergenic
GTCACCTCTTTCCATCCTTC+AGG 0.314810 8:+62096553 None:intergenic
CTACACCATGATCAACAATT+TGG 0.326013 8:+62097469 None:intergenic
AATAGTCTCTTTGTTTAATT+GGG 0.340915 8:+62096593 None:intergenic
ATTCCAATCATTTCTCTTGC+CGG 0.346312 8:-62097567 MsG0880045643.01.T01:CDS
AGAATCTCATTCAATGGTTT+GGG 0.358688 8:+62094993 None:intergenic
GCCATCAACATCGTCGATTC+CGG 0.368825 8:+62097548 None:intergenic
GTTGTCAATATTGGAGATCA+TGG 0.376692 8:-62096238 MsG0880045643.01.T01:CDS
CCCTCGAGTCTAGCTTCATT+CGG 0.378840 8:-62097638 MsG0880045643.01.T01:CDS
CTTCAAGCTACCAGAGATAA+TGG 0.393779 8:-62096301 MsG0880045643.01.T01:CDS
AGATGACCCGTTTGGCTAAA+GGG 0.396886 8:-62097428 MsG0880045643.01.T01:CDS
TTGTGGAGGCTTGTGAGAAC+TGG 0.414807 8:-62097500 MsG0880045643.01.T01:CDS
CATTATCTCTGGTAGCTTGA+AGG 0.420066 8:+62096302 None:intergenic
ATCTTCCAAATTGTTGATCA+TGG 0.422841 8:-62097474 MsG0880045643.01.T01:CDS
ACAACAAAAGCACCTTCAAT+TGG 0.424380 8:+62096256 None:intergenic
AGAAGTGTTATCTGAGGCTA+TGG 0.453688 8:-62096485 MsG0880045643.01.T01:CDS
GTCGTTTCAGTCCAAGAGTT+AGG 0.454370 8:+62096374 None:intergenic
AGGGAGAACCAGTGAAGGAT+TGG 0.456188 8:-62096642 MsG0880045643.01.T01:CDS
CCTCGAGTCTAGCTTCATTC+GGG 0.457149 8:-62097637 MsG0880045643.01.T01:CDS
TAAGCAAGAATCTCATTCAA+TGG 0.462100 8:+62094987 None:intergenic
GGAATGTTGCTATTGATAAA+CGG 0.464152 8:+62095207 None:intergenic
AAAGGGTACACAGTTGCATC+TGG 0.468214 8:+62095173 None:intergenic
ATCTCTCTCCAATCCTTCAC+TGG 0.469429 8:+62096634 None:intergenic
GAGATGACCCGTTTGGCTAA+AGG 0.474106 8:-62097429 MsG0880045643.01.T01:CDS
TACACAGTTGCATCTGGTGC+TGG 0.475425 8:+62095179 None:intergenic
AAAGAACCCTTTAGCCAAAC+GGG 0.480120 8:+62097422 None:intergenic
TTCAGTCCAAGAGTTAGGTC+AGG 0.484820 8:+62096379 None:intergenic
TATTGATAAACGGCTGTAGT+TGG 0.490552 8:+62095217 None:intergenic
AGCAATAGAGTAATGGTGCC+AGG 0.491479 8:+62096343 None:intergenic
TACCACCGGAGGAGAAGCTT+CGG 0.491567 8:-62097395 MsG0880045643.01.T01:CDS
TCTCCATCTCTAATCTTCAA+AGG 0.494530 8:+62095155 None:intergenic
GCCGGAATCGACGATGTTGA+TGG 0.495190 8:-62097549 MsG0880045643.01.T01:CDS
CATTGCTGAGATGACCCGTT+TGG 0.495758 8:-62097436 MsG0880045643.01.T01:CDS
CAAAGAACCCTTTAGCCAAA+CGG 0.497820 8:+62097421 None:intergenic
CTCCATCTCTAATCTTCAAA+GGG 0.500771 8:+62095156 None:intergenic
ATTACTGTTAAGCCAATTGA+AGG 0.500874 8:-62096268 MsG0880045643.01.T01:CDS
CTATTGCTTCAAGACCTAGT+TGG 0.505718 8:-62096328 MsG0880045643.01.T01:CDS
CCTCAACCTGACCTAACTCT+TGG 0.509339 8:-62096385 MsG0880045643.01.T01:CDS
TTGCTTCAAGACCTAGTTGG+TGG 0.512776 8:-62096325 MsG0880045643.01.T01:CDS
GAAGTGTTATCTGAGGCTAT+GGG 0.514714 8:-62096484 MsG0880045643.01.T01:CDS
CCAAGAGTTAGGTCAGGTTG+AGG 0.516974 8:+62096385 None:intergenic
TGTTGCAAGTCTCTATTCTA+CGG 0.520035 8:+62097526 None:intergenic
CTGAAACGACACACTGACCC+TGG 0.530248 8:-62096361 MsG0880045643.01.T01:CDS
ATTCCGGCAAGAGAAATGAT+TGG 0.532242 8:+62097564 None:intergenic
TAGCTTCTCACTGTATTGCT+CGG 0.532341 8:+62096531 None:intergenic
GCAAGGACCTTGAGATTGCT+AGG 0.538193 8:-62095076 MsG0880045643.01.T01:CDS
TTAAACAAAGAGACTATTCA+AGG 0.538926 8:-62096588 MsG0880045643.01.T01:CDS
AGATGGAGAGAAATCTGTGA+TGG 0.543571 8:-62095141 MsG0880045643.01.T01:CDS
TAGGATGAAGACGCTGGCTA+AGG 0.544150 8:-62095057 MsG0880045643.01.T01:CDS
TACCCTTTGAAGATTAGAGA+TGG 0.545506 8:-62095158 MsG0880045643.01.T01:CDS
TCAAACCGAAGCTTCTCCTC+CGG 0.547636 8:+62097390 None:intergenic
TAGCTTGAAGGCCACCAACT+AGG 0.547675 8:+62096314 None:intergenic
CAAGAGTTAGGTCAGGTTGA+GGG 0.550765 8:+62096386 None:intergenic
AGGGTTCTTTGATTTACCAC+CGG 0.558911 8:-62097409 MsG0880045643.01.T01:CDS
AGTTGGAATTCACCACTGCT+TGG 0.567113 8:+62095234 None:intergenic
AGAGACTTGCAACAAGATTG+TGG 0.571839 8:-62097517 MsG0880045643.01.T01:CDS
TGTATGCAGTATCTAAGTAA+TGG 0.572840 8:-62095278 MsG0880045643.01.T01:intron
GGCCAAACAAGCCTGAAGGA+TGG 0.573620 8:-62096564 MsG0880045643.01.T01:CDS
TGTGGAGGCTTGTGAGAACT+GGG 0.586960 8:-62097499 MsG0880045643.01.T01:CDS
GTCTTGAAGCAATAGAGTAA+TGG 0.595794 8:+62096336 None:intergenic
CAAGCCTGAAGGATGGAAAG+AGG 0.598291 8:-62096557 MsG0880045643.01.T01:CDS
CCCGAATGAAGCTAGACTCG+AGG 0.602991 8:+62097637 None:intergenic
TGCAGTATCTAAGTAATGGA+CGG 0.608604 8:-62095274 MsG0880045643.01.T01:intron
GCAATAGAGTAATGGTGCCA+GGG 0.611285 8:+62096344 None:intergenic
AGAACTTAGGGACCTACAGA+AGG 0.616594 8:-62095027 MsG0880045643.01.T01:CDS
TTTACAGGGAGAACCAGTGA+AGG 0.617648 8:-62096647 MsG0880045643.01.T01:intron
TCTTCATCCTAGCAATCTCA+AGG 0.621342 8:+62095069 None:intergenic
AGGTGGCCAAACAAGCCTGA+AGG 0.623884 8:-62096568 MsG0880045643.01.T01:CDS
CCGAATGAAGCTAGACTCGA+GGG 0.624298 8:+62097638 None:intergenic
AACCGAAGCTTCTCCTCCGG+TGG 0.628159 8:+62097393 None:intergenic
CTTCGGTTTGACCTTTCCGG+TGG 0.630933 8:-62097378 MsG0880045643.01.T01:CDS
GTATAGGAGGAAAATGAGCA+AGG 0.641286 8:-62095093 MsG0880045643.01.T01:CDS
GATTGCTAGGATGAAGACGC+TGG 0.644526 8:-62095063 MsG0880045643.01.T01:CDS
GCTATTAGAAGTGTTATCTG+AGG 0.649643 8:-62096491 MsG0880045643.01.T01:CDS
AAGTGTTATCTGAGGCTATG+GGG 0.652343 8:-62096483 MsG0880045643.01.T01:CDS
CCAGAGATAATGGTAAAACG+TGG 0.652898 8:-62096291 MsG0880045643.01.T01:CDS
GTTCTTTGATTTACCACCGG+AGG 0.659991 8:-62097406 MsG0880045643.01.T01:CDS
AAATGCTGATCACCAAGCAG+TGG 0.664697 8:-62095246 MsG0880045643.01.T01:CDS
GACTTGCAACAAGATTGTGG+AGG 0.698738 8:-62097514 MsG0880045643.01.T01:CDS
AACAAAGAGACTATTCAAGG+TGG 0.723276 8:-62096585 MsG0880045643.01.T01:CDS
GTGGAGGCTTGTGAGAACTG+GGG 0.764612 8:-62097498 MsG0880045643.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATAATATATCTAATA+TGG + Chr8:62095795-62095814 None:intergenic 10.0%
!! TAATACTAAAATTATTAGAA+GGG - Chr8:62096773-62096792 MsG0880045643.01.T01:intron 10.0%
!!! CATATTAGATATATTATTTT+TGG - Chr8:62095793-62095812 MsG0880045643.01.T01:intron 10.0%
!!! TGCAAATTATTTTTTTTTTA+AGG - Chr8:62096471-62096490 MsG0880045643.01.T01:CDS 10.0%
!! AAAACTTACCAAAAATATTA+GGG - Chr8:62095753-62095772 MsG0880045643.01.T01:intron 15.0%
!! AAATTATCCTTATTAACTAT+TGG + Chr8:62097041-62097060 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - Chr8:62097040-62097059 MsG0880045643.01.T01:intron 15.0%
!! ATGAGTTTATCTAAAAAAAT+TGG + Chr8:62095496-62095515 None:intergenic 15.0%
!! ATTCATCTAACTAATAATTA+TGG - Chr8:62095899-62095918 MsG0880045643.01.T01:intron 15.0%
!! CTAATACTAAAATTATTAGA+AGG - Chr8:62096772-62096791 MsG0880045643.01.T01:intron 15.0%
!! TAAAACTTACCAAAAATATT+AGG - Chr8:62095752-62095771 MsG0880045643.01.T01:intron 15.0%
!! TGAGTTTATCTAAAAAAATT+GGG + Chr8:62095495-62095514 None:intergenic 15.0%
!!! ATGTTAGTTTGATATATATT+TGG + Chr8:62095608-62095627 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + Chr8:62096914-62096933 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + Chr8:62097017-62097036 None:intergenic 15.0%
!! AAACTAACCAATAGTTAATA+AGG - Chr8:62097031-62097050 MsG0880045643.01.T01:intron 20.0%
!! AATAATAATCAAATATGGCA+AGG + Chr8:62095961-62095980 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr8:62096954-62096973 None:intergenic 20.0%
!! AGTGTTAATAGAAGAAAATT+TGG + Chr8:62095356-62095375 None:intergenic 20.0%
!! ATGGGAATAATAATCAAATA+TGG + Chr8:62095966-62095985 None:intergenic 20.0%
!! CATTCATAAAAAAATGGAAT+GGG + Chr8:62095926-62095945 None:intergenic 20.0%
!! GTAACAAAATATAAGCAAAA+TGG + Chr8:62095524-62095543 None:intergenic 20.0%
!! TTAAGGTAGTGTATAATAAA+TGG - Chr8:62097185-62097204 MsG0880045643.01.T01:intron 20.0%
!! TTATACACTACCTTAATTTA+TGG + Chr8:62097181-62097200 None:intergenic 20.0%
!!! AAATCATTGAAAATGGTTTT+AGG - Chr8:62097240-62097259 MsG0880045643.01.T01:intron 20.0%
!!! AATAGTCTCTTTGTTTAATT+GGG + Chr8:62096077-62096096 None:intergenic 20.0%
!!! ACATGGAAATAATTTTTTAC+AGG - Chr8:62096005-62096024 MsG0880045643.01.T01:intron 20.0%
!!! ACTATTTGTTGTAAAAAGAT+GGG - Chr8:62095725-62095744 MsG0880045643.01.T01:intron 20.0%
!!! AGGGAGTATTATTTTTTTTT+GGG + Chr8:62096865-62096884 None:intergenic 20.0%
!!! ATAGAGAATATTTTATTGCA+TGG - Chr8:62096639-62096658 MsG0880045643.01.T01:CDS 20.0%
!!! ATTTTGGTTTTAGATTAGAA+TGG - Chr8:62095630-62095649 MsG0880045643.01.T01:intron 20.0%
!!! CATGGAAATAATTTTTTACA+GGG - Chr8:62096006-62096025 MsG0880045643.01.T01:intron 20.0%
!!! CTTTTTACAACAAATAGTAA+AGG + Chr8:62095723-62095742 None:intergenic 20.0%
!!! TACTATTTGTTGTAAAAAGA+TGG - Chr8:62095724-62095743 MsG0880045643.01.T01:intron 20.0%
!!! TGATTTGCGAAAATTTAAAT+TGG + Chr8:62097226-62097245 None:intergenic 20.0%
! AAAGTCTACAAAATTCTTCA+GGG + Chr8:62096801-62096820 None:intergenic 25.0%
! AAATAGTAAAGGTTCATCTT+TGG + Chr8:62095712-62095731 None:intergenic 25.0%
! AGTAGATACTCCATAAATTA+AGG - Chr8:62097168-62097187 MsG0880045643.01.T01:intron 25.0%
! AGTTGGCATTCATAAAAAAA+TGG + Chr8:62095932-62095951 None:intergenic 25.0%
! CAATAACAGCAAATCATAAA+AGG + Chr8:62097323-62097342 None:intergenic 25.0%
! GCATTCATAAAAAAATGGAA+TGG + Chr8:62095927-62095946 None:intergenic 25.0%
! TAAGGAAGAAAAAGAACTTA+GGG - Chr8:62097628-62097647 MsG0880045643.01.T01:CDS 25.0%
! TACATTTCAGCAAAAGTAAT+TGG + Chr8:62097557-62097576 None:intergenic 25.0%
! TGTGTCAACATCTAAAAAAA+TGG - Chr8:62095685-62095704 MsG0880045643.01.T01:intron 25.0%
! TTAAACAAAGAGACTATTCA+AGG - Chr8:62096079-62096098 MsG0880045643.01.T01:intron 25.0%
!! AAATGATTGTATGCAACTTT+TGG + Chr8:62095070-62095089 None:intergenic 25.0%
!! AACATTATTTCAAGAAGTGT+TGG - Chr8:62097263-62097282 MsG0880045643.01.T01:intron 25.0%
!! GAATAGTCTCTTTGTTTAAT+TGG + Chr8:62096078-62096097 None:intergenic 25.0%
!! TAGGTAAACCCTAATATTTT+TGG + Chr8:62095764-62095783 None:intergenic 25.0%
!! TATCAAACTAACATGCATTT+TGG - Chr8:62095614-62095633 MsG0880045643.01.T01:intron 25.0%
!! TTTTCGCAAATCATTGAAAA+TGG - Chr8:62097233-62097252 MsG0880045643.01.T01:intron 25.0%
!!! GAGGGAGTATTATTTTTTTT+TGG + Chr8:62096866-62096885 None:intergenic 25.0%
!!! TTACTTTTGCTGAAATGTAT+AGG - Chr8:62097558-62097577 MsG0880045643.01.T01:CDS 25.0%
AAGAATCTCATTCAATGGTT+TGG + Chr8:62097678-62097697 None:intergenic 30.0%
AGAATCTCATTCAATGGTTT+GGG + Chr8:62097677-62097696 None:intergenic 30.0%
ATCTAATATGGATCTGATCT+AGG + Chr8:62095783-62095802 None:intergenic 30.0%
ATCTTCCAAATTGTTGATCA+TGG - Chr8:62095193-62095212 MsG0880045643.01.T01:CDS 30.0%
ATTACTGTTAAGCCAATTGA+AGG - Chr8:62096399-62096418 MsG0880045643.01.T01:CDS 30.0%
CAAAGTCTACAAAATTCTTC+AGG + Chr8:62096802-62096821 None:intergenic 30.0%
CACTATACGACAATCATAAT+GGG + Chr8:62095984-62096003 None:intergenic 30.0%
CTAAGGAAGAAAAAGAACTT+AGG - Chr8:62097627-62097646 MsG0880045643.01.T01:CDS 30.0%
TAAGCAAGAATCTCATTCAA+TGG + Chr8:62097683-62097702 None:intergenic 30.0%
TCACTATACGACAATCATAA+TGG + Chr8:62095985-62096004 None:intergenic 30.0%
TGTATGCAGTATCTAAGTAA+TGG - Chr8:62097389-62097408 MsG0880045643.01.T01:CDS 30.0%
! AACAAAAGCATGTGTTGATA+TGG - Chr8:62096224-62096243 MsG0880045643.01.T01:intron 30.0%
! AGATATTTGAGAGTTTTCAC+TGG + Chr8:62094995-62095014 None:intergenic 30.0%
! ATGATAGATGCAAGATTTTG+AGG + Chr8:62095403-62095422 None:intergenic 30.0%
! GGAATGTTGCTATTGATAAA+CGG + Chr8:62097463-62097482 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr8:62097123-62097142 MsG0880045643.01.T01:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + Chr8:62096888-62096907 None:intergenic 30.0%
!! ATGATTTGCTGTTATTGCAT+GGG - Chr8:62097326-62097345 MsG0880045643.01.T01:intron 30.0%
!! TATGATTTGCTGTTATTGCA+TGG - Chr8:62097325-62097344 MsG0880045643.01.T01:intron 30.0%
!! TGATTTGTTTAATTTGCTCG+TGG - Chr8:62097366-62097385 MsG0880045643.01.T01:CDS 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr8:62097122-62097141 None:intergenic 30.0%
AAAAAGTTCAATTCCACGTG+TGG + Chr8:62096715-62096734 None:intergenic 35.0%
AACAAAGAGACTATTCAAGG+TGG - Chr8:62096082-62096101 MsG0880045643.01.T01:intron 35.0%
ATTCCAATCATTTCTCTTGC+CGG - Chr8:62095100-62095119 MsG0880045643.01.T01:CDS 35.0%
CGAAAGAATATGTGTGTTTG+CGG - Chr8:62095543-62095562 MsG0880045643.01.T01:intron 35.0%
CTACACCATGATCAACAATT+TGG + Chr8:62095201-62095220 None:intergenic 35.0%
CTCCATCTCTAATCTTCAAA+GGG + Chr8:62097514-62097533 None:intergenic 35.0%
GTCTTGAAGCAATAGAGTAA+TGG + Chr8:62096334-62096353 None:intergenic 35.0%
GTTGTCAATATTGGAGATCA+TGG - Chr8:62096429-62096448 MsG0880045643.01.T01:CDS 35.0%
TATTGATAAACGGCTGTAGT+TGG + Chr8:62097453-62097472 None:intergenic 35.0%
TCTCCATCTCTAATCTTCAA+AGG + Chr8:62097515-62097534 None:intergenic 35.0%
TGATTGTCGTATAGTGAACA+TGG - Chr8:62095988-62096007 MsG0880045643.01.T01:intron 35.0%
TGGAAAAGAGTAGGTGAATA+TGG - Chr8:62097283-62097302 MsG0880045643.01.T01:intron 35.0%
TGTTGCAAGTCTCTATTCTA+CGG + Chr8:62095144-62095163 None:intergenic 35.0%
! CTTTTGCTGAAATGTATAGG+AGG - Chr8:62097561-62097580 MsG0880045643.01.T01:CDS 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + Chr8:62096992-62097011 None:intergenic 35.0%
! TACCCTTTGAAGATTAGAGA+TGG - Chr8:62097509-62097528 MsG0880045643.01.T01:CDS 35.0%
! TGCAGTATCTAAGTAATGGA+CGG - Chr8:62097393-62097412 MsG0880045643.01.T01:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + Chr8:62096988-62097007 None:intergenic 35.0%
!! AAGAAGTGTTGGAAAAGAGT+AGG - Chr8:62097274-62097293 MsG0880045643.01.T01:intron 35.0%
!! ACAACAAAAGCACCTTCAAT+TGG + Chr8:62096414-62096433 None:intergenic 35.0%
!! GCTATTAGAAGTGTTATCTG+AGG - Chr8:62096176-62096195 MsG0880045643.01.T01:intron 35.0%
!! GGTGCTTTTGTTGTCAATAT+TGG - Chr8:62096420-62096439 MsG0880045643.01.T01:CDS 35.0%
AAAGAACCCTTTAGCCAAAC+GGG + Chr8:62095248-62095267 None:intergenic 40.0%
AGAGACTTGCAACAAGATTG+TGG - Chr8:62095150-62095169 MsG0880045643.01.T01:CDS 40.0%
AGATGGAGAGAAATCTGTGA+TGG - Chr8:62097526-62097545 MsG0880045643.01.T01:CDS 40.0%
ATAAATGGTCACACTTCACG+TGG - Chr8:62097200-62097219 MsG0880045643.01.T01:intron 40.0%
ATATGGCAAGGAACATGAGT+TGG + Chr8:62095949-62095968 None:intergenic 40.0%
ATTCCGGCAAGAGAAATGAT+TGG + Chr8:62095106-62095125 None:intergenic 40.0%
CAAAGAACCCTTTAGCCAAA+CGG + Chr8:62095249-62095268 None:intergenic 40.0%
CATTATCTCTGGTAGCTTGA+AGG + Chr8:62096368-62096387 None:intergenic 40.0%
CTATTGCTTCAAGACCTAGT+TGG - Chr8:62096339-62096358 MsG0880045643.01.T01:CDS 40.0%
CTTCAAGCTACCAGAGATAA+TGG - Chr8:62096366-62096385 MsG0880045643.01.T01:CDS 40.0%
GAATATGTGTGTTTGCGGTT+CGG - Chr8:62095548-62095567 MsG0880045643.01.T01:intron 40.0%
GATATTGTATGTTCCACACG+TGG - Chr8:62096699-62096718 MsG0880045643.01.T01:intron 40.0%
GTATAGGAGGAAAATGAGCA+AGG - Chr8:62097574-62097593 MsG0880045643.01.T01:CDS 40.0%
TAGCTTCTCACTGTATTGCT+CGG + Chr8:62096139-62096158 None:intergenic 40.0%
TCTTCATCCTAGCAATCTCA+AGG + Chr8:62097601-62097620 None:intergenic 40.0%
! AAGTGTTATCTGAGGCTATG+GGG - Chr8:62096184-62096203 MsG0880045643.01.T01:intron 40.0%
! AGGGTTCTTTGATTTACCAC+CGG - Chr8:62095258-62095277 MsG0880045643.01.T01:CDS 40.0%
! CCACGTTTTACCATTATCTC+TGG + Chr8:62096379-62096398 None:intergenic 40.0%
! CCAGAGATAATGGTAAAACG+TGG - Chr8:62096376-62096395 MsG0880045643.01.T01:CDS 40.0%
! GAAGTGTTATCTGAGGCTAT+GGG - Chr8:62096183-62096202 MsG0880045643.01.T01:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + Chr8:62096989-62097008 None:intergenic 40.0%
!! AGAAGTGTTATCTGAGGCTA+TGG - Chr8:62096182-62096201 MsG0880045643.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr8:62097127-62097146 MsG0880045643.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr8:62097146-62097127 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + Chr8:62096885-62096904 None:intergenic 40.0%
AAATGCTGATCACCAAGCAG+TGG - Chr8:62097421-62097440 MsG0880045643.01.T01:CDS 45.0%
AGAACTTAGGGACCTACAGA+AGG - Chr8:62097640-62097659 MsG0880045643.01.T01:CDS 45.0%
AGATGACCCGTTTGGCTAAA+GGG - Chr8:62095239-62095258 MsG0880045643.01.T01:CDS 45.0%
AGCAATAGAGTAATGGTGCC+AGG + Chr8:62096327-62096346 None:intergenic 45.0%
AGTTGGAATTCACCACTGCT+TGG + Chr8:62097436-62097455 None:intergenic 45.0%
ATCTCTCTCCAATCCTTCAC+TGG + Chr8:62096036-62096055 None:intergenic 45.0%
GACCTTTCCGGTGGTAAAAA+GGG - Chr8:62095298-62095317 MsG0880045643.01.T01:intron 45.0%
GACTTGCAACAAGATTGTGG+AGG - Chr8:62095153-62095172 MsG0880045643.01.T01:CDS 45.0%
GTCGTTTCAGTCCAAGAGTT+AGG + Chr8:62096296-62096315 None:intergenic 45.0%
TGACCTTTCCGGTGGTAAAA+AGG - Chr8:62095297-62095316 MsG0880045643.01.T01:intron 45.0%
TTCAGTCCAAGAGTTAGGTC+AGG + Chr8:62096291-62096310 None:intergenic 45.0%
TTGCTTCAAGACCTAGTTGG+TGG - Chr8:62096342-62096361 MsG0880045643.01.T01:CDS 45.0%
TTTACAGGGAGAACCAGTGA+AGG - Chr8:62096020-62096039 MsG0880045643.01.T01:intron 45.0%
! AAAGGGTACACAGTTGCATC+TGG + Chr8:62097497-62097516 None:intergenic 45.0%
! AAGCTTCGGTTTGACCTTTC+CGG - Chr8:62095286-62095305 MsG0880045643.01.T01:intron 45.0%
! GCAATAGAGTAATGGTGCCA+GGG + Chr8:62096326-62096345 None:intergenic 45.0%
! GCTCAAGTTTTGCCTTCTGT+AGG + Chr8:62097655-62097674 None:intergenic 45.0%
! GTTCTTTGATTTACCACCGG+AGG - Chr8:62095261-62095280 MsG0880045643.01.T01:CDS 45.0%
! TTCCATCCTTCAGGCTTGTT+TGG + Chr8:62096108-62096127 None:intergenic 45.0%
!! CAAGAGTTAGGTCAGGTTGA+GGG + Chr8:62096284-62096303 None:intergenic 45.0%
!! TTGCATCTGGTGCTGGATTT+TGG + Chr8:62097484-62097503 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr8:62097126-62097145 MsG0880045643.01.T01:intron 45.0%
AGGGAGAACCAGTGAAGGAT+TGG - Chr8:62096025-62096044 MsG0880045643.01.T01:intron 50.0%
CAAGCCTGAAGGATGGAAAG+AGG - Chr8:62096110-62096129 MsG0880045643.01.T01:intron 50.0%
CATTGCTGAGATGACCCGTT+TGG - Chr8:62095231-62095250 MsG0880045643.01.T01:CDS 50.0%
CCGAATGAAGCTAGACTCGA+GGG + Chr8:62095032-62095051 None:intergenic 50.0%
CCTCAACCTGACCTAACTCT+TGG - Chr8:62096282-62096301 MsG0880045643.01.T01:CDS 50.0%
CTTTCCGGTGGTAAAAAGGG+TGG - Chr8:62095301-62095320 MsG0880045643.01.T01:intron 50.0%
GAGATGACCCGTTTGGCTAA+AGG - Chr8:62095238-62095257 MsG0880045643.01.T01:CDS 50.0%
GATTGCTAGGATGAAGACGC+TGG - Chr8:62097604-62097623 MsG0880045643.01.T01:CDS 50.0%
GCAAGGACCTTGAGATTGCT+AGG - Chr8:62097591-62097610 MsG0880045643.01.T01:CDS 50.0%
GTCACCTCTTTCCATCCTTC+AGG + Chr8:62096117-62096136 None:intergenic 50.0%
TACACAGTTGCATCTGGTGC+TGG + Chr8:62097491-62097510 None:intergenic 50.0%
TAGCTTGAAGGCCACCAACT+AGG + Chr8:62096356-62096375 None:intergenic 50.0%
TCAAACCGAAGCTTCTCCTC+CGG + Chr8:62095280-62095299 None:intergenic 50.0%
TGTGGAGGCTTGTGAGAACT+GGG - Chr8:62095168-62095187 MsG0880045643.01.T01:CDS 50.0%
TTGTGGAGGCTTGTGAGAAC+TGG - Chr8:62095167-62095186 MsG0880045643.01.T01:CDS 50.0%
! CACCCTTTTTACCACCGGAA+AGG + Chr8:62095303-62095322 None:intergenic 50.0%
! CCAAGAGTTAGGTCAGGTTG+AGG + Chr8:62096285-62096304 None:intergenic 50.0%
! CCCTCGAGTCTAGCTTCATT+CGG - Chr8:62095029-62095048 MsG0880045643.01.T01:CDS 50.0%
! CCTCGAGTCTAGCTTCATTC+GGG - Chr8:62095030-62095049 MsG0880045643.01.T01:CDS 50.0%
! GAAGCCACCCTTTTTACCAC+CGG + Chr8:62095308-62095327 None:intergenic 50.0%
! TAGGATGAAGACGCTGGCTA+AGG - Chr8:62097610-62097629 MsG0880045643.01.T01:CDS 50.0%
!! GCCATCAACATCGTCGATTC+CGG + Chr8:62095122-62095141 None:intergenic 50.0%
!!! AGGTCAGGTTGAGGGCATTT+TGG + Chr8:62096276-62096295 None:intergenic 50.0%
AGGTGGCCAAACAAGCCTGA+AGG - Chr8:62096099-62096118 MsG0880045643.01.T01:intron 55.0%
CCCGAATGAAGCTAGACTCG+AGG + Chr8:62095033-62095052 None:intergenic 55.0%
CTGAAACGACACACTGACCC+TGG - Chr8:62096306-62096325 MsG0880045643.01.T01:CDS 55.0%
GCCGGAATCGACGATGTTGA+TGG - Chr8:62095118-62095137 MsG0880045643.01.T01:CDS 55.0%
GGCCAAACAAGCCTGAAGGA+TGG - Chr8:62096103-62096122 MsG0880045643.01.T01:intron 55.0%
GTGGAGGCTTGTGAGAACTG+GGG - Chr8:62095169-62095188 MsG0880045643.01.T01:CDS 55.0%
TACCACCGGAGGAGAAGCTT+CGG - Chr8:62095272-62095291 MsG0880045643.01.T01:CDS 55.0%
! CTTCGGTTTGACCTTTCCGG+TGG - Chr8:62095289-62095308 MsG0880045643.01.T01:intron 55.0%
AACCGAAGCTTCTCCTCCGG+TGG + Chr8:62095277-62095296 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 62094986 62097703 62094986 ID=MsG0880045643.01;Name=MsG0880045643.01
Chr8 mRNA 62094986 62097703 62094986 ID=MsG0880045643.01.T01;Parent=MsG0880045643.01;Name=MsG0880045643.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|3|0|365
Chr8 exon 62097341 62097703 62097341 ID=MsG0880045643.01.T01:exon:23723;Parent=MsG0880045643.01.T01
Chr8 exon 62096234 62096662 62096234 ID=MsG0880045643.01.T01:exon:23722;Parent=MsG0880045643.01.T01
Chr8 exon 62094986 62095291 62094986 ID=MsG0880045643.01.T01:exon:23721;Parent=MsG0880045643.01.T01
Chr8 CDS 62097341 62097703 62097341 ID=MsG0880045643.01.T01:cds;Parent=MsG0880045643.01.T01
Chr8 CDS 62096234 62096662 62096234 ID=MsG0880045643.01.T01:cds;Parent=MsG0880045643.01.T01
Chr8 CDS 62094986 62095291 62094986 ID=MsG0880045643.01.T01:cds;Parent=MsG0880045643.01.T01
Gene Sequence

>MsG0880045643.01.T01

ATGGCACCAGTGAAAACTCTCAAATATCTAGCTCAAGAAAAGACCCTCGAGTCTAGCTTCATTCGGGATGAAAGTGAGCGTCCAAAAGTTGCATACAATCATTTCAGCAATGAGATTCCAATCATTTCTCTTGCCGGAATCGACGATGTTGATGGCCGTAGAATAGAGACTTGCAACAAGATTGTGGAGGCTTGTGAGAACTGGGGTATCTTCCAAATTGTTGATCATGGTGTAGATCAAAAGCTCATTGCTGAGATGACCCGTTTGGCTAAAGGGTTCTTTGATTTACCACCGGAGGAGAAGCTTCGGTTTGACCTTTCCGGTGGTAAAAAGGGTGGCTTCATAGTCTCTAGTCATCTTCAAGGAGAACCAGTGAAGGATTGGAGAGAGATGATGATATATTTTTCATACCCAATTAAACAAAGAGACTATTCAAGGTGGCCAAACAAGCCTGAAGGATGGAAAGAGGTGACCGAGCAATACAGTGAGAAGCTAATGAGTTTATCATGCAAGCTATTAGAAGTGTTATCTGAGGCTATGGGGTTAGAAAAAGATGCTCTAACAAAAGCATGTGTTGATATGGATCAGAAGCTTGTGATCAATAACTATCCAAAATGCCCTCAACCTGACCTAACTCTTGGACTGAAACGACACACTGACCCTGGCACCATTACTCTATTGCTTCAAGACCTAGTTGGTGGCCTTCAAGCTACCAGAGATAATGGTAAAACGTGGATTACTGTTAAGCCAATTGAAGGTGCTTTTGTTGTCAATATTGGAGATCATGGTCACTATCTAAGTAATGGACGGTTCAAAAATGCTGATCACCAAGCAGTGGTGAATTCCAACTACAGCCGTTTATCAATAGCAACATTCCAAAATCCAGCACCAGATGCAACTGTGTACCCTTTGAAGATTAGAGATGGAGAGAAATCTGTGATGGAAGAACCAATTACTTTTGCTGAAATGTATAGGAGGAAAATGAGCAAGGACCTTGAGATTGCTAGGATGAAGACGCTGGCTAAGGAAGAAAAAGAACTTAGGGACCTACAGAAGGCAAAACTTGAGCCCAAACCATTGAATGAGATTCTTGCTTAG

Protein sequence

>MsG0880045643.01.T01

MAPVKTLKYLAQEKTLESSFIRDESERPKVAYNHFSNEIPIISLAGIDDVDGRRIETCNKIVEACENWGIFQIVDHGVDQKLIAEMTRLAKGFFDLPPEEKLRFDLSGGKKGGFIVSSHLQGEPVKDWREMMIYFSYPIKQRDYSRWPNKPEGWKEVTEQYSEKLMSLSCKLLEVLSEAMGLEKDALTKACVDMDQKLVINNYPKCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDNGKTWITVKPIEGAFVVNIGDHGHYLSNGRFKNADHQAVVNSNYSRLSIATFQNPAPDATVYPLKIRDGEKSVMEEPITFAEMYRRKMSKDLEIARMKTLAKEEKELRDLQKAKLEPKPLNEILA*