AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045645.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045645.01.T01 MTR_8g075890 98.082 365 6 1 1 364 1 365 0.0 745
MsG0880045645.01.T01 MTR_8g075830 89.863 365 36 1 1 364 1 365 0.0 691
MsG0880045645.01.T01 MTR_3g058610 80.508 354 68 1 1 353 1 354 0.0 613
MsG0880045645.01.T01 MTR_5g022020 79.775 356 71 1 1 355 1 356 0.0 592
MsG0880045645.01.T01 MTR_8g024120 38.318 321 188 8 16 332 18 332 8.75e-68 217
MsG0880045645.01.T01 MTR_3g092890 37.888 322 187 8 16 333 15 327 4.40e-66 213
MsG0880045645.01.T01 MTR_7g062550 37.160 331 200 6 18 345 38 363 2.78e-64 209
MsG0880045645.01.T01 MTR_7g062600 37.092 337 197 8 18 344 29 360 6.31e-63 205
MsG0880045645.01.T01 MTR_7g062580 35.952 331 204 6 18 345 33 358 8.94e-63 205
MsG0880045645.01.T01 MTR_3g063180 36.749 283 166 5 39 312 42 320 1.17e-62 204
MsG0880045645.01.T01 MTR_5g082750 36.593 317 192 7 15 325 24 337 4.56e-62 203
MsG0880045645.01.T01 MTR_7g062570 36.585 328 200 6 20 344 35 357 5.08e-62 202
MsG0880045645.01.T01 MTR_4g015790 35.866 329 202 6 3 325 26 351 6.22e-62 203
MsG0880045645.01.T01 MTR_3g070860 36.700 297 179 6 15 305 25 318 1.71e-61 201
MsG0880045645.01.T01 MTR_7g068650 35.644 303 179 6 15 305 25 323 5.45e-61 200
MsG0880045645.01.T01 MTR_1g062110 38.406 276 152 7 38 303 65 332 1.39e-57 192
MsG0880045645.01.T01 MTR_5g032870 36.271 295 180 6 15 304 14 305 4.78e-57 189
MsG0880045645.01.T01 MTR_5g032880 36.949 295 178 6 15 304 352 643 8.61e-57 196
MsG0880045645.01.T01 MTR_5g032880 35.593 295 176 5 15 305 14 298 8.41e-53 186
MsG0880045645.01.T01 MTR_7g063730 33.435 329 211 6 20 345 44 367 6.37e-55 184
MsG0880045645.01.T01 MTR_2g437380 34.459 296 184 5 14 304 26 316 2.34e-54 183
MsG0880045645.01.T01 MTR_7g102820 35.667 300 163 9 26 303 48 339 3.82e-53 180
MsG0880045645.01.T01 MTR_7g081710 32.515 326 213 6 15 337 24 345 1.71e-52 177
MsG0880045645.01.T01 MTR_5g059140 32.468 308 192 6 4 303 6 305 1.53e-51 175
MsG0880045645.01.T01 MTR_6g015950 33.636 330 201 8 15 337 15 333 1.99e-51 174
MsG0880045645.01.T01 MTR_8g064200 32.517 286 183 5 23 304 35 314 2.43e-51 175
MsG0880045645.01.T01 MTR_8g064200 32.517 286 183 5 23 304 40 319 2.75e-51 175
MsG0880045645.01.T01 MTR_3g026150 32.738 336 205 9 11 333 24 351 3.16e-51 174
MsG0880045645.01.T01 MTR_5g059130 33.550 307 190 7 4 303 6 305 3.64e-51 174
MsG0880045645.01.T01 MTR_7g016090 32.012 328 208 8 8 330 8 325 5.85e-51 173
MsG0880045645.01.T01 MTR_7g016090 32.012 328 208 8 8 330 10 327 5.90e-51 173
MsG0880045645.01.T01 MTR_4g087090 32.899 307 191 6 18 312 10 313 8.90e-51 173
MsG0880045645.01.T01 MTR_5g048470 31.438 299 197 5 38 333 52 345 1.23e-50 173
MsG0880045645.01.T01 MTR_4g117880 36.201 279 164 8 19 292 41 310 1.37e-50 173
MsG0880045645.01.T01 MTR_8g008930 33.788 293 181 7 19 305 41 326 7.44e-50 171
MsG0880045645.01.T01 MTR_7g045650 38.023 263 156 5 18 278 38 295 7.47e-50 170
MsG0880045645.01.T01 MTR_5g085330 36.431 269 156 7 39 303 5 262 8.03e-50 170
MsG0880045645.01.T01 MTR_1g034140 32.890 301 182 3 16 303 4 297 9.74e-50 170
MsG0880045645.01.T01 MTR_3g117420 32.414 290 189 6 39 324 52 338 1.46e-49 170
MsG0880045645.01.T01 MTR_4g087120 29.552 335 215 8 16 332 4 335 2.70e-49 169
MsG0880045645.01.T01 MTR_1g070135 32.653 294 186 6 14 303 13 298 3.03e-49 169
MsG0880045645.01.T01 MTR_3g091350 35.036 274 158 8 39 303 59 321 3.48e-49 169
MsG0880045645.01.T01 MTR_3g072810 33.934 333 204 7 4 330 6 328 7.46e-49 167
MsG0880045645.01.T01 MTR_5g011250 33.233 331 195 9 19 328 17 342 8.31e-49 168
MsG0880045645.01.T01 MTR_3g072820 32.787 305 192 6 4 303 7 303 1.84e-48 167
MsG0880045645.01.T01 MTR_1g070080 35.294 272 164 6 36 303 35 298 2.15e-48 167
MsG0880045645.01.T01 MTR_2g072910 31.624 351 213 6 10 357 20 346 3.13e-48 167
MsG0880045645.01.T01 MTR_1g070120 30.915 317 206 8 19 330 18 326 3.68e-48 166
MsG0880045645.01.T01 MTR_8g009090 34.812 293 177 8 19 305 41 325 4.64e-48 166
MsG0880045645.01.T01 MTR_5g055900 30.537 298 200 4 38 333 46 338 7.27e-48 166
MsG0880045645.01.T01 MTR_3g083370 35.424 271 160 7 37 303 2 261 7.34e-48 164
MsG0880045645.01.T01 MTR_2g072890 34.201 269 173 3 38 305 51 316 8.91e-48 166
MsG0880045645.01.T01 MTR_1g102070 34.967 306 183 7 8 303 30 329 9.37e-48 166
MsG0880045645.01.T01 MTR_1g033810 33.564 289 183 5 20 304 27 310 1.98e-47 164
MsG0880045645.01.T01 MTR_1g062110 38.723 235 126 7 38 262 65 291 2.30e-47 163
MsG0880045645.01.T01 MTR_0328s0030 34.420 276 172 6 23 295 28 297 3.20e-47 164
MsG0880045645.01.T01 MTR_5g065010 32.733 333 194 12 9 332 20 331 3.31e-47 164
MsG0880045645.01.T01 MTR_6g464620 34.539 304 187 6 8 303 35 334 3.48e-47 164
MsG0880045645.01.T01 MTR_8g074050 31.419 296 192 6 39 326 52 344 5.45e-47 163
MsG0880045645.01.T01 MTR_2g069010 34.630 257 157 4 39 292 69 317 6.95e-47 164
MsG0880045645.01.T01 MTR_8g009080 35.055 271 166 5 39 305 94 358 7.23e-47 164
MsG0880045645.01.T01 MTR_4g024660 31.629 313 196 5 31 333 59 363 2.27e-46 162
MsG0880045645.01.T01 MTR_1g034120 28.840 319 199 6 16 312 4 316 3.32e-46 161
MsG0880045645.01.T01 MTR_2g069060 34.182 275 173 4 33 305 43 311 4.76e-46 160
MsG0880045645.01.T01 MTR_5g055690 32.491 277 182 4 60 333 65 339 5.15e-46 161
MsG0880045645.01.T01 MTR_1g070085 30.473 338 227 5 14 348 12 344 7.24e-46 160
MsG0880045645.01.T01 MTR_1g070085 30.473 338 227 5 14 348 12 344 7.24e-46 160
MsG0880045645.01.T01 MTR_8g009110 34.828 290 168 9 11 292 34 310 7.35e-46 160
MsG0880045645.01.T01 MTR_3g091360 33.942 274 161 8 39 303 52 314 1.11e-45 160
MsG0880045645.01.T01 MTR_1g034060 28.527 319 200 6 16 312 4 316 1.63e-45 159
MsG0880045645.01.T01 MTR_3g088565 33.700 273 160 7 39 303 3 262 1.71e-45 158
MsG0880045645.01.T01 MTR_5g055680 29.762 336 211 9 10 333 16 338 2.31e-45 159
MsG0880045645.01.T01 MTR_8g062600 33.696 276 166 6 39 305 67 334 2.65e-45 159
MsG0880045645.01.T01 MTR_1g093140 32.692 260 167 4 39 296 73 326 2.67e-45 159
MsG0880045645.01.T01 MTR_0009s0480 34.979 243 153 4 63 303 67 306 2.85e-45 159
MsG0880045645.01.T01 MTR_7g016080 31.773 299 180 9 13 305 13 293 5.13e-45 157
MsG0880045645.01.T01 MTR_5g055820 31.387 274 183 4 63 333 68 339 5.72e-45 158
MsG0880045645.01.T01 MTR_5g048850 32.857 280 172 6 30 298 36 310 7.12e-45 158
MsG0880045645.01.T01 MTR_0009s0050 30.408 319 200 9 25 333 32 338 7.27e-45 158
MsG0880045645.01.T01 MTR_0009s0050 30.408 319 200 9 25 333 32 338 1.03e-44 157
MsG0880045645.01.T01 MTR_1g070185 31.164 292 183 6 20 305 49 328 1.26e-44 157
MsG0880045645.01.T01 MTR_5g048550 30.640 297 198 5 10 303 16 307 1.36e-44 157
MsG0880045645.01.T01 MTR_7g056347 33.725 255 162 3 39 292 67 315 3.25e-44 156
MsG0880045645.01.T01 MTR_8g009170 33.808 281 168 8 19 292 41 310 3.39e-44 156
MsG0880045645.01.T01 MTR_1g093110 32.549 255 165 3 39 292 70 318 3.88e-44 156
MsG0880045645.01.T01 MTR_4g087100 31.373 306 190 7 16 304 4 306 4.35e-44 155
MsG0880045645.01.T01 MTR_8g009160 33.210 271 171 5 33 300 54 317 5.54e-44 155
MsG0880045645.01.T01 MTR_2g068840 33.942 274 168 6 38 304 54 321 7.12e-44 155
MsG0880045645.01.T01 MTR_7g029655 35.156 256 155 6 39 292 67 313 7.49e-44 155
MsG0880045645.01.T01 MTR_4g087110 30.225 311 189 7 16 305 4 307 7.84e-44 155
MsG0880045645.01.T01 MTR_2g025120 35.433 254 151 6 54 303 17 261 1.06e-43 154
MsG0880045645.01.T01 MTR_2g068950 32.549 255 165 3 39 292 63 311 1.66e-43 154
MsG0880045645.01.T01 MTR_0032s0040 35.659 258 153 6 39 292 70 318 2.07e-43 154
MsG0880045645.01.T01 MTR_1g093120 32.707 266 164 5 31 292 61 315 2.15e-43 154
MsG0880045645.01.T01 MTR_8g028435 32.491 277 176 6 19 292 41 309 2.16e-43 154
MsG0880045645.01.T01 MTR_1g048940 30.420 286 191 6 11 292 16 297 2.50e-43 154
MsG0880045645.01.T01 MTR_5g048740 33.209 268 170 6 30 294 36 297 2.98e-43 153
MsG0880045645.01.T01 MTR_8g063070 30.968 310 201 5 33 339 61 360 3.31e-43 154
MsG0880045645.01.T01 MTR_2g069020 32.707 266 168 4 30 292 58 315 4.67e-43 153
MsG0880045645.01.T01 MTR_4g087140 29.221 308 197 8 16 305 4 308 9.51e-43 152
MsG0880045645.01.T01 MTR_2g068960 32.157 255 166 3 39 292 63 311 1.10e-42 152
MsG0880045645.01.T01 MTR_5g048570 28.710 310 206 6 30 333 36 336 1.15e-42 152
MsG0880045645.01.T01 MTR_2g069020 32.707 266 168 4 30 292 58 315 1.24e-42 153
MsG0880045645.01.T01 MTR_4g093840 33.333 300 164 10 17 303 48 324 1.30e-42 152
MsG0880045645.01.T01 MTR_3g045230 30.968 310 196 7 39 342 56 353 2.42e-42 151
MsG0880045645.01.T01 MTR_8g074070 31.599 269 179 4 38 304 51 316 6.61e-42 150
MsG0880045645.01.T01 MTR_2g069060 36.522 230 139 3 33 261 21 244 6.81e-42 147
MsG0880045645.01.T01 MTR_4g116010 32.727 275 164 5 39 305 50 311 9.30e-42 149
MsG0880045645.01.T01 MTR_1g081840 31.351 370 220 9 8 362 25 375 1.46e-41 149
MsG0880045645.01.T01 MTR_5g055800 31.933 238 157 4 60 295 65 299 1.69e-41 149
MsG0880045645.01.T01 MTR_2g069210 32.959 267 172 4 34 299 59 319 3.51e-41 148
MsG0880045645.01.T01 MTR_2g069090 34.221 263 161 6 34 292 63 317 4.55e-41 148
MsG0880045645.01.T01 MTR_3g117485 34.298 242 152 5 67 304 6 244 1.09e-40 145
MsG0880045645.01.T01 MTR_3g117485 34.137 249 157 5 60 304 71 316 1.17e-40 147
MsG0880045645.01.T01 MTR_3g026150 34.818 247 155 5 90 333 5 248 1.97e-40 143
MsG0880045645.01.T01 MTR_7g102720 28.923 325 219 6 21 342 19 334 2.47e-40 145
MsG0880045645.01.T01 MTR_8g033380 32.566 304 190 6 11 305 28 325 2.67e-40 146
MsG0880045645.01.T01 MTR_3g043900 30.421 309 198 6 39 342 56 352 3.49e-40 145
MsG0880045645.01.T01 MTR_2g069190 33.716 261 164 4 34 292 63 316 4.78e-40 145
MsG0880045645.01.T01 MTR_8g009080 36.161 224 136 3 39 261 94 311 4.57e-39 142
MsG0880045645.01.T01 MTR_8g009080 36.161 224 136 3 39 261 94 311 4.67e-39 142
MsG0880045645.01.T01 MTR_7g062560 30.189 318 204 8 19 333 41 343 5.23e-39 142
MsG0880045645.01.T01 MTR_8g041620 34.328 268 163 8 39 300 68 328 6.15e-39 142
MsG0880045645.01.T01 MTR_2g437380 32.700 263 169 4 83 342 4 261 6.31e-39 140
MsG0880045645.01.T01 MTR_2g069300 32.955 264 169 4 33 294 48 305 9.45e-39 142
MsG0880045645.01.T01 MTR_1g032250 33.218 289 176 7 14 296 46 323 2.43e-38 141
MsG0880045645.01.T01 MTR_1g032140 33.113 302 185 8 38 333 65 355 2.45e-38 140
MsG0880045645.01.T01 MTR_3g088745 33.237 346 190 11 38 363 35 359 2.81e-38 140
MsG0880045645.01.T01 MTR_7g451860 30.897 301 188 7 38 333 40 325 2.83e-38 140
MsG0880045645.01.T01 MTR_7g047670 30.897 301 188 7 38 333 40 325 2.83e-38 140
MsG0880045645.01.T01 MTR_1g070135 31.474 251 160 6 14 260 13 255 4.86e-38 138
MsG0880045645.01.T01 MTR_8g009170 34.400 250 146 8 19 261 41 279 7.26e-38 138
MsG0880045645.01.T01 MTR_1g032220 32.333 300 190 7 38 333 72 362 7.76e-38 139
MsG0880045645.01.T01 MTR_8g041600 33.591 259 159 6 39 292 68 318 8.59e-38 139
MsG0880045645.01.T01 MTR_3g026150 32.567 261 158 7 11 260 24 277 9.31e-38 137
MsG0880045645.01.T01 MTR_2g102570 31.621 253 157 4 61 303 66 312 1.20e-37 139
MsG0880045645.01.T01 MTR_7g105070 31.801 261 169 5 36 294 56 309 1.75e-37 138
MsG0880045645.01.T01 MTR_2g072910 32.549 255 166 4 10 261 20 271 4.33e-37 135
MsG0880045645.01.T01 MTR_0009s0480 36.000 200 123 4 64 261 68 264 1.39e-36 134
MsG0880045645.01.T01 MTR_3g096500 31.915 282 162 7 40 303 67 336 1.82e-36 136
MsG0880045645.01.T01 MTR_1g043760 31.408 277 176 3 20 292 35 301 2.39e-36 135
MsG0880045645.01.T01 MTR_1g070085 32.296 257 160 5 95 348 21 266 8.27e-36 131
MsG0880045645.01.T01 MTR_8g469400 31.734 271 161 6 31 298 59 308 9.57e-36 134
MsG0880045645.01.T01 MTR_1g043770 32.117 274 169 6 39 305 53 316 1.26e-35 133
MsG0880045645.01.T01 MTR_1g070100 32.296 257 160 5 95 348 17 262 1.92e-35 130
MsG0880045645.01.T01 MTR_8g074070 31.227 269 161 6 38 304 51 297 2.13e-35 132
MsG0880045645.01.T01 MTR_5g048850 32.340 235 151 5 30 261 36 265 4.98e-35 130
MsG0880045645.01.T01 MTR_0009s0050 31.982 222 143 4 114 333 25 240 6.25e-35 129
MsG0880045645.01.T01 MTR_0009s0050 31.982 222 143 4 114 333 25 240 7.21e-35 129
MsG0880045645.01.T01 MTR_6g092620 32.155 283 151 10 39 303 3 262 7.41e-35 130
MsG0880045645.01.T01 MTR_1g043810 30.142 282 174 5 20 292 35 302 2.38e-34 130
MsG0880045645.01.T01 MTR_5g055690 33.480 227 142 5 38 261 46 266 3.54e-34 127
MsG0880045645.01.T01 MTR_2g019370 31.136 273 172 7 44 304 25 293 1.19e-33 127
MsG0880045645.01.T01 MTR_8g041600 35.088 228 135 6 39 261 68 287 2.05e-33 126
MsG0880045645.01.T01 MTR_5g005570 30.333 300 188 8 38 333 36 318 2.59e-33 126
MsG0880045645.01.T01 MTR_1g011580 32.975 279 167 7 39 313 63 325 2.62e-33 127
MsG0880045645.01.T01 MTR_3g083370 34.934 229 134 7 37 261 2 219 3.71e-33 123
MsG0880045645.01.T01 MTR_0056s0160 31.937 191 123 3 114 303 8 192 5.72e-33 123
MsG0880045645.01.T01 MTR_2g033270 29.180 305 185 8 49 337 23 312 8.08e-33 125
MsG0880045645.01.T01 MTR_8g093980 29.967 307 196 8 7 303 29 326 8.23e-33 126
MsG0880045645.01.T01 MTR_1g043775 30.000 280 177 6 20 292 35 302 1.04e-32 125
MsG0880045645.01.T01 MTR_2g083000 30.233 301 187 8 38 333 32 314 1.97e-32 124
MsG0880045645.01.T01 MTR_4g087130 29.085 306 198 7 16 305 4 306 2.30e-32 124
MsG0880045645.01.T01 MTR_2g070870 27.425 299 193 9 27 316 16 299 2.52e-32 124
MsG0880045645.01.T01 MTR_4g074130 28.146 302 194 8 38 333 39 323 5.41e-32 123
MsG0880045645.01.T01 MTR_2g068800 31.579 247 141 6 38 279 54 277 1.79e-31 120
MsG0880045645.01.T01 MTR_2g083030 29.043 303 193 8 36 333 34 319 1.91e-31 121
MsG0880045645.01.T01 MTR_8g009120 32.342 269 149 9 33 292 54 298 2.38e-31 122
MsG0880045645.01.T01 MTR_5g025090 26.623 308 206 7 39 342 5 296 4.16e-31 120
MsG0880045645.01.T01 MTR_2g025120 36.408 206 118 6 61 262 24 220 4.31e-31 118
MsG0880045645.01.T01 MTR_1g086550 27.848 316 205 7 49 345 24 335 5.16e-31 120
MsG0880045645.01.T01 MTR_8g009150 29.658 263 156 5 33 292 54 290 7.37e-31 120
MsG0880045645.01.T01 MTR_4g123020 28.065 310 200 8 39 338 20 316 8.43e-31 119
MsG0880045645.01.T01 MTR_8g461330 26.364 330 207 10 35 345 23 335 1.79e-30 119
MsG0880045645.01.T01 MTR_4g119410 31.698 265 166 4 39 298 67 321 2.41e-30 119
MsG0880045645.01.T01 MTR_8g006930 32.171 258 162 5 39 292 67 315 3.30e-30 119
MsG0880045645.01.T01 MTR_3g040410 28.947 304 196 9 39 338 6 293 1.10e-29 116
MsG0880045645.01.T01 MTR_0009s0050 36.250 160 98 3 176 333 1 158 1.41e-29 112
MsG0880045645.01.T01 MTR_7g078010 33.977 259 156 7 39 292 67 315 1.50e-29 117
MsG0880045645.01.T01 MTR_7g056393 32.685 257 162 5 39 292 67 315 2.48e-29 116
MsG0880045645.01.T01 MTR_1g070110 32.444 225 113 6 83 303 4 193 4.11e-29 113
MsG0880045645.01.T01 MTR_1g043770 32.599 227 139 4 39 261 53 269 5.87e-29 114
MsG0880045645.01.T01 MTR_8g093930 30.182 275 172 7 39 301 47 313 2.00e-28 114
MsG0880045645.01.T01 MTR_4g115990 29.352 293 165 10 39 325 46 302 3.75e-28 112
MsG0880045645.01.T01 MTR_7g056353 29.218 243 164 3 58 300 63 297 4.44e-28 115
MsG0880045645.01.T01 MTR_5g025050 27.119 295 195 7 39 329 5 283 2.40e-27 110
MsG0880045645.01.T01 MTR_5g027230 27.864 323 199 10 39 354 6 301 3.45e-27 109
MsG0880045645.01.T01 MTR_1g043810 29.084 251 155 5 20 261 35 271 1.68e-26 108
MsG0880045645.01.T01 MTR_8g030880 27.985 268 173 6 36 292 2 260 1.21e-25 105
MsG0880045645.01.T01 MTR_4g132770 45.714 105 54 2 200 303 29 131 2.55e-25 100
MsG0880045645.01.T01 MTR_1g043775 28.916 249 158 6 20 261 35 271 8.22e-25 103
MsG0880045645.01.T01 MTR_7g078010 35.088 228 133 7 39 261 67 284 8.23e-25 102
MsG0880045645.01.T01 MTR_7g077670 28.626 262 169 6 38 292 10 260 8.67e-25 103
MsG0880045645.01.T01 MTR_8g009180 39.844 128 75 1 165 292 114 239 1.04e-24 102
MsG0880045645.01.T01 MTR_6g088665 29.749 279 173 8 44 301 21 297 3.12e-24 102
MsG0880045645.01.T01 MTR_1g032240 45.045 111 49 3 187 296 48 147 3.73e-24 98.2
MsG0880045645.01.T01 MTR_6g088665 30.249 281 170 10 44 301 21 298 4.61e-24 101
MsG0880045645.01.T01 MTR_8g102600 28.920 287 171 9 63 326 31 307 5.15e-24 101
MsG0880045645.01.T01 MTR_5g025060 28.720 289 164 11 39 325 6 254 6.13e-24 100
MsG0880045645.01.T01 MTR_0009s0400 45.361 97 50 2 200 295 1 95 2.39e-23 95.1
MsG0880045645.01.T01 MTR_4g011720 26.596 282 194 6 55 331 27 300 1.44e-22 97.1
MsG0880045645.01.T01 MTR_4g096840 25.271 277 191 7 46 311 28 299 5.94e-22 95.5
MsG0880045645.01.T01 MTR_3g464530 25.632 277 185 8 63 333 49 310 9.78e-22 94.7
MsG0880045645.01.T01 MTR_1g027290 26.846 298 190 10 22 303 12 297 1.00e-21 95.1
MsG0880045645.01.T01 MTR_1g043840 37.594 133 81 1 160 292 54 184 1.20e-21 94.7
MsG0880045645.01.T01 MTR_4g100600 26.642 274 184 7 39 301 9 276 1.62e-21 94.4
MsG0880045645.01.T01 MTR_5g024940 26.263 297 180 8 39 331 6 267 1.20e-20 91.3
MsG0880045645.01.T01 MTR_4g100590 26.838 272 181 8 39 301 9 271 5.95e-19 86.7
MsG0880045645.01.T01 MTR_8g102600 29.213 267 156 9 83 326 1 257 2.67e-18 84.3
MsG0880045645.01.T01 MTR_4g011690 25.862 290 190 9 38 310 8 289 7.80e-18 83.6
MsG0880045645.01.T01 MTR_3g108520 25.846 325 205 11 38 341 6 315 5.59e-17 81.3
MsG0880045645.01.T01 MTR_7g056370 27.815 151 96 3 39 184 46 188 5.62e-14 70.9
MsG0880045645.01.T01 MTR_4g021360 23.985 271 194 7 38 301 6 271 8.75e-14 71.6
MsG0880045645.01.T01 MTR_4g100600 26.106 226 151 6 39 253 9 229 3.71e-13 68.6
MsG0880045645.01.T01 MTR_4g021380 24.490 294 192 10 37 307 5 291 1.12e-12 68.6
MsG0880045645.01.T01 MTR_3g040440 44.286 70 37 1 213 282 15 82 3.91e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045645.01.T01 AT3G51240 80.495 364 65 3 1 364 1 358 0.0 623
MsG0880045645.01.T01 AT3G51240 82.796 279 43 2 86 364 1 274 4.61e-179 498
MsG0880045645.01.T01 AT4G10490 38.095 315 183 8 18 326 20 328 2.17e-65 211
MsG0880045645.01.T01 AT5G24530 35.366 328 198 6 12 333 11 330 2.38e-65 211
MsG0880045645.01.T01 AT4G10500 33.233 331 210 7 10 335 14 338 2.03e-62 203
MsG0880045645.01.T01 AT3G11180 37.705 305 176 7 25 325 85 379 4.65e-62 204
MsG0880045645.01.T01 AT3G11180 37.705 305 176 7 25 325 85 379 6.48e-62 204
MsG0880045645.01.T01 AT4G16330 38.214 280 157 7 32 305 60 329 1.86e-61 201
MsG0880045645.01.T01 AT2G38240 36.478 318 188 8 15 325 22 332 1.04e-60 199
MsG0880045645.01.T01 AT5G05600 35.331 317 196 7 15 325 37 350 7.35e-59 195
MsG0880045645.01.T01 AT1G78550 34.130 293 188 5 15 305 28 317 1.70e-55 186
MsG0880045645.01.T01 AT3G55970 34.667 300 184 6 16 305 25 322 1.10e-54 184
MsG0880045645.01.T01 AT3G19010 34.539 304 182 5 16 305 4 304 3.21e-54 182
MsG0880045645.01.T01 AT3G19010 34.539 304 182 5 16 305 4 304 3.21e-54 182
MsG0880045645.01.T01 AT3G19000 32.792 308 187 4 16 305 4 309 8.11e-54 181
MsG0880045645.01.T01 AT3G21420 35.154 293 179 5 20 304 32 321 1.62e-52 178
MsG0880045645.01.T01 AT5G08640 33.754 317 197 7 20 330 23 332 2.15e-52 177
MsG0880045645.01.T01 AT5G08640 33.754 317 197 7 20 330 23 332 2.15e-52 177
MsG0880045645.01.T01 AT4G16330 39.381 226 128 5 86 305 1 223 2.11e-51 172
MsG0880045645.01.T01 AT1G55290 32.862 283 170 8 39 313 62 332 1.11e-50 173
MsG0880045645.01.T01 AT3G19000 32.955 264 157 4 16 261 4 265 3.37e-49 167
MsG0880045645.01.T01 AT1G17020 34.589 292 181 7 10 294 20 308 3.92e-49 169
MsG0880045645.01.T01 AT3G13610 32.039 309 189 8 14 313 36 332 5.61e-49 169
MsG0880045645.01.T01 AT2G36690 33.103 290 175 8 16 294 32 313 6.95e-49 169
MsG0880045645.01.T01 AT2G36690 33.103 290 175 8 16 294 32 313 6.95e-49 169
MsG0880045645.01.T01 AT4G25300 30.960 323 216 7 15 333 27 346 1.82e-48 167
MsG0880045645.01.T01 AT4G25310 31.988 322 210 7 15 333 28 343 9.68e-48 165
MsG0880045645.01.T01 AT1G03400 36.220 254 146 5 39 290 56 295 1.24e-47 165
MsG0880045645.01.T01 AT5G43440 33.948 271 169 6 39 305 62 326 1.27e-47 165
MsG0880045645.01.T01 AT1G17010 32.542 295 192 6 15 305 28 319 2.42e-47 164
MsG0880045645.01.T01 AT3G60290 34.241 257 164 5 39 294 52 304 4.28e-47 164
MsG0880045645.01.T01 AT5G59540 32.847 274 172 5 38 305 60 327 7.02e-47 163
MsG0880045645.01.T01 AT4G22880 32.776 299 191 7 38 328 46 342 9.03e-47 163
MsG0880045645.01.T01 AT4G22880 32.776 299 191 7 38 328 46 342 9.03e-47 163
MsG0880045645.01.T01 AT4G22880 32.776 299 191 7 38 328 46 342 9.03e-47 163
MsG0880045645.01.T01 AT1G04380 35.424 271 162 6 39 305 45 306 1.81e-46 162
MsG0880045645.01.T01 AT1G03410 36.330 267 155 6 39 297 57 316 4.29e-46 161
MsG0880045645.01.T01 AT5G05600 35.573 253 156 5 15 262 37 287 5.75e-46 159
MsG0880045645.01.T01 AT1G03410 36.330 267 155 6 39 297 94 353 8.32e-46 161
MsG0880045645.01.T01 AT1G78550 35.169 236 150 3 71 305 6 239 1.43e-45 157
MsG0880045645.01.T01 AT4G25420 32.013 303 195 4 8 303 32 330 1.62e-45 160
MsG0880045645.01.T01 AT1G04350 33.564 289 171 10 25 305 46 321 3.47e-45 159
MsG0880045645.01.T01 AT1G15550 32.550 298 183 6 39 329 57 343 4.44e-45 158
MsG0880045645.01.T01 AT2G44800 32.734 278 180 6 20 294 31 304 4.62e-45 158
MsG0880045645.01.T01 AT3G19010 34.615 260 153 5 16 261 4 260 5.40e-45 156
MsG0880045645.01.T01 AT5G59530 33.818 275 169 6 38 305 57 325 9.07e-45 158
MsG0880045645.01.T01 AT3G12900 35.094 265 163 5 42 304 59 316 1.02e-44 157
MsG0880045645.01.T01 AT5G43450 34.559 272 164 7 39 305 61 323 1.54e-44 157
MsG0880045645.01.T01 AT3G19010 31.250 304 162 6 16 305 4 274 1.64e-44 156
MsG0880045645.01.T01 AT1G60980 32.500 320 191 7 12 315 32 342 1.80e-44 157
MsG0880045645.01.T01 AT1G06620 32.143 308 175 6 38 327 61 352 1.10e-43 155
MsG0880045645.01.T01 AT4G21690 32.131 305 184 6 10 304 23 314 2.41e-43 154
MsG0880045645.01.T01 AT5G63590 32.069 290 171 6 36 313 11 286 2.42e-43 152
MsG0880045645.01.T01 AT3G55970 33.852 257 158 6 16 262 25 279 7.85e-43 151
MsG0880045645.01.T01 AT5G63600 32.740 281 168 7 38 312 32 297 8.13e-43 152
MsG0880045645.01.T01 AT1G77330 32.982 285 166 9 39 312 3 273 1.68e-42 150
MsG0880045645.01.T01 AT1G05010 34.074 270 162 8 39 303 4 262 2.82e-42 150
MsG0880045645.01.T01 AT5G07200 32.082 293 186 5 20 303 41 329 8.29e-42 150
MsG0880045645.01.T01 AT5G51810 31.511 311 182 5 8 303 34 328 9.39e-42 150
MsG0880045645.01.T01 AT5G63600 32.624 282 168 8 38 312 32 298 1.20e-41 149
MsG0880045645.01.T01 AT1G03400 37.054 224 126 4 39 261 56 265 2.47e-41 149
MsG0880045645.01.T01 AT1G62380 32.841 271 165 8 38 303 6 264 4.76e-41 147
MsG0880045645.01.T01 AT5G20550 31.095 283 177 7 34 304 35 311 4.78e-40 145
MsG0880045645.01.T01 AT5G43440 34.821 224 139 4 39 261 62 279 5.88e-40 143
MsG0880045645.01.T01 AT1G06645 34.457 267 151 7 49 302 81 336 7.03e-40 145
MsG0880045645.01.T01 AT5G07480 30.201 298 184 10 11 294 16 303 9.05e-40 144
MsG0880045645.01.T01 AT1G80340 32.468 308 187 8 39 336 50 346 9.39e-40 144
MsG0880045645.01.T01 AT3G61400 35.094 265 153 8 39 292 60 316 1.14e-39 144
MsG0880045645.01.T01 AT5G54000 32.342 269 178 4 38 304 45 311 1.23e-39 144
MsG0880045645.01.T01 AT1G80330 30.743 296 180 8 27 309 35 318 1.39e-39 144
MsG0880045645.01.T01 AT5G59540 33.921 227 141 3 38 261 60 280 1.85e-39 142
MsG0880045645.01.T01 AT5G20400 31.365 271 178 5 38 304 44 310 4.12e-39 142
MsG0880045645.01.T01 AT2G30840 32.727 275 169 9 39 305 57 323 5.88e-39 142
MsG0880045645.01.T01 AT1G12010 31.111 270 171 7 38 303 6 264 6.79e-39 141
MsG0880045645.01.T01 AT2G30830 33.091 275 169 8 38 305 53 319 8.29e-39 142
MsG0880045645.01.T01 AT1G49390 31.852 270 176 5 38 303 44 309 9.28e-39 141
MsG0880045645.01.T01 AT1G06650 32.819 259 161 6 39 292 64 314 9.75e-39 142
MsG0880045645.01.T01 AT5G63595 30.208 288 166 7 21 301 3 262 1.96e-38 139
MsG0880045645.01.T01 AT1G06640 32.601 273 172 8 39 305 64 330 7.50e-38 139
MsG0880045645.01.T01 AT1G04380 35.714 224 134 4 39 261 45 259 8.10e-38 137
MsG0880045645.01.T01 AT5G12270 30.847 295 191 5 15 304 32 318 9.19e-38 139
MsG0880045645.01.T01 AT1G06620 35.000 240 127 5 33 261 58 279 2.15e-37 136
MsG0880045645.01.T01 AT5G43450 35.556 225 134 5 39 261 61 276 1.09e-36 134
MsG0880045645.01.T01 AT2G30840 32.364 275 164 10 39 305 57 317 7.78e-36 134
MsG0880045645.01.T01 AT2G25450 31.502 273 175 6 39 305 55 321 4.03e-35 132
MsG0880045645.01.T01 AT4G25420 29.885 261 172 4 8 261 32 288 4.77e-35 130
MsG0880045645.01.T01 AT2G19590 32.721 272 163 10 38 303 10 267 8.16e-35 130
MsG0880045645.01.T01 AT1G44090 32.234 273 176 5 38 303 62 332 2.95e-34 130
MsG0880045645.01.T01 AT4G21200 31.579 266 170 5 38 301 41 296 3.01e-34 129
MsG0880045645.01.T01 AT5G54000 32.618 233 153 4 74 304 1 231 3.07e-34 127
MsG0880045645.01.T01 AT3G61400 36.052 233 131 7 39 261 60 284 7.42e-34 127
MsG0880045645.01.T01 AT1G06650 33.921 227 138 5 39 261 64 282 1.30e-33 127
MsG0880045645.01.T01 AT1G49390 32.051 234 151 5 74 303 1 230 1.87e-33 125
MsG0880045645.01.T01 AT5G43935 28.758 306 181 9 35 332 15 291 4.02e-33 125
MsG0880045645.01.T01 AT1G06640 34.513 226 138 6 39 261 64 282 5.77e-33 124
MsG0880045645.01.T01 AT1G06640 33.778 225 141 5 39 261 64 282 8.73e-33 125
MsG0880045645.01.T01 AT2G30840 33.333 228 139 6 39 261 57 276 3.93e-32 123
MsG0880045645.01.T01 AT5G51810 29.119 261 170 4 8 261 34 286 8.14e-32 122
MsG0880045645.01.T01 AT4G25310 28.972 321 193 8 15 333 28 315 1.18e-31 122
MsG0880045645.01.T01 AT1G30040 28.102 274 185 6 39 304 23 292 1.72e-31 122
MsG0880045645.01.T01 AT1G47990 29.338 317 190 10 38 337 14 313 1.94e-31 121
MsG0880045645.01.T01 AT5G63580 34.222 225 139 3 39 261 19 236 2.00e-31 119
MsG0880045645.01.T01 AT5G63580 34.222 225 139 3 39 261 19 236 2.79e-31 119
MsG0880045645.01.T01 AT1G78440 26.471 306 198 10 61 349 32 327 1.88e-30 119
MsG0880045645.01.T01 AT3G50210 30.108 279 174 7 45 306 24 298 2.84e-29 115
MsG0880045645.01.T01 AT3G50210 30.108 279 174 7 45 306 24 298 2.84e-29 115
MsG0880045645.01.T01 AT3G50210 30.108 279 174 7 45 306 24 298 2.84e-29 115
MsG0880045645.01.T01 AT2G19590 33.054 239 142 9 71 303 26 252 8.06e-28 111
MsG0880045645.01.T01 AT4G25300 33.333 183 117 5 154 333 72 252 1.18e-27 109
MsG0880045645.01.T01 AT3G49630 28.767 292 188 7 34 306 4 294 2.86e-27 110
MsG0880045645.01.T01 AT3G49630 29.771 262 172 5 56 306 30 290 6.98e-27 109
MsG0880045645.01.T01 AT5G07480 31.319 182 116 5 123 298 20 198 1.72e-26 106
MsG0880045645.01.T01 AT2G34555 28.205 273 177 7 39 304 27 287 2.75e-26 107
MsG0880045645.01.T01 AT3G49620 29.771 262 172 5 56 306 59 319 1.93e-25 105
MsG0880045645.01.T01 AT1G50960 26.715 277 188 5 38 307 39 307 2.31e-25 105
MsG0880045645.01.T01 AT1G14130 27.389 314 206 7 39 346 9 306 3.72e-25 103
MsG0880045645.01.T01 AT1G14120 26.852 324 205 7 39 351 8 310 3.43e-24 101
MsG0880045645.01.T01 AT1G14120 26.852 324 205 7 39 351 8 310 3.43e-24 101
MsG0880045645.01.T01 AT1G14120 26.852 324 205 7 39 351 8 310 3.43e-24 101
MsG0880045645.01.T01 AT1G02400 26.059 307 189 10 54 338 34 324 1.26e-22 97.4
MsG0880045645.01.T01 AT1G30040 27.706 231 155 6 39 261 23 249 3.21e-22 95.1
MsG0880045645.01.T01 AT4G23340 30.290 241 145 10 64 292 30 259 5.41e-22 95.5
MsG0880045645.01.T01 AT3G46490 27.018 285 182 6 39 301 12 292 1.82e-21 94.4
MsG0880045645.01.T01 AT3G46500 25.240 313 217 7 36 334 9 318 8.48e-21 92.4
MsG0880045645.01.T01 AT5G51310 26.848 257 160 7 55 292 16 263 3.33e-20 90.5
MsG0880045645.01.T01 AT5G58660 25.172 290 178 9 39 301 34 311 1.20e-19 89.4
MsG0880045645.01.T01 AT3G46490 26.642 274 175 6 39 290 12 281 3.66e-19 87.4
MsG0880045645.01.T01 AT3G47190 26.230 305 184 10 10 299 14 292 1.73e-18 85.9
MsG0880045645.01.T01 AT3G50210 32.934 167 107 2 145 306 50 216 2.02e-18 84.3
MsG0880045645.01.T01 AT3G46500 25.547 274 187 7 36 295 9 279 2.83e-18 84.7
MsG0880045645.01.T01 AT4G16765 31.977 172 107 6 139 301 42 212 3.90e-18 83.2
MsG0880045645.01.T01 AT4G16765 31.977 172 107 6 139 301 42 212 3.90e-18 83.2
MsG0880045645.01.T01 AT4G16765 31.977 172 107 6 139 301 42 212 3.90e-18 83.2
MsG0880045645.01.T01 AT4G16765 31.977 172 107 6 139 301 42 212 3.93e-18 83.2
MsG0880045645.01.T01 AT3G49630 32.515 163 108 2 145 306 60 221 3.95e-18 83.6
MsG0880045645.01.T01 AT1G35190 27.465 284 155 9 41 301 9 264 5.65e-18 84.0
MsG0880045645.01.T01 AT1G35190 28.276 290 168 9 41 301 9 287 3.37e-17 82.0
MsG0880045645.01.T01 AT4G23340 40.206 97 54 2 199 292 46 141 4.36e-15 73.9
MsG0880045645.01.T01 AT1G02400 26.471 238 139 8 54 271 34 255 4.55e-15 74.7
MsG0880045645.01.T01 AT1G52820 25.207 242 163 6 61 295 36 266 2.35e-14 73.6
MsG0880045645.01.T01 AT4G16765 32.168 143 88 5 139 272 42 184 2.61e-14 71.2
MsG0880045645.01.T01 AT4G16765 39.175 97 55 2 212 305 75 170 5.25e-13 67.8
MsG0880045645.01.T01 AT3G46500 39.560 91 51 2 214 301 60 149 6.36e-11 61.6

Find 104 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGACATTTAAACACAATTT+AGG 0.131365 8:+62103150 None:intergenic
GAATAGTCTCTTTGTCTAAT+TGG 0.151625 8:+62104706 None:intergenic
TTGCATCTGGTGCTGGATTT+TGG 0.194340 8:+62103405 None:intergenic
AGGTCTGGTTGAGGGCATTT+TGG 0.242993 8:+62104508 None:intergenic
ATTCCAATCATTTCTCTTGA+TGG 0.262391 8:-62105653 MsG0880045645.01.T01:CDS
GGACATTTAAACACAATTTA+GGG 0.269663 8:+62103151 None:intergenic
TTCCATCCTTCTGGCTTGTC+TGG 0.271701 8:+62104676 None:intergenic
GTTACCTCTTTCCATCCTTC+TGG 0.281740 8:+62104667 None:intergenic
TGACATGTCTGGTGGTAAAA+AGG 0.287392 8:-62105456 MsG0880045645.01.T01:CDS
AACAAAAGCATGTGTTGATA+TGG 0.290834 8:-62104557 MsG0880045645.01.T01:CDS
CCATGTCTTACCATTATCTT+TGG 0.292975 8:+62104405 None:intergenic
ATCTTCTTCGCGAACAAAAC+TGG 0.293379 8:+62105715 None:intergenic
CTTAACACATATTGACAAAA+AGG 0.308347 8:+62103130 None:intergenic
AATAGTCTCTTTGTCTAATT+GGG 0.329375 8:+62104707 None:intergenic
CATTTGATCGTGTATCTTAG+AGG 0.339858 8:-62103107 MsG0880045645.01.T01:three_prime_UTR
TTGTAGAAGCTTGTGAGAAC+TGG 0.353113 8:-62105586 MsG0880045645.01.T01:CDS
AAGTTGTTGTAAGCAACTTT+TGG 0.353627 8:+62105686 None:intergenic
GGCGGTGTTTGTATGAGGTT+TGG 0.357242 8:+62105825 None:intergenic
ATCTTTCAAGTTGTTGATCA+TGG 0.367529 8:-62105560 MsG0880045645.01.T01:CDS
CATAGTCTCTAGTCATCTTC+AGG 0.377337 8:-62105426 MsG0880045645.01.T01:intron
CTTCAAGCTACCAAAGATAA+TGG 0.377807 8:-62104415 MsG0880045645.01.T01:CDS
TACATTTCAGCAAAAGTGAT+TGG 0.382508 8:+62103332 None:intergenic
CGCGAACAAAACTGGATTCA+AGG 0.385796 8:+62105723 None:intergenic
ACAATAAATCATTATTGATC+TGG 0.389083 8:+62103176 None:intergenic
GCGGTGTTTGTATGAGGTTT+GGG 0.411181 8:+62105826 None:intergenic
CTGAAACGACACACTGATCC+TGG 0.418531 8:-62104475 MsG0880045645.01.T01:CDS
GGAATGTTGCTATGGATAAA+CGG 0.425661 8:+62103426 None:intergenic
GCTAAGGCGGTGTTTGTATG+AGG 0.427075 8:+62105820 None:intergenic
ACAACAAAAGCACCTTCAAC+TGG 0.441546 8:+62104370 None:intergenic
TAAATAGAGTGATGACTTTG+AGG 0.445962 8:+62105863 None:intergenic
AGGGAGAAGCTGTGAAGGAT+TGG 0.451926 8:-62104756 MsG0880045645.01.T01:CDS
AGAAGTGTTATCTGAGGCTA+TGG 0.453688 8:-62104599 MsG0880045645.01.T01:CDS
GAAGATATAGAATAGAAGTT+AGG 0.455793 8:+62105906 None:intergenic
GTCGTTTCAGTCCAAGAGTT+AGG 0.461473 8:+62104488 None:intergenic
TAGCTTGAAGACCACCTACT+TGG 0.464820 8:+62104428 None:intergenic
GGGATGGATGAGTAAGAGAA+TGG 0.465495 8:+62105884 None:intergenic
AAAGGGTACACAGTTGCATC+TGG 0.468214 8:+62103392 None:intergenic
TCATTATTGATCTGGAAACT+AGG 0.468946 8:+62103184 None:intergenic
TTCAGTCCAAGAGTTAGGTC+TGG 0.473884 8:+62104493 None:intergenic
TACACAGTTGCATCTGGTGC+TGG 0.475425 8:+62103398 None:intergenic
TCAAACCGGAGCTTCTCTTC+CGG 0.476637 8:+62105476 None:intergenic
AAGCTCCGGTTTGACATGTC+TGG 0.480521 8:-62105467 MsG0880045645.01.T01:CDS
ATTCCATCAAGAGAAATGAT+TGG 0.481655 8:+62105650 None:intergenic
AAGAATCTCATTCAAAGGCT+TGG 0.489138 8:+62103214 None:intergenic
GGTGCCATTGTTTGCAAGGA+AGG 0.490887 8:+62105782 None:intergenic
CTCTTTGAAAAGTGAGGGAG+TGG 0.493843 8:+62102949 None:intergenic
TCTCCATCTCTAATCTTCAA+AGG 0.494530 8:+62103374 None:intergenic
CTCCATCTCTAATCTTCAAA+GGG 0.500771 8:+62103375 None:intergenic
TAAGCAAGAATCTCATTCAA+AGG 0.506678 8:+62103209 None:intergenic
GAAGTGTTATCTGAGGCTAT+GGG 0.514714 8:-62104598 MsG0880045645.01.T01:CDS
TACCACCAGACATGTCAAAC+CGG 0.517838 8:+62105462 None:intergenic
AGTTGGAATTCACCACTGCT+TGG 0.519276 8:+62103453 None:intergenic
TGTAGAAGCTTGTGAGAACT+GGG 0.520077 8:-62105585 MsG0880045645.01.T01:CDS
AAATAGAGTGATGACTTTGA+GGG 0.524657 8:+62105864 None:intergenic
TTAGACAAAGAGACTATTCA+AGG 0.527004 8:-62104702 MsG0880045645.01.T01:CDS
CCTCAACCAGACCTAACTCT+TGG 0.529819 8:-62104499 MsG0880045645.01.T01:CDS
TGCCGCCGGAAGAGAAGCTC+CGG 0.535053 8:-62105481 MsG0880045645.01.T01:CDS
GCAAGGACCTTGAGATTGCT+AGG 0.538193 8:-62103295 MsG0880045645.01.T01:CDS
ATCACTGTTCAACCAGTTGA+AGG 0.539071 8:-62104382 MsG0880045645.01.T01:CDS
CCAAGAGTTAGGTCTGGTTG+AGG 0.541014 8:+62104499 None:intergenic
TATGGATAAACGGCTATAGT+TGG 0.541670 8:+62103436 None:intergenic
AGCAATAGAGTAATGGTGCC+AGG 0.542617 8:+62104457 None:intergenic
TACCCTTTGAAGATTAGAGA+TGG 0.545506 8:-62103377 MsG0880045645.01.T01:CDS
TGTTGCATATCTCTTCTCTA+CGG 0.548202 8:+62105612 None:intergenic
GATGGAATCGACGACGTTGG+TGG 0.552023 8:-62105635 MsG0880045645.01.T01:CDS
GTTGTTAATCTTGGAGACCA+TGG 0.552923 8:-62104352 MsG0880045645.01.T01:CDS
AGCTGGTGCCATTGTTTGCA+AGG 0.558609 8:+62105778 None:intergenic
CAAGAGTTAGGTCTGGTTGA+GGG 0.565921 8:+62104500 None:intergenic
TAGGATGAAGAAGCTGGCTA+AGG 0.567974 8:-62103276 MsG0880045645.01.T01:CDS
TACATGCAGTATCTAAGTAA+TGG 0.568393 8:-62103497 MsG0880045645.01.T01:intron
CTTGATGGAATCGACGACGT+TGG 0.574644 8:-62105638 MsG0880045645.01.T01:CDS
AATCACTCTTTGAAAAGTGA+GGG 0.574864 8:+62102944 None:intergenic
TATTCAGGGAGAAGCTGTGA+AGG 0.576616 8:-62104761 MsG0880045645.01.T01:intron
GCAACCTTCCTTGCAAACAA+TGG 0.577975 8:-62105786 MsG0880045645.01.T01:exon
GCGAACAAAACTGGATTCAA+GGG 0.579362 8:+62105724 None:intergenic
GGCCAGACAAGCCAGAAGGA+TGG 0.580441 8:-62104678 MsG0880045645.01.T01:CDS
AGATGGAGATAAATCTGTGA+TGG 0.586118 8:-62103360 MsG0880045645.01.T01:CDS
GATTGCTAGGATGAAGAAGC+TGG 0.588175 8:-62103282 MsG0880045645.01.T01:CDS
GACATTTAAACACAATTTAG+GGG 0.591989 8:+62103152 None:intergenic
TCAAGTTGTTGATCATGGTG+TGG 0.594548 8:-62105555 MsG0880045645.01.T01:CDS
GTCTTGAAGCAATAGAGTAA+TGG 0.595794 8:+62104450 None:intergenic
CAAGCCAGAAGGATGGAAAG+AGG 0.596133 8:-62104671 MsG0880045645.01.T01:CDS
CCAAAGATAATGGTAAGACA+TGG 0.603130 8:-62104405 MsG0880045645.01.T01:CDS
GAATCACTCTTTGAAAAGTG+AGG 0.606267 8:+62102943 None:intergenic
AGGTTTCTTTGATTTGCCGC+CGG 0.609021 8:-62105495 MsG0880045645.01.T01:CDS
AGAACTTAGGGACTTAGAGA+AGG 0.612341 8:-62103249 MsG0880045645.01.T01:CDS
AGATAGGTGAGAGTTTGAGC+TGG 0.614925 8:+62105761 None:intergenic
ATTGTTTGCAAGGAAGGTTG+CGG 0.617794 8:+62105788 None:intergenic
AGAGTGATGACTTTGAGGGA+TGG 0.618515 8:+62105868 None:intergenic
TCTTCATCCTAGCAATCTCA+AGG 0.621342 8:+62103288 None:intergenic
TGCAGTATCTAAGTAATGGA+CGG 0.627672 8:-62103493 MsG0880045645.01.T01:intron
CTCCGGTTTGACATGTCTGG+TGG 0.640603 8:-62105464 MsG0880045645.01.T01:CDS
GTATAGGAGGAAAATGAGCA+AGG 0.641286 8:-62103312 MsG0880045645.01.T01:CDS
AGGTGGCCAGACAAGCCAGA+AGG 0.645383 8:-62104682 MsG0880045645.01.T01:CDS
GCTATTAGAAGTGTTATCTG+AGG 0.649643 8:-62104605 MsG0880045645.01.T01:CDS
AAGTGTTATCTGAGGCTATG+GGG 0.652343 8:-62104597 MsG0880045645.01.T01:CDS
CTTAGAGAAGGCAAAACTTG+AGG 0.655723 8:-62103237 MsG0880045645.01.T01:CDS
AACCGGAGCTTCTCTTCCGG+CGG 0.663746 8:+62105479 None:intergenic
AAATGCTGATCACCAAGCAG+TGG 0.664697 8:-62103465 MsG0880045645.01.T01:CDS
CTATTGCTTCAAGACCAAGT+AGG 0.668996 8:-62104442 MsG0880045645.01.T01:CDS
TTGCTTCAAGACCAAGTAGG+TGG 0.677836 8:-62104439 MsG0880045645.01.T01:CDS
AAAGAGTACTCACATGACCA+TGG 0.701797 8:+62104335 None:intergenic
GTAGAAGCTTGTGAGAACTG+GGG 0.730551 8:-62105584 MsG0880045645.01.T01:CDS
GACAAAGAGACTATTCAAGG+TGG 0.739154 8:-62104699 MsG0880045645.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAAATTAATTTAT+TGG - Chr8:62104835-62104854 MsG0880045645.01.T01:intron 0.0%
!! TTAAAATAAATTATATTATA+AGG + Chr8:62104587-62104606 None:intergenic 0.0%
!!! AATTTTTTTTTAATTTTTTT+GGG + Chr8:62104828-62104847 None:intergenic 0.0%
!!! TAATTTTTTTTTAATTTTTT+TGG + Chr8:62104829-62104848 None:intergenic 0.0%
!! AAATAAATTATATTATAAGG+TGG + Chr8:62104584-62104603 None:intergenic 10.0%
!! ATTCTATCATAAATTAATAT+AGG + Chr8:62104764-62104783 None:intergenic 10.0%
!! CAATATATTCAAAATAAAAA+AGG + Chr8:62105909-62105928 None:intergenic 10.0%
!! TGTTAAAATTTATAATGATT+TGG + Chr8:62103575-62103594 None:intergenic 10.0%
!!! AAATATAAATTTTATAACAC+GGG - Chr8:62105779-62105798 MsG0880045645.01.T01:exon 10.0%
!!! AAATCTAGTTAATTTTTTTT+GGG + Chr8:62104864-62104883 None:intergenic 10.0%
!!! CAAATATAAATTTTATAACA+CGG - Chr8:62105778-62105797 MsG0880045645.01.T01:exon 10.0%
!!! TAAAAGTTTATTTTTTAAGA+TGG - Chr8:62104940-62104959 MsG0880045645.01.T01:intron 10.0%
!!! TAAATCTAGTTAATTTTTTT+TGG + Chr8:62104865-62104884 None:intergenic 10.0%
!! TTTCTTAAAACAAAAAACAT+GGG - Chr8:62105807-62105826 MsG0880045645.01.T01:five_prime_UTR 15.0%
!!! ATACTAACTTTTATTATTCA+GGG - Chr8:62104018-62104037 MsG0880045645.01.T01:intron 15.0%
!!! GATTATGTTGATTAAATTAT+AGG + Chr8:62104677-62104696 None:intergenic 15.0%
!!! TATACTAACTTTTATTATTC+AGG - Chr8:62104017-62104036 MsG0880045645.01.T01:intron 15.0%
!!! TCTAAAATAAAAATCACATA+CGG - Chr8:62103917-62103936 MsG0880045645.01.T01:intron 15.0%
!!! TTTTCTTAAAACAAAAAACA+TGG - Chr8:62105806-62105825 MsG0880045645.01.T01:five_prime_UTR 15.0%
!!! TTTTTTGACTAAATCAATAT+AGG + Chr8:62104733-62104752 None:intergenic 15.0%
!! AAATATCATATCTTCAACAA+AGG + Chr8:62103624-62103643 None:intergenic 20.0%
!! ACAATAAATCATTATTGATC+TGG + Chr8:62105620-62105639 None:intergenic 20.0%
!! AGTGTAAAATAATAGTGTAA+AGG + Chr8:62103409-62103428 None:intergenic 20.0%
!! CAATTATTCATACCAAAATA+GGG + Chr8:62103454-62103473 None:intergenic 20.0%
!! GTGTAAAATAATAGTGTAAA+GGG + Chr8:62103408-62103427 None:intergenic 20.0%
!! TATTTATACGCGATTTAATT+TGG - Chr8:62103960-62103979 MsG0880045645.01.T01:intron 20.0%
!!! CAAATGACATTTTTTCTATT+GGG + Chr8:62105752-62105771 None:intergenic 20.0%
!!! TAGGTATTGTTTACTTATTT+AGG - Chr8:62105089-62105108 MsG0880045645.01.T01:intron 20.0%
! AATAGTCTCTTTGTCTAATT+GGG + Chr8:62104089-62104108 None:intergenic 25.0%
! AGAAAAAAGGGAAAATAACA+AGG + Chr8:62104485-62104504 None:intergenic 25.0%
! AGGACATTTAAACACAATTT+AGG + Chr8:62105646-62105665 None:intergenic 25.0%
! ATTATATTATAAGGTGGAAG+TGG + Chr8:62104578-62104597 None:intergenic 25.0%
! ATTATTTCACACTCTTTGAA+TGG + Chr8:62104532-62104551 None:intergenic 25.0%
! CCAATTATTCATACCAAAAT+AGG + Chr8:62103455-62103474 None:intergenic 25.0%
! CTTAACACATATTGACAAAA+AGG + Chr8:62105666-62105685 None:intergenic 25.0%
! GAAGATATAGAATAGAAGTT+AGG + Chr8:62102890-62102909 None:intergenic 25.0%
! GACATTTAAACACAATTTAG+GGG + Chr8:62105644-62105663 None:intergenic 25.0%
! GGACATTTAAACACAATTTA+GGG + Chr8:62105645-62105664 None:intergenic 25.0%
! TACTTATTTAGGCAAATCTT+GGG - Chr8:62105100-62105119 MsG0880045645.01.T01:intron 25.0%
! TAGACAATTTAATGAGTCAA+AGG - Chr8:62103812-62103831 MsG0880045645.01.T01:intron 25.0%
! TTACTTATTTAGGCAAATCT+TGG - Chr8:62105099-62105118 MsG0880045645.01.T01:intron 25.0%
! TTGTAGAGAGTAACAATTAA+AGG - Chr8:62103847-62103866 MsG0880045645.01.T01:intron 25.0%
!! AAACATGGGAGTTTTTATAT+TGG - Chr8:62105821-62105840 MsG0880045645.01.T01:five_prime_UTR 25.0%
!! AAATCTTGGGAAATGATTTT+AGG - Chr8:62105113-62105132 MsG0880045645.01.T01:intron 25.0%
!! AGTGACATTATATTTTCAGA+TGG + Chr8:62105062-62105081 None:intergenic 25.0%
!!! CCTATTTTGGTATGAATAAT+TGG - Chr8:62103452-62103471 MsG0880045645.01.T01:CDS 25.0%
!!! GCAAATGACATTTTTTCTAT+TGG + Chr8:62105753-62105772 None:intergenic 25.0%
!!! TTAATTTTTTTGGGTATGAC+AGG + Chr8:62104819-62104838 None:intergenic 25.0%
!!! TTTAGAGACCTGTTATTTTA+AGG - Chr8:62105145-62105164 MsG0880045645.01.T01:intron 25.0%
AAAAAGTGGTGACAGAAAAA+AGG + Chr8:62104498-62104517 None:intergenic 30.0%
AAAAGTGGTGACAGAAAAAA+GGG + Chr8:62104497-62104516 None:intergenic 30.0%
AAATAGAGTGATGACTTTGA+GGG + Chr8:62102932-62102951 None:intergenic 30.0%
AGTGTAAAGGGAAGAAAATT+TGG + Chr8:62103396-62103415 None:intergenic 30.0%
ATATTTGACGTTTGACTAGT+AGG - Chr8:62103638-62103657 MsG0880045645.01.T01:intron 30.0%
ATGTCTAATAAAGCCTTCAT+GGG + Chr8:62104967-62104986 None:intergenic 30.0%
ATTCCAATCATTTCTCTTGA+TGG - Chr8:62103140-62103159 MsG0880045645.01.T01:three_prime_UTR 30.0%
ATTCCATCAAGAGAAATGAT+TGG + Chr8:62103146-62103165 None:intergenic 30.0%
CAAATAAGACTAGGTGAATA+TGG - Chr8:62105173-62105192 MsG0880045645.01.T01:intron 30.0%
GAATAGTCTCTTTGTCTAAT+TGG + Chr8:62104090-62104109 None:intergenic 30.0%
TAAATAGAGTGATGACTTTG+AGG + Chr8:62102933-62102952 None:intergenic 30.0%
TAAGCAAGAATCTCATTCAA+AGG + Chr8:62105587-62105606 None:intergenic 30.0%
TACATGCAGTATCTAAGTAA+TGG - Chr8:62105296-62105315 MsG0880045645.01.T01:intron 30.0%
TACATTTCAGCAAAAGTGAT+TGG + Chr8:62105464-62105483 None:intergenic 30.0%
TATAATGTCACTCTCACATT+AGG - Chr8:62105070-62105089 MsG0880045645.01.T01:intron 30.0%
TATGTCTAATAAAGCCTTCA+TGG + Chr8:62104968-62104987 None:intergenic 30.0%
TCACCATGCAGTAAAAAAAA+AGG + Chr8:62105243-62105262 None:intergenic 30.0%
TCATTATTGATCTGGAAACT+AGG + Chr8:62105612-62105631 None:intergenic 30.0%
TGCACAAGTTAGTTATCATA+TGG - Chr8:62103661-62103680 MsG0880045645.01.T01:intron 30.0%
TTAGACAAAGAGACTATTCA+AGG - Chr8:62104091-62104110 MsG0880045645.01.T01:intron 30.0%
TTGGTGTACCTTAAAATAAC+AGG + Chr8:62105156-62105175 None:intergenic 30.0%
! AACAAAAGCATGTGTTGATA+TGG - Chr8:62104236-62104255 MsG0880045645.01.T01:intron 30.0%
! AAGTTGTTGTAAGCAACTTT+TGG + Chr8:62103110-62103129 None:intergenic 30.0%
! AATCACTCTTTGAAAAGTGA+GGG + Chr8:62105852-62105871 None:intergenic 30.0%
! ATCATTTAACTGCCCTATTT+TGG - Chr8:62103439-62103458 MsG0880045645.01.T01:CDS 30.0%
! TTTACTCGAAAGTCTTATAG+CGG + Chr8:62103703-62103722 None:intergenic 30.0%
!! ATCTTTCAAGTTGTTGATCA+TGG - Chr8:62103233-62103252 MsG0880045645.01.T01:CDS 30.0%
!! CATATTCACCTAGTCTTATT+TGG + Chr8:62105175-62105194 None:intergenic 30.0%
!! CGCGATTTAATTTGGAAATA+TGG - Chr8:62103968-62103987 MsG0880045645.01.T01:intron 30.0%
!! TCACTTTTGCTGAAATGTAT+AGG - Chr8:62105465-62105484 MsG0880045645.01.T01:CDS 30.0%
!!! TCACCTTTTTTTTTACTGCA+TGG - Chr8:62105237-62105256 MsG0880045645.01.T01:intron 30.0%
AAATCACATACGGTTCAGTT+CGG - Chr8:62103927-62103946 MsG0880045645.01.T01:intron 35.0%
AAGAATCTCATTCAAAGGCT+TGG + Chr8:62105582-62105601 None:intergenic 35.0%
AAGGTACACCAAATAAGACT+AGG - Chr8:62105164-62105183 MsG0880045645.01.T01:intron 35.0%
AGATGGAGATAAATCTGTGA+TGG - Chr8:62105433-62105452 MsG0880045645.01.T01:CDS 35.0%
CATTTGATCGTGTATCTTAG+AGG - Chr8:62105686-62105705 MsG0880045645.01.T01:CDS 35.0%
CCATGTCTTACCATTATCTT+TGG + Chr8:62104391-62104410 None:intergenic 35.0%
CTCCATCTCTAATCTTCAAA+GGG + Chr8:62105421-62105440 None:intergenic 35.0%
CTTCAAGCTACCAAAGATAA+TGG - Chr8:62104378-62104397 MsG0880045645.01.T01:CDS 35.0%
CTTTGTAGTATACAGTGATG+TGG + Chr8:62105001-62105020 None:intergenic 35.0%
GGAATGTTGCTATGGATAAA+CGG + Chr8:62105370-62105389 None:intergenic 35.0%
GGCTAAGGAAAAAGAACTTA+GGG - Chr8:62105532-62105551 MsG0880045645.01.T01:CDS 35.0%
GTCTTGAAGCAATAGAGTAA+TGG + Chr8:62104346-62104365 None:intergenic 35.0%
TATGGATAAACGGCTATAGT+TGG + Chr8:62105360-62105379 None:intergenic 35.0%
TCTCCATCTCTAATCTTCAA+AGG + Chr8:62105422-62105441 None:intergenic 35.0%
TGACAGGTGAATCAATAACA+AGG + Chr8:62104803-62104822 None:intergenic 35.0%
TGGCTAAGGAAAAAGAACTT+AGG - Chr8:62105531-62105550 MsG0880045645.01.T01:CDS 35.0%
TGTTGCATATCTCTTCTCTA+CGG + Chr8:62103184-62103203 None:intergenic 35.0%
! CCAAAGATAATGGTAAGACA+TGG - Chr8:62104388-62104407 MsG0880045645.01.T01:CDS 35.0%
! CTTTTGCTGAAATGTATAGG+AGG - Chr8:62105468-62105487 MsG0880045645.01.T01:CDS 35.0%
! GAATCACTCTTTGAAAAGTG+AGG + Chr8:62105853-62105872 None:intergenic 35.0%
! TACCCTTTGAAGATTAGAGA+TGG - Chr8:62105416-62105435 MsG0880045645.01.T01:intron 35.0%
! TGCAGTATCTAAGTAATGGA+CGG - Chr8:62105300-62105319 MsG0880045645.01.T01:intron 35.0%
!! GCTATTAGAAGTGTTATCTG+AGG - Chr8:62104188-62104207 MsG0880045645.01.T01:intron 35.0%
!! TGATTTGTTTATGTGTTGCG+TGG - Chr8:62105273-62105292 MsG0880045645.01.T01:intron 35.0%
!!! GGTGCTTTTGTTGTTAATCT+TGG - Chr8:62104432-62104451 MsG0880045645.01.T01:CDS 35.0%
!!! TGGATTTTGGAATGTTGCTA+TGG + Chr8:62105378-62105397 None:intergenic 35.0%
!!! TTTTTAAGATGGACCCATGA+AGG - Chr8:62104951-62104970 MsG0880045645.01.T01:intron 35.0%
AGAACTTAGGGACTTAGAGA+AGG - Chr8:62105544-62105563 MsG0880045645.01.T01:CDS 40.0%
ATCACTGTTCAACCAGTTGA+AGG - Chr8:62104411-62104430 MsG0880045645.01.T01:CDS 40.0%
ATCTTCTTCGCGAACAAAAC+TGG + Chr8:62103081-62103100 None:intergenic 40.0%
ATTGTTTGCAAGGAAGGTTG+CGG + Chr8:62103008-62103027 None:intergenic 40.0%
CATAGTCTCTAGTCATCTTC+AGG - Chr8:62103367-62103386 MsG0880045645.01.T01:CDS 40.0%
CTATTGCTTCAAGACCAAGT+AGG - Chr8:62104351-62104370 MsG0880045645.01.T01:CDS 40.0%
CTTAGAGAAGGCAAAACTTG+AGG - Chr8:62105556-62105575 MsG0880045645.01.T01:CDS 40.0%
GACAAAGAGACTATTCAAGG+TGG - Chr8:62104094-62104113 MsG0880045645.01.T01:intron 40.0%
GACATGTCTGGTGGTAAAAA+GGG - Chr8:62103338-62103357 MsG0880045645.01.T01:CDS 40.0%
GCGAACAAAACTGGATTCAA+GGG + Chr8:62103072-62103091 None:intergenic 40.0%
GTATAGGAGGAAAATGAGCA+AGG - Chr8:62105481-62105500 MsG0880045645.01.T01:CDS 40.0%
GTTGTTAATCTTGGAGACCA+TGG - Chr8:62104441-62104460 MsG0880045645.01.T01:CDS 40.0%
TCCTTGTGCTATCAGACAAA+CGG + Chr8:62104914-62104933 None:intergenic 40.0%
TCTTCATCCTAGCAATCTCA+AGG + Chr8:62105508-62105527 None:intergenic 40.0%
TGACATGTCTGGTGGTAAAA+AGG - Chr8:62103337-62103356 MsG0880045645.01.T01:CDS 40.0%
TGGCAAGTACACACAAAAAG+TGG + Chr8:62104512-62104531 None:intergenic 40.0%
TGTAGAAGCTTGTGAGAACT+GGG - Chr8:62103208-62103227 MsG0880045645.01.T01:CDS 40.0%
TTGTAGAAGCTTGTGAGAAC+TGG - Chr8:62103207-62103226 MsG0880045645.01.T01:exon 40.0%
! AAGTGTTATCTGAGGCTATG+GGG - Chr8:62104196-62104215 MsG0880045645.01.T01:intron 40.0%
! GAAGTGTTATCTGAGGCTAT+GGG - Chr8:62104195-62104214 MsG0880045645.01.T01:intron 40.0%
! GAGATGACTCGTTTTGCTAA+AGG - Chr8:62103278-62103297 MsG0880045645.01.T01:CDS 40.0%
! GGTCTTTTCTTGAGCAAGAT+AGG + Chr8:62103051-62103070 None:intergenic 40.0%
! TCAAGTTGTTGATCATGGTG+TGG - Chr8:62103238-62103257 MsG0880045645.01.T01:CDS 40.0%
!! AAAGAGTACTCACATGACCA+TGG + Chr8:62104461-62104480 None:intergenic 40.0%
!! ACAACAAAAGCACCTTCAAC+TGG + Chr8:62104426-62104445 None:intergenic 40.0%
!! AGAAGTGTTATCTGAGGCTA+TGG - Chr8:62104194-62104213 MsG0880045645.01.T01:intron 40.0%
AAATGCTGATCACCAAGCAG+TGG - Chr8:62105328-62105347 MsG0880045645.01.T01:intron 45.0%
AGATAGGTGAGAGTTTGAGC+TGG + Chr8:62103035-62103054 None:intergenic 45.0%
AGCAATAGAGTAATGGTGCC+AGG + Chr8:62104339-62104358 None:intergenic 45.0%
AGTTGGAATTCACCACTGCT+TGG + Chr8:62105343-62105362 None:intergenic 45.0%
ATGTCTGGTGGTAAAAAGGG+TGG - Chr8:62103341-62103360 MsG0880045645.01.T01:CDS 45.0%
CAAGAGTTAGGTCTGGTTGA+GGG + Chr8:62104296-62104315 None:intergenic 45.0%
CCTTGTGCTATCAGACAAAC+GGG + Chr8:62104913-62104932 None:intergenic 45.0%
CGCGAACAAAACTGGATTCA+AGG + Chr8:62103073-62103092 None:intergenic 45.0%
GATTGCTAGGATGAAGAAGC+TGG - Chr8:62105511-62105530 MsG0880045645.01.T01:CDS 45.0%
GCAACCTTCCTTGCAAACAA+TGG - Chr8:62103007-62103026 MsG0880045645.01.T01:three_prime_UTR 45.0%
GCGGTGTTTGTATGAGGTTT+GGG + Chr8:62102970-62102989 None:intergenic 45.0%
GGGATGGATGAGTAAGAGAA+TGG + Chr8:62102912-62102931 None:intergenic 45.0%
GTAGAAGCTTGTGAGAACTG+GGG - Chr8:62103209-62103228 MsG0880045645.01.T01:CDS 45.0%
GTCGTTTCAGTCCAAGAGTT+AGG + Chr8:62104308-62104327 None:intergenic 45.0%
GTTACCTCTTTCCATCCTTC+TGG + Chr8:62104129-62104148 None:intergenic 45.0%
TACCACCAGACATGTCAAAC+CGG + Chr8:62103334-62103353 None:intergenic 45.0%
TAGCTTGAAGACCACCTACT+TGG + Chr8:62104368-62104387 None:intergenic 45.0%
TAGGATGAAGAAGCTGGCTA+AGG - Chr8:62105517-62105536 MsG0880045645.01.T01:CDS 45.0%
TATTCAGGGAGAAGCTGTGA+AGG - Chr8:62104032-62104051 MsG0880045645.01.T01:intron 45.0%
TTCAGTCCAAGAGTTAGGTC+TGG + Chr8:62104303-62104322 None:intergenic 45.0%
TTGCTTCAAGACCAAGTAGG+TGG - Chr8:62104354-62104373 MsG0880045645.01.T01:CDS 45.0%
! AAAGGGTACACAGTTGCATC+TGG + Chr8:62105404-62105423 None:intergenic 45.0%
! AGAGTGATGACTTTGAGGGA+TGG + Chr8:62102928-62102947 None:intergenic 45.0%
! CTCTTTGAAAAGTGAGGGAG+TGG + Chr8:62105847-62105866 None:intergenic 45.0%
!! AGGTTTCTTTGATTTGCCGC+CGG - Chr8:62103298-62103317 MsG0880045645.01.T01:CDS 45.0%
!! TTGCATCTGGTGCTGGATTT+TGG + Chr8:62105391-62105410 None:intergenic 45.0%
!!! AGGAAGGTTGCGGTGTTTTT+TGG + Chr8:62102998-62103017 None:intergenic 45.0%
!!! GTTGCGGTGTTTTTTGGCTA+AGG + Chr8:62102992-62103011 None:intergenic 45.0%
AGGGAGAAGCTGTGAAGGAT+TGG - Chr8:62104037-62104056 MsG0880045645.01.T01:intron 50.0%
CAAGCCAGAAGGATGGAAAG+AGG - Chr8:62104122-62104141 MsG0880045645.01.T01:intron 50.0%
CCAAGAGTTAGGTCTGGTTG+AGG + Chr8:62104297-62104316 None:intergenic 50.0%
CCCGTTTGTCTGATAGCACA+AGG - Chr8:62104910-62104929 MsG0880045645.01.T01:intron 50.0%
CCTCAACCAGACCTAACTCT+TGG - Chr8:62104294-62104313 MsG0880045645.01.T01:intron 50.0%
CTGAAACGACACACTGATCC+TGG - Chr8:62104318-62104337 MsG0880045645.01.T01:intron 50.0%
CTTGATGGAATCGACGACGT+TGG - Chr8:62103155-62103174 MsG0880045645.01.T01:three_prime_UTR 50.0%
GCAAGGACCTTGAGATTGCT+AGG - Chr8:62105498-62105517 MsG0880045645.01.T01:CDS 50.0%
GCTAAGGCGGTGTTTGTATG+AGG + Chr8:62102976-62102995 None:intergenic 50.0%
GGCGGTGTTTGTATGAGGTT+TGG + Chr8:62102971-62102990 None:intergenic 50.0%
TACACAGTTGCATCTGGTGC+TGG + Chr8:62105398-62105417 None:intergenic 50.0%
TCAAACCGGAGCTTCTCTTC+CGG + Chr8:62103320-62103339 None:intergenic 50.0%
! AAGCTCCGGTTTGACATGTC+TGG - Chr8:62103326-62103345 MsG0880045645.01.T01:CDS 50.0%
!! AGCTGGTGCCATTGTTTGCA+AGG + Chr8:62103018-62103037 None:intergenic 50.0%
!! GGTGCCATTGTTTGCAAGGA+AGG + Chr8:62103014-62103033 None:intergenic 50.0%
!! TTCCATCCTTCTGGCTTGTC+TGG + Chr8:62104120-62104139 None:intergenic 50.0%
!!! AGGTCTGGTTGAGGGCATTT+TGG + Chr8:62104288-62104307 None:intergenic 50.0%
!!! GCGGTGTTTTTTGGCTAAGG+CGG + Chr8:62102989-62103008 None:intergenic 50.0%
!!! GGTCTGGTTGAGGGCATTTT+GGG + Chr8:62104287-62104306 None:intergenic 50.0%
GATGGAATCGACGACGTTGG+TGG - Chr8:62103158-62103177 MsG0880045645.01.T01:three_prime_UTR 55.0%
! CTCCGGTTTGACATGTCTGG+TGG - Chr8:62103329-62103348 MsG0880045645.01.T01:CDS 55.0%
AACCGGAGCTTCTCTTCCGG+CGG + Chr8:62103317-62103336 None:intergenic 60.0%
AGGTGGCCAGACAAGCCAGA+AGG - Chr8:62104111-62104130 MsG0880045645.01.T01:intron 60.0%
GGCCAGACAAGCCAGAAGGA+TGG - Chr8:62104115-62104134 MsG0880045645.01.T01:intron 60.0%
TGCCGCCGGAAGAGAAGCTC+CGG - Chr8:62103312-62103331 MsG0880045645.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 62102885 62105930 62102885 ID=MsG0880045645.01;Name=MsG0880045645.01
Chr8 mRNA 62102885 62105930 62102885 ID=MsG0880045645.01.T01;Parent=MsG0880045645.01;Name=MsG0880045645.01.T01;_AED=0.45;_eAED=0.45;_QI=141|1|1|1|1|1|3|323|364
Chr8 exon 62102885 62103510 62102885 ID=MsG0880045645.01.T01:exon:23727;Parent=MsG0880045645.01.T01
Chr8 exon 62104348 62104776 62104348 ID=MsG0880045645.01.T01:exon:23726;Parent=MsG0880045645.01.T01
Chr8 exon 62105427 62105930 62105427 ID=MsG0880045645.01.T01:exon:23725;Parent=MsG0880045645.01.T01
Chr8 five_prime_UTR 62105790 62105930 62105790 ID=MsG0880045645.01.T01:five_prime_utr;Parent=MsG0880045645.01.T01
Chr8 CDS 62105427 62105789 62105427 ID=MsG0880045645.01.T01:cds;Parent=MsG0880045645.01.T01
Chr8 CDS 62104348 62104776 62104348 ID=MsG0880045645.01.T01:cds;Parent=MsG0880045645.01.T01
Chr8 CDS 62103208 62103510 62103208 ID=MsG0880045645.01.T01:cds;Parent=MsG0880045645.01.T01
Chr8 three_prime_UTR 62102885 62103207 62102885 ID=MsG0880045645.01.T01:three_prime_utr;Parent=MsG0880045645.01.T01
Gene Sequence

>MsG0880045645.01.T01

ATGGCACCAGCTCAAACTCTCACCTATCTTGCTCAAGAAAAGACCCTTGAATCCAGTTTTGTTCGCGAAGAAGATGAGCGTCCAAAAGTTGCTTACAACAACTTCAGCAACGAGATTCCAATCATTTCTCTTGATGGAATCGACGACGTTGGTGGCCGTAGAGAAGAGATATGCAACAAGATTGTAGAAGCTTGTGAGAACTGGGGTATCTTTCAAGTTGTTGATCATGGTGTGGATTCAAAGCTTATTTCTGAGATGACTCGTTTTGCTAAAGGTTTCTTTGATTTGCCGCCGGAAGAGAAGCTCCGGTTTGACATGTCTGGTGGTAAAAAGGGTGGATTCATAGTCTCTAGTCATCTTCAGGGAGAAGCTGTGAAGGATTGGAGAGAGCTAGTGACATATTTTTCATACCCAATTAGACAAAGAGACTATTCAAGGTGGCCAGACAAGCCAGAAGGATGGAAAGAGGTAACAGAACAATACAGTGAGAAGCTAATGAATTTAGCTTGCAAGCTATTAGAAGTGTTATCTGAGGCTATGGGGTTAGAAAAAGAAGCTCTAACAAAAGCATGTGTTGATATGGATCAAAAAGTTGTGATCAATTACTACCCAAAATGCCCTCAACCAGACCTAACTCTTGGACTGAAACGACACACTGATCCTGGCACCATTACTCTATTGCTTCAAGACCAAGTAGGTGGTCTTCAAGCTACCAAAGATAATGGTAAGACATGGATCACTGTTCAACCAGTTGAAGGTGCTTTTGTTGTTAATCTTGGAGACCATGGTCATTATCTAAGTAATGGACGGTTCAAAAATGCTGATCACCAAGCAGTGGTGAATTCCAACTATAGCCGTTTATCCATAGCAACATTCCAAAATCCAGCACCAGATGCAACTGTGTACCCTTTGAAGATTAGAGATGGAGATAAATCTGTGATGGATGAACCAATCACTTTTGCTGAAATGTATAGGAGGAAAATGAGCAAGGACCTTGAGATTGCTAGGATGAAGAAGCTGGCTAAGGAAAAAGAACTTAGGGACTTAGAGAAGGCAAAACTTGAGGCCAAGCCTTTGAATGAGATTCTTGCTTAA

Protein sequence

>MsG0880045645.01.T01

MAPAQTLTYLAQEKTLESSFVREEDERPKVAYNNFSNEIPIISLDGIDDVGGRREEICNKIVEACENWGIFQVVDHGVDSKLISEMTRFAKGFFDLPPEEKLRFDMSGGKKGGFIVSSHLQGEAVKDWRELVTYFSYPIRQRDYSRWPDKPEGWKEVTEQYSEKLMNLACKLLEVLSEAMGLEKEALTKACVDMDQKVVINYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNYSRLSIATFQNPAPDATVYPLKIRDGDKSVMDEPITFAEMYRRKMSKDLEIARMKKLAKEKELRDLEKAKLEAKPLNEILA*