AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003849.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003849.01.T01 MTR_1g070100 93.985 133 8 0 73 205 130 262 1.20e-89 264
MsG0180003849.01.T01 MTR_1g070085 90.977 133 12 0 73 205 134 266 2.77e-86 256
MsG0180003849.01.T01 MTR_1g070085 90.977 133 12 0 73 205 212 344 2.94e-85 256
MsG0180003849.01.T01 MTR_1g070085 95.588 68 3 0 1 68 1 68 2.36e-38 135
MsG0180003849.01.T01 MTR_1g070085 90.977 133 12 0 73 205 212 344 2.94e-85 256
MsG0180003849.01.T01 MTR_1g070085 95.588 68 3 0 1 68 1 68 2.36e-38 135
MsG0180003849.01.T01 MTR_1g070135 66.142 127 43 0 73 199 212 338 2.16e-59 189
MsG0180003849.01.T01 MTR_1g070135 68.116 69 21 1 1 68 1 69 9.13e-26 102
MsG0180003849.01.T01 MTR_1g070120 61.905 126 48 0 73 198 212 337 5.17e-54 176
MsG0180003849.01.T01 MTR_1g070120 68.116 69 21 1 1 68 1 69 5.48e-25 100
MsG0180003849.01.T01 MTR_1g070080 62.992 127 47 0 73 199 212 338 3.47e-53 174
MsG0180003849.01.T01 MTR_1g070080 66.667 78 24 2 1 76 1 78 8.22e-27 105
MsG0180003849.01.T01 MTR_1g070110 61.417 127 49 0 73 199 107 233 4.53e-53 170
MsG0180003849.01.T01 MTR_6g015950 52.381 126 59 1 73 197 211 336 9.22e-39 136
MsG0180003849.01.T01 MTR_5g032870 40.945 127 75 0 73 199 218 344 4.10e-31 116
MsG0180003849.01.T01 MTR_5g032880 40.909 132 78 0 68 199 551 682 8.38e-31 119
MsG0180003849.01.T01 MTR_5g032880 39.831 118 71 0 68 185 205 322 4.98e-28 110
MsG0180003849.01.T01 MTR_7g016090 50.435 115 56 1 74 187 213 327 5.94e-30 113
MsG0180003849.01.T01 MTR_7g016090 50.435 115 56 1 74 187 211 325 6.65e-30 113
MsG0180003849.01.T01 MTR_8g024120 40.000 115 69 0 73 187 216 330 4.83e-28 108
MsG0180003849.01.T01 MTR_1g034120 41.818 110 62 1 75 182 221 330 1.64e-27 107
MsG0180003849.01.T01 MTR_7g016080 44.737 114 54 2 75 187 214 319 2.05e-26 103
MsG0180003849.01.T01 MTR_1g034060 40.909 110 63 1 75 182 221 330 2.38e-26 103
MsG0180003849.01.T01 MTR_3g092890 38.400 125 76 1 73 196 209 333 2.42e-26 103
MsG0180003849.01.T01 MTR_7g060910 50.588 85 42 0 117 201 113 197 3.14e-26 100
MsG0180003849.01.T01 MTR_1g070135 68.116 69 21 1 1 68 1 69 4.56e-26 102
MsG0180003849.01.T01 MTR_1g070135 71.429 49 14 0 73 121 212 260 4.39e-18 80.5
MsG0180003849.01.T01 MTR_7g063730 39.655 116 69 1 73 187 237 352 2.66e-25 101
MsG0180003849.01.T01 MTR_7g062580 40.517 116 68 1 73 187 228 343 1.71e-24 99.0
MsG0180003849.01.T01 MTR_0009s0050 40.517 116 68 1 73 187 40 155 2.59e-24 94.7
MsG0180003849.01.T01 MTR_5g005570 43.925 107 54 1 73 179 208 308 1.04e-23 96.7
MsG0180003849.01.T01 MTR_2g437380 43.119 109 60 1 73 179 133 241 1.22e-23 95.1
MsG0180003849.01.T01 MTR_7g062550 40.517 116 68 1 73 187 233 348 1.33e-23 96.7
MsG0180003849.01.T01 MTR_0009s0050 40.517 116 68 1 73 187 122 237 1.81e-23 94.7
MsG0180003849.01.T01 MTR_0009s0050 40.517 116 68 1 73 187 122 237 1.84e-23 94.4
MsG0180003849.01.T01 MTR_2g437380 43.119 109 60 1 73 179 227 335 3.34e-23 95.5
MsG0180003849.01.T01 MTR_7g068650 41.667 108 62 1 73 179 234 341 5.72e-23 95.1
MsG0180003849.01.T01 MTR_8g009080 47.273 110 53 2 68 173 262 370 5.98e-23 95.1
MsG0180003849.01.T01 MTR_0009s0050 40.517 116 68 1 73 187 220 335 7.46e-23 94.4
MsG0180003849.01.T01 MTR_0009s0050 40.517 116 68 1 73 187 220 335 7.57e-23 94.7
MsG0180003849.01.T01 MTR_4g087090 40.179 112 65 1 73 182 216 327 9.39e-23 94.4
MsG0180003849.01.T01 MTR_7g062570 37.931 116 71 1 73 187 228 343 9.56e-23 94.4
MsG0180003849.01.T01 MTR_4g087110 35.714 112 70 1 73 182 217 328 1.24e-22 94.0
MsG0180003849.01.T01 MTR_1g034140 41.905 105 59 1 73 175 209 313 1.77e-22 93.2
MsG0180003849.01.T01 MTR_3g083370 41.739 115 65 2 73 186 174 287 1.97e-22 92.8
MsG0180003849.01.T01 MTR_7g062600 38.462 117 70 2 73 187 224 340 2.53e-22 93.2
MsG0180003849.01.T01 MTR_1g102070 38.136 118 72 1 76 193 246 362 2.60e-22 93.2
MsG0180003849.01.T01 MTR_5g048550 39.655 116 69 1 73 187 220 335 2.68e-22 92.8
MsG0180003849.01.T01 MTR_2g069010 43.697 119 60 1 74 185 243 361 3.13e-22 93.2
MsG0180003849.01.T01 MTR_4g015790 39.815 108 64 1 73 179 242 349 3.19e-22 93.2
MsG0180003849.01.T01 MTR_3g072810 36.522 115 73 0 73 187 214 328 3.26e-22 92.4
MsG0180003849.01.T01 MTR_5g055820 38.655 119 72 1 73 190 221 339 4.60e-22 92.4
MsG0180003849.01.T01 MTR_2g069210 40.310 129 74 2 74 199 238 366 5.40e-22 92.4
MsG0180003849.01.T01 MTR_3g070860 40.708 113 66 1 68 179 224 336 6.17e-22 92.0
MsG0180003849.01.T01 MTR_2g025120 40.870 115 66 2 73 185 174 288 7.74e-22 91.3
MsG0180003849.01.T01 MTR_7g062560 39.091 110 66 1 73 181 225 334 7.87e-22 91.7
MsG0180003849.01.T01 MTR_5g055680 40.517 116 68 1 73 187 220 335 8.44e-22 91.7
MsG0180003849.01.T01 MTR_8g009090 40.000 130 73 2 74 199 235 363 8.78e-22 91.7
MsG0180003849.01.T01 MTR_8g028435 39.535 129 75 1 74 199 235 363 1.29e-21 91.3
MsG0180003849.01.T01 MTR_5g059130 37.615 109 68 0 73 181 219 327 1.59e-21 90.5
MsG0180003849.01.T01 MTR_8g009110 38.760 129 76 1 74 199 236 364 1.93e-21 90.9
MsG0180003849.01.T01 MTR_7g451860 42.056 107 56 1 73 179 215 315 2.85e-21 90.1
MsG0180003849.01.T01 MTR_7g047670 42.056 107 56 1 73 179 215 315 2.85e-21 90.1
MsG0180003849.01.T01 MTR_5g048570 37.069 116 72 1 73 187 218 333 3.41e-21 90.1
MsG0180003849.01.T01 MTR_6g464620 38.136 118 72 1 76 193 251 367 3.58e-21 90.1
MsG0180003849.01.T01 MTR_2g072890 36.207 116 73 1 73 187 227 342 4.46e-21 89.7
MsG0180003849.01.T01 MTR_3g072820 39.252 107 65 0 73 179 217 323 4.72e-21 89.4
MsG0180003849.01.T01 MTR_8g041620 35.659 129 79 1 74 198 244 372 7.01e-21 89.4
MsG0180003849.01.T01 MTR_5g055900 37.008 127 75 2 73 194 220 346 8.44e-21 89.0
MsG0180003849.01.T01 MTR_5g065010 36.290 124 74 2 76 194 217 340 1.01e-20 88.6
MsG0180003849.01.T01 MTR_3g063180 37.705 122 72 1 73 190 221 342 1.02e-20 88.6
MsG0180003849.01.T01 MTR_2g069190 38.760 129 76 1 74 199 242 370 1.06e-20 89.0
MsG0180003849.01.T01 MTR_7g102720 37.226 137 76 3 64 190 189 325 1.21e-20 88.2
MsG0180003849.01.T01 MTR_1g086550 34.906 106 68 1 75 179 207 312 1.44e-20 88.2
MsG0180003849.01.T01 MTR_4g087100 36.937 111 68 1 73 181 217 327 1.73e-20 88.2
MsG0180003849.01.T01 MTR_8g062600 34.091 132 81 1 74 199 241 372 1.77e-20 88.2
MsG0180003849.01.T01 MTR_3g026150 41.176 119 69 1 73 190 130 248 1.79e-20 86.7
MsG0180003849.01.T01 MTR_2g072910 36.207 116 73 1 73 187 226 341 1.96e-20 87.8
MsG0180003849.01.T01 MTR_1g093140 35.115 131 80 2 74 199 247 377 2.20e-20 87.8
MsG0180003849.01.T01 MTR_7g105070 36.975 119 71 2 73 187 231 349 2.24e-20 87.8
MsG0180003849.01.T01 MTR_3g045230 36.364 143 81 3 58 190 202 344 2.33e-20 87.8
MsG0180003849.01.T01 MTR_5g085330 39.130 115 62 3 73 181 175 287 2.52e-20 87.0
MsG0180003849.01.T01 MTR_8g009170 38.655 119 70 1 74 189 236 354 2.76e-20 87.4
MsG0180003849.01.T01 MTR_7g056353 39.850 133 74 1 74 200 215 347 2.85e-20 88.2
MsG0180003849.01.T01 MTR_1g032140 41.129 124 71 2 69 190 232 355 3.08e-20 87.4
MsG0180003849.01.T01 MTR_7g102820 39.252 107 65 0 76 182 256 362 3.12e-20 87.8
MsG0180003849.01.T01 MTR_8g033380 39.316 117 70 1 76 192 240 355 3.14e-20 87.4
MsG0180003849.01.T01 MTR_2g068950 41.739 115 60 2 74 181 237 351 3.25e-20 87.4
MsG0180003849.01.T01 MTR_4g132770 45.161 93 50 1 73 164 44 136 3.39e-20 83.6
MsG0180003849.01.T01 MTR_1g070185 40.171 117 70 0 74 190 241 357 3.79e-20 87.4
MsG0180003849.01.T01 MTR_7g029655 34.058 138 83 3 68 198 232 368 4.07e-20 87.0
MsG0180003849.01.T01 MTR_8g469400 32.117 137 87 1 68 198 222 358 4.11e-20 87.0
MsG0180003849.01.T01 MTR_4g116010 42.857 105 59 1 73 176 222 326 4.83e-20 86.7
MsG0180003849.01.T01 MTR_1g032250 37.500 128 78 2 69 194 239 366 4.97e-20 87.0
MsG0180003849.01.T01 MTR_5g082750 39.815 108 64 1 73 179 228 335 5.09e-20 86.7
MsG0180003849.01.T01 MTR_0009s0400 34.211 114 74 1 73 185 16 129 5.22e-20 82.8
MsG0180003849.01.T01 MTR_2g068960 41.739 115 60 2 74 181 237 351 6.09e-20 86.7
MsG0180003849.01.T01 MTR_3g026150 41.176 119 69 1 73 190 233 351 6.26e-20 86.7
MsG0180003849.01.T01 MTR_2g069060 40.000 115 68 1 74 187 223 337 7.23e-20 86.3
MsG0180003849.01.T01 MTR_0328s0030 42.000 100 57 1 76 174 221 320 7.58e-20 86.3
MsG0180003849.01.T01 MTR_4g087140 33.636 110 71 1 76 183 221 330 7.65e-20 86.3
MsG0180003849.01.T01 MTR_8g093980 39.048 105 64 0 76 180 243 347 8.84e-20 86.3
MsG0180003849.01.T01 MTR_2g069090 39.231 130 75 2 74 199 242 371 1.02e-19 86.3
MsG0180003849.01.T01 MTR_3g117420 38.462 117 70 2 73 187 228 344 1.22e-19 85.9
MsG0180003849.01.T01 MTR_8g041600 34.884 129 80 1 74 198 244 372 2.96e-19 84.7
MsG0180003849.01.T01 MTR_1g033810 37.864 103 63 1 73 174 222 324 3.69e-19 84.3
MsG0180003849.01.T01 MTR_3g043900 34.228 149 88 3 52 190 195 343 3.95e-19 84.3
MsG0180003849.01.T01 MTR_1g093120 35.659 129 80 1 74 199 241 369 3.96e-19 84.3
MsG0180003849.01.T01 MTR_7g056347 34.783 138 84 1 68 199 235 372 4.17e-19 84.3
MsG0180003849.01.T01 MTR_0009s0480 36.283 113 71 1 73 184 219 331 5.23e-19 84.0
MsG0180003849.01.T01 MTR_4g087120 33.083 133 83 2 73 199 217 349 5.68e-19 84.0
MsG0180003849.01.T01 MTR_1g032220 37.903 124 75 2 69 190 239 362 5.81e-19 84.0
MsG0180003849.01.T01 MTR_8g009180 37.500 120 72 1 74 190 165 284 6.31e-19 82.8
MsG0180003849.01.T01 MTR_4g024660 31.884 138 88 1 68 199 235 372 6.40e-19 84.0
MsG0180003849.01.T01 MTR_2g033270 35.088 114 72 2 68 179 184 297 7.92e-19 83.2
MsG0180003849.01.T01 MTR_8g064200 35.345 116 74 1 73 187 231 346 8.37e-19 83.6
MsG0180003849.01.T01 MTR_8g064200 35.345 116 74 1 73 187 226 341 8.46e-19 83.6
MsG0180003849.01.T01 MTR_2g068840 36.000 125 73 1 68 185 222 346 8.49e-19 83.6
MsG0180003849.01.T01 MTR_8g008930 39.231 130 74 2 74 199 236 364 8.81e-19 83.6
MsG0180003849.01.T01 MTR_2g083000 37.288 118 65 2 76 190 207 318 9.22e-19 82.8
MsG0180003849.01.T01 MTR_8g009160 36.434 129 79 1 74 199 235 363 1.06e-18 83.2
MsG0180003849.01.T01 MTR_8g093930 33.628 113 75 0 76 188 232 344 1.09e-18 83.2
MsG0180003849.01.T01 MTR_4g011720 31.405 121 82 1 73 192 184 304 1.10e-18 82.4
MsG0180003849.01.T01 MTR_4g123020 35.135 111 71 1 70 179 190 300 1.37e-18 82.4
MsG0180003849.01.T01 MTR_2g069300 36.923 130 78 2 74 199 228 357 1.78e-18 82.4
MsG0180003849.01.T01 MTR_3g088745 36.792 106 67 0 76 181 223 328 1.87e-18 82.4
MsG0180003849.01.T01 MTR_5g055690 35.043 117 75 1 73 188 221 337 1.89e-18 82.4
MsG0180003849.01.T01 MTR_3g040410 31.618 136 86 2 70 205 176 304 2.30e-18 81.6
MsG0180003849.01.T01 MTR_4g093840 38.835 103 62 1 76 177 241 343 2.42e-18 82.0
MsG0180003849.01.T01 MTR_5g048470 33.607 122 80 1 73 193 227 348 2.52e-18 82.0
MsG0180003849.01.T01 MTR_2g102570 33.613 119 75 2 73 187 225 343 2.82e-18 82.0
MsG0180003849.01.T01 MTR_0056s0160 33.621 116 76 1 73 187 105 220 3.11e-18 80.1
MsG0180003849.01.T01 MTR_2g083030 35.514 107 63 1 73 179 209 309 3.16e-18 81.6
MsG0180003849.01.T01 MTR_0032s0040 39.231 130 73 3 74 198 243 371 4.55e-18 81.6
MsG0180003849.01.T01 MTR_8g074050 36.842 114 70 2 76 187 231 344 6.17e-18 80.9
MsG0180003849.01.T01 MTR_3g096500 33.065 124 81 2 76 198 253 375 7.12e-18 80.9
MsG0180003849.01.T01 MTR_5g048740 34.211 114 74 1 73 185 219 332 7.48e-18 80.9
MsG0180003849.01.T01 MTR_5g048850 37.168 113 70 1 76 187 223 335 7.99e-18 80.5
MsG0180003849.01.T01 MTR_2g069020 38.793 116 67 2 74 185 241 356 1.02e-17 80.5
MsG0180003849.01.T01 MTR_2g069020 38.793 116 67 2 74 185 241 356 1.34e-17 80.5
MsG0180003849.01.T01 MTR_4g074130 36.449 107 62 1 73 179 213 313 1.45e-17 79.7
MsG0180003849.01.T01 MTR_4g011690 30.233 129 87 3 73 198 184 312 2.17e-17 79.0
MsG0180003849.01.T01 MTR_5g059140 36.634 101 64 0 73 173 219 319 2.77e-17 79.0
MsG0180003849.01.T01 MTR_1g093110 31.538 130 85 2 74 199 244 373 3.55e-17 79.0
MsG0180003849.01.T01 MTR_1g081840 33.333 117 77 1 76 192 240 355 3.62e-17 79.0
MsG0180003849.01.T01 MTR_8g461330 35.849 106 67 1 75 179 207 312 3.85e-17 78.6
MsG0180003849.01.T01 MTR_8g063070 31.298 131 84 1 74 198 241 371 5.18e-17 78.6
MsG0180003849.01.T01 MTR_4g021380 37.500 104 63 2 76 177 192 295 6.27e-17 77.8
MsG0180003849.01.T01 MTR_4g117880 41.346 104 58 1 73 173 235 338 6.55e-17 78.2
MsG0180003849.01.T01 MTR_3g088565 37.500 104 64 1 73 175 175 278 7.63e-17 77.4
MsG0180003849.01.T01 MTR_5g055800 36.538 104 62 3 73 174 220 321 7.89e-17 77.8
MsG0180003849.01.T01 MTR_7g016100 47.368 76 40 0 120 195 5 80 8.61e-17 72.4
MsG0180003849.01.T01 MTR_6g088665 36.220 127 74 3 76 196 213 338 9.40e-17 77.4
MsG0180003849.01.T01 MTR_6g088665 36.220 127 74 3 76 196 212 337 9.81e-17 77.4
MsG0180003849.01.T01 MTR_1g043760 37.288 118 69 2 74 187 227 343 1.15e-16 77.4
MsG0180003849.01.T01 MTR_8g102600 33.858 127 77 3 76 196 151 276 1.67e-16 76.3
MsG0180003849.01.T01 MTR_1g043810 38.462 117 67 2 75 187 229 344 1.76e-16 77.0
MsG0180003849.01.T01 MTR_8g009120 36.434 129 79 1 74 199 224 352 1.88e-16 76.6
MsG0180003849.01.T01 MTR_3g108520 33.929 112 72 2 72 181 187 298 2.19e-16 76.3
MsG0180003849.01.T01 MTR_3g117485 35.294 102 65 1 76 176 159 260 2.52e-16 75.9
MsG0180003849.01.T01 MTR_8g102600 33.858 127 77 3 76 196 201 326 2.65e-16 76.3
MsG0180003849.01.T01 MTR_1g062110 37.383 107 67 0 76 182 249 355 3.05e-16 76.3
MsG0180003849.01.T01 MTR_7g090520 37.288 118 68 5 73 187 186 300 3.68e-16 75.9
MsG0180003849.01.T01 MTR_3g117485 35.294 102 65 1 76 176 231 332 4.26e-16 75.9
MsG0180003849.01.T01 MTR_1g043775 40.000 110 61 2 75 180 229 337 4.71e-16 75.9
MsG0180003849.01.T01 MTR_4g096840 33.645 107 69 2 75 179 206 312 9.76e-16 74.7
MsG0180003849.01.T01 MTR_2g070870 35.849 106 66 2 75 179 200 304 1.16e-15 74.3
MsG0180003849.01.T01 MTR_2g019370 34.906 106 68 1 75 179 207 312 1.25e-15 74.3
MsG0180003849.01.T01 MTR_8g074070 37.143 105 65 1 73 176 209 313 1.28e-15 74.3
MsG0180003849.01.T01 MTR_8g074070 38.235 102 62 1 76 176 231 332 1.59e-15 74.3
MsG0180003849.01.T01 MTR_1g027290 39.640 111 65 2 73 181 209 319 1.66e-15 73.9
MsG0180003849.01.T01 MTR_4g087130 31.061 132 85 2 73 198 216 347 3.15e-15 73.6
MsG0180003849.01.T01 MTR_3g464530 32.061 131 62 3 76 189 206 326 3.77e-15 72.8
MsG0180003849.01.T01 MTR_3g091350 34.579 107 69 1 73 179 235 340 4.88e-15 72.8
MsG0180003849.01.T01 MTR_4g115990 39.048 105 63 1 73 176 201 305 5.75e-15 72.4
MsG0180003849.01.T01 MTR_3g091360 33.945 109 71 1 73 181 228 335 6.55e-15 72.4
MsG0180003849.01.T01 MTR_8g006930 39.831 118 65 1 74 185 241 358 1.36e-14 71.6
MsG0180003849.01.T01 MTR_4g021360 32.432 111 73 2 73 181 186 296 3.75e-14 70.1
MsG0180003849.01.T01 MTR_1g043770 39.024 123 61 4 75 189 227 343 4.12e-14 70.1
MsG0180003849.01.T01 MTR_3g058610 40.659 91 52 2 73 161 215 305 4.35e-14 70.1
MsG0180003849.01.T01 MTR_4g119410 34.848 132 80 1 74 199 241 372 7.74e-14 69.3
MsG0180003849.01.T01 MTR_8g075890 30.882 136 90 3 73 205 215 349 2.24e-13 68.2
MsG0180003849.01.T01 MTR_1g048940 33.945 109 67 3 76 181 224 330 2.28e-13 68.2
MsG0180003849.01.T01 MTR_8g009150 31.624 117 77 1 86 199 228 344 2.29e-13 68.2
MsG0180003849.01.T01 MTR_8g075830 31.061 132 88 2 73 202 215 345 2.33e-13 68.2
MsG0180003849.01.T01 MTR_5g022020 38.202 89 53 1 75 161 217 305 4.04e-13 67.4
MsG0180003849.01.T01 MTR_1g011580 27.500 160 93 5 34 181 189 337 5.93e-13 67.0
MsG0180003849.01.T01 MTR_7g078010 34.848 132 80 1 74 199 241 372 6.95e-13 66.6
MsG0180003849.01.T01 MTR_5g011250 28.358 134 85 3 73 205 229 352 1.57e-12 65.5
MsG0180003849.01.T01 MTR_1g043840 47.368 76 40 0 75 150 111 186 1.74e-12 65.5
MsG0180003849.01.T01 MTR_7g056393 34.091 132 81 1 74 199 241 372 1.81e-12 65.5
MsG0180003849.01.T01 MTR_7g081710 33.636 110 71 2 73 181 224 332 2.91e-12 64.7
MsG0180003849.01.T01 MTR_6g035160 30.702 114 77 2 73 184 50 163 3.84e-12 62.4
MsG0180003849.01.T01 MTR_5g024940 28.125 128 90 2 74 199 151 278 4.34e-12 63.9
MsG0180003849.01.T01 MTR_6g092620 33.884 121 71 4 73 190 174 288 5.99e-12 63.5
MsG0180003849.01.T01 MTR_8g030880 36.735 98 61 1 76 172 187 284 6.57e-12 63.5
MsG0180003849.01.T01 MTR_7g077670 37.624 101 62 1 76 175 187 287 2.12e-11 62.4
MsG0180003849.01.T01 MTR_1g011600 30.476 105 72 1 69 172 188 292 2.18e-11 62.0
MsG0180003849.01.T01 MTR_2g068800 41.892 74 36 1 75 141 210 283 2.40e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003849.01.T01 AT4G10490 42.857 126 70 1 76 199 219 344 2.03e-30 114
MsG0180003849.01.T01 AT5G24530 40.000 130 74 2 73 198 209 338 7.81e-27 105
MsG0180003849.01.T01 AT5G05600 47.525 101 52 1 73 172 241 341 5.72e-26 103
MsG0180003849.01.T01 AT3G19010 38.760 129 69 2 59 177 162 290 1.84e-25 100
MsG0180003849.01.T01 AT3G21420 47.222 108 54 3 73 177 232 339 2.16e-25 101
MsG0180003849.01.T01 AT3G19010 40.310 129 64 3 62 177 192 320 2.66e-25 101
MsG0180003849.01.T01 AT3G19010 40.310 129 64 3 62 177 192 320 2.66e-25 101
MsG0180003849.01.T01 AT1G78550 38.889 126 70 2 73 191 150 275 4.07e-25 99.4
MsG0180003849.01.T01 AT1G78550 38.889 126 70 2 73 191 228 353 1.17e-24 99.4
MsG0180003849.01.T01 AT4G10500 35.333 150 87 3 48 187 184 333 1.65e-24 99.0
MsG0180003849.01.T01 AT1G55290 36.800 125 77 1 68 190 227 351 2.44e-23 95.9
MsG0180003849.01.T01 AT5G59530 40.496 121 69 1 73 190 234 354 6.83e-23 94.7
MsG0180003849.01.T01 AT3G11180 36.232 138 78 3 73 205 270 402 2.66e-22 93.6
MsG0180003849.01.T01 AT3G13610 38.333 120 72 1 73 190 232 351 8.75e-22 91.7
MsG0180003849.01.T01 AT2G38240 37.168 113 70 1 68 179 218 330 9.02e-22 91.7
MsG0180003849.01.T01 AT4G21200 40.741 108 58 1 73 180 212 313 1.06e-21 91.3
MsG0180003849.01.T01 AT3G11180 42.574 101 57 1 73 172 270 370 1.10e-21 92.0
MsG0180003849.01.T01 AT5G59540 42.149 121 67 1 73 190 236 356 1.75e-21 90.9
MsG0180003849.01.T01 AT5G43450 40.310 129 74 1 73 198 232 360 2.45e-21 90.5
MsG0180003849.01.T01 AT5G07200 37.500 120 72 2 76 193 246 364 6.53e-21 89.4
MsG0180003849.01.T01 AT4G25310 36.975 119 74 1 73 190 225 343 8.67e-21 89.0
MsG0180003849.01.T01 AT1G05010 46.809 94 48 2 73 164 174 267 2.55e-20 87.4
MsG0180003849.01.T01 AT3G19000 35.256 156 83 4 35 177 175 325 3.34e-20 87.4
MsG0180003849.01.T01 AT2G30830 40.164 122 68 4 73 190 228 348 3.87e-20 87.0
MsG0180003849.01.T01 AT1G12010 44.681 94 51 1 73 165 177 270 4.14e-20 86.7
MsG0180003849.01.T01 AT1G62380 46.809 94 49 1 73 165 177 270 4.23e-20 86.7
MsG0180003849.01.T01 AT4G16330 37.500 120 71 1 68 187 130 245 4.60e-20 85.5
MsG0180003849.01.T01 AT3G55970 38.655 119 70 3 73 189 232 349 4.69e-20 87.0
MsG0180003849.01.T01 AT2G36690 41.237 97 57 0 76 172 239 335 5.53e-20 86.7
MsG0180003849.01.T01 AT2G36690 41.237 97 57 0 76 172 239 335 5.53e-20 86.7
MsG0180003849.01.T01 AT1G04380 37.209 129 78 1 74 199 216 344 7.82e-20 86.3
MsG0180003849.01.T01 AT1G06620 38.333 120 70 2 73 189 235 353 9.14e-20 86.3
MsG0180003849.01.T01 AT1G30040 34.058 138 89 2 60 195 191 328 9.58e-20 85.9
MsG0180003849.01.T01 AT1G15550 37.273 110 68 1 73 181 229 338 1.20e-19 85.9
MsG0180003849.01.T01 AT4G16330 37.500 120 71 1 68 187 236 351 1.31e-19 85.9
MsG0180003849.01.T01 AT1G17020 38.655 119 72 1 73 190 230 348 1.33e-19 85.9
MsG0180003849.01.T01 AT4G25310 36.364 110 70 0 81 190 206 315 1.54e-19 85.1
MsG0180003849.01.T01 AT5G20400 36.752 117 72 2 73 187 222 338 1.81e-19 85.1
MsG0180003849.01.T01 AT1G60980 38.136 118 69 1 76 193 247 360 2.00e-19 85.5
MsG0180003849.01.T01 AT4G25300 35.294 119 76 1 73 190 228 346 2.24e-19 85.1
MsG0180003849.01.T01 AT1G78440 37.736 106 65 1 75 179 196 301 2.60e-19 84.7
MsG0180003849.01.T01 AT4G25300 35.294 119 76 1 73 190 134 252 2.72e-19 83.6
MsG0180003849.01.T01 AT5G51810 34.746 118 76 1 76 193 245 361 5.74e-19 84.0
MsG0180003849.01.T01 AT5G43440 42.857 105 55 2 73 173 235 338 6.39e-19 84.0
MsG0180003849.01.T01 AT3G12900 34.677 124 80 1 68 190 223 346 7.63e-19 83.6
MsG0180003849.01.T01 AT1G80340 35.455 110 70 1 73 181 222 331 8.33e-19 83.2
MsG0180003849.01.T01 AT4G25420 34.746 118 76 1 76 193 247 363 8.39e-19 83.6
MsG0180003849.01.T01 AT1G47990 34.513 113 72 2 75 185 192 304 2.25e-18 82.0
MsG0180003849.01.T01 AT1G03400 40.984 122 68 2 73 190 221 342 2.66e-18 82.0
MsG0180003849.01.T01 AT1G06640 38.655 119 67 3 74 187 239 356 2.91e-18 82.0
MsG0180003849.01.T01 AT1G17010 34.454 119 77 1 71 188 228 346 5.25e-18 81.3
MsG0180003849.01.T01 AT1G04350 38.281 128 75 2 76 199 232 359 5.99e-18 81.3
MsG0180003849.01.T01 AT1G06645 37.500 120 70 3 74 189 249 367 7.18e-18 80.9
MsG0180003849.01.T01 AT1G80330 35.135 111 70 2 73 181 224 334 8.27e-18 80.5
MsG0180003849.01.T01 AT1G03410 39.316 117 65 3 73 184 231 346 8.37e-18 80.9
MsG0180003849.01.T01 AT1G49390 36.752 117 72 2 73 187 143 259 1.25e-17 79.0
MsG0180003849.01.T01 AT1G03410 39.316 117 65 3 73 184 268 383 1.28e-17 80.5
MsG0180003849.01.T01 AT2G34555 33.333 144 85 4 62 203 195 329 1.43e-17 79.7
MsG0180003849.01.T01 AT1G49390 36.752 117 72 2 73 187 222 338 1.70e-17 79.7
MsG0180003849.01.T01 AT3G61400 33.333 129 81 3 73 196 239 367 3.04e-17 79.3
MsG0180003849.01.T01 AT1G02400 28.481 158 96 4 39 179 151 308 3.70e-17 78.6
MsG0180003849.01.T01 AT1G06650 37.705 122 70 3 74 190 239 359 3.95e-17 79.0
MsG0180003849.01.T01 AT5G63600 34.906 106 69 0 76 181 205 310 1.16e-16 77.0
MsG0180003849.01.T01 AT5G08640 31.304 115 79 0 73 187 218 332 1.24e-16 77.4
MsG0180003849.01.T01 AT5G08640 31.304 115 79 0 73 187 218 332 1.24e-16 77.4
MsG0180003849.01.T01 AT2G30840 33.333 117 75 2 74 187 233 349 1.53e-16 77.0
MsG0180003849.01.T01 AT3G46500 35.345 116 69 2 76 186 64 178 2.05e-16 74.3
MsG0180003849.01.T01 AT5G54000 36.190 105 66 1 76 179 146 250 3.23e-16 75.1
MsG0180003849.01.T01 AT3G46500 35.345 116 69 2 76 186 126 240 4.62e-16 74.7
MsG0180003849.01.T01 AT3G46500 35.345 116 69 2 76 186 126 240 4.62e-16 74.7
MsG0180003849.01.T01 AT5G54000 36.190 105 66 1 76 179 226 330 5.62e-16 75.5
MsG0180003849.01.T01 AT3G46500 35.345 116 69 2 76 186 200 314 8.38e-16 74.7
MsG0180003849.01.T01 AT5G63600 34.579 107 69 1 76 181 205 311 9.32e-16 74.7
MsG0180003849.01.T01 AT5G20550 35.345 116 72 3 73 185 222 337 9.56e-16 74.7
MsG0180003849.01.T01 AT1G77330 42.697 89 50 1 73 160 177 265 1.08e-15 74.3
MsG0180003849.01.T01 AT2G25450 37.736 106 59 3 74 173 229 333 1.68e-15 74.3
MsG0180003849.01.T01 AT5G12270 36.434 129 76 4 75 197 228 356 2.43e-15 73.9
MsG0180003849.01.T01 AT1G44090 36.559 93 59 0 73 165 246 338 3.48e-15 73.6
MsG0180003849.01.T01 AT3G46480 33.871 124 75 3 76 193 160 282 3.73e-15 72.4
MsG0180003849.01.T01 AT4G21690 31.579 152 78 5 46 182 194 334 4.16e-15 73.2
MsG0180003849.01.T01 AT1G50960 32.432 111 61 2 73 179 213 313 6.75e-15 72.4
MsG0180003849.01.T01 AT4G23340 34.579 107 69 1 76 181 68 174 1.72e-14 69.7
MsG0180003849.01.T01 AT1G52820 28.906 128 89 2 73 198 187 314 4.27e-14 70.1
MsG0180003849.01.T01 AT4G23340 34.579 107 69 1 76 181 186 292 9.22e-14 68.9
MsG0180003849.01.T01 AT1G52800 30.952 126 83 3 75 198 188 311 1.01e-13 68.9
MsG0180003849.01.T01 AT4G03070 30.508 118 81 1 73 189 192 309 1.16e-13 68.9
MsG0180003849.01.T01 AT4G22870 34.177 79 51 1 92 169 4 82 1.32e-13 65.1
MsG0180003849.01.T01 AT3G46500 35.577 104 61 2 88 186 114 216 1.35e-13 67.4
MsG0180003849.01.T01 AT3G50210 44.186 86 46 2 76 159 128 213 1.39e-13 67.8
MsG0180003849.01.T01 AT3G51240 35.165 91 57 1 73 161 130 220 1.99e-13 67.8
MsG0180003849.01.T01 AT3G50210 44.186 86 46 2 76 159 210 295 2.41e-13 67.8
MsG0180003849.01.T01 AT3G50210 44.186 86 46 2 76 159 210 295 2.41e-13 67.8
MsG0180003849.01.T01 AT3G50210 44.186 86 46 2 76 159 210 295 2.41e-13 67.8
MsG0180003849.01.T01 AT5G43935 29.630 108 76 0 76 183 178 285 2.53e-13 67.4
MsG0180003849.01.T01 AT3G47190 30.275 109 65 2 73 180 209 307 2.78e-13 67.8
MsG0180003849.01.T01 AT1G80320 30.000 120 80 3 70 188 184 300 3.83e-13 67.4
MsG0180003849.01.T01 AT2G19590 37.234 94 57 2 73 164 164 257 3.88e-13 67.0
MsG0180003849.01.T01 AT2G19590 37.234 94 57 2 73 164 179 272 4.13e-13 67.0
MsG0180003849.01.T01 AT3G51240 35.165 91 57 1 73 161 214 304 5.10e-13 67.0
MsG0180003849.01.T01 AT2G30840 31.624 117 71 3 74 187 233 343 5.22e-13 67.0
MsG0180003849.01.T01 AT4G22880 29.592 98 68 1 73 169 229 326 6.03e-13 67.0
MsG0180003849.01.T01 AT4G22880 29.592 98 68 1 73 169 229 326 6.03e-13 67.0
MsG0180003849.01.T01 AT4G22880 29.592 98 68 1 73 169 229 326 6.03e-13 67.0
MsG0180003849.01.T01 AT5G63590 34.862 109 70 1 76 183 192 300 9.84e-13 65.9
MsG0180003849.01.T01 AT3G46490 31.897 116 73 2 76 186 207 321 1.01e-12 66.2
MsG0180003849.01.T01 AT5G58660 31.395 86 58 1 76 160 229 314 6.52e-12 63.9
MsG0180003849.01.T01 AT3G49630 38.372 86 51 1 76 159 133 218 1.59e-11 62.0
MsG0180003849.01.T01 AT3G49630 38.372 86 51 1 76 159 206 291 2.94e-11 62.0
MsG0180003849.01.T01 AT3G49630 38.372 86 51 1 76 159 202 287 3.19e-11 62.0
MsG0180003849.01.T01 AT1G28030 32.727 110 70 4 76 181 192 301 3.24e-11 61.6
MsG0180003849.01.T01 AT3G49620 37.500 96 57 3 76 169 231 325 4.79e-11 61.2
MsG0180003849.01.T01 AT1G14130 31.683 101 66 2 76 173 176 276 5.08e-11 61.2
MsG0180003849.01.T01 AT4G22870 32.877 73 48 1 98 169 51 123 6.99e-11 58.5

Find 54 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTCCCTGGTCTTGTTTC+TGG 0.072157 1:+69174479 None:intergenic
TGAGGAGTTTGGATTCTTTC+AGG 0.155309 1:-69174360 MsG0180003849.01.T01:intron
GCTTCACTAAGATCAATTAT+TGG 0.244375 1:+69174431 None:intergenic
GATCTTAGTGAAGCACAAAA+TGG 0.276737 1:-69174422 MsG0180003849.01.T01:CDS
CAATATTTCCTTTAATCCTT+TGG 0.303804 1:+69169983 None:intergenic
TATTTGTAAGACTTATAAAT+AGG 0.308392 1:+69170082 None:intergenic
AAGAGGAACCAAAGGATTAA+AGG 0.321991 1:-69169991 MsG0180003849.01.T01:exon
GATAATTTGCTGAATTGATT+TGG 0.327263 1:+69174391 None:intergenic
CTTCACTAAGATCAATTATT+GGG 0.330210 1:+69174432 None:intergenic
ATCAAGGCTGCTGAGGAGTT+TGG 0.334114 1:-69174371 MsG0180003849.01.T01:CDS
AAGCTACTTCAAAGGGGATA+TGG 0.340676 1:-69174561 MsG0180003849.01.T01:exon
CTTTGGTTCCTCTTCCTCAT+AGG 0.343440 1:+69170000 None:intergenic
CAACATAGGCTACGCCTTGC+AGG 0.351085 1:-69170494 MsG0180003849.01.T01:intron
CATAATCAAGCTACTTCAAA+GGG 0.407105 1:-69174568 MsG0180003849.01.T01:five_prime_UTR
TGGATACAGATAATCACTAA+TGG 0.413308 1:-69170238 MsG0180003849.01.T01:intron
TTCCCTGGTCTTGTTTCTGG+TGG 0.413720 1:+69174482 None:intergenic
AAGAAAATTTCATTTACAAA+AGG 0.420518 1:-69169839 MsG0180003849.01.T01:three_prime_UTR
ATGTGGGCTTCAAGTACTTA+AGG 0.423375 1:-69170563 MsG0180003849.01.T01:CDS
ATCTTAGTGAAGCACAAAAT+GGG 0.425621 1:-69174421 MsG0180003849.01.T01:CDS
AATTGATGATTTAATGCTGT+TGG 0.425909 1:-69169914 MsG0180003849.01.T01:three_prime_UTR
GAGGTAAGCATCAAAGTGTT+TGG 0.427989 1:+69170612 None:intergenic
GAAACATGGTGACATGGATA+TGG 0.428427 1:-69170032 MsG0180003849.01.T01:CDS
CATGCATTTGTTATCAACAT+AGG 0.450686 1:-69170508 MsG0180003849.01.T01:CDS
TGGAGAAATTTATTTCAAAC+CGG 0.451168 1:-69174541 MsG0180003849.01.T01:CDS
TATATCTTCTTGTTGTAAAA+CGG 0.454560 1:+69170585 None:intergenic
TCCCTGGTCTTGTTTCTGGT+GGG 0.472772 1:+69174483 None:intergenic
GCACAGATTTGATGCTTGAC+CGG 0.497913 1:+69174522 None:intergenic
ATCAATTCAGCAAATTATCA+AGG 0.500951 1:-69174387 MsG0180003849.01.T01:CDS
ACTAAGATCAATTATTGGGA+TGG 0.512445 1:+69174436 None:intergenic
GCATAATCAAGCTACTTCAA+AGG 0.524894 1:-69174569 MsG0180003849.01.T01:five_prime_UTR
TTATAAGTCTTACAAATACA+AGG 0.534373 1:-69170077 MsG0180003849.01.T01:CDS
GCTGAAATCCTATGAGGAAG+AGG 0.542824 1:-69170008 MsG0180003849.01.T01:CDS
TTACAACAAGAAGATATATG+TGG 0.543713 1:-69170580 MsG0180003849.01.T01:CDS
ATTAAAGGAAATATTGTGAA+AGG 0.551119 1:-69169976 MsG0180003849.01.T01:exon
TACAACAAGAAGATATATGT+GGG 0.557261 1:-69170579 MsG0180003849.01.T01:CDS
TTGTAAGACTTATAAATAGG+TGG 0.558068 1:+69170085 None:intergenic
GGTGGGAATACATAGTCCTC+AGG 0.561221 1:+69174500 None:intergenic
CTTTAAGAAACATGGTGACA+TGG 0.566858 1:-69170038 MsG0180003849.01.T01:CDS
TTCCCACCAGAAACAAGACC+AGG 0.575281 1:-69174485 MsG0180003849.01.T01:CDS
TCAATGAAACAATCACCTGA+TGG 0.600025 1:+69170139 None:intergenic
ACTTATAAATAGGTGGATTG+TGG 0.604525 1:+69170092 None:intergenic
ACTCGCTTCTTTAAGAAACA+TGG 0.604783 1:-69170046 MsG0180003849.01.T01:CDS
CTATGAGGAAGAGGAACCAA+AGG 0.608822 1:-69169999 MsG0180003849.01.T01:CDS
CTTGTTGTAAAACGGTGATG+AGG 0.608895 1:+69170593 None:intergenic
GCAAATTATCAAGGCTGCTG+AGG 0.609624 1:-69174378 MsG0180003849.01.T01:CDS
AAGCATCAAATCTGTGCCTG+AGG 0.610221 1:-69174516 MsG0180003849.01.T01:CDS
GGGCTTCAAGTACTTAAGGA+TGG 0.612431 1:-69170559 MsG0180003849.01.T01:CDS
AAGTACTTAAGGATGGAGAG+TGG 0.626132 1:-69170552 MsG0180003849.01.T01:CDS
ATGCATTAAGTGTACCTGCA+AGG 0.639467 1:+69170480 None:intergenic
TCTTAGTGAAGCACAAAATG+GGG 0.639942 1:-69174420 MsG0180003849.01.T01:CDS
TATGGTGCTGAAATCCTATG+AGG 0.655229 1:-69170014 MsG0180003849.01.T01:CDS
ATGTTGATAACAAATGCATG+AGG 0.686842 1:+69170511 None:intergenic
ATAATCAAGCTACTTCAAAG+GGG 0.725478 1:-69174567 MsG0180003849.01.T01:five_prime_UTR
TCCCACCAGAAACAAGACCA+GGG 0.729981 1:-69174484 MsG0180003849.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAAATAAATA+AGG + Chr1:69174533-69174552 None:intergenic 0.0%
!! AAATATATATATTTATTGGA+TGG + Chr1:69173595-69173614 None:intergenic 10.0%
!! GTTTATATATATTTATTAGT+TGG - Chr1:69171421-69171440 MsG0180003849.01.T01:intron 10.0%
!! TCAATGAATATAAAAAATAA+AGG - Chr1:69171949-69171968 MsG0180003849.01.T01:intron 10.0%
!! TTAAATTAAAACTAACAAAA+AGG + Chr1:69170229-69170248 None:intergenic 10.0%
!! TTTAATTCTTTAAATTATGT+GGG - Chr1:69173981-69174000 MsG0180003849.01.T01:intron 10.0%
!!! AAAAATTAAGCATATTTTTA+AGG + Chr1:69171386-69171405 None:intergenic 10.0%
!!! ATTTTAATAAAAAAAATGTC+GGG + Chr1:69171542-69171561 None:intergenic 10.0%
!!! ATTTTCATTAAAAAATATGA+AGG - Chr1:69173444-69173463 MsG0180003849.01.T01:intron 10.0%
!!! GACATTTTTTTTATTAAAAT+AGG - Chr1:69171542-69171561 MsG0180003849.01.T01:intron 10.0%
!!! GTCAAAATTTTTTTTTATTT+TGG + Chr1:69172616-69172635 None:intergenic 10.0%
!!! TTTTAATTCTTTAAATTATG+TGG - Chr1:69173980-69173999 MsG0180003849.01.T01:intron 10.0%
!! AAGAAAATTTCATTTACAAA+AGG - Chr1:69174579-69174598 MsG0180003849.01.T01:five_prime_UTR 15.0%
!! AATTTCATTTACAAATATGA+AGG + Chr1:69173427-69173446 None:intergenic 15.0%
!! GATACTAATTAAATAGTTAA+GGG - Chr1:69170458-69170477 MsG0180003849.01.T01:intron 15.0%
!! TATTTGTAAGACTTATAAAT+AGG + Chr1:69174339-69174358 None:intergenic 15.0%
!! TTCAAATATTGAATTTGATA+AGG - Chr1:69171705-69171724 MsG0180003849.01.T01:intron 15.0%
!!! AAATTTCACACTTATTTTTT+AGG + Chr1:69171328-69171347 None:intergenic 15.0%
!!! AATATGTGAAGATTTTTATA+TGG + Chr1:69172934-69172953 None:intergenic 15.0%
!!! AATTTCACACTTATTTTTTA+GGG + Chr1:69171327-69171346 None:intergenic 15.0%
!!! ACTTTTAATATATGTTGAAT+TGG + Chr1:69171858-69171877 None:intergenic 15.0%
!!! AGTTTTAATTCAAAAACATT+AGG + Chr1:69170360-69170379 None:intergenic 15.0%
!!! ATGTATTTAAAAATTTGTTG+AGG + Chr1:69173239-69173258 None:intergenic 15.0%
!!! ATTATAAATTGATGATAGAT+TGG + Chr1:69171110-69171129 None:intergenic 15.0%
!!! TAAAAAATTTCTTCAACTTT+TGG - Chr1:69173342-69173361 MsG0180003849.01.T01:intron 15.0%
!!! TGTATTTAAAAATTTGTTGA+GGG + Chr1:69173238-69173257 None:intergenic 15.0%
!!! TGTTTTTGAATTAAAACTAA+CGG - Chr1:69170362-69170381 MsG0180003849.01.T01:intron 15.0%
!!! TTGTTTTACTAAATTTTTGA+TGG - Chr1:69173541-69173560 MsG0180003849.01.T01:intron 15.0%
!!! TTTTGTAAATGAAATTTTCT+TGG + Chr1:69174580-69174599 None:intergenic 15.0%
!! AAAGAAAAAGGAAAAAAAGA+GGG - Chr1:69173007-69173026 MsG0180003849.01.T01:intron 20.0%
!! AACTGATAAATATTCTATGA+TGG + Chr1:69170962-69170981 None:intergenic 20.0%
!! AAGCTTATACTTATCTTAAT+GGG + Chr1:69173118-69173137 None:intergenic 20.0%
!! ATTAAAGGAAATATTGTGAA+AGG - Chr1:69174442-69174461 MsG0180003849.01.T01:CDS 20.0%
!! ATTGAAATATTAATAACCCT+AGG - Chr1:69174043-69174062 MsG0180003849.01.T01:intron 20.0%
!! ATTTAACCATAGCATAATAT+TGG + Chr1:69173276-69173295 None:intergenic 20.0%
!! CGATACTAATTAAATAGTTA+AGG - Chr1:69170457-69170476 MsG0180003849.01.T01:intron 20.0%
!! CTCTTATTAATTGTGTAAAT+TGG - Chr1:69174124-69174143 MsG0180003849.01.T01:intron 20.0%
!! GGATTATTCAACTAAAATTA+AGG - Chr1:69173637-69173656 MsG0180003849.01.T01:intron 20.0%
!! TGTTTATAATAGTGATTGAA+CGG - Chr1:69171974-69171993 MsG0180003849.01.T01:intron 20.0%
!! TTAAAATAGGTTATCAATCA+TGG - Chr1:69171555-69171574 MsG0180003849.01.T01:intron 20.0%
!! TTATAAGTCTTACAAATACA+AGG - Chr1:69174341-69174360 MsG0180003849.01.T01:intron 20.0%
!! TTGAAATATTAATAACCCTA+GGG - Chr1:69174044-69174063 MsG0180003849.01.T01:intron 20.0%
!! TTTAAGAGAGATGTAAAAAA+AGG - Chr1:69172183-69172202 MsG0180003849.01.T01:intron 20.0%
!!! AAAATTTCCATTACCATTTT+TGG - Chr1:69173372-69173391 MsG0180003849.01.T01:intron 20.0%
!!! AAATGGTAATGGAAATTTTT+AGG + Chr1:69173371-69173390 None:intergenic 20.0%
!!! AACACACTCTTATTTATTTT+AGG + Chr1:69172738-69172757 None:intergenic 20.0%
!!! AAGATTTTTATATGGTCTAT+CGG + Chr1:69172926-69172945 None:intergenic 20.0%
!!! AAGTTGAAGAAATTTTTTAG+AGG + Chr1:69173341-69173360 None:intergenic 20.0%
!!! ACACACTCTTATTTATTTTA+GGG + Chr1:69172737-69172756 None:intergenic 20.0%
!!! ACCTCTAAAAAGAAAAATTT+GGG + Chr1:69171355-69171374 None:intergenic 20.0%
!!! AGGTTTTCTTTATTTTCTTT+TGG + Chr1:69170340-69170359 None:intergenic 20.0%
!!! AGTTGAAGAAATTTTTTAGA+GGG + Chr1:69173340-69173359 None:intergenic 20.0%
!!! ATGGATTATAATAGATTGAT+GGG - Chr1:69173560-69173579 MsG0180003849.01.T01:intron 20.0%
!!! CAATGTAAATATACTACTTT+TGG + Chr1:69172433-69172452 None:intergenic 20.0%
!!! CTATTTAATTAGTATCGTTT+TGG + Chr1:69170454-69170473 None:intergenic 20.0%
!!! TAAAATAAATAAGAGTGTGT+TGG - Chr1:69172737-69172756 MsG0180003849.01.T01:intron 20.0%
!!! TATATCTTCTTGTTGTAAAA+CGG + Chr1:69173836-69173855 None:intergenic 20.0%
!!! TCCTATTATTTTTCCAAAAT+GGG + Chr1:69172103-69172122 None:intergenic 20.0%
!!! TTAGCAAGACTTTATTTTAT+GGG + Chr1:69172542-69172561 None:intergenic 20.0%
!!! TTCCTATTATTTTTCCAAAA+TGG + Chr1:69172104-69172123 None:intergenic 20.0%
!!! TTTACTTTGACTTAAACTTT+GGG - Chr1:69171144-69171163 MsG0180003849.01.T01:intron 20.0%
!!! TTTTACTTTGACTTAAACTT+TGG - Chr1:69171143-69171162 MsG0180003849.01.T01:intron 20.0%
!!! TTTTCTTTTGGAATTTTTCT+TGG + Chr1:69170328-69170347 None:intergenic 20.0%
!!! TTTTTTTACATCTCTCTTAA+AGG + Chr1:69172184-69172203 None:intergenic 20.0%
! AAAGTTACAATTCTTCACTT+TGG - Chr1:69172642-69172661 MsG0180003849.01.T01:intron 25.0%
! ACCTAGTATATGAAAGAAAA+AGG - Chr1:69172995-69173014 MsG0180003849.01.T01:intron 25.0%
! AGAGACAAAAATTTCTCAAA+AGG - Chr1:69172804-69172823 MsG0180003849.01.T01:intron 25.0%
! AGCTTATACTTATCTTAATG+GGG + Chr1:69173117-69173136 None:intergenic 25.0%
! ATCAATTCAGCAAATTATCA+AGG - Chr1:69170031-69170050 MsG0180003849.01.T01:CDS 25.0%
! ATCATGAATTTGATTAGTGA+AGG - Chr1:69173674-69173693 MsG0180003849.01.T01:intron 25.0%
! ATGTTCTCAAATCTACAAAA+TGG + Chr1:69174025-69174044 None:intergenic 25.0%
! ATTTACTGATCTAACTAATC+AGG + Chr1:69173082-69173101 None:intergenic 25.0%
! ATTTGATAAGGTTTCATCTA+TGG - Chr1:69171717-69171736 MsG0180003849.01.T01:intron 25.0%
! CAAGCTTATACTTATCTTAA+TGG + Chr1:69173119-69173138 None:intergenic 25.0%
! CAATATTTCCTTTAATCCTT+TGG + Chr1:69174438-69174457 None:intergenic 25.0%
! CTTCACTAAGATCAATTATT+GGG + Chr1:69169989-69170008 None:intergenic 25.0%
! GAAAGAAAAAGGAAAAAAAG+AGG - Chr1:69173006-69173025 MsG0180003849.01.T01:intron 25.0%
! TAAATATACTAAGCAACACA+GGG - Chr1:69170502-69170521 MsG0180003849.01.T01:CDS 25.0%
! TACAACAAGAAGATATATGT+GGG - Chr1:69173839-69173858 MsG0180003849.01.T01:intron 25.0%
! TCAAAACAAAATACCTTGAA+TGG + Chr1:69171085-69171104 None:intergenic 25.0%
! TCAACTAAAATTAAGGAGTT+GGG - Chr1:69173644-69173663 MsG0180003849.01.T01:intron 25.0%
! TCATGAATTTGATTAGTGAA+GGG - Chr1:69173675-69173694 MsG0180003849.01.T01:intron 25.0%
! TGATAATCTTAGTGATTCAT+TGG - Chr1:69173727-69173746 MsG0180003849.01.T01:intron 25.0%
! TGGAAAAAAAATGTAAGATG+TGG + Chr1:69170942-69170961 None:intergenic 25.0%
! TGGAGAAATTTATTTCAAAC+CGG - Chr1:69169877-69169896 MsG0180003849.01.T01:three_prime_UTR 25.0%
! TTACAACAAGAAGATATATG+TGG - Chr1:69173838-69173857 MsG0180003849.01.T01:intron 25.0%
! TTCAACTAAAATTAAGGAGT+TGG - Chr1:69173643-69173662 MsG0180003849.01.T01:intron 25.0%
! TTGAATTAAAACTAACGGAA+AGG - Chr1:69170367-69170386 MsG0180003849.01.T01:intron 25.0%
! TTGTAAGACTTATAAATAGG+TGG + Chr1:69174336-69174355 None:intergenic 25.0%
! TTTACTGATCTAACTAATCA+GGG + Chr1:69173081-69173100 None:intergenic 25.0%
!! AAAAGTAGCAAATTTTGCAT+TGG - Chr1:69172247-69172266 MsG0180003849.01.T01:intron 25.0%
!! AAAGGTCTTATATTTAGTGA+CGG - Chr1:69172822-69172841 MsG0180003849.01.T01:intron 25.0%
!! AATTGATGATTTAATGCTGT+TGG - Chr1:69174504-69174523 MsG0180003849.01.T01:CDS 25.0%
!! AGATTTTTATATGGTCTATC+GGG + Chr1:69172925-69172944 None:intergenic 25.0%
!! CCTCTAAAAAGAAAAATTTG+GGG + Chr1:69171354-69171373 None:intergenic 25.0%
!! CTTTTCTATTGTCTCTAAAT+AGG + Chr1:69170848-69170867 None:intergenic 25.0%
!! GAAAACATTGATTATACTTG+AGG - Chr1:69171828-69171847 MsG0180003849.01.T01:intron 25.0%
!! GACCTCTAAAAAGAAAAATT+TGG + Chr1:69171356-69171375 None:intergenic 25.0%
!! TATAGGCTAAATTGCATTTT+TGG - Chr1:69170142-69170161 MsG0180003849.01.T01:CDS 25.0%
!! TATATTTTCCCGCTAAATAT+AGG - Chr1:69170125-69170144 MsG0180003849.01.T01:CDS 25.0%
!! TCCTTTTTCTTTCATATACT+AGG + Chr1:69172999-69173018 None:intergenic 25.0%
!! TTAGGGCTAAATTATGTTTT+TGG + Chr1:69170485-69170504 None:intergenic 25.0%
!!! GATAATTTGCTGAATTGATT+TGG + Chr1:69170030-69170049 None:intergenic 25.0%
!!! GATGGATTATAATAGATTGA+TGG - Chr1:69173559-69173578 MsG0180003849.01.T01:intron 25.0%
!!! GTCTCTTTTTAAGATCATTT+TGG + Chr1:69172790-69172809 None:intergenic 25.0%
!!! GTTAGCAAGACTTTATTTTA+TGG + Chr1:69172543-69172562 None:intergenic 25.0%
!!! TGTGTTGCTTAGTATATTTA+GGG + Chr1:69170502-69170521 None:intergenic 25.0%
AAAAAGGACCAAAATGTGTA+AGG + Chr1:69170213-69170232 None:intergenic 30.0%
AAAGTGATGCTTGTTTGAAA+TGG - Chr1:69173501-69173520 MsG0180003849.01.T01:intron 30.0%
AATGTTTAAACAATGCCCTT+AGG + Chr1:69172226-69172245 None:intergenic 30.0%
ACATGATATCTGTAGTTTCA+AGG + Chr1:69171037-69171056 None:intergenic 30.0%
ACTAAGATCAATTATTGGGA+TGG + Chr1:69169985-69170004 None:intergenic 30.0%
AGACCACTAAAATCTCAAAA+CGG - Chr1:69171467-69171486 MsG0180003849.01.T01:intron 30.0%
AGCAAGACCCATAAAATAAA+GGG - Chr1:69172368-69172387 MsG0180003849.01.T01:intron 30.0%
ATAATCAAGCTACTTCAAAG+GGG - Chr1:69169851-69169870 MsG0180003849.01.T01:three_prime_UTR 30.0%
ATAGTGAAAAATTAGTCCCT+AGG + Chr1:69174063-69174082 None:intergenic 30.0%
ATCTTAGTGAAGCACAAAAT+GGG - Chr1:69169997-69170016 MsG0180003849.01.T01:CDS 30.0%
ATGATATGAAGATGAAGAAG+AGG + Chr1:69170279-69170298 None:intergenic 30.0%
ATGTTTAAACAATGCCCTTA+GGG + Chr1:69172225-69172244 None:intergenic 30.0%
ATTGCTAGTATTAATCAGAG+AGG + Chr1:69171926-69171945 None:intergenic 30.0%
CAATTTAGCCTATATTTAGC+GGG + Chr1:69170136-69170155 None:intergenic 30.0%
CAATTTGAAAGACATGTAAG+AGG - Chr1:69171670-69171689 MsG0180003849.01.T01:intron 30.0%
CAGTTTCCAATATTATGCTA+TGG - Chr1:69173267-69173286 MsG0180003849.01.T01:intron 30.0%
CATAATCAAGCTACTTCAAA+GGG - Chr1:69169850-69169869 MsG0180003849.01.T01:three_prime_UTR 30.0%
CCTTGAATGGAAATTAAATC+TGG + Chr1:69171072-69171091 None:intergenic 30.0%
CGGAGTATATTAGTTAGTTA+CGG - Chr1:69171994-69172013 MsG0180003849.01.T01:intron 30.0%
CTAAATATACTAAGCAACAC+AGG - Chr1:69170501-69170520 MsG0180003849.01.T01:CDS 30.0%
GCAATTTAGCCTATATTTAG+CGG + Chr1:69170137-69170156 None:intergenic 30.0%
GCTTCACTAAGATCAATTAT+TGG + Chr1:69169990-69170009 None:intergenic 30.0%
GGAGTATATTAGTTAGTTAC+GGG - Chr1:69171995-69172014 MsG0180003849.01.T01:intron 30.0%
GGTTATACAAGTGTTAAACT+TGG + Chr1:69173788-69173807 None:intergenic 30.0%
TAATGGAAAGCTAAAAAGTG+TGG - Chr1:69174197-69174216 MsG0180003849.01.T01:intron 30.0%
TAGCAAGACCCATAAAATAA+AGG - Chr1:69172367-69172386 MsG0180003849.01.T01:intron 30.0%
TAGTGAAAAATTAGTCCCTA+GGG + Chr1:69174062-69174081 None:intergenic 30.0%
TATACTAGGTCTCAAACAAT+TGG + Chr1:69172985-69173004 None:intergenic 30.0%
TATATTAGTTAGTTACGGGA+CGG - Chr1:69171999-69172018 MsG0180003849.01.T01:intron 30.0%
TGGATACAGATAATCACTAA+TGG - Chr1:69174180-69174199 MsG0180003849.01.T01:intron 30.0%
TTAAAGGTAGTGACCAAAAA+TGG + Chr1:69173388-69173407 None:intergenic 30.0%
TTACTGATCTAACTAATCAG+GGG + Chr1:69173080-69173099 None:intergenic 30.0%
! AAATTTTGAACCCTGATCTA+GGG + Chr1:69170539-69170558 None:intergenic 30.0%
! CAAGACATAATTCCTTTTGT+GGG - Chr1:69172314-69172333 MsG0180003849.01.T01:intron 30.0%
! CCAGATTTAATTTCCATTCA+AGG - Chr1:69171069-69171088 MsG0180003849.01.T01:intron 30.0%
! CCCCAAATTTTTCTTTTTAG+AGG - Chr1:69171351-69171370 MsG0180003849.01.T01:intron 30.0%
! TCAAGACATAATTCCTTTTG+TGG - Chr1:69172313-69172332 MsG0180003849.01.T01:intron 30.0%
! TCATCAATGAGATCTTTTGT+TGG + Chr1:69174306-69174325 None:intergenic 30.0%
! TTACACAAGAGTTGACTTAA+AGG + Chr1:69173404-69173423 None:intergenic 30.0%
! TTTTTCACTATCTCACATGA+AGG - Chr1:69174072-69174091 MsG0180003849.01.T01:intron 30.0%
!! AAAAGTGTCTTACACATTCA+TGG - Chr1:69170805-69170824 MsG0180003849.01.T01:intron 30.0%
!! AACAATGAGTGTTTTTAAGG+AGG - Chr1:69171601-69171620 MsG0180003849.01.T01:intron 30.0%
!! ACTTATAAATAGGTGGATTG+TGG + Chr1:69174329-69174348 None:intergenic 30.0%
!! ATGGTGGATAATGATTAAGT+TGG + Chr1:69173757-69173776 None:intergenic 30.0%
!! ATGTTGATAACAAATGCATG+AGG + Chr1:69173910-69173929 None:intergenic 30.0%
!! CATGCATTTGTTATCAACAT+AGG - Chr1:69173910-69173929 MsG0180003849.01.T01:intron 30.0%
!! CTGTGTTGCTTAGTATATTT+AGG + Chr1:69170503-69170522 None:intergenic 30.0%
!! GCCCATTTTGGAAAAATAAT+AGG - Chr1:69172099-69172118 MsG0180003849.01.T01:intron 30.0%
!! GGAAACAATGAGTGTTTTTA+AGG - Chr1:69171598-69171617 MsG0180003849.01.T01:intron 30.0%
!!! AACTTTTGTTGACTTGTGAT+GGG - Chr1:69174148-69174167 MsG0180003849.01.T01:intron 30.0%
!!! AGCAAGACCCTTTATTTTAT+GGG + Chr1:69172378-69172397 None:intergenic 30.0%
!!! TAGCAAGACCCTTTATTTTA+TGG + Chr1:69172379-69172398 None:intergenic 30.0%
!!! TTTTGAGATTTTAGTGGTCT+GGG + Chr1:69171467-69171486 None:intergenic 30.0%
AAATTAAGGAGTTGGGTTCA+AGG - Chr1:69173651-69173670 MsG0180003849.01.T01:intron 35.0%
AAGAGGAACCAAAGGATTAA+AGG - Chr1:69174427-69174446 MsG0180003849.01.T01:CDS 35.0%
AAGTCGTGCTTGTATTCATT+AGG + Chr1:69171638-69171657 None:intergenic 35.0%
AATTTGATTAGTGAAGGGCT+GGG - Chr1:69173680-69173699 MsG0180003849.01.T01:intron 35.0%
ACAAGTGTTAAACTTGGATC+AGG + Chr1:69173782-69173801 None:intergenic 35.0%
ACCTGATGGAGCTATAAAAA+AGG + Chr1:69174268-69174287 None:intergenic 35.0%
ATGTCTTTCAAATTGTCCTC+AGG + Chr1:69171665-69171684 None:intergenic 35.0%
CAAGTGTTAAACTTGGATCA+GGG + Chr1:69173781-69173800 None:intergenic 35.0%
CTCTCTTACTAGGAAAAAGT+TGG + Chr1:69171218-69171237 None:intergenic 35.0%
GAAAGGACCAAAATGTGTAA+CGG - Chr1:69170384-69170403 MsG0180003849.01.T01:intron 35.0%
GATAAGGTTTCATCTATGGA+GGG - Chr1:69171721-69171740 MsG0180003849.01.T01:intron 35.0%
GATCTTAGTGAAGCACAAAA+TGG - Chr1:69169996-69170015 MsG0180003849.01.T01:CDS 35.0%
GCATAATCAAGCTACTTCAA+AGG - Chr1:69169849-69169868 MsG0180003849.01.T01:three_prime_UTR 35.0%
GTAGTGACCAAAAATGGTAA+TGG + Chr1:69173382-69173401 None:intergenic 35.0%
TCAATGAAACAATCACCTGA+TGG + Chr1:69174282-69174301 None:intergenic 35.0%
TCTTAGTGAAGCACAAAATG+GGG - Chr1:69169998-69170017 MsG0180003849.01.T01:CDS 35.0%
TGATAAGGTTTCATCTATGG+AGG - Chr1:69171720-69171739 MsG0180003849.01.T01:intron 35.0%
TGCATTTACCTGTATGTAGT+TGG + Chr1:69171805-69171824 None:intergenic 35.0%
TTAGTTGGGACCTAAATTGT+AGG - Chr1:69171436-69171455 MsG0180003849.01.T01:intron 35.0%
TTATATGGTCTATCGGGTAT+GGG + Chr1:69172919-69172938 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG - Chr1:69172337-69172356 MsG0180003849.01.T01:intron 35.0%
TTGTTTAAGGAACCCACAAA+AGG + Chr1:69172329-69172348 None:intergenic 35.0%
TTTATATGGTCTATCGGGTA+TGG + Chr1:69172920-69172939 None:intergenic 35.0%
! AAGAGGGTATAAATCATGTG+TGG - Chr1:69173023-69173042 MsG0180003849.01.T01:intron 35.0%
! ACTCGCTTCTTTAAGAAACA+TGG - Chr1:69174372-69174391 MsG0180003849.01.T01:CDS 35.0%
! CTCTCTTTCCTTACACATTT+TGG - Chr1:69170202-69170221 MsG0180003849.01.T01:CDS 35.0%
! CTTTAAGAAACATGGTGACA+TGG - Chr1:69174380-69174399 MsG0180003849.01.T01:CDS 35.0%
! GAAATTTTGAACCCTGATCT+AGG + Chr1:69170540-69170559 None:intergenic 35.0%
! TCCAAAATGGGCCTTATATT+AGG + Chr1:69172091-69172110 None:intergenic 35.0%
! TCCTAATATAAGGCCCATTT+TGG - Chr1:69172087-69172106 MsG0180003849.01.T01:intron 35.0%
! TGCTTGTTTGAAATGGATGA+TGG - Chr1:69173508-69173527 MsG0180003849.01.T01:intron 35.0%
!! CAACTTTTTCCTAGTAAGAG+AGG - Chr1:69171216-69171235 MsG0180003849.01.T01:intron 35.0%
!! CTTGTGATGGGTTACAATAT+TGG - Chr1:69174160-69174179 MsG0180003849.01.T01:intron 35.0%
!!! ACACTTATTTTTTAGGGCCT+AGG + Chr1:69171321-69171340 None:intergenic 35.0%
!!! ATTGGGATGGTTTTGTTGAT+TGG + Chr1:69169972-69169991 None:intergenic 35.0%
!!! ATTGGGATTTTGAAATTCCC+TGG + Chr1:69169954-69169973 None:intergenic 35.0%
!!! CAACTTTTGTTGACTTGTGA+TGG - Chr1:69174147-69174166 MsG0180003849.01.T01:intron 35.0%
!!! CACTTATTTTTTAGGGCCTA+GGG + Chr1:69171320-69171339 None:intergenic 35.0%
!!! GTTTTGAGATTTTAGTGGTC+TGG + Chr1:69171468-69171487 None:intergenic 35.0%
!!! TTGGGATGGTTTTGTTGATT+GGG + Chr1:69169971-69169990 None:intergenic 35.0%
!!! TTTTTGCTGTTGAAAGTCGA+TGG + Chr1:69170304-69170323 None:intergenic 35.0%
AAAGTTGGCAAAGTTGTGTC+TGG + Chr1:69171203-69171222 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTA+AGG - Chr1:69172207-69172226 MsG0180003849.01.T01:intron 40.0%
AAGCTACTTCAAAGGGGATA+TGG - Chr1:69169857-69169876 MsG0180003849.01.T01:three_prime_UTR 40.0%
AAGTACTTAAGGATGGAGAG+TGG - Chr1:69173866-69173885 MsG0180003849.01.T01:intron 40.0%
AAGTTGGCAAAGTTGTGTCT+GGG + Chr1:69171202-69171221 None:intergenic 40.0%
AATGCTAACAAGTGCCCTAA+GGG - Chr1:69172208-69172227 MsG0180003849.01.T01:intron 40.0%
AGGAGAGAGTCAATGCAATA+TGG - Chr1:69171236-69171255 MsG0180003849.01.T01:intron 40.0%
AGTCAATGCAATATGGTGCA+AGG - Chr1:69171243-69171262 MsG0180003849.01.T01:intron 40.0%
ATGCATTAAGTGTACCTGCA+AGG + Chr1:69173941-69173960 None:intergenic 40.0%
ATGTGGGCTTCAAGTACTTA+AGG - Chr1:69173855-69173874 MsG0180003849.01.T01:intron 40.0%
CCTGATATCCAACTACATAC+AGG - Chr1:69171794-69171813 MsG0180003849.01.T01:intron 40.0%
CCTGTATGTAGTTGGATATC+AGG + Chr1:69171797-69171816 None:intergenic 40.0%
CGAGACATAATGTTTAGGTG+TGG - Chr1:69172024-69172043 MsG0180003849.01.T01:intron 40.0%
CGGAGGTAATACTAAAATGC+AGG - Chr1:69172842-69172861 MsG0180003849.01.T01:intron 40.0%
CGGATCGAGACATAATGTTT+AGG - Chr1:69172019-69172038 MsG0180003849.01.T01:intron 40.0%
CTCTCCCTGTTCCTAATATA+AGG - Chr1:69172077-69172096 MsG0180003849.01.T01:intron 40.0%
GAAACATGGTGACATGGATA+TGG - Chr1:69174386-69174405 MsG0180003849.01.T01:CDS 40.0%
GAATTTGATTAGTGAAGGGC+TGG - Chr1:69173679-69173698 MsG0180003849.01.T01:intron 40.0%
GTTCCTTAAACAATGCCCTT+AGG - Chr1:69172336-69172355 MsG0180003849.01.T01:intron 40.0%
TATCAATCATGGTCTCTCGT+TGG - Chr1:69171566-69171585 MsG0180003849.01.T01:intron 40.0%
TGAGGAGTTTGGATTCTTTC+AGG - Chr1:69170058-69170077 MsG0180003849.01.T01:CDS 40.0%
! ATGGGCCTTATATTAGGAAC+AGG + Chr1:69172085-69172104 None:intergenic 40.0%
! ATTTTCCAATGCAATGCCCT+GGG - Chr1:69172502-69172521 MsG0180003849.01.T01:intron 40.0%
! CTTCTCTCCGTTACACATTT+TGG + Chr1:69170394-69170413 None:intergenic 40.0%
! CTTGTTGTAAAACGGTGATG+AGG + Chr1:69173828-69173847 None:intergenic 40.0%
! GGTCTTATATTTAGTGACGG+AGG - Chr1:69172825-69172844 MsG0180003849.01.T01:intron 40.0%
! TATGGTGCTGAAATCCTATG+AGG - Chr1:69174404-69174423 MsG0180003849.01.T01:CDS 40.0%
! TGGGCCTTATATTAGGAACA+GGG + Chr1:69172084-69172103 None:intergenic 40.0%
! TTTCTTGCAGAGAGTGTGTT+GGG - Chr1:69173615-69173634 MsG0180003849.01.T01:intron 40.0%
!! AAATTCCCTGGTCTTGTTTC+TGG + Chr1:69169942-69169961 None:intergenic 40.0%
!! TTTTCTTGCAGAGAGTGTGT+TGG - Chr1:69173614-69173633 MsG0180003849.01.T01:intron 40.0%
!!! GCCTTTTTTATAGCTCCATC+AGG - Chr1:69174264-69174283 MsG0180003849.01.T01:intron 40.0%
!!! TTATTTTTTAGGGCCTAGGG+CGG + Chr1:69171317-69171336 None:intergenic 40.0%
AAGCATCAAATCTGTGCCTG+AGG - Chr1:69169902-69169921 MsG0180003849.01.T01:three_prime_UTR 45.0%
ACTGCACCAAAGGATAAGCT+GGG + Chr1:69171760-69171779 None:intergenic 45.0%
ATCATCTTAGCAATGCACCC+AGG - Chr1:69172696-69172715 MsG0180003849.01.T01:intron 45.0%
CTATGAGGAAGAGGAACCAA+AGG - Chr1:69174419-69174438 MsG0180003849.01.T01:CDS 45.0%
CTGATCTAACTAATCAGGGG+CGG + Chr1:69173077-69173096 None:intergenic 45.0%
CTGGGACGAACCTACAATTT+AGG + Chr1:69171449-69171468 None:intergenic 45.0%
CTTGCTAACAAGTGCCCTAA+GGG + Chr1:69172354-69172373 None:intergenic 45.0%
GATCCACGATAGGGTTATGT+GGG + Chr1:69173055-69173074 None:intergenic 45.0%
GCAAATTATCAAGGCTGCTG+AGG - Chr1:69170040-69170059 MsG0180003849.01.T01:CDS 45.0%
GCACAGATTTGATGCTTGAC+CGG + Chr1:69169899-69169918 None:intergenic 45.0%
GCTGAAATCCTATGAGGAAG+AGG - Chr1:69174410-69174429 MsG0180003849.01.T01:CDS 45.0%
GGAAATGCTAATAGTGCCCT+GGG + Chr1:69172716-69172735 None:intergenic 45.0%
GGGCTTCAAGTACTTAAGGA+TGG - Chr1:69173859-69173878 MsG0180003849.01.T01:intron 45.0%
GTCTCTCGTTGGATGAAATG+AGG - Chr1:69171577-69171596 MsG0180003849.01.T01:intron 45.0%
GTTAAACTTGGATCAGGGCA+TGG + Chr1:69173776-69173795 None:intergenic 45.0%
GTTTCCTTAACCATGCCTGA+GGG + Chr1:69172570-69172589 None:intergenic 45.0%
TAGACACCCAGCTTATCCTT+TGG - Chr1:69171751-69171770 MsG0180003849.01.T01:intron 45.0%
TCATCTTAGCAATGCACCCA+GGG - Chr1:69172697-69172716 MsG0180003849.01.T01:intron 45.0%
TCTTGCTAACAAGTGCCCTA+AGG + Chr1:69172355-69172374 None:intergenic 45.0%
TGACTCTCTCCTCTCTTACT+AGG + Chr1:69171228-69171247 None:intergenic 45.0%
TGTTTCCTTAACCATGCCTG+AGG + Chr1:69172571-69172590 None:intergenic 45.0%
TTATATCAATACGCGCGACC+TGG + Chr1:69172892-69172911 None:intergenic 45.0%
TTCCTTAACCATTGCCCTGA+GGG + Chr1:69172409-69172428 None:intergenic 45.0%
TTTCCTTAACCATTGCCCTG+AGG + Chr1:69172410-69172429 None:intergenic 45.0%
! CATTTTCCAATGCAATGCCC+TGG - Chr1:69172501-69172520 MsG0180003849.01.T01:intron 45.0%
! CTTTGGTTCCTCTTCCTCAT+AGG + Chr1:69174421-69174440 None:intergenic 45.0%
! GGTGCAAGGCCTAATTTTGA+GGG - Chr1:69171257-69171276 MsG0180003849.01.T01:intron 45.0%
! TGGTGCAAGGCCTAATTTTG+AGG - Chr1:69171256-69171275 MsG0180003849.01.T01:intron 45.0%
! TTCTTGCAGAGAGTGTGTTG+GGG - Chr1:69173616-69173635 MsG0180003849.01.T01:intron 45.0%
!! AAGGCCTAATTTTGAGGGCA+GGG - Chr1:69171262-69171281 MsG0180003849.01.T01:intron 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG + Chr1:69172239-69172220 None:intergenic 45.0%
!!! GGGCCGTTTTGAGATTTTAG+TGG + Chr1:69171473-69171492 None:intergenic 45.0%
!! GAAAAAATATATATATTTAT+TGG + Chr1:69173599-69173618 None:intergenic 5.0%
!! TTTATATATATTTATTAGTT+GGG - Chr1:69171422-69171441 MsG0180003849.01.T01:intron 5.0%
!!! AATAAATCAAATTTTAATTA+AGG - Chr1:69170426-69170445 MsG0180003849.01.T01:intron 5.0%
!!! AATAAATCAAATTTTAATTA+AGG + Chr1:69170445-69170426 None:intergenic 5.0%
!!! AATTAAAATTTGATTTATTT+TGG - Chr1:69170171-69170190 MsG0180003849.01.T01:CDS 5.0%
!!! AATTAAAATTTGATTTATTT+TGG + Chr1:69170190-69170171 None:intergenic 5.0%
!!! ATAAATCAAATTTTAATTAA+GGG - Chr1:69170427-69170446 MsG0180003849.01.T01:intron 5.0%
!!! ATAAATCAAATTTTAATTAA+GGG + Chr1:69170446-69170427 None:intergenic 5.0%
!!! TATTTTAATAAAAAAAATGT+CGG + Chr1:69171543-69171562 None:intergenic 5.0%
AAACTTGGATCAGGGCATGG+TGG + Chr1:69173773-69173792 None:intergenic 50.0%
ATCAAGGCTGCTGAGGAGTT+TGG - Chr1:69170047-69170066 MsG0180003849.01.T01:CDS 50.0%
ATGCAGGAAAACGAGCACGA+TGG - Chr1:69172858-69172877 MsG0180003849.01.T01:intron 50.0%
CAAGCACGACTTGTATCCTG+AGG - Chr1:69171646-69171665 MsG0180003849.01.T01:intron 50.0%
CACTGCACCAAAGGATAAGC+TGG + Chr1:69171761-69171780 None:intergenic 50.0%
CTCAAAACGGCCCTGTTTGA+GGG - Chr1:69171480-69171499 MsG0180003849.01.T01:intron 50.0%
GATTAGTGAAGGGCTGGGTT+TGG - Chr1:69173685-69173704 MsG0180003849.01.T01:intron 50.0%
GGATCCACGATAGGGTTATG+TGG + Chr1:69173056-69173075 None:intergenic 50.0%
GGGAAATGCTAATAGTGCCC+TGG + Chr1:69172717-69172736 None:intergenic 50.0%
GGTGGGAATACATAGTCCTC+AGG + Chr1:69169921-69169940 None:intergenic 50.0%
GTCTTGAACCCCCTCAAACA+GGG + Chr1:69171493-69171512 None:intergenic 50.0%
GTTGCTAGGACCCTAGATCA+GGG - Chr1:69170526-69170545 MsG0180003849.01.T01:CDS 50.0%
TAGCCCACATAACCCTATCG+TGG - Chr1:69173049-69173068 MsG0180003849.01.T01:intron 50.0%
TCAAAACGGCCCTGTTTGAG+GGG - Chr1:69171481-69171500 MsG0180003849.01.T01:intron 50.0%
TCCCACCAGAAACAAGACCA+GGG - Chr1:69169934-69169953 MsG0180003849.01.T01:three_prime_UTR 50.0%
TCTCAAAACGGCCCTGTTTG+AGG - Chr1:69171479-69171498 MsG0180003849.01.T01:intron 50.0%
TGCAGGAAAACGAGCACGAT+GGG - Chr1:69172859-69172878 MsG0180003849.01.T01:intron 50.0%
TGTCTTGAACCCCCTCAAAC+AGG + Chr1:69171494-69171513 None:intergenic 50.0%
TTCCCACCAGAAACAAGACC+AGG - Chr1:69169933-69169952 MsG0180003849.01.T01:three_prime_UTR 50.0%
! AAGTGTTGCCACTGCACCAA+AGG + Chr1:69171770-69171789 None:intergenic 50.0%
! CAGCTTATCCTTTGGTGCAG+TGG - Chr1:69171759-69171778 MsG0180003849.01.T01:intron 50.0%
!! CAAGGCCTAATTTTGAGGGC+AGG - Chr1:69171261-69171280 MsG0180003849.01.T01:intron 50.0%
!! GGTCTTGCTAAAAGTGCCCA+GGG + Chr1:69172521-69172540 None:intergenic 50.0%
!! TCCCTGGTCTTGTTTCTGGT+GGG + Chr1:69169938-69169957 None:intergenic 50.0%
!! TTCCCTGGTCTTGTTTCTGG+TGG + Chr1:69169939-69169958 None:intergenic 50.0%
ACGGCCCTGCCCTCAAAATT+AGG + Chr1:69171269-69171288 None:intergenic 55.0%
AGCACGATGGGAGTGAAACC+AGG - Chr1:69172871-69172890 MsG0180003849.01.T01:intron 55.0%
CAAAACGGCCCTGTTTGAGG+GGG - Chr1:69171482-69171501 MsG0180003849.01.T01:intron 55.0%
CAACATAGGCTACGCCTTGC+AGG - Chr1:69173924-69173943 MsG0180003849.01.T01:intron 55.0%
CATGCCCTCAGGCATGGTTA+AGG - Chr1:69172563-69172582 MsG0180003849.01.T01:intron 55.0%
CGTTGCTAGGACCCTAGATC+AGG - Chr1:69170525-69170544 MsG0180003849.01.T01:CDS 55.0%
CTTAACCATGCCTGAGGGCA+TGG + Chr1:69172565-69172584 None:intergenic 55.0%
CTTGCTAACCAGTGCCCTCA+GGG - Chr1:69172392-69172411 MsG0180003849.01.T01:intron 55.0%
GTCTTGCTAACCATGCCCTC+AGG - Chr1:69172552-69172571 MsG0180003849.01.T01:intron 55.0%
TCTTCGCCCTACCCCAGATA+CGG + Chr1:69171288-69171307 None:intergenic 55.0%
TCTTGCTAACCAGTGCCCTC+AGG - Chr1:69172391-69172410 MsG0180003849.01.T01:intron 55.0%
TGCCCTCAGGGCAATGGTTA+AGG - Chr1:69172404-69172423 MsG0180003849.01.T01:intron 55.0%
TGGTGCAGTGGCAACACTTG+TGG - Chr1:69171771-69171790 MsG0180003849.01.T01:intron 55.0%
! TATCTGGGGTAGGGCGAAGA+GGG - Chr1:69171288-69171307 MsG0180003849.01.T01:intron 55.0%
!! AAGCAACACAGGGCGTTGCT+AGG - Chr1:69170512-69170531 MsG0180003849.01.T01:CDS 55.0%
!! AAGTGCCCAGGGCATTGCAT+TGG + Chr1:69172510-69172529 None:intergenic 55.0%
!! GGGTCTTGCTAAAAGTGCCC+AGG + Chr1:69172522-69172541 None:intergenic 55.0%
AACCAGTGCCCTCAGGGCAA+TGG - Chr1:69172398-69172417 MsG0180003849.01.T01:intron 60.0%
ATCAGGGGCGGATCCACGAT+AGG + Chr1:69173065-69173084 None:intergenic 60.0%
GCTAACCATGCCCTCAGGCA+TGG - Chr1:69172557-69172576 MsG0180003849.01.T01:intron 60.0%
TCAGGGGCGGATCCACGATA+GGG + Chr1:69173064-69173083 None:intergenic 60.0%
TTGAGGGCAGGGCCGTATCT+GGG - Chr1:69171273-69171292 MsG0180003849.01.T01:intron 60.0%
TTTGAGGGCAGGGCCGTATC+TGG - Chr1:69171272-69171291 MsG0180003849.01.T01:intron 60.0%
! AACCATTGCCCTGAGGGCAC+TGG + Chr1:69172403-69172422 None:intergenic 60.0%
! GAAGGGCTGGGTTTGGAGTG+TGG - Chr1:69173692-69173711 MsG0180003849.01.T01:intron 60.0%
! GTATCTGGGGTAGGGCGAAG+AGG - Chr1:69171287-69171306 MsG0180003849.01.T01:intron 60.0%
TGAGGGCAGGGCCGTATCTG+GGG - Chr1:69171274-69171293 MsG0180003849.01.T01:intron 65.0%
! GCAGGGCCGTATCTGGGGTA+GGG - Chr1:69171279-69171298 MsG0180003849.01.T01:intron 65.0%
! GGCAGGGCCGTATCTGGGGT+AGG - Chr1:69171278-69171297 MsG0180003849.01.T01:intron 70.0%
GCGAAGAGGGCGACCGCCCT+AGG - Chr1:69171301-69171320 MsG0180003849.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 69169820 69174620 69169820 ID=MsG0180003849.01;Name=MsG0180003849.01
Chr1 mRNA 69169820 69174620 69169820 ID=MsG0180003849.01.T01;Parent=MsG0180003849.01;Name=MsG0180003849.01.T01;_AED=0.50;_eAED=0.50;_QI=56|0.5|0.66|1|1|1|3|174|205
Chr1 exon 69174361 69174620 69174361 ID=MsG0180003849.01.T01:exon:26957;Parent=MsG0180003849.01.T01
Chr1 exon 69170495 69170650 69170495 ID=MsG0180003849.01.T01:exon:26958;Parent=MsG0180003849.01.T01
Chr1 exon 69169820 69170251 69169820 ID=MsG0180003849.01.T01:exon:26959;Parent=MsG0180003849.01.T01
Chr1 five_prime_UTR 69174565 69174620 69174565 ID=MsG0180003849.01.T01:five_prime_utr;Parent=MsG0180003849.01.T01
Chr1 CDS 69174361 69174564 69174361 ID=MsG0180003849.01.T01:cds;Parent=MsG0180003849.01.T01
Chr1 CDS 69170495 69170650 69170495 ID=MsG0180003849.01.T01:cds;Parent=MsG0180003849.01.T01
Chr1 CDS 69169994 69170251 69169994 ID=MsG0180003849.01.T01:cds;Parent=MsG0180003849.01.T01
Chr1 three_prime_UTR 69169820 69169993 69169820 ID=MsG0180003849.01.T01:three_prime_utr;Parent=MsG0180003849.01.T01
Gene Sequence

>MsG0180003849.01.T01

ATGGAGAAATTTATTTCAAACCGGTCAAGCATCAAATCTGTGCCTGAGGACTATGTATTCCCACCAGAAACAAGACCAGGGAATTTCAAAATCCCAATCAACAAAACCATCCCAATAATTGATCTTAGTGAAGCACAAAATGGGGATAGAACCAAATCAATTCAGCAAATTATCAAGGCTGCTGAGGAGTTTGGATTCTTTCAGTTTAACACTTGTATAACCAAACACTTTGATGCTTACCTCATCACCGTTTTACAACAAGAAGATATATGTGGGCTTCAAGTACTTAAGGATGGAGAGTGGATTGCTGTTGATGCTATTCCTCATGCATTTGTTATCAACATAGGCTACGCCTTGCAGATAATCACTAATGGAAAGCTAAAAAGTGTGGAACATAGAGTTGTGACAAATTCAGATCAAGCTCGCACAACTGCTGCCTTTTTTATAGCTCCATCAGGTGATTGTTTCATTGAACCAACAAAAGATCTCATTGATGACCACAATCCACCTATTTATAAGTCTTACAAATACAAGGAGTTGCTCACTCGCTTCTTTAAGAAACATGGTGACATGGATATGGTGCTGAAATCCTATGAGGAAGAGGAACCAAAGGATTAA

Protein sequence

>MsG0180003849.01.T01

MEKFISNRSSIKSVPEDYVFPPETRPGNFKIPINKTIPIIDLSEAQNGDRTKSIQQIIKAAEEFGFFQFNTCITKHFDAYLITVLQQEDICGLQVLKDGEWIAVDAIPHAFVINIGYALQIITNGKLKSVEHRVVTNSDQARTTAAFFIAPSGDCFIEPTKDLIDDHNPPIYKSYKYKELLTRFFKKHGDMDMVLKSYEEEEPKD*