AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009917.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009917.01.T01 MTR_2g072910 82.486 354 62 0 1 354 1 354 0.0 619
MsG0280009917.01.T01 MTR_2g072890 74.366 355 90 1 1 354 1 355 0.0 564
MsG0280009917.01.T01 MTR_2g072910 85.252 278 41 0 1 278 1 278 7.60e-178 494
MsG0280009917.01.T01 MTR_8g064200 60.116 346 137 1 9 354 10 354 4.79e-158 447
MsG0280009917.01.T01 MTR_8g064200 60.116 346 137 1 9 354 15 359 6.52e-158 447
MsG0280009917.01.T01 MTR_5g048470 58.074 353 146 2 3 354 4 355 1.71e-154 438
MsG0280009917.01.T01 MTR_5g048570 58.671 346 139 2 9 354 5 346 6.72e-153 434
MsG0280009917.01.T01 MTR_0009s0050 58.671 346 141 1 9 354 5 348 9.72e-152 431
MsG0280009917.01.T01 MTR_0009s0050 58.671 346 141 1 9 354 5 348 2.07e-151 431
MsG0280009917.01.T01 MTR_0328s0030 55.942 345 150 1 10 354 4 346 5.17e-150 427
MsG0280009917.01.T01 MTR_5g048740 57.803 346 143 2 10 354 4 347 1.30e-149 426
MsG0280009917.01.T01 MTR_5g055680 56.936 346 147 1 9 354 5 348 1.96e-148 423
MsG0280009917.01.T01 MTR_5g048850 56.936 346 147 1 9 354 5 348 2.00e-148 423
MsG0280009917.01.T01 MTR_5g048550 57.225 346 146 1 9 354 5 348 7.99e-148 421
MsG0280009917.01.T01 MTR_5g055820 57.061 347 146 2 9 354 5 349 5.43e-147 419
MsG0280009917.01.T01 MTR_5g055690 56.484 347 148 2 9 354 5 349 7.16e-146 416
MsG0280009917.01.T01 MTR_5g055900 54.913 346 154 1 9 354 5 348 3.98e-144 412
MsG0280009917.01.T01 MTR_0009s0480 53.602 347 158 2 9 354 3 347 6.73e-143 409
MsG0280009917.01.T01 MTR_5g055800 53.868 349 156 3 8 354 2 347 1.88e-140 402
MsG0280009917.01.T01 MTR_1g033810 51.163 344 162 2 10 352 10 348 1.22e-128 373
MsG0280009917.01.T01 MTR_5g048850 58.582 268 109 1 9 276 5 270 1.61e-117 342
MsG0280009917.01.T01 MTR_2g072930 95.349 172 6 1 1 172 1 170 1.66e-115 332
MsG0280009917.01.T01 MTR_5g055690 58.209 268 109 2 9 275 5 270 9.25e-115 334
MsG0280009917.01.T01 MTR_0009s0050 60.729 247 97 0 108 354 4 250 5.93e-113 329
MsG0280009917.01.T01 MTR_0009s0050 60.729 247 97 0 108 354 4 250 7.12e-113 329
MsG0280009917.01.T01 MTR_0056s0160 61.803 233 89 0 122 354 1 233 2.61e-112 327
MsG0280009917.01.T01 MTR_0009s0480 54.478 268 119 2 9 275 3 268 5.03e-111 325
MsG0280009917.01.T01 MTR_3g026150 44.669 347 187 3 10 354 17 360 2.47e-105 313
MsG0280009917.01.T01 MTR_2g437380 42.522 341 190 4 14 350 14 352 1.29e-99 299
MsG0280009917.01.T01 MTR_7g063730 40.580 345 202 3 11 354 23 365 1.83e-96 291
MsG0280009917.01.T01 MTR_7g062580 37.101 345 214 2 11 354 14 356 1.12e-93 284
MsG0280009917.01.T01 MTR_7g062570 39.710 345 205 3 11 354 14 356 3.61e-93 282
MsG0280009917.01.T01 MTR_7g062550 37.861 346 210 3 11 354 19 361 2.40e-89 273
MsG0280009917.01.T01 MTR_7g062600 37.752 347 210 4 11 354 10 353 4.73e-89 272
MsG0280009917.01.T01 MTR_3g026150 44.610 269 145 2 10 276 17 283 1.04e-80 248
MsG0280009917.01.T01 MTR_2g437380 43.798 258 144 1 94 350 1 258 1.17e-80 247
MsG0280009917.01.T01 MTR_5g082750 38.889 342 204 3 17 353 14 355 8.91e-80 248
MsG0280009917.01.T01 MTR_3g117420 37.101 345 207 4 16 354 14 354 1.86e-79 247
MsG0280009917.01.T01 MTR_3g026150 44.706 255 140 1 100 354 4 257 3.10e-79 243
MsG0280009917.01.T01 MTR_3g070860 38.012 342 207 3 17 353 15 356 1.44e-78 245
MsG0280009917.01.T01 MTR_7g068650 37.752 347 204 4 17 352 15 360 3.19e-78 244
MsG0280009917.01.T01 MTR_7g045650 40.690 290 166 4 1 288 10 295 8.46e-78 242
MsG0280009917.01.T01 MTR_4g015790 37.190 363 193 6 17 352 14 368 1.68e-76 240
MsG0280009917.01.T01 MTR_8g074050 37.101 345 207 4 16 354 14 354 1.23e-74 234
MsG0280009917.01.T01 MTR_8g074070 35.942 345 211 4 16 354 14 354 1.17e-73 232
MsG0280009917.01.T01 MTR_0009s0050 61.905 168 64 0 187 354 1 168 1.45e-73 226
MsG0280009917.01.T01 MTR_7g062560 33.724 341 213 5 15 354 25 353 2.05e-70 224
MsG0280009917.01.T01 MTR_4g116010 35.465 344 214 5 12 354 12 348 1.89e-68 219
MsG0280009917.01.T01 MTR_8g074070 34.783 345 196 5 16 354 14 335 4.59e-68 217
MsG0280009917.01.T01 MTR_0009s0400 62.500 144 54 0 211 354 1 144 4.94e-66 206
MsG0280009917.01.T01 MTR_3g092890 34.049 326 209 3 26 350 13 333 5.32e-66 212
MsG0280009917.01.T01 MTR_3g063180 35.362 345 210 7 17 352 10 350 1.19e-65 211
MsG0280009917.01.T01 MTR_8g024120 35.465 344 214 6 16 354 3 343 8.64e-64 206
MsG0280009917.01.T01 MTR_5g065010 35.511 352 202 10 16 354 3 342 1.08e-63 206
MsG0280009917.01.T01 MTR_3g117485 36.533 323 193 6 16 329 12 331 8.43e-61 199
MsG0280009917.01.T01 MTR_1g034140 33.841 328 195 7 25 337 1 321 1.18e-59 196
MsG0280009917.01.T01 MTR_3g072810 33.333 333 210 6 14 341 3 328 2.61e-58 192
MsG0280009917.01.T01 MTR_7g102820 32.615 325 203 5 43 354 59 380 3.33e-57 191
MsG0280009917.01.T01 MTR_1g062110 31.909 351 224 7 16 354 26 373 3.89e-57 190
MsG0280009917.01.T01 MTR_1g034060 34.395 314 178 8 47 335 19 329 1.88e-56 187
MsG0280009917.01.T01 MTR_5g059130 30.699 329 218 6 12 335 4 327 1.95e-56 187
MsG0280009917.01.T01 MTR_1g034120 34.076 314 179 8 47 335 19 329 1.96e-56 187
MsG0280009917.01.T01 MTR_5g011250 33.140 344 206 8 17 342 8 345 8.70e-56 186
MsG0280009917.01.T01 MTR_3g072820 31.193 327 207 7 17 334 7 324 2.34e-53 179
MsG0280009917.01.T01 MTR_5g059140 30.503 318 208 6 14 323 3 315 4.48e-53 178
MsG0280009917.01.T01 MTR_2g102570 33.115 305 188 6 38 335 39 334 1.30e-52 178
MsG0280009917.01.T01 MTR_2g025120 32.776 299 189 6 52 346 5 295 1.58e-52 176
MsG0280009917.01.T01 MTR_8g033380 33.654 312 188 6 24 323 29 333 1.61e-52 178
MsG0280009917.01.T01 MTR_3g091360 33.234 337 211 7 24 353 24 353 1.68e-52 177
MsG0280009917.01.T01 MTR_2g069300 31.034 319 207 7 43 354 46 358 3.70e-52 177
MsG0280009917.01.T01 MTR_3g091350 31.609 348 223 8 14 353 20 360 7.39e-52 176
MsG0280009917.01.T01 MTR_3g117485 36.078 255 159 3 78 329 6 259 8.80e-52 173
MsG0280009917.01.T01 MTR_4g093840 33.333 354 212 12 16 354 22 366 1.04e-51 176
MsG0280009917.01.T01 MTR_4g087140 33.007 306 181 8 51 335 26 328 1.52e-51 175
MsG0280009917.01.T01 MTR_4g087110 33.033 333 197 8 34 346 12 338 1.56e-51 175
MsG0280009917.01.T01 MTR_1g048940 31.686 344 216 8 21 354 16 350 2.70e-51 174
MsG0280009917.01.T01 MTR_3g088565 34.307 274 167 4 49 317 1 266 3.45e-51 172
MsG0280009917.01.T01 MTR_0009s0410 49.375 160 78 2 8 166 2 159 3.58e-51 168
MsG0280009917.01.T01 MTR_7g105070 29.023 348 230 7 16 354 23 362 8.98e-51 173
MsG0280009917.01.T01 MTR_4g087090 31.889 323 193 8 51 354 30 344 2.96e-50 171
MsG0280009917.01.T01 MTR_2g069190 31.875 320 202 6 43 354 60 371 3.37e-50 172
MsG0280009917.01.T01 MTR_3g088745 31.975 319 182 7 29 334 23 319 4.60e-50 171
MsG0280009917.01.T01 MTR_7g081710 27.378 347 236 6 16 354 13 351 5.85e-50 171
MsG0280009917.01.T01 MTR_4g087120 33.882 304 175 8 47 327 19 319 5.98e-50 171
MsG0280009917.01.T01 MTR_5g032870 31.118 331 219 7 19 342 5 333 6.91e-50 171
MsG0280009917.01.T01 MTR_8g028435 28.818 347 230 9 16 354 27 364 1.06e-49 171
MsG0280009917.01.T01 MTR_8g041620 31.054 351 222 9 16 354 32 374 1.93e-49 170
MsG0280009917.01.T01 MTR_8g009090 29.191 346 230 10 16 354 27 364 2.12e-49 169
MsG0280009917.01.T01 MTR_8g009110 29.598 348 227 11 16 354 27 365 8.23e-49 168
MsG0280009917.01.T01 MTR_2g068950 29.261 352 228 8 16 354 26 369 1.49e-48 167
MsG0280009917.01.T01 MTR_2g069090 30.915 317 210 4 43 354 60 372 1.87e-48 167
MsG0280009917.01.T01 MTR_3g096500 33.010 309 195 6 27 326 44 349 2.82e-48 167
MsG0280009917.01.T01 MTR_6g464620 32.353 306 195 6 27 323 42 344 3.86e-48 167
MsG0280009917.01.T01 MTR_3g083370 31.633 294 188 8 51 341 4 287 4.62e-48 165
MsG0280009917.01.T01 MTR_5g085330 32.131 305 193 6 48 346 2 298 4.72e-48 165
MsG0280009917.01.T01 MTR_1g102070 33.226 310 187 7 27 323 37 339 6.01e-48 166
MsG0280009917.01.T01 MTR_4g087100 33.025 324 191 7 47 347 19 339 7.21e-48 165
MsG0280009917.01.T01 MTR_8g008930 30.172 348 225 11 16 354 27 365 1.74e-47 164
MsG0280009917.01.T01 MTR_8g009160 28.530 347 231 9 16 354 27 364 1.81e-47 164
MsG0280009917.01.T01 MTR_2g069010 29.261 352 228 8 16 354 32 375 3.37e-47 164
MsG0280009917.01.T01 MTR_2g068960 29.545 352 227 8 16 354 26 369 3.56e-47 164
MsG0280009917.01.T01 MTR_1g093120 29.940 334 214 8 29 354 49 370 1.18e-46 162
MsG0280009917.01.T01 MTR_8g075890 31.650 297 197 4 20 313 10 303 1.29e-46 162
MsG0280009917.01.T01 MTR_8g041600 30.199 351 225 9 16 354 32 374 1.74e-46 162
MsG0280009917.01.T01 MTR_1g093140 29.003 331 217 7 34 354 56 378 3.08e-46 162
MsG0280009917.01.T01 MTR_2g069210 29.653 317 213 5 43 354 56 367 4.03e-46 161
MsG0280009917.01.T01 MTR_8g009170 28.940 349 229 10 16 354 27 366 4.33e-46 161
MsG0280009917.01.T01 MTR_8g009080 30.000 290 194 4 69 354 113 397 6.67e-46 161
MsG0280009917.01.T01 MTR_1g093110 28.349 321 213 8 43 354 62 374 7.41e-46 160
MsG0280009917.01.T01 MTR_1g070135 33.221 298 189 7 51 344 38 329 7.48e-46 160
MsG0280009917.01.T01 MTR_5g032880 31.013 316 212 5 32 342 357 671 7.73e-46 166
MsG0280009917.01.T01 MTR_5g032880 30.573 314 206 5 32 341 19 324 1.29e-45 166
MsG0280009917.01.T01 MTR_8g075830 31.353 303 202 4 14 313 4 303 1.15e-45 160
MsG0280009917.01.T01 MTR_1g011580 31.987 297 187 7 51 345 63 346 1.46e-45 159
MsG0280009917.01.T01 MTR_7g056347 27.794 349 235 8 16 354 32 373 1.89e-45 159
MsG0280009917.01.T01 MTR_4g024660 28.125 352 230 9 16 354 32 373 3.03e-45 159
MsG0280009917.01.T01 MTR_8g062600 27.901 362 218 11 16 354 32 373 3.62e-45 159
MsG0280009917.01.T01 MTR_3g058610 32.432 296 188 6 50 338 38 328 5.34e-45 158
MsG0280009917.01.T01 MTR_1g081840 31.420 331 186 9 23 334 28 336 8.76e-45 158
MsG0280009917.01.T01 MTR_4g115990 30.492 305 188 5 45 348 40 321 1.02e-44 156
MsG0280009917.01.T01 MTR_2g069020 31.014 345 207 11 16 343 30 360 1.47e-44 157
MsG0280009917.01.T01 MTR_2g083030 32.423 293 172 9 50 334 36 310 2.34e-44 155
MsG0280009917.01.T01 MTR_7g016090 29.552 335 217 6 26 354 16 337 2.34e-44 155
MsG0280009917.01.T01 MTR_7g016090 29.552 335 217 6 26 354 14 335 2.54e-44 155
MsG0280009917.01.T01 MTR_2g069020 30.286 350 224 9 16 354 30 370 2.68e-44 157
MsG0280009917.01.T01 MTR_5g005570 30.820 305 183 8 37 334 26 309 3.41e-44 155
MsG0280009917.01.T01 MTR_2g083000 31.959 291 175 8 50 334 32 305 1.80e-43 153
MsG0280009917.01.T01 MTR_3g043900 29.191 346 229 8 16 354 17 353 2.07e-43 154
MsG0280009917.01.T01 MTR_4g117880 28.367 349 231 11 16 354 27 366 4.28e-43 153
MsG0280009917.01.T01 MTR_2g069060 28.527 319 213 10 42 354 40 349 6.66e-43 152
MsG0280009917.01.T01 MTR_5g022020 30.712 267 181 3 50 313 38 303 2.86e-42 150
MsG0280009917.01.T01 MTR_3g045230 28.818 347 230 9 16 354 17 354 4.11e-42 150
MsG0280009917.01.T01 MTR_4g087130 34.797 296 171 7 51 327 26 318 4.36e-42 150
MsG0280009917.01.T01 MTR_0032s0040 31.731 312 191 8 49 349 68 368 4.43e-42 150
MsG0280009917.01.T01 MTR_1g032140 30.347 346 217 12 16 350 29 361 5.39e-42 150
MsG0280009917.01.T01 MTR_1g070080 30.091 329 213 8 24 344 10 329 9.06e-42 149
MsG0280009917.01.T01 MTR_7g451860 30.717 293 181 7 49 334 39 316 9.30e-42 149
MsG0280009917.01.T01 MTR_7g047670 30.717 293 181 7 49 334 39 316 9.30e-42 149
MsG0280009917.01.T01 MTR_1g070085 28.955 335 213 9 22 344 8 329 1.06e-41 149
MsG0280009917.01.T01 MTR_1g070085 28.955 335 213 9 22 344 8 329 1.06e-41 149
MsG0280009917.01.T01 MTR_6g015950 31.056 322 207 8 26 341 14 326 1.13e-41 149
MsG0280009917.01.T01 MTR_1g070120 30.606 330 209 9 24 344 11 329 1.36e-41 149
MsG0280009917.01.T01 MTR_7g102720 29.483 329 219 6 30 354 16 335 1.97e-41 148
MsG0280009917.01.T01 MTR_7g029655 30.671 313 199 8 51 354 67 370 1.99e-41 149
MsG0280009917.01.T01 MTR_8g063070 25.656 343 240 7 16 349 32 368 2.14e-41 149
MsG0280009917.01.T01 MTR_8g093930 28.354 328 203 8 26 335 24 337 5.95e-41 147
MsG0280009917.01.T01 MTR_2g068840 29.494 356 219 11 16 354 21 361 9.03e-41 147
MsG0280009917.01.T01 MTR_8g093980 31.105 344 203 11 23 347 33 361 1.40e-40 147
MsG0280009917.01.T01 MTR_1g062110 31.757 296 186 8 16 298 26 318 6.74e-40 143
MsG0280009917.01.T01 MTR_1g043760 27.941 340 228 7 16 347 19 349 1.36e-39 144
MsG0280009917.01.T01 MTR_1g043810 27.246 345 239 7 16 354 19 357 7.03e-39 142
MsG0280009917.01.T01 MTR_8g469400 26.629 353 221 9 16 354 32 360 1.09e-38 141
MsG0280009917.01.T01 MTR_1g070185 28.895 353 219 11 16 354 33 367 6.66e-38 139
MsG0280009917.01.T01 MTR_8g006930 27.429 350 235 8 16 354 32 373 6.76e-38 139
MsG0280009917.01.T01 MTR_4g119410 26.571 350 238 8 16 354 32 373 8.84e-38 139
MsG0280009917.01.T01 MTR_7g016080 27.083 336 218 9 26 354 14 329 2.63e-37 137
MsG0280009917.01.T01 MTR_1g070085 35.938 192 116 3 156 344 64 251 3.28e-37 135
MsG0280009917.01.T01 MTR_1g043775 26.389 360 250 8 1 354 7 357 4.43e-37 137
MsG0280009917.01.T01 MTR_4g074130 28.889 315 181 10 49 336 38 336 1.22e-36 135
MsG0280009917.01.T01 MTR_6g092620 30.216 278 175 7 49 318 1 267 2.05e-36 134
MsG0280009917.01.T01 MTR_1g070100 35.938 192 116 3 156 344 60 247 4.84e-36 132
MsG0280009917.01.T01 MTR_7g056393 26.857 350 237 8 16 354 32 373 6.11e-36 134
MsG0280009917.01.T01 MTR_1g032250 28.297 364 207 10 16 353 36 371 7.52e-36 134
MsG0280009917.01.T01 MTR_3g464530 32.353 272 156 8 44 302 23 279 1.79e-35 132
MsG0280009917.01.T01 MTR_8g009120 28.616 318 199 9 46 354 55 353 2.41e-35 132
MsG0280009917.01.T01 MTR_1g032220 27.874 348 229 9 16 353 36 371 5.96e-35 131
MsG0280009917.01.T01 MTR_2g019370 28.014 282 186 8 75 343 45 322 6.80e-35 130
MsG0280009917.01.T01 MTR_4g123020 29.412 306 188 9 51 343 20 310 7.55e-35 130
MsG0280009917.01.T01 MTR_1g043770 29.329 283 192 4 75 354 78 355 8.91e-35 130
MsG0280009917.01.T01 MTR_2g025120 31.718 227 144 5 52 275 5 223 1.18e-34 127
MsG0280009917.01.T01 MTR_8g009150 26.198 313 195 8 51 354 60 345 1.31e-34 130
MsG0280009917.01.T01 MTR_1g086550 30.982 326 190 13 51 354 20 332 5.54e-34 128
MsG0280009917.01.T01 MTR_2g033270 30.864 324 200 11 40 350 1 313 6.85e-34 127
MsG0280009917.01.T01 MTR_8g461330 27.273 308 199 9 50 343 26 322 1.57e-33 127
MsG0280009917.01.T01 MTR_7g078010 25.140 358 233 9 16 354 32 373 3.21e-33 127
MsG0280009917.01.T01 MTR_2g068800 27.875 287 172 10 16 293 21 281 8.69e-33 124
MsG0280009917.01.T01 MTR_2g070870 27.243 301 197 10 51 343 28 314 1.17e-32 124
MsG0280009917.01.T01 MTR_2g069060 28.980 245 165 7 34 275 10 248 2.52e-31 119
MsG0280009917.01.T01 MTR_8g041600 30.224 268 171 8 16 275 32 291 5.78e-31 119
MsG0280009917.01.T01 MTR_4g132770 42.478 113 65 0 208 320 26 138 6.64e-31 115
MsG0280009917.01.T01 MTR_7g056353 27.174 276 184 6 87 353 79 346 3.94e-30 120
MsG0280009917.01.T01 MTR_1g070135 33.624 229 142 7 51 275 38 260 4.39e-30 116
MsG0280009917.01.T01 MTR_8g009180 32.778 180 115 4 174 349 112 289 7.50e-30 116
MsG0280009917.01.T01 MTR_3g083370 28.947 228 151 6 51 275 4 223 8.52e-30 114
MsG0280009917.01.T01 MTR_8g009170 28.674 279 182 9 16 286 27 296 1.05e-29 115
MsG0280009917.01.T01 MTR_4g096840 27.046 281 189 9 75 343 46 322 1.89e-29 116
MsG0280009917.01.T01 MTR_3g464530 32.245 245 138 8 44 275 23 252 1.28e-28 112
MsG0280009917.01.T01 MTR_3g040410 28.276 290 194 9 51 334 6 287 1.38e-28 113
MsG0280009917.01.T01 MTR_8g009080 30.622 209 135 6 69 274 113 314 1.15e-27 111
MsG0280009917.01.T01 MTR_1g070110 34.715 193 93 4 149 339 58 219 1.82e-27 108
MsG0280009917.01.T01 MTR_8g030880 26.667 300 195 11 49 336 8 294 6.46e-27 108
MsG0280009917.01.T01 MTR_5g025090 26.885 305 210 4 51 354 5 297 1.01e-26 107
MsG0280009917.01.T01 MTR_8g009080 29.756 205 136 4 69 271 113 311 1.56e-26 108
MsG0280009917.01.T01 MTR_1g027290 26.791 321 209 9 50 354 28 338 4.72e-26 107
MsG0280009917.01.T01 MTR_7g090520 28.521 284 189 8 51 327 10 286 1.13e-24 102
MsG0280009917.01.T01 MTR_1g043810 27.099 262 182 6 16 274 19 274 3.21e-24 101
MsG0280009917.01.T01 MTR_5g027230 25.965 285 198 4 51 334 6 278 4.42e-24 100
MsG0280009917.01.T01 MTR_4g100600 28.527 319 201 10 45 346 3 311 4.47e-24 101
MsG0280009917.01.T01 MTR_1g027310 26.036 338 199 8 27 354 20 316 5.53e-24 100
MsG0280009917.01.T01 MTR_8g102600 28.571 294 176 12 72 339 29 314 7.79e-24 100
MsG0280009917.01.T01 MTR_6g088665 27.797 295 179 12 72 339 38 325 1.06e-23 100
MsG0280009917.01.T01 MTR_6g088665 27.703 296 179 12 72 339 38 326 1.66e-23 99.8
MsG0280009917.01.T01 MTR_7g077670 25.868 317 191 10 41 336 1 294 6.58e-23 97.8
MsG0280009917.01.T01 MTR_1g043770 30.542 203 134 3 75 276 78 274 7.41e-23 97.4
MsG0280009917.01.T01 MTR_1g043775 25.993 277 193 7 1 274 7 274 2.60e-22 95.9
MsG0280009917.01.T01 MTR_3g108520 25.868 317 206 11 46 344 2 307 1.32e-21 94.4
MsG0280009917.01.T01 MTR_5g025050 25.614 285 199 5 51 334 5 277 2.90e-21 92.8
MsG0280009917.01.T01 MTR_7g078010 24.908 273 176 8 16 275 32 288 3.57e-21 92.8
MsG0280009917.01.T01 MTR_1g043840 31.579 171 109 3 172 335 55 224 4.32e-21 93.2
MsG0280009917.01.T01 MTR_5g024940 24.920 313 187 8 51 354 6 279 2.24e-19 87.4
MsG0280009917.01.T01 MTR_4g021380 26.144 306 208 13 50 342 6 306 2.30e-19 87.8
MsG0280009917.01.T01 MTR_4g011720 26.846 298 208 8 50 342 8 300 3.39e-19 87.4
MsG0280009917.01.T01 MTR_4g100590 26.349 315 194 11 45 339 3 299 1.00e-18 85.9
MsG0280009917.01.T01 MTR_1g032240 36.301 146 65 5 209 353 59 177 5.05e-18 81.3
MsG0280009917.01.T01 MTR_4g021360 23.432 303 205 10 49 335 5 296 5.77e-18 84.0
MsG0280009917.01.T01 MTR_8g102600 27.206 272 164 12 94 339 1 264 4.72e-16 77.8
MsG0280009917.01.T01 MTR_4g011690 26.578 301 206 10 50 342 8 301 4.76e-16 78.2
MsG0280009917.01.T01 MTR_6g035160 31.496 127 84 3 211 335 35 160 1.62e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009917.01.T01 AT1G17020 60.335 358 138 3 1 354 1 358 6.15e-162 457
MsG0280009917.01.T01 AT1G17010 56.425 358 152 3 1 354 1 358 5.91e-149 424
MsG0280009917.01.T01 AT4G25300 54.930 355 157 3 3 354 2 356 2.43e-143 410
MsG0280009917.01.T01 AT4G25310 54.902 357 151 5 3 354 2 353 8.67e-137 393
MsG0280009917.01.T01 AT1G78550 51.685 356 170 2 1 354 1 356 2.07e-133 385
MsG0280009917.01.T01 AT4G25310 49.438 356 144 5 3 354 2 325 2.94e-113 332
MsG0280009917.01.T01 AT1G78550 52.669 281 129 1 74 354 2 278 4.71e-109 320
MsG0280009917.01.T01 AT3G21420 41.547 349 196 4 14 354 14 362 9.62e-96 289
MsG0280009917.01.T01 AT2G38240 40.058 342 197 3 16 352 11 349 7.04e-88 269
MsG0280009917.01.T01 AT5G05600 37.758 339 206 3 17 350 27 365 5.42e-80 249
MsG0280009917.01.T01 AT5G20400 36.607 336 205 5 16 346 8 340 1.22e-77 242
MsG0280009917.01.T01 AT1G49390 37.304 319 194 4 16 329 8 325 1.34e-76 239
MsG0280009917.01.T01 AT3G11180 36.695 357 211 6 3 348 38 390 3.17e-74 235
MsG0280009917.01.T01 AT3G11180 36.490 359 215 5 3 350 38 394 4.69e-74 235
MsG0280009917.01.T01 AT3G55970 35.447 347 214 4 17 353 14 360 4.94e-73 231
MsG0280009917.01.T01 AT5G54000 38.000 300 182 3 49 346 44 341 1.85e-72 229
MsG0280009917.01.T01 AT4G25300 53.158 190 88 1 166 354 73 262 1.11e-71 224
MsG0280009917.01.T01 AT5G20550 36.923 325 188 7 16 329 8 326 2.79e-71 226
MsG0280009917.01.T01 AT1G49390 39.024 246 149 1 85 329 1 246 4.59e-66 210
MsG0280009917.01.T01 AT5G54000 37.262 263 162 2 85 346 1 261 1.52e-63 203
MsG0280009917.01.T01 AT5G24530 32.628 331 214 4 26 352 13 338 6.36e-63 204
MsG0280009917.01.T01 AT4G10500 34.036 332 207 7 28 353 20 345 1.89e-62 203
MsG0280009917.01.T01 AT5G05600 39.394 264 155 3 17 275 27 290 6.34e-62 200
MsG0280009917.01.T01 AT4G10490 32.011 353 223 8 8 353 2 344 6.21e-60 197
MsG0280009917.01.T01 AT4G16330 32.288 319 200 6 39 352 55 362 1.95e-56 188
MsG0280009917.01.T01 AT3G19010 34.007 297 178 5 46 327 23 316 3.64e-56 187
MsG0280009917.01.T01 AT3G19010 34.007 297 178 5 46 327 23 316 3.64e-56 187
MsG0280009917.01.T01 AT2G36690 31.624 351 221 8 16 354 20 363 1.92e-55 186
MsG0280009917.01.T01 AT2G36690 31.624 351 221 8 16 354 20 363 1.92e-55 186
MsG0280009917.01.T01 AT3G19000 34.641 306 173 8 50 335 31 329 2.26e-55 185
MsG0280009917.01.T01 AT3G13610 32.102 352 210 11 16 354 26 361 6.13e-55 184
MsG0280009917.01.T01 AT4G22880 33.232 328 202 7 14 326 4 329 3.86e-54 182
MsG0280009917.01.T01 AT4G22880 33.232 328 202 7 14 326 4 329 3.86e-54 182
MsG0280009917.01.T01 AT4G22880 33.232 328 202 7 14 326 4 329 3.86e-54 182
MsG0280009917.01.T01 AT3G55970 36.059 269 162 4 17 275 14 282 4.77e-53 177
MsG0280009917.01.T01 AT1G55290 33.621 348 203 12 16 350 25 357 6.44e-53 179
MsG0280009917.01.T01 AT3G60290 31.944 360 231 7 1 353 1 353 7.29e-53 179
MsG0280009917.01.T01 AT4G25420 33.227 313 190 5 26 326 38 343 2.84e-52 177
MsG0280009917.01.T01 AT1G77330 32.886 298 177 6 49 335 1 286 5.80e-52 175
MsG0280009917.01.T01 AT5G59540 32.479 351 215 11 17 354 25 366 2.31e-51 175
MsG0280009917.01.T01 AT5G43440 30.086 349 228 7 16 354 23 365 3.45e-51 174
MsG0280009917.01.T01 AT5G59530 32.857 350 214 12 17 354 24 364 3.08e-50 172
MsG0280009917.01.T01 AT5G43450 30.659 349 221 9 17 354 24 362 1.07e-49 170
MsG0280009917.01.T01 AT1G44090 33.225 307 193 6 27 325 42 344 5.90e-49 169
MsG0280009917.01.T01 AT1G12010 32.130 277 177 4 49 322 5 273 5.97e-49 167
MsG0280009917.01.T01 AT3G19010 32.997 297 151 6 46 327 23 286 1.10e-48 166
MsG0280009917.01.T01 AT5G07480 33.022 321 188 10 51 354 44 354 1.16e-48 167
MsG0280009917.01.T01 AT2G30830 31.304 345 225 7 16 354 20 358 5.21e-48 166
MsG0280009917.01.T01 AT5G08640 31.707 328 212 6 14 334 3 325 6.76e-48 165
MsG0280009917.01.T01 AT5G08640 31.707 328 212 6 14 334 3 325 6.76e-48 165
MsG0280009917.01.T01 AT4G16330 34.387 253 157 4 104 352 9 256 9.49e-48 162
MsG0280009917.01.T01 AT1G15550 30.094 319 204 6 28 336 30 339 1.66e-47 164
MsG0280009917.01.T01 AT5G07200 34.520 281 173 5 49 319 56 335 1.85e-47 165
MsG0280009917.01.T01 AT1G62380 30.576 278 180 6 49 322 5 273 4.56e-47 162
MsG0280009917.01.T01 AT1G05010 32.566 304 189 7 51 346 4 299 5.30e-47 162
MsG0280009917.01.T01 AT2G44800 29.825 342 233 5 16 353 15 353 5.76e-47 163
MsG0280009917.01.T01 AT1G06620 32.177 317 201 7 45 354 56 365 1.25e-46 162
MsG0280009917.01.T01 AT1G06650 32.492 317 190 9 51 354 64 369 4.37e-46 161
MsG0280009917.01.T01 AT1G04380 30.745 322 210 7 38 354 32 345 1.76e-45 159
MsG0280009917.01.T01 AT5G51810 32.000 300 191 5 26 318 40 333 4.32e-45 159
MsG0280009917.01.T01 AT1G04350 31.132 318 194 11 49 354 56 360 8.44e-45 157
MsG0280009917.01.T01 AT1G80340 30.218 321 197 6 27 335 26 331 1.18e-44 157
MsG0280009917.01.T01 AT3G12900 29.070 344 229 9 16 353 21 355 1.19e-44 157
MsG0280009917.01.T01 AT3G51240 32.210 267 177 3 50 313 37 302 1.32e-44 157
MsG0280009917.01.T01 AT1G60980 32.012 328 203 7 28 338 36 360 1.35e-44 157
MsG0280009917.01.T01 AT2G30840 29.494 356 221 11 16 354 20 362 2.80e-44 156
MsG0280009917.01.T01 AT1G06640 31.399 293 175 9 75 354 90 369 9.15e-44 155
MsG0280009917.01.T01 AT4G21200 33.955 268 157 7 49 309 40 294 1.05e-43 154
MsG0280009917.01.T01 AT1G78440 31.715 309 180 11 51 343 18 311 4.39e-42 149
MsG0280009917.01.T01 AT5G12270 29.412 340 220 10 25 354 30 359 7.70e-42 150
MsG0280009917.01.T01 AT3G19000 33.740 246 136 8 50 275 31 269 1.74e-41 146
MsG0280009917.01.T01 AT5G63590 33.444 302 189 8 39 334 2 297 1.89e-41 147
MsG0280009917.01.T01 AT2G30840 28.933 356 217 12 16 354 20 356 8.06e-41 147
MsG0280009917.01.T01 AT3G19010 32.787 244 146 5 50 278 27 267 1.14e-40 145
MsG0280009917.01.T01 AT2G19590 33.577 274 168 7 49 318 9 272 2.55e-40 144
MsG0280009917.01.T01 AT1G03400 29.801 302 195 6 49 345 54 343 2.87e-40 145
MsG0280009917.01.T01 AT1G06645 29.014 355 223 11 16 354 38 379 1.01e-39 144
MsG0280009917.01.T01 AT4G25420 32.443 262 158 5 26 275 38 292 2.72e-39 141
MsG0280009917.01.T01 AT1G03410 29.393 313 208 7 49 354 55 361 2.95e-39 143
MsG0280009917.01.T01 AT1G80330 29.965 287 180 6 75 345 66 347 3.10e-39 142
MsG0280009917.01.T01 AT1G03410 29.393 313 208 7 49 354 92 398 5.61e-39 143
MsG0280009917.01.T01 AT1G50960 31.164 292 184 6 47 334 36 314 9.98e-38 138
MsG0280009917.01.T01 AT3G49620 32.907 313 182 9 51 337 34 344 3.73e-37 137
MsG0280009917.01.T01 AT4G21690 29.431 299 185 8 51 335 47 333 3.78e-37 137
MsG0280009917.01.T01 AT5G07480 35.814 215 125 6 149 354 35 245 5.78e-37 134
MsG0280009917.01.T01 AT3G61400 31.788 302 179 12 67 354 82 370 6.71e-36 134
MsG0280009917.01.T01 AT3G49630 31.090 312 185 10 51 335 9 317 2.67e-35 132
MsG0280009917.01.T01 AT1G03400 27.576 330 194 7 49 345 54 371 6.73e-35 132
MsG0280009917.01.T01 AT2G25450 29.830 352 222 12 16 354 20 359 7.70e-35 131
MsG0280009917.01.T01 AT5G51810 31.923 260 164 5 26 278 40 293 8.14e-35 129
MsG0280009917.01.T01 AT3G49630 31.579 285 174 8 69 335 32 313 2.30e-34 129
MsG0280009917.01.T01 AT1G30040 28.417 278 186 9 75 343 48 321 5.26e-34 128
MsG0280009917.01.T01 AT1G47990 29.538 325 187 12 50 353 14 317 9.89e-34 127
MsG0280009917.01.T01 AT3G51240 32.093 215 143 2 101 313 5 218 1.64e-33 125
MsG0280009917.01.T01 AT2G34555 30.033 303 189 11 51 343 27 316 2.81e-33 126
MsG0280009917.01.T01 AT3G50210 28.704 324 203 9 45 343 2 322 3.06e-33 126
MsG0280009917.01.T01 AT3G50210 28.704 324 203 9 45 343 2 322 3.06e-33 126
MsG0280009917.01.T01 AT3G50210 28.704 324 203 9 45 343 2 322 3.06e-33 126
MsG0280009917.01.T01 AT5G63600 27.304 293 202 5 45 335 27 310 5.54e-33 125
MsG0280009917.01.T01 AT5G43440 28.464 267 178 6 16 275 23 283 2.70e-32 122
MsG0280009917.01.T01 AT5G63600 27.551 294 201 6 45 335 27 311 3.00e-32 123
MsG0280009917.01.T01 AT2G19590 31.950 241 151 6 82 318 26 257 5.76e-32 122
MsG0280009917.01.T01 AT5G43450 29.455 275 160 9 16 274 23 279 5.17e-31 119
MsG0280009917.01.T01 AT1G06620 32.766 235 147 6 45 275 56 283 1.06e-30 118
MsG0280009917.01.T01 AT1G02400 29.316 307 193 12 51 344 24 319 1.43e-30 119
MsG0280009917.01.T01 AT5G59540 31.111 270 167 9 16 275 24 284 3.98e-30 117
MsG0280009917.01.T01 AT2G30840 29.304 273 166 9 16 274 20 279 4.87e-30 117
MsG0280009917.01.T01 AT1G06640 33.333 216 122 7 75 281 90 292 1.05e-29 116
MsG0280009917.01.T01 AT4G23340 30.293 307 188 10 42 336 1 293 1.27e-29 116
MsG0280009917.01.T01 AT1G06640 33.333 210 118 7 75 275 90 286 2.17e-29 115
MsG0280009917.01.T01 AT5G43935 31.321 265 158 9 75 335 39 283 6.24e-29 114
MsG0280009917.01.T01 AT1G06650 32.083 240 141 8 51 280 64 291 1.54e-28 113
MsG0280009917.01.T01 AT5G63595 31.128 257 152 7 43 298 17 249 3.13e-28 111
MsG0280009917.01.T01 AT1G04380 30.364 247 148 8 38 275 32 263 5.43e-28 110
MsG0280009917.01.T01 AT3G46500 29.126 309 197 11 50 339 8 313 1.79e-27 110
MsG0280009917.01.T01 AT3G47190 28.261 276 156 9 49 302 30 285 6.48e-27 109
MsG0280009917.01.T01 AT3G61400 32.420 219 126 8 67 275 82 288 1.77e-23 99.0
MsG0280009917.01.T01 AT3G46500 29.630 270 168 11 50 300 8 274 5.40e-23 97.8
MsG0280009917.01.T01 AT3G49630 34.392 189 113 6 155 335 59 244 9.02e-23 96.3
MsG0280009917.01.T01 AT1G30040 29.524 210 135 9 75 275 48 253 1.50e-22 95.9
MsG0280009917.01.T01 AT5G63580 29.596 223 150 4 51 271 19 236 4.49e-22 94.0
MsG0280009917.01.T01 AT5G63580 29.596 223 150 4 51 271 19 236 6.22e-22 94.0
MsG0280009917.01.T01 AT3G50210 31.250 192 123 5 158 343 52 240 1.78e-20 89.7
MsG0280009917.01.T01 AT1G14130 25.397 315 210 11 42 348 1 298 2.16e-20 90.5
MsG0280009917.01.T01 AT5G58660 24.150 294 186 10 49 315 32 315 3.24e-20 90.9
MsG0280009917.01.T01 AT1G35190 28.049 328 190 12 44 339 2 315 2.07e-19 88.2
MsG0280009917.01.T01 AT3G46490 25.714 315 207 9 50 339 8 320 6.85e-19 86.7
MsG0280009917.01.T01 AT1G02400 30.085 236 146 9 52 277 25 251 9.40e-19 85.1
MsG0280009917.01.T01 AT1G52820 25.902 305 192 9 49 336 10 297 4.12e-18 84.3
MsG0280009917.01.T01 AT1G35190 26.045 311 195 12 44 339 2 292 8.71e-18 83.2
MsG0280009917.01.T01 AT3G46490 26.950 282 179 9 50 306 8 287 1.84e-17 82.4
MsG0280009917.01.T01 AT4G23340 30.636 173 111 5 172 336 4 175 2.04e-17 80.1
MsG0280009917.01.T01 AT4G22870 42.857 84 47 1 244 326 2 85 1.21e-16 75.5
MsG0280009917.01.T01 AT4G16765 32.086 187 108 6 166 339 60 240 3.77e-16 77.4
MsG0280009917.01.T01 AT4G16765 32.086 187 108 6 166 339 60 240 3.77e-16 77.4
MsG0280009917.01.T01 AT4G16765 32.086 187 108 6 166 339 60 240 3.77e-16 77.4
MsG0280009917.01.T01 AT3G46500 31.667 180 113 5 168 339 62 239 4.37e-16 77.4
MsG0280009917.01.T01 AT3G46500 31.667 180 113 5 168 339 62 239 4.37e-16 77.4
MsG0280009917.01.T01 AT2G06960 35.461 141 76 5 202 342 21 146 7.75e-16 74.3
MsG0280009917.01.T01 AT3G46500 31.461 178 112 5 170 339 2 177 8.04e-16 75.5
MsG0280009917.01.T01 AT4G03070 25.733 307 193 10 49 336 12 302 1.72e-15 76.6
MsG0280009917.01.T01 AT1G14120 25.260 289 199 7 44 329 3 277 5.72e-15 75.1
MsG0280009917.01.T01 AT1G14120 25.260 289 199 7 44 329 3 277 5.72e-15 75.1
MsG0280009917.01.T01 AT1G14120 25.260 289 199 7 44 329 3 277 5.72e-15 75.1
MsG0280009917.01.T01 AT4G16765 37.500 120 68 3 225 339 77 194 7.38e-15 72.8
MsG0280009917.01.T01 AT4G16765 32.184 174 99 6 166 326 60 227 2.93e-14 72.0
MsG0280009917.01.T01 AT4G22870 42.105 76 43 1 252 326 51 126 5.28e-14 69.3
MsG0280009917.01.T01 AT1G52800 25.097 259 183 7 50 302 9 262 1.28e-13 71.2
MsG0280009917.01.T01 AT3G46480 27.519 258 153 11 100 341 36 275 5.23e-13 68.9
MsG0280009917.01.T01 AT3G46500 33.333 141 84 5 168 300 31 169 5.15e-12 64.7
MsG0280009917.01.T01 AT3G46500 33.333 141 84 5 168 300 31 169 5.15e-12 64.7
MsG0280009917.01.T01 AT3G46500 33.333 141 84 5 168 300 62 200 1.06e-11 64.3
MsG0280009917.01.T01 AT1G28030 25.857 321 192 13 41 336 3 302 2.53e-11 64.3
MsG0280009917.01.T01 AT1G52820 26.230 244 146 9 49 275 10 236 6.78e-11 62.4

Find 84 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGATTGGGGATTCTTTC+AGG 0.100898 2:-60737494 MsG0280009917.01.T01:intron
CATGGTTATTGTTGACTATA+TGG 0.180419 2:-60735947 MsG0280009917.01.T01:CDS
AAATTGCTTTCTTTAGAATA+TGG 0.243620 2:-60737550 MsG0280009917.01.T01:CDS
CCACAACCAGAAAAGGTTAT+TGG 0.254738 2:-60735835 MsG0280009917.01.T01:CDS
CACAACTTCCTCTTCCTATC+AGG 0.282994 2:-60737136 MsG0280009917.01.T01:intron
TTCACCTTGCTTGCAAAGAT+TGG 0.302264 2:-60737507 MsG0280009917.01.T01:CDS
TATGGGAAAAGCTTTGAAAA+TGG 0.308585 2:-60735929 MsG0280009917.01.T01:CDS
CCAGCACGGTTCAAAAGAAT+TGG 0.337705 2:-60735236 MsG0280009917.01.T01:CDS
GCATTAGGCAGGGGTTTAAC+AGG 0.341269 2:+60735718 None:intergenic
AATAGTTCATCCTCATTGAT+TGG 0.344147 2:+60735869 None:intergenic
TCAGTGATCAAACTATTTGC+AGG 0.348933 2:+60735266 None:intergenic
ATGCCTTCATTGTTAACATT+GGG 0.351742 2:-60735699 MsG0280009917.01.T01:CDS
ATGTTTGCTCGTAAACTTGA+TGG 0.352274 2:-60735191 MsG0280009917.01.T01:CDS
TCACCTTGCTTGCAAAGATT+GGG 0.354459 2:-60737506 MsG0280009917.01.T01:CDS
ACATGCCATCTTTCCTTACT+TGG 0.357431 2:+60735746 None:intergenic
CTACAACTCAATGATGTAGA+AGG 0.358199 2:-60735772 MsG0280009917.01.T01:CDS
TGAGCCATTCTAGAGTGTTT+AGG 0.363804 2:+60737167 None:intergenic
CTACATCATTGAGTTGTAGA+AGG 0.372461 2:+60735776 None:intergenic
AATTTCTTCATATCAATAAC+TGG 0.376735 2:+60737568 None:intergenic
AATTGCTTTCTTTAGAATAT+GGG 0.377850 2:-60737549 MsG0280009917.01.T01:CDS
CCCCAACATATGGAGGGATT+TGG 0.383340 2:-60737257 MsG0280009917.01.T01:CDS
TAATTTATTAAATGACTGTT+TGG 0.383441 2:-60737774 MsG0280009917.01.T01:five_prime_UTR
TCCAAATCCCTCCATATGTT+GGG 0.384809 2:+60737256 None:intergenic
TCAGTCTCAACATGATGAAT+TGG 0.397331 2:-60737623 MsG0280009917.01.T01:CDS
CCCATCTGGAACTTCTCTTC+TGG 0.398847 2:-60737704 MsG0280009917.01.T01:CDS
GGTACCATCAGTTCAAGAAT+TGG 0.408079 2:-60737683 MsG0280009917.01.T01:CDS
TGAGACTGAATATATCTTGC+TGG 0.408828 2:+60737637 None:intergenic
TTGGCAAACTCCCCAACATA+TGG 0.416272 2:-60737267 MsG0280009917.01.T01:CDS
ATGGTTATTGTTGACTATAT+GGG 0.417329 2:-60735946 MsG0280009917.01.T01:CDS
ATCCATCTGAATGGGGTGTT+AGG 0.428857 2:+60735812 None:intergenic
GAAGAGATCAAGAACCCATC+TGG 0.444829 2:-60737718 MsG0280009917.01.T01:CDS
ATGTAGAAGGGCTCCAAGTA+AGG 0.453529 2:-60735759 MsG0280009917.01.T01:CDS
GTTACATAATTTATTGTCGT+TGG 0.455362 2:+60735011 None:intergenic
GTGATGAGCAAAAGCTTGAT+TGG 0.457049 2:-60737217 MsG0280009917.01.T01:CDS
CTTGGTGGAGAAAGTAAAGT+TGG 0.464680 2:-60737336 MsG0280009917.01.T01:CDS
GTCCCCAATGTTAACAATGA+AGG 0.465637 2:+60735696 None:intergenic
AATGCCTTCATTGTTAACAT+TGG 0.470273 2:-60735700 MsG0280009917.01.T01:CDS
TCATGATGTAAGTTCTTCCT+TGG 0.478099 2:-60737354 MsG0280009917.01.T01:CDS
GCTATATCCTCAGTTCATCT+AGG 0.481810 2:+60735159 None:intergenic
GTCCAAATCCCTCCATATGT+TGG 0.484164 2:+60737255 None:intergenic
CACCTTGCTTGCAAAGATTG+GGG 0.488195 2:-60737505 MsG0280009917.01.T01:CDS
AAATAGAGAGAGAACCTGAT+AGG 0.489362 2:+60737122 None:intergenic
TCCTTGTCCACAACCAGAAA+AGG 0.489462 2:-60735842 MsG0280009917.01.T01:CDS
TTGGCCAATTCTTGAACTGA+TGG 0.494688 2:+60737679 None:intergenic
GAGTGCTGATCCATCTGAAT+GGG 0.501607 2:+60735804 None:intergenic
TGATGTAAGTTCTTCCTTGG+TGG 0.504771 2:-60737351 MsG0280009917.01.T01:CDS
TAACAATGAAGGCATTAGGC+AGG 0.517955 2:+60735707 None:intergenic
ATCCCCAATCTTTGCAAGCA+AGG 0.520219 2:+60737503 None:intergenic
ATGTTAACAATGAAGGCATT+AGG 0.520720 2:+60735703 None:intergenic
GGGCTCCAAGTAAGGAAAGA+TGG 0.528505 2:-60735751 MsG0280009917.01.T01:CDS
TAGAAGAGAGAGTAGAGCAA+TGG 0.534422 2:-60737740 MsG0280009917.01.T01:exon
TTCTATACTTCAAGACATGA+TGG 0.535950 2:-60735299 MsG0280009917.01.T01:CDS
AACAATGAAGGCATTAGGCA+GGG 0.538683 2:+60735708 None:intergenic
TGTTGCTAGGTTATAACTAA+CGG 0.538885 2:-60735389 MsG0280009917.01.T01:intron
AGAGAGAACCTGATAGGAAG+AGG 0.540113 2:+60737128 None:intergenic
TGATGAGCAAAAGCTTGATT+GGG 0.547787 2:-60737216 MsG0280009917.01.T01:CDS
CCTTCCTAAACACTCTAGAA+TGG 0.549114 2:-60737171 MsG0280009917.01.T01:CDS
GGCCTAACACCCCATTCAGA+TGG 0.550046 2:-60735814 MsG0280009917.01.T01:CDS
TAACATTGGGGACATTCTTG+AGG 0.565562 2:-60735686 MsG0280009917.01.T01:intron
TTGGATTAAAAGAATACTTG+AGG 0.570304 2:-60735217 MsG0280009917.01.T01:CDS
TTCAAGACATGATGGAGAGA+TGG 0.570854 2:-60735291 MsG0280009917.01.T01:CDS
ACAATGAAGGCATTAGGCAG+GGG 0.577553 2:+60735709 None:intergenic
TGCCTTCATTGTTAACATTG+GGG 0.578049 2:-60735698 MsG0280009917.01.T01:CDS
CTGATAGGAAGAGGAAGTTG+TGG 0.579866 2:+60737137 None:intergenic
ATTAATAACGATGTGCACAT+TGG 0.580768 2:+60735096 None:intergenic
GCAAACTCCCCAACATATGG+AGG 0.582747 2:-60737264 MsG0280009917.01.T01:CDS
CATTCTAGAGTGTTTAGGAA+GGG 0.583502 2:+60737172 None:intergenic
TGAGTGCTGATCCATCTGAA+TGG 0.586130 2:+60735803 None:intergenic
CCATTCTAGAGTGTTTAGGA+AGG 0.587149 2:+60737171 None:intergenic
TACAACTCAATGATGTAGAA+GGG 0.597549 2:-60735771 MsG0280009917.01.T01:CDS
AAGTAAGGAAAGATGGCATG+TGG 0.601365 2:-60735744 MsG0280009917.01.T01:CDS
CATATAGTCAACAATAACCA+TGG 0.605906 2:+60735948 None:intergenic
ACCAGAAGAGAAGTTCCAGA+TGG 0.606109 2:+60737703 None:intergenic
CCAAATCCCTCCATATGTTG+GGG 0.608474 2:+60737257 None:intergenic
ATCAGTTCAAGAATTGGCCA+AGG 0.614070 2:-60737677 MsG0280009917.01.T01:CDS
CCAGAAGAGAAGTTCCAGAT+GGG 0.637829 2:+60737704 None:intergenic
CAACTTTACTTTCTCCACCA+AGG 0.640529 2:+60737337 None:intergenic
TTTCTGGTTGTGGACAAGGA+GGG 0.654791 2:+60735845 None:intergenic
AGTAAGGAAAGATGGCATGT+GGG 0.664271 2:-60735743 MsG0280009917.01.T01:CDS
CAAACTCCCCAACATATGGA+GGG 0.666990 2:-60737263 MsG0280009917.01.T01:CDS
AGTCTTTCCTAGATGAACTG+AGG 0.676945 2:-60735166 MsG0280009917.01.T01:CDS
TCACTGAAGAAACACCAGCA+CGG 0.716286 2:-60735250 MsG0280009917.01.T01:CDS
AGTGCTGATCCATCTGAATG+GGG 0.731831 2:+60735805 None:intergenic
AAGATGGTGTCCAATCAATG+AGG 0.755431 2:-60735879 MsG0280009917.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATTTATAAAAGAAAATT+GGG + Chr2:60737302-60737321 None:intergenic 10.0%
!! TCATATTTATAAAAGAAAAT+TGG + Chr2:60737303-60737322 None:intergenic 10.0%
!!! AGTATAATTTTATTTTTCAA+GGG - Chr2:60736304-60736323 MsG0280009917.01.T01:intron 10.0%
!!! ATTATATTTTAACATAATAG+GGG + Chr2:60735998-60736017 None:intergenic 10.0%
!!! CACATATTTTAATTTTATTT+TGG + Chr2:60736037-60736056 None:intergenic 10.0%
!! ACAAAAATGATTTAATAAGT+GGG + Chr2:60736578-60736597 None:intergenic 15.0%
!! AGTGCATATTTAATTATTAA+GGG - Chr2:60736245-60736264 MsG0280009917.01.T01:intron 15.0%
!! ATACTCTTTCAAAAAAAAAA+AGG + Chr2:60736522-60736541 None:intergenic 15.0%
!! TAATTTATTAAATGACTGTT+TGG - Chr2:60735008-60735027 MsG0280009917.01.T01:three_prime_UTR 15.0%
!! TACAAAAATGATTTAATAAG+TGG + Chr2:60736579-60736598 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG - Chr2:60736244-60736263 MsG0280009917.01.T01:intron 15.0%
!!! AATTATTTGTTAATGTGTAT+TGG - Chr2:60735392-60735411 MsG0280009917.01.T01:intron 15.0%
!!! ATGAATTAACTTTTCTTAAA+TGG - Chr2:60736162-60736181 MsG0280009917.01.T01:intron 15.0%
!!! GAGTATAATTTTATTTTTCA+AGG - Chr2:60736303-60736322 MsG0280009917.01.T01:intron 15.0%
!! AATGGATACATATGTATATA+GGG + Chr2:60737125-60737144 None:intergenic 20.0%
!! AATTTCTTCATATCAATAAC+TGG + Chr2:60735217-60735236 None:intergenic 20.0%
!! ATATAAAAAACCTACTTGTA+AGG - Chr2:60736540-60736559 MsG0280009917.01.T01:intron 20.0%
!! ATATTTAATTATTAAGGGAG+GGG - Chr2:60736250-60736269 MsG0280009917.01.T01:intron 20.0%
!! CAACCTTAAATAAAAATTGT+TGG - Chr2:60735836-60735855 MsG0280009917.01.T01:CDS 20.0%
!! CATATTTAATTATTAAGGGA+GGG - Chr2:60736249-60736268 MsG0280009917.01.T01:intron 20.0%
!! GTAATTCAAACATCTTATAA+AGG - Chr2:60736276-60736295 MsG0280009917.01.T01:intron 20.0%
!! TAAATTATGTAACACCTAAT+TGG - Chr2:60737781-60737800 MsG0280009917.01.T01:five_prime_UTR 20.0%
!! TCTTTCAAAAAAAAAAAGGT+AGG + Chr2:60736518-60736537 None:intergenic 20.0%
!!! AAATTGCTTTCTTTAGAATA+TGG - Chr2:60735232-60735251 MsG0280009917.01.T01:CDS 20.0%
!!! AAGTATTTCTCATCTAAAAT+TGG + Chr2:60735807-60735826 None:intergenic 20.0%
!!! AATTAACTTTTCTTAAATGG+TGG - Chr2:60736165-60736184 MsG0280009917.01.T01:intron 20.0%
!!! AATTGCTTTCTTTAGAATAT+GGG - Chr2:60735233-60735252 MsG0280009917.01.T01:CDS 20.0%
!!! AGTGTATATTTTAACATAAG+AGG - Chr2:60736332-60736351 MsG0280009917.01.T01:intron 20.0%
!!! CGTTTTAGAATATTTTTGTT+TGG - Chr2:60736474-60736493 MsG0280009917.01.T01:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - Chr2:60736333-60736352 MsG0280009917.01.T01:intron 20.0%
!!! TCTTTTATAAATATGACCAA+AGG - Chr2:60737307-60737326 MsG0280009917.01.T01:CDS 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - Chr2:60736334-60736353 MsG0280009917.01.T01:intron 20.0%
! AAAATGATTTAATAAGTGGG+AGG + Chr2:60736575-60736594 None:intergenic 25.0%
! AAATGGATGAAAAAGAAATG+AGG - Chr2:60736870-60736889 MsG0280009917.01.T01:intron 25.0%
! AACAATCTTCACTTTACAAA+CGG + Chr2:60735726-60735745 None:intergenic 25.0%
! AGAGAGAATAAAGTTATAAG+TGG + Chr2:60735751-60735770 None:intergenic 25.0%
! CTTTCTCTTATAAATAAGTC+CGG + Chr2:60737216-60737235 None:intergenic 25.0%
! GAATGGATACATATGTATAT+AGG + Chr2:60737126-60737145 None:intergenic 25.0%
! GCATATTTAATTATTAAGGG+AGG - Chr2:60736248-60736267 MsG0280009917.01.T01:intron 25.0%
! GTAAATTCAACTCAAATTCT+AGG + Chr2:60735688-60735707 None:intergenic 25.0%
! GTAATTTAAGCATCTTTGAA+GGG - Chr2:60736365-60736384 MsG0280009917.01.T01:intron 25.0%
! GTTACATAATTTATTGTCGT+TGG + Chr2:60737774-60737793 None:intergenic 25.0%
! TACAGTGTTTATGTTTGTAA+CGG - Chr2:60736738-60736757 MsG0280009917.01.T01:intron 25.0%
! TAGTAATAATGACTGAATAG+CGG - Chr2:60735772-60735791 MsG0280009917.01.T01:CDS 25.0%
! TATTTAATTATTAAGGGAGG+GGG - Chr2:60736251-60736270 MsG0280009917.01.T01:intron 25.0%
! TCAAACATCTTATAAAGGAT+GGG - Chr2:60736281-60736300 MsG0280009917.01.T01:intron 25.0%
! TGTAATTTAAGCATCTTTGA+AGG - Chr2:60736364-60736383 MsG0280009917.01.T01:intron 25.0%
! TTCAAACATCTTATAAAGGA+TGG - Chr2:60736280-60736299 MsG0280009917.01.T01:intron 25.0%
! TTGGATTAAAAGAATACTTG+AGG - Chr2:60737565-60737584 MsG0280009917.01.T01:CDS 25.0%
!! ATGGTTATTGTTGACTATAT+GGG - Chr2:60736836-60736855 MsG0280009917.01.T01:intron 25.0%
!! TATTTAAAGTACAAAGAGTG+TGG - Chr2:60736640-60736659 MsG0280009917.01.T01:intron 25.0%
!! TGTCAGAAAAGAAAAAGTTT+TGG - Chr2:60735496-60735515 MsG0280009917.01.T01:intron 25.0%
!!! AACGTTTTTGAGAAAAGAAA+TGG - Chr2:60737149-60737168 MsG0280009917.01.T01:CDS 25.0%
!!! AACTTTTTCTTTTCTGACAT+TGG + Chr2:60735495-60735514 None:intergenic 25.0%
!!! ATATTTTAACATAATAGGGG+AGG + Chr2:60735995-60736014 None:intergenic 25.0%
!!! CATGGATAACTTTTTTAGTT+CGG + Chr2:60736819-60736838 None:intergenic 25.0%
!!! CGTCCAACAATTTTTATTTA+AGG + Chr2:60735842-60735861 None:intergenic 25.0%
!!! GTAGGTTTTATATATGAGTT+GGG + Chr2:60736500-60736519 None:intergenic 25.0%
!!! TATTTTAACATAATAGGGGA+GGG + Chr2:60735994-60736013 None:intergenic 25.0%
!!! TTAACAAAAGTTGATGTATC+TGG - Chr2:60737241-60737260 MsG0280009917.01.T01:CDS 25.0%
AATAGTTCATCCTCATTGAT+TGG + Chr2:60736916-60736935 None:intergenic 30.0%
AATGCCTTCATTGTTAACAT+TGG - Chr2:60737082-60737101 MsG0280009917.01.T01:intron 30.0%
AGTAATAATGACTGAATAGC+GGG - Chr2:60735773-60735792 MsG0280009917.01.T01:CDS 30.0%
ATGCCTTCATTGTTAACATT+GGG - Chr2:60737083-60737102 MsG0280009917.01.T01:intron 30.0%
ATTAATAACGATGTGCACAT+TGG + Chr2:60737689-60737708 None:intergenic 30.0%
CATATAGTCAACAATAACCA+TGG + Chr2:60736837-60736856 None:intergenic 30.0%
CGAACTAAAAAAGTTATCCA+TGG - Chr2:60736817-60736836 MsG0280009917.01.T01:intron 30.0%
CGAATGATTAATACTACCTT+TGG + Chr2:60737326-60737345 None:intergenic 30.0%
TAAAAAACCTACTTGTAAGG+TGG - Chr2:60736543-60736562 MsG0280009917.01.T01:intron 30.0%
TACAACTCAATGATGTAGAA+GGG - Chr2:60737011-60737030 MsG0280009917.01.T01:intron 30.0%
TGTAATTCAAGCATCTTTGA+GGG + Chr2:60735968-60735987 None:intergenic 30.0%
TGTTGCTAGGTTATAACTAA+CGG - Chr2:60737393-60737412 MsG0280009917.01.T01:intron 30.0%
TTCTATACTTCAAGACATGA+TGG - Chr2:60737483-60737502 MsG0280009917.01.T01:intron 30.0%
! AACTGTTGAAATCTTTTCCT+TGG + Chr2:60735125-60735144 None:intergenic 30.0%
! ATCATCATGATTTTGTTGCT+AGG - Chr2:60737380-60737399 MsG0280009917.01.T01:intron 30.0%
! CATGGTTATTGTTGACTATA+TGG - Chr2:60736835-60736854 MsG0280009917.01.T01:intron 30.0%
! TTCTCAAAAACGTTGATGAA+TGG + Chr2:60737143-60737162 None:intergenic 30.0%
! TTTTCTTTTCTGACATTGGA+AGG + Chr2:60735491-60735510 None:intergenic 30.0%
!! ATGTTAACAATGAAGGCATT+AGG + Chr2:60737082-60737101 None:intergenic 30.0%
!! ATTTTAACATAATAGGGGAG+GGG + Chr2:60735993-60736012 None:intergenic 30.0%
!! GGTAGGTTTTATATATGAGT+TGG + Chr2:60736501-60736520 None:intergenic 30.0%
!! TATGGGAAAAGCTTTGAAAA+TGG - Chr2:60736853-60736872 MsG0280009917.01.T01:intron 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG - Chr2:60736337-60736356 MsG0280009917.01.T01:intron 30.0%
!!! ATGAGGATGTTTTTTGAAGA+TGG - Chr2:60736887-60736906 MsG0280009917.01.T01:intron 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG - Chr2:60736338-60736357 MsG0280009917.01.T01:intron 30.0%
AAATAGAGAGAGAACCTGAT+AGG + Chr2:60735663-60735682 None:intergenic 35.0%
ATGTTTGCTCGTAAACTTGA+TGG - Chr2:60737591-60737610 MsG0280009917.01.T01:CDS 35.0%
CTACAACTCAATGATGTAGA+AGG - Chr2:60737010-60737029 MsG0280009917.01.T01:intron 35.0%
CTCTTATAAATAAGTCCGGA+GGG + Chr2:60737212-60737231 None:intergenic 35.0%
GTAATTCAAGCATCTTTGAG+GGG + Chr2:60735967-60735986 None:intergenic 35.0%
GTGTAATTCAAGCATCTTTG+AGG + Chr2:60735969-60735988 None:intergenic 35.0%
TCAGTCTCAACATGATGAAT+TGG - Chr2:60735159-60735178 MsG0280009917.01.T01:exon 35.0%
TCAGTGATCAAACTATTTGC+AGG + Chr2:60737519-60737538 None:intergenic 35.0%
TCATGATGTAAGTTCTTCCT+TGG - Chr2:60735428-60735447 MsG0280009917.01.T01:intron 35.0%
TCTCTTATAAATAAGTCCGG+AGG + Chr2:60737213-60737232 None:intergenic 35.0%
TGAGACTGAATATATCTTGC+TGG + Chr2:60735148-60735167 None:intergenic 35.0%
TGATGAGCAAAAGCTTGATT+GGG - Chr2:60735566-60735585 MsG0280009917.01.T01:intron 35.0%
TGCCTTCATTGTTAACATTG+GGG - Chr2:60737084-60737103 MsG0280009917.01.T01:intron 35.0%
! ATTTAAGCATCTTTGAAGGG+TGG - Chr2:60736368-60736387 MsG0280009917.01.T01:intron 35.0%
! CTACATCATTGAGTTGTAGA+AGG + Chr2:60737009-60737028 None:intergenic 35.0%
! TGTTAAAGTGTCTCTCACAT+CGG + Chr2:60736613-60736632 None:intergenic 35.0%
! TTAATGTGTATTGGTGTAGC+TGG - Chr2:60735401-60735420 MsG0280009917.01.T01:intron 35.0%
! TTTAAGCATCTTTGAAGGGT+GGG - Chr2:60736369-60736388 MsG0280009917.01.T01:intron 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG - Chr2:60736339-60736358 MsG0280009917.01.T01:intron 35.0%
!! CATTCTAGAGTGTTTAGGAA+GGG + Chr2:60735613-60735632 None:intergenic 35.0%
AAGATGGTGTCCAATCAATG+AGG - Chr2:60736903-60736922 MsG0280009917.01.T01:intron 40.0%
AAGTAAGGAAAGATGGCATG+TGG - Chr2:60737038-60737057 MsG0280009917.01.T01:intron 40.0%
ACATGCCATCTTTCCTTACT+TGG + Chr2:60737039-60737058 None:intergenic 40.0%
AGTAAGGAAAGATGGCATGT+GGG - Chr2:60737039-60737058 MsG0280009917.01.T01:intron 40.0%
AGTCTTTCCTAGATGAACTG+AGG - Chr2:60737616-60737635 MsG0280009917.01.T01:CDS 40.0%
ATCAGTTCAAGAATTGGCCA+AGG - Chr2:60735105-60735124 MsG0280009917.01.T01:three_prime_UTR 40.0%
CAAAGATTGGGGATTCTTTC+AGG - Chr2:60735288-60735307 MsG0280009917.01.T01:CDS 40.0%
CAACTTTACTTTCTCCACCA+AGG + Chr2:60735448-60735467 None:intergenic 40.0%
CCACAACCAGAAAAGGTTAT+TGG - Chr2:60736947-60736966 MsG0280009917.01.T01:intron 40.0%
CTCTGCATGACAAAGAACAT+AGG + Chr2:60736775-60736794 None:intergenic 40.0%
CTTGGTGGAGAAAGTAAAGT+TGG - Chr2:60735446-60735465 MsG0280009917.01.T01:intron 40.0%
GAAACTTCCACCTTACAAGT+AGG + Chr2:60736553-60736572 None:intergenic 40.0%
GCTATATCCTCAGTTCATCT+AGG + Chr2:60737626-60737645 None:intergenic 40.0%
GGTACCATCAGTTCAAGAAT+TGG - Chr2:60735099-60735118 MsG0280009917.01.T01:three_prime_UTR 40.0%
GTCCCCAATGTTAACAATGA+AGG + Chr2:60737089-60737108 None:intergenic 40.0%
GTGATGAGCAAAAGCTTGAT+TGG - Chr2:60735565-60735584 MsG0280009917.01.T01:intron 40.0%
TAACATTGGGGACATTCTTG+AGG - Chr2:60737096-60737115 MsG0280009917.01.T01:intron 40.0%
TAGAAGAGAGAGTAGAGCAA+TGG - Chr2:60735042-60735061 MsG0280009917.01.T01:three_prime_UTR 40.0%
TCACCTTGCTTGCAAAGATT+GGG - Chr2:60735276-60735295 MsG0280009917.01.T01:CDS 40.0%
TCCAAATCCCTCCATATGTT+GGG + Chr2:60735529-60735548 None:intergenic 40.0%
TGATGTAAGTTCTTCCTTGG+TGG - Chr2:60735431-60735450 MsG0280009917.01.T01:intron 40.0%
TTATAAATAAGTCCGGAGGG+AGG + Chr2:60737209-60737228 None:intergenic 40.0%
TTCACCTTGCTTGCAAAGAT+TGG - Chr2:60735275-60735294 MsG0280009917.01.T01:CDS 40.0%
TTGGCCAATTCTTGAACTGA+TGG + Chr2:60735106-60735125 None:intergenic 40.0%
! CCTTCCTAAACACTCTAGAA+TGG - Chr2:60735611-60735630 MsG0280009917.01.T01:intron 40.0%
! CTCTCACATCGGATTAGATA+TGG + Chr2:60736602-60736621 None:intergenic 40.0%
! GAAAAGAAATGGATTCTCCG+CGG - Chr2:60737160-60737179 MsG0280009917.01.T01:CDS 40.0%
! GTTAGGCCAATAACCTTTTC+TGG + Chr2:60736956-60736975 None:intergenic 40.0%
! TTAAGCATCTTTGAAGGGTG+GGG - Chr2:60736370-60736389 MsG0280009917.01.T01:intron 40.0%
! TTCAAGACATGATGGAGAGA+TGG - Chr2:60737491-60737510 MsG0280009917.01.T01:intron 40.0%
!! AACAATGAAGGCATTAGGCA+GGG + Chr2:60737077-60737096 None:intergenic 40.0%
!! CCATTCTAGAGTGTTTAGGA+AGG + Chr2:60735614-60735633 None:intergenic 40.0%
!! TAACAATGAAGGCATTAGGC+AGG + Chr2:60737078-60737097 None:intergenic 40.0%
!! TGAGCCATTCTAGAGTGTTT+AGG + Chr2:60735618-60735637 None:intergenic 40.0%
!!! CCAATAACCTTTTCTGGTTG+TGG + Chr2:60736950-60736969 None:intergenic 40.0%
ACCAGAAGAGAAGTTCCAGA+TGG + Chr2:60735082-60735101 None:intergenic 45.0%
AGAGAGAACCTGATAGGAAG+AGG + Chr2:60735657-60735676 None:intergenic 45.0%
ATCCCCAATCTTTGCAAGCA+AGG + Chr2:60735282-60735301 None:intergenic 45.0%
ATGTAGAAGGGCTCCAAGTA+AGG - Chr2:60737023-60737042 MsG0280009917.01.T01:intron 45.0%
CAAACTCCCCAACATATGGA+GGG - Chr2:60735519-60735538 MsG0280009917.01.T01:intron 45.0%
CACAACTTCCTCTTCCTATC+AGG - Chr2:60735646-60735665 MsG0280009917.01.T01:intron 45.0%
CACCTTGCTTGCAAAGATTG+GGG - Chr2:60735277-60735296 MsG0280009917.01.T01:CDS 45.0%
CCAAATCCCTCCATATGTTG+GGG + Chr2:60735528-60735547 None:intergenic 45.0%
CCAGAAGAGAAGTTCCAGAT+GGG + Chr2:60735081-60735100 None:intergenic 45.0%
CCAGCACGGTTCAAAAGAAT+TGG - Chr2:60737546-60737565 MsG0280009917.01.T01:CDS 45.0%
CTGATAGGAAGAGGAAGTTG+TGG + Chr2:60735648-60735667 None:intergenic 45.0%
GAAGAGATCAAGAACCCATC+TGG - Chr2:60735064-60735083 MsG0280009917.01.T01:three_prime_UTR 45.0%
GTCCAAATCCCTCCATATGT+TGG + Chr2:60735530-60735549 None:intergenic 45.0%
TCACTGAAGAAACACCAGCA+CGG - Chr2:60737532-60737551 MsG0280009917.01.T01:CDS 45.0%
TCCTTGTCCACAACCAGAAA+AGG - Chr2:60736940-60736959 MsG0280009917.01.T01:intron 45.0%
TTGGCAAACTCCCCAACATA+TGG - Chr2:60735515-60735534 MsG0280009917.01.T01:intron 45.0%
! ATCCATCTGAATGGGGTGTT+AGG + Chr2:60736973-60736992 None:intergenic 45.0%
! ATTCAAGCATCTTTGAGGGG+AGG + Chr2:60735964-60735983 None:intergenic 45.0%
! CCAATTCTTTTGAACCGTGC+TGG + Chr2:60737549-60737568 None:intergenic 45.0%
! TTCAAGCATCTTTGAGGGGA+GGG + Chr2:60735963-60735982 None:intergenic 45.0%
!! ACAATGAAGGCATTAGGCAG+GGG + Chr2:60737076-60737095 None:intergenic 45.0%
!! AGTGCTGATCCATCTGAATG+GGG + Chr2:60736980-60736999 None:intergenic 45.0%
!! GAGTGCTGATCCATCTGAAT+GGG + Chr2:60736981-60737000 None:intergenic 45.0%
!! TGAGTGCTGATCCATCTGAA+TGG + Chr2:60736982-60737001 None:intergenic 45.0%
!! TTTCTGGTTGTGGACAAGGA+GGG + Chr2:60736940-60736959 None:intergenic 45.0%
!!! ACCTTTTCTGGTTGTGGACA+AGG + Chr2:60736944-60736963 None:intergenic 45.0%
!!! TTTTCTGGTTGTGGACAAGG+AGG + Chr2:60736941-60736960 None:intergenic 45.0%
!!! AATTATATTTTAACATAATA+GGG + Chr2:60735999-60736018 None:intergenic 5.0%
!!! ACATATTTTAATTTTATTTT+GGG + Chr2:60736036-60736055 None:intergenic 5.0%
!!! TAATTATATTTTAACATAAT+AGG + Chr2:60736000-60736019 None:intergenic 5.0%
CCCCAACATATGGAGGGATT+TGG - Chr2:60735525-60735544 MsG0280009917.01.T01:intron 50.0%
CTACGGTCACTCTATAACCG+CGG + Chr2:60737180-60737199 None:intergenic 50.0%
GCAAACTCCCCAACATATGG+AGG - Chr2:60735518-60735537 MsG0280009917.01.T01:intron 50.0%
GCATTAGGCAGGGGTTTAAC+AGG + Chr2:60737067-60737086 None:intergenic 50.0%
GGGCTCCAAGTAAGGAAAGA+TGG - Chr2:60737031-60737050 MsG0280009917.01.T01:intron 50.0%
! CCCATCTGGAACTTCTCTTC+TGG - Chr2:60735078-60735097 MsG0280009917.01.T01:three_prime_UTR 50.0%
! TCAAGCATCTTTGAGGGGAG+GGG + Chr2:60735962-60735981 None:intergenic 50.0%
CGCGGTTATAGAGTGACCGT+AGG - Chr2:60737178-60737197 MsG0280009917.01.T01:CDS 55.0%
GGCCTAACACCCCATTCAGA+TGG - Chr2:60736968-60736987 MsG0280009917.01.T01:intron 55.0%
! CAAGCATCTTTGAGGGGAGG+GGG + Chr2:60735961-60735980 None:intergenic 55.0%
CCGGAGGGAGGATCTTCCTA+CGG + Chr2:60737197-60737216 None:intergenic 60.0%
CCGTAGGAAGATCCTCCCTC+CGG - Chr2:60737194-60737213 MsG0280009917.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 60735002 60737802 60735002 ID=MsG0280009917.01;Name=MsG0280009917.01
Chr2 mRNA 60735002 60737802 60735002 ID=MsG0280009917.01.T01;Parent=MsG0280009917.01;Name=MsG0280009917.01.T01;_AED=0.45;_eAED=0.45;_QI=59|1|1|1|1|1|4|158|354
Chr2 exon 60735002 60735402 60735002 ID=MsG0280009917.01.T01:exon:34417;Parent=MsG0280009917.01.T01
Chr2 exon 60735687 60736011 60735687 ID=MsG0280009917.01.T01:exon:34416;Parent=MsG0280009917.01.T01
Chr2 exon 60737137 60737384 60737137 ID=MsG0280009917.01.T01:exon:34415;Parent=MsG0280009917.01.T01
Chr2 exon 60737495 60737802 60737495 ID=MsG0280009917.01.T01:exon:34414;Parent=MsG0280009917.01.T01
Chr2 five_prime_UTR 60737744 60737802 60737744 ID=MsG0280009917.01.T01:five_prime_utr;Parent=MsG0280009917.01.T01
Chr2 CDS 60737495 60737743 60737495 ID=MsG0280009917.01.T01:cds;Parent=MsG0280009917.01.T01
Chr2 CDS 60737137 60737384 60737137 ID=MsG0280009917.01.T01:cds;Parent=MsG0280009917.01.T01
Chr2 CDS 60735687 60736011 60735687 ID=MsG0280009917.01.T01:cds;Parent=MsG0280009917.01.T01
Chr2 CDS 60735160 60735402 60735160 ID=MsG0280009917.01.T01:cds;Parent=MsG0280009917.01.T01
Chr2 three_prime_UTR 60735002 60735159 60735002 ID=MsG0280009917.01.T01:three_prime_utr;Parent=MsG0280009917.01.T01
Gene Sequence

>MsG0280009917.01.T01

ATGGAAGAGATCAAGAACCCATCTGGAACTTCTCTTCTGGTACCATCAGTTCAAGAATTGGCCAAGGAAAAGATTTCAACAGTTCCAGCAAGATATATTCAGTCTCAACATGATGAATTGGTCATCAATGAAGCTAATAGTATACTTGAAATTCCAGTTATTGATATGAAGAAATTGCTTTCTTTAGAATATGGGAGTTCAGAATTGTCTAAGCTTCACCTTGCTTGCAAAGATTGGGGATTCTTTCAGCTGGTAAATCATGATGTAAGTTCTTCCTTGGTGGAGAAAGTAAAGTTGGAGACTCAAGATTTCTTCAACCTTCCAATGTCAGAAAAGAAAAAGTTTTGGCAAACTCCCCAACATATGGAGGGATTTGGACAAGCATTTGTTGTGAGTGATGAGCAAAAGCTTGATTGGGCAGATCTTTTCTTTATGACTACCCTTCCTAAACACTCTAGAATGGCTCACTTGTTTCCACAACTTCCTCTTCCTATCAGAGATACTTTTGAGCTTTACTCAACCGAACTAAAAAAGTTATCCATGGTTATTGTTGACTATATGGGAAAAGCTTTGAAAATGGATGAAAAAGAAATGAGGATGTTTTTTGAAGATGGTGTCCAATCAATGAGGATGAACTATTACCCTCCTTGTCCACAACCAGAAAAGGTTATTGGCCTAACACCCCATTCAGATGGATCAGCACTCACTATCCTTCTACAACTCAATGATGTAGAAGGGCTCCAAGTAAGGAAAGATGGCATGTGGGTTCCTGTTAAACCCCTGCCTAATGCCTTCATTGTTAACATTGGGGACATTCTTGAGGTTATAACTAACGGAATATATCGAAGTATCGAGCATCGAGCAATTGTAAACTCTGAAAAAGAAAGAATGTCAATTGCAACATTCTATACTTCAAGACATGATGGAGAGATGGCTCCTGCAAATAGTTTGATCACTGAAGAAACACCAGCACGGTTCAAAAGAATTGGATTAAAAGAATACTTGAGGAATATGTTTGCTCGTAAACTTGATGGCAAGTCTTTCCTAGATGAACTGAGGATATAG

Protein sequence

>MsG0280009917.01.T01

MEEIKNPSGTSLLVPSVQELAKEKISTVPARYIQSQHDELVINEANSILEIPVIDMKKLLSLEYGSSELSKLHLACKDWGFFQLVNHDVSSSLVEKVKLETQDFFNLPMSEKKKFWQTPQHMEGFGQAFVVSDEQKLDWADLFFMTTLPKHSRMAHLFPQLPLPIRDTFELYSTELKKLSMVIVDYMGKALKMDEKEMRMFFEDGVQSMRMNYYPPCPQPEKVIGLTPHSDGSALTILLQLNDVEGLQVRKDGMWVPVKPLPNAFIVNIGDILEVITNGIYRSIEHRAIVNSEKERMSIATFYTSRHDGEMAPANSLITEETPARFKRIGLKEYLRNMFARKLDGKSFLDELRI*