AlfalfaGEDB | MsG0880045791.01

M. sativa cultivar ZhongmuNo.1 / MsG0880045791.01

KEGG: -
GO: GO:0003677 GO:0006355
PFAM: PF02701

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045791.01.T01	XP_013446454.1	87.19	242	18	5	1	242	1	229	3.46E-119	349

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045791.01.T01	Q39088	48.289	263	105	9	1	242	1	253	1.36E-57	186

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045791.01.T01	A0A072TTI5	90.984	244	5	6	1	242	1	229	1.88e-151	430

TFs/TRs:

Gene ID	Type	Classification
MsG0880045791.01.T01	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0480019601.01	MsG0880045791.01	0.801371	9.293926e-49	4.430961e-46
MsG0480022307.01	MsG0880045791.01	0.805543	1.268651e-49	6.729801e-47
MsG0480022378.01	MsG0880045791.01	0.801846	7.427215e-49	3.583819e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045791.01.T01	MTR_8g079060	87.190	242	18	5	1	242	1	229	4.19e-123	349
MsG0880045791.01.T01	MTR_8g015840	74.286	70	17	1	17	85	7	76	5.74e-32	117
MsG0880045791.01.T01	MTR_2g096740	65.333	75	26	0	22	96	55	129	1.53e-31	117
MsG0880045791.01.T01	MTR_2g096740	65.333	75	26	0	22	96	70	144	1.89e-31	117
MsG0880045791.01.T01	MTR_4g088580	63.158	76	28	0	31	106	57	132	1.27e-30	117
MsG0880045791.01.T01	MTR_4g063780	51.887	106	38	2	17	109	54	159	1.39e-30	116
MsG0880045791.01.T01	MTR_8g027295	41.844	141	80	1	23	163	18	156	5.15e-30	113
MsG0880045791.01.T01	MTR_2g093220	42.515	167	89	3	12	174	24	187	6.44e-30	113
MsG0880045791.01.T01	MTR_8g479350	59.494	79	32	0	26	104	65	143	8.58e-30	114
MsG0880045791.01.T01	MTR_7g059400	44.805	154	52	4	17	142	55	203	1.30e-29	114
MsG0880045791.01.T01	MTR_4g022370	41.304	184	85	6	17	190	61	231	2.14e-29	113
MsG0880045791.01.T01	MTR_4g461080	61.728	81	23	1	1	81	9	81	4.22e-29	110
MsG0880045791.01.T01	MTR_7g024670	75.410	61	15	0	31	91	79	139	7.58e-29	112
MsG0880045791.01.T01	MTR_1g077600	62.857	70	26	0	14	83	28	97	5.88e-28	108
MsG0880045791.01.T01	MTR_1g077600	62.857	70	26	0	14	83	28	97	5.96e-28	107
MsG0880045791.01.T01	MTR_3g091820	70.588	68	18	2	18	85	33	98	1.05e-27	107
MsG0880045791.01.T01	MTR_4g089095	75.000	60	14	1	27	86	48	106	3.48e-27	106
MsG0880045791.01.T01	MTR_3g435480	32.710	214	118	5	29	235	136	330	4.12e-27	108
MsG0880045791.01.T01	MTR_4g089095	78.947	57	11	1	27	83	14	69	4.78e-27	105
MsG0880045791.01.T01	MTR_5g031440	71.429	56	16	0	24	79	38	93	1.26e-26	105
MsG0880045791.01.T01	MTR_8g068210	54.321	81	34	1	29	109	32	109	2.64e-26	104
MsG0880045791.01.T01	MTR_2g013370	75.439	57	13	1	27	83	44	99	3.23e-26	103
MsG0880045791.01.T01	MTR_2g014170	83.673	49	8	0	29	77	45	93	6.38e-26	103
MsG0880045791.01.T01	MTR_3g077750	70.312	64	15	1	16	79	52	111	6.67e-26	103
MsG0880045791.01.T01	MTR_4g109980	79.245	53	11	0	27	79	38	90	6.88e-26	103
MsG0880045791.01.T01	MTR_7g010950	38.065	155	71	4	29	178	135	269	7.41e-26	105
MsG0880045791.01.T01	MTR_2g014060	61.972	71	23	1	10	80	10	76	9.07e-26	103
MsG0880045791.01.T01	MTR_2g059540	81.633	49	9	0	29	77	31	79	6.01e-25	98.2
MsG0880045791.01.T01	MTR_4g082060	63.934	61	22	0	29	89	122	182	6.07e-25	102
MsG0880045791.01.T01	MTR_3g090430	56.098	82	26	1	2	83	34	105	7.61e-25	100
MsG0880045791.01.T01	MTR_6g012450	37.662	154	76	4	29	176	136	275	9.09e-25	102
MsG0880045791.01.T01	MTR_2g016030	67.273	55	18	0	26	80	44	98	1.72e-24	95.9
MsG0880045791.01.T01	MTR_5g041420	53.659	82	38	0	21	102	130	211	2.68e-24	99.0
MsG0880045791.01.T01	MTR_8g044220	60.606	66	25	1	29	93	118	183	3.79e-24	100
MsG0880045791.01.T01	MTR_1g056810	59.211	76	29	1	31	106	14	87	5.60e-24	97.4
MsG0880045791.01.T01	MTR_7g086780	40.517	116	62	3	31	139	101	216	1.42e-23	98.6
MsG0880045791.01.T01	MTR_6g027460	39.695	131	73	3	29	156	96	223	2.86e-23	97.1
MsG0880045791.01.T01	MTR_5g041380	73.585	53	14	0	29	81	127	179	4.74e-23	96.3
MsG0880045791.01.T01	MTR_5g041400	73.585	53	14	0	29	81	119	171	5.01e-23	96.3
MsG0880045791.01.T01	MTR_5g041530	62.295	61	23	0	21	81	132	192	2.07e-22	94.7
MsG0880045791.01.T01	MTR_6g027450	56.716	67	28	1	29	94	89	155	2.17e-22	94.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045791.01.T01	AT3G50410	48.289	263	105	9	1	242	1	253	1.38e-58	186
MsG0880045791.01.T01	AT5G66940	46.186	236	94	9	4	223	3	221	8.89e-50	163
MsG0880045791.01.T01	AT1G51700	49.359	156	62	4	24	171	28	174	1.66e-35	125
MsG0880045791.01.T01	AT3G21270	43.293	164	76	5	29	184	29	183	1.34e-32	118
MsG0880045791.01.T01	AT5G60850	66.265	83	25	2	27	109	49	128	1.63e-31	118
MsG0880045791.01.T01	AT5G60200	63.636	88	24	2	22	109	48	127	7.82e-31	115
MsG0880045791.01.T01	AT3G45610	52.294	109	43	2	2	110	13	112	1.02e-30	114
MsG0880045791.01.T01	AT1G47655	39.496	238	101	9	11	242	9	209	1.39e-30	113
MsG0880045791.01.T01	AT5G65590	68.182	66	21	0	23	88	35	100	1.40e-28	110
MsG0880045791.01.T01	AT1G07640	74.138	58	15	0	29	86	21	78	2.33e-28	108
MsG0880045791.01.T01	AT3G55370	63.514	74	25	2	21	93	114	186	4.24e-28	110
MsG0880045791.01.T01	AT1G07640	74.138	58	15	0	29	86	77	134	4.42e-28	109
MsG0880045791.01.T01	AT1G07640	74.138	58	15	0	29	86	85	142	5.53e-28	109
MsG0880045791.01.T01	AT3G55370	63.514	74	25	2	21	93	69	141	5.80e-28	108
MsG0880045791.01.T01	AT3G55370	63.514	74	25	2	21	93	69	141	6.62e-28	109
MsG0880045791.01.T01	AT1G28310	75.862	58	14	0	29	86	27	84	7.21e-28	108
MsG0880045791.01.T01	AT5G62430	63.158	76	27	1	29	103	54	129	8.38e-28	108
MsG0880045791.01.T01	AT1G28310	75.862	58	14	0	29	86	51	108	9.45e-28	108
MsG0880045791.01.T01	AT3G61850	70.769	65	18	1	23	87	56	119	3.05e-27	106
MsG0880045791.01.T01	AT3G61850	70.769	65	18	1	23	87	56	119	3.05e-27	106
MsG0880045791.01.T01	AT3G61850	70.769	65	18	1	23	87	68	131	3.98e-27	106
MsG0880045791.01.T01	AT5G02460	63.636	77	17	2	17	83	74	149	4.14e-27	107
MsG0880045791.01.T01	AT4G24060	52.083	96	43	2	18	111	43	137	4.51e-27	107
MsG0880045791.01.T01	AT5G39660	56.098	82	34	1	29	108	138	219	4.79e-27	108
MsG0880045791.01.T01	AT5G39660	56.098	82	34	1	29	108	138	219	4.79e-27	108
MsG0880045791.01.T01	AT5G39660	56.098	82	34	1	29	108	138	219	4.79e-27	108
MsG0880045791.01.T01	AT3G61850	70.769	65	18	1	23	87	56	119	5.39e-27	106
MsG0880045791.01.T01	AT3G61850	70.769	65	18	1	23	87	68	131	5.88e-27	106
MsG0880045791.01.T01	AT3G47500	40.741	135	64	3	1	121	84	216	6.12e-27	108
MsG0880045791.01.T01	AT4G38000	61.039	77	27	2	10	83	19	95	8.30e-27	104
MsG0880045791.01.T01	AT2G28810	73.684	57	15	0	24	80	72	128	8.39e-27	105
MsG0880045791.01.T01	AT2G28810	73.684	57	15	0	24	80	89	145	1.16e-26	105
MsG0880045791.01.T01	AT2G37590	59.722	72	29	0	12	83	72	143	4.23e-26	103
MsG0880045791.01.T01	AT2G28510	74.545	55	14	0	31	85	50	104	9.40e-26	102
MsG0880045791.01.T01	AT4G21050	64.179	67	23	1	31	97	26	91	1.07e-25	100
MsG0880045791.01.T01	AT1G21340	64.706	68	21	1	25	89	31	98	1.41e-25	101
MsG0880045791.01.T01	AT4G00940	70.690	58	17	0	26	83	65	122	4.11e-25	100
MsG0880045791.01.T01	AT4G00940	70.690	58	17	0	26	83	65	122	4.11e-25	100
MsG0880045791.01.T01	AT4G00940	70.690	58	17	0	26	83	65	122	4.11e-25	100
MsG0880045791.01.T01	AT4G21040	64.179	67	22	1	31	97	27	91	1.10e-24	98.2
MsG0880045791.01.T01	AT5G62940	67.188	64	17	1	16	79	64	123	1.15e-24	100
MsG0880045791.01.T01	AT1G69570	62.687	67	24	1	29	94	132	198	1.23e-24	101
MsG0880045791.01.T01	AT3G52440	63.636	66	24	0	18	83	14	79	1.26e-24	98.6
MsG0880045791.01.T01	AT3G52440	63.636	66	24	0	18	83	33	98	1.71e-24	98.6
MsG0880045791.01.T01	AT1G29160	45.000	100	55	0	29	128	62	161	1.74e-24	96.3
MsG0880045791.01.T01	AT2G46590	74.074	54	14	0	23	76	62	115	1.75e-24	100
MsG0880045791.01.T01	AT2G46590	74.074	54	14	0	23	76	74	127	1.96e-24	100
MsG0880045791.01.T01	AT1G26790	71.698	53	15	0	29	81	111	163	2.29e-24	100
MsG0880045791.01.T01	AT4G21080	65.672	67	21	1	31	97	27	91	3.83e-24	97.4
MsG0880045791.01.T01	AT1G64620	60.811	74	20	2	14	78	25	98	3.89e-23	96.3
MsG0880045791.01.T01	AT2G34140	67.925	53	17	0	29	81	58	110	7.13e-23	92.0
MsG0880045791.01.T01	AT4G21030	43.750	80	39	1	31	110	23	96	5.16e-14	68.9

Find 91 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATCAAAACTCTGGGTTTC+TGG	0.121250	8:-64505999	MsG0880045791.01.T01:CDS
GCAAAGCTTGTCGCCGTTAC+TGG	0.222236	8:-64506294	MsG0880045791.01.T01:CDS
TTCTGGCATTAGGTGGATTT+GGG	0.223026	8:-64505982	MsG0880045791.01.T01:CDS
CCGTCAATACCGCCGGAAAA+TGG	0.237022	8:+64506082	None:intergenic
GGTGTTCCTGTTGTGTCTTC+TGG	0.239637	8:-64505869	MsG0880045791.01.T01:CDS
TTTCTGGCATTAGGTGGATT+TGG	0.249923	8:-64505983	MsG0880045791.01.T01:CDS
CATTAGGTGGATTTGGGCTT+GGG	0.256673	8:-64505976	MsG0880045791.01.T01:CDS
GCTATTTCAACACCAGTAAA+TGG	0.284985	8:-64505764	MsG0880045791.01.T01:CDS
GCATTAGGTGGATTTGGGCT+TGG	0.292718	8:-64505977	MsG0880045791.01.T01:CDS
GGTGGATTTGGGCTTGGGCT+TGG	0.292816	8:-64505971	MsG0880045791.01.T01:CDS
TTTGGGCTTGGGCTTGGACA+TGG	0.300293	8:-64505965	MsG0880045791.01.T01:CDS
TTGGGCTTGGGCTTGGACAT+GGG	0.342240	8:-64505964	MsG0880045791.01.T01:CDS
TTTGATCCATCCACCATTCC+TGG	0.347481	8:+64505896	None:intergenic
GGGCTTGAAGAAATGGGCTT+TGG	0.347490	8:-64505944	MsG0880045791.01.T01:CDS
GTTGTGTCTTCTGGTGTTGT+TGG	0.348865	8:-64505860	MsG0880045791.01.T01:CDS
AAGAAATGGGCTTTGGGATT+GGG	0.351153	8:-64505937	MsG0880045791.01.T01:CDS
TGCTCCGGTGCCGGTGCACC+GGG	0.353622	8:+64506406	None:intergenic
TGGACATGGGCTTGAAGAAA+TGG	0.357925	8:-64505951	MsG0880045791.01.T01:CDS
TGGGATTGGGAGAACAGGTT+GGG	0.361604	8:-64505924	MsG0880045791.01.T01:CDS
TCCACCTTGGACGGCGGAGA+TGG	0.366306	8:+64506114	None:intergenic
GGTGATTGTTTCTCTTGGCC+TGG	0.369523	8:-64505791	MsG0880045791.01.T01:CDS
GGCTTTGGGATTGGGAGAAC+AGG	0.373009	8:-64505929	MsG0880045791.01.T01:CDS
TTGCTCCGGTGCCGGTGCAC+CGG	0.375742	8:+64506405	None:intergenic
GGCTTGAAGAAATGGGCTTT+GGG	0.379257	8:-64505943	MsG0880045791.01.T01:CDS
GTTCATTTGAGACCATTTAC+TGG	0.380286	8:+64505752	None:intergenic
GAAGAAATGGGCTTTGGGAT+TGG	0.382875	8:-64505938	MsG0880045791.01.T01:CDS
GTGGTGGTGATTGTTTCTCT+TGG	0.384765	8:-64505796	MsG0880045791.01.T01:CDS
ATCTCCGCCGTCCAAGGTGG+AGG	0.395663	8:-64506112	MsG0880045791.01.T01:CDS
CGCCGTGACTTCAGCGGCGC+CGG	0.403138	8:-64506164	MsG0880045791.01.T01:CDS
TGTTGATCGGCGGCTTTCAC+CGG	0.408674	8:+64506444	None:intergenic
GGTGCACCGGGGCGGATTTG+AGG	0.417132	8:+64506418	None:intergenic
AACTCTGGGTTTCTGGCATT+AGG	0.420912	8:-64505992	MsG0880045791.01.T01:CDS
CCGCCCCGGTGCACCGGCAC+CGG	0.422541	8:-64506410	MsG0880045791.01.T01:CDS
AACAACAACAATCAAAACTC+TGG	0.431082	8:-64506007	MsG0880045791.01.T01:CDS
CCACCTTGGACGGCGGAGAT+GGG	0.436586	8:+64506115	None:intergenic
AGATTCTCTTGCTCCGGTGC+CGG	0.436640	8:+64506397	None:intergenic
GGACATGGGCTTGAAGAAAT+GGG	0.438047	8:-64505950	MsG0880045791.01.T01:CDS
ATGGTTAGTACGAGAGCGTT+TGG	0.439453	8:+64506216	None:intergenic
TTGGGATTGGGAGAACAGGT+TGG	0.446014	8:-64505925	MsG0880045791.01.T01:CDS
CTCCGGCGCCGCTGAAGTCA+CGG	0.453189	8:+64506162	None:intergenic
ACAACACCAGAAGACACAAC+AGG	0.458334	8:+64505863	None:intergenic
CCGGCGGTATTGACGGTGAT+GGG	0.466545	8:-64506075	MsG0880045791.01.T01:CDS
GGAAACACGTGGCAGTTAGA+AGG	0.471025	8:-64505839	MsG0880045791.01.T01:CDS
TTTCTGGTACCACCGCCGAC+GGG	0.484650	8:+64506244	None:intergenic
ACCTAAACAAATGACATCTT+CGG	0.485533	8:-64506470	None:intergenic
CGTGACATCCCCGTCGGCGG+TGG	0.490474	8:-64506253	MsG0880045791.01.T01:CDS
CATGGGAGATTCTCTTGCTC+CGG	0.492080	8:+64506391	None:intergenic
CAGTTAGAAGGTGGTGAAGG+TGG	0.495978	8:-64505827	MsG0880045791.01.T01:CDS
TCAAATCCGCCCCGGTGCAC+CGG	0.515212	8:-64506416	MsG0880045791.01.T01:CDS
TCCGGCGGTATTGACGGTGA+TGG	0.517628	8:-64506076	MsG0880045791.01.T01:CDS
CGCCGCTGAAGTCACGGCGG+AGG	0.518030	8:+64506168	None:intergenic
AAGCAGAATATGAGTGTTTG+TGG	0.522514	8:-64506052	MsG0880045791.01.T01:CDS
GCTTGATAGTGGTGGTGCTC+CGG	0.532605	8:+64506145	None:intergenic
GTTGAATCACAACGTGGACA+TGG	0.538502	8:+64506373	None:intergenic
TCTGGGTTTCTGGCATTAGG+TGG	0.547157	8:-64505989	MsG0880045791.01.T01:CDS
CACGGCGGAGGAAGAAGACG+AGG	0.549109	8:+64506180	None:intergenic
CACCGCCGACGGGGATGTCA+CGG	0.552285	8:+64506254	None:intergenic
GTAGTAACAAAACTTAGTGT+TGG	0.560310	8:+64506351	None:intergenic
ACACCCATCTCCGCCGTCCA+AGG	0.562889	8:-64506118	MsG0880045791.01.T01:CDS
TCTCCGCCGTCCAAGGTGGA+GGG	0.563713	8:-64506111	MsG0880045791.01.T01:CDS
CAAATGACATCTTCGGACTC+CGG	0.572622	8:-64506463	MsG0880045791.01.T01:CDS
TTCTGGTACCACCGCCGACG+GGG	0.573655	8:+64506245	None:intergenic
ACAACAACAATCAAAACTCT+GGG	0.575835	8:-64506006	MsG0880045791.01.T01:CDS
ATGGAAAAGACCCTCCACCT+TGG	0.576601	8:+64506101	None:intergenic
CCCATCACCGTCAATACCGC+CGG	0.580375	8:+64506075	None:intergenic
CTCCGTGACATCCCCGTCGG+CGG	0.592048	8:-64506256	MsG0880045791.01.T01:CDS
AAAAGACCCTCCACCTTGGA+CGG	0.592275	8:+64506105	None:intergenic
GGTGTTGAAATAGCAAGTCC+AGG	0.592777	8:+64505773	None:intergenic
TGGGTGTCATTGCTTGATAG+TGG	0.598785	8:+64506134	None:intergenic
TTCCACCGTGAGTCCAGTAA+CGG	0.599141	8:+64506281	None:intergenic
TTCCTCCGCCGTGACTTCAG+CGG	0.607903	8:-64506170	MsG0880045791.01.T01:CDS
CCGGTGCCGGTGCACCGGGG+CGG	0.610074	8:+64506410	None:intergenic
CCCATCTCCGCCGTCCAAGG+TGG	0.613450	8:-64506115	MsG0880045791.01.T01:CDS
ACAAAACCTCAAATCCGCCC+CGG	0.621584	8:-64506424	MsG0880045791.01.T01:CDS
TGTCGCCGTTACTGGACTCA+CGG	0.630187	8:-64506286	MsG0880045791.01.T01:CDS
AGACCCTCCACCTTGGACGG+CGG	0.634960	8:+64506108	None:intergenic
TGGCAGTTAGAAGGTGGTGA+AGG	0.635231	8:-64505830	MsG0880045791.01.T01:CDS
ACCCTCCGTGACATCCCCGT+CGG	0.636867	8:-64506259	MsG0880045791.01.T01:CDS
CAAGCTTTGCAGAAATGACG+TGG	0.636873	8:+64506307	None:intergenic
CGCCGACGGGGATGTCACGG+AGG	0.643952	8:+64506257	None:intergenic
TTGAATCACAACGTGGACAT+GGG	0.644805	8:+64506374	None:intergenic
GCCGACGGGGATGTCACGGA+GGG	0.646087	8:+64506258	None:intergenic
GTGTCATTGCTTGATAGTGG+TGG	0.649877	8:+64506137	None:intergenic
ACGAGGAAGTTACAGCAACA+TGG	0.650301	8:+64506197	None:intergenic
GCTCCGGTGCCGGTGCACCG+GGG	0.657998	8:+64506407	None:intergenic
AACACGTGGCAGTTAGAAGG+TGG	0.673819	8:-64505836	MsG0880045791.01.T01:CDS
CGCCGTTACTGGACTCACGG+TGG	0.693801	8:-64506283	MsG0880045791.01.T01:CDS
ATGGTGGATGGATCAAACAT+TGG	0.699118	8:-64505890	MsG0880045791.01.T01:CDS
CTGGTGTTGTTGGAAACACG+TGG	0.703407	8:-64505850	MsG0880045791.01.T01:CDS
CGGCGCCGCTGAAGTCACGG+CGG	0.765762	8:+64506165	None:intergenic
GTGTTGGTTGAATCACAACG+TGG	0.795975	8:+64506367	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AACAACAACAATCAAAACTC+TGG	-	Chr8:64506207-64506226	MsG0880045791.01.T01:CDS	30.0%
	ACAACAACAATCAAAACTCT+GGG	-	Chr8:64506208-64506227	MsG0880045791.01.T01:CDS	30.0%
	GTAGTAACAAAACTTAGTGT+TGG	+	Chr8:64505866-64505885	None:intergenic	30.0%
	AAGCAGAATATGAGTGTTTG+TGG	-	Chr8:64506162-64506181	MsG0880045791.01.T01:CDS	35.0%
!	GCTATTTCAACACCAGTAAA+TGG	-	Chr8:64506450-64506469	MsG0880045791.01.T01:CDS	35.0%
!!!	GGATTTGAGGTTTTGTTGAT+CGG	+	Chr8:64505786-64505805	None:intergenic	35.0%
	CAATCAAAACTCTGGGTTTC+TGG	-	Chr8:64506215-64506234	MsG0880045791.01.T01:CDS	40.0%
	TTGAATCACAACGTGGACAT+GGG	+	Chr8:64505843-64505862	None:intergenic	40.0%
!	TTCTGGCATTAGGTGGATTT+GGG	-	Chr8:64506232-64506251	MsG0880045791.01.T01:CDS	40.0%
!	TTTCTGGCATTAGGTGGATT+TGG	-	Chr8:64506231-64506250	MsG0880045791.01.T01:CDS	40.0%
!!	AAGAAATGGGCTTTGGGATT+GGG	-	Chr8:64506277-64506296	MsG0880045791.01.T01:CDS	40.0%
!!	ATGGTGGATGGATCAAACAT+TGG	-	Chr8:64506324-64506343	MsG0880045791.01.T01:CDS	40.0%
!!!	TTTGAGGTTTTGTTGATCGG+CGG	+	Chr8:64505783-64505802	None:intergenic	40.0%
	ACAACACCAGAAGACACAAC+AGG	+	Chr8:64506354-64506373	None:intergenic	45.0%
	ACGAGGAAGTTACAGCAACA+TGG	+	Chr8:64506020-64506039	None:intergenic	45.0%
	CAAGCTTTGCAGAAATGACG+TGG	+	Chr8:64505910-64505929	None:intergenic	45.0%
	GGACATGGGCTTGAAGAAAT+GGG	-	Chr8:64506264-64506283	MsG0880045791.01.T01:CDS	45.0%
	GTTGAATCACAACGTGGACA+TGG	+	Chr8:64505844-64505863	None:intergenic	45.0%
	TGGACATGGGCTTGAAGAAA+TGG	-	Chr8:64506263-64506282	MsG0880045791.01.T01:CDS	45.0%
	TTTGATCCATCCACCATTCC+TGG	+	Chr8:64506321-64506340	None:intergenic	45.0%
!	CATTAGGTGGATTTGGGCTT+GGG	-	Chr8:64506238-64506257	MsG0880045791.01.T01:CDS	45.0%
!	GGAGGGTCTTTTCCATTTTC+CGG	-	Chr8:64506120-64506139	MsG0880045791.01.T01:CDS	45.0%
!	GGCTTGAAGAAATGGGCTTT+GGG	-	Chr8:64506271-64506290	MsG0880045791.01.T01:CDS	45.0%
!	GGTGTTGAAATAGCAAGTCC+AGG	+	Chr8:64506444-64506463	None:intergenic	45.0%
!	GTGGTGGTGATTGTTTCTCT+TGG	-	Chr8:64506418-64506437	MsG0880045791.01.T01:CDS	45.0%
!!	AACTCTGGGTTTCTGGCATT+AGG	-	Chr8:64506222-64506241	MsG0880045791.01.T01:CDS	45.0%
!!	ATGGTTAGTACGAGAGCGTT+TGG	+	Chr8:64506001-64506020	None:intergenic	45.0%
!!	GAAGAAATGGGCTTTGGGAT+TGG	-	Chr8:64506276-64506295	MsG0880045791.01.T01:CDS	45.0%
!!	GTGTCATTGCTTGATAGTGG+TGG	+	Chr8:64506080-64506099	None:intergenic	45.0%
!!	GTGTTGGTTGAATCACAACG+TGG	+	Chr8:64505850-64505869	None:intergenic	45.0%
!!	GTTGTGTCTTCTGGTGTTGT+TGG	-	Chr8:64506354-64506373	MsG0880045791.01.T01:CDS	45.0%
!!	TGGGTGTCATTGCTTGATAG+TGG	+	Chr8:64506083-64506102	None:intergenic	45.0%
!!!	AGAGCGTTTGGCGTTTTTTC+TGG	+	Chr8:64505989-64506008	None:intergenic	45.0%
	AAAAGACCCTCCACCTTGGA+CGG	+	Chr8:64506112-64506131	None:intergenic	50.0%
	AACACGTGGCAGTTAGAAGG+TGG	-	Chr8:64506378-64506397	MsG0880045791.01.T01:CDS	50.0%
	ACAAAACCTCAAATCCGCCC+CGG	-	Chr8:64505790-64505809	MsG0880045791.01.T01:CDS	50.0%
	ATGGAAAAGACCCTCCACCT+TGG	+	Chr8:64506116-64506135	None:intergenic	50.0%
	CAGTTAGAAGGTGGTGAAGG+TGG	-	Chr8:64506387-64506406	MsG0880045791.01.T01:CDS	50.0%
	CATGGGAGATTCTCTTGCTC+CGG	+	Chr8:64505826-64505845	None:intergenic	50.0%
	GGAAACACGTGGCAGTTAGA+AGG	-	Chr8:64506375-64506394	MsG0880045791.01.T01:CDS	50.0%
	GGTGTTCCTGTTGTGTCTTC+TGG	-	Chr8:64506345-64506364	MsG0880045791.01.T01:CDS	50.0%
	TGGCAGTTAGAAGGTGGTGA+AGG	-	Chr8:64506384-64506403	MsG0880045791.01.T01:CDS	50.0%
	TGGGATTGGGAGAACAGGTT+GGG	-	Chr8:64506290-64506309	MsG0880045791.01.T01:CDS	50.0%
	TTCCACCGTGAGTCCAGTAA+CGG	+	Chr8:64505936-64505955	None:intergenic	50.0%
	TTGGGATTGGGAGAACAGGT+TGG	-	Chr8:64506289-64506308	MsG0880045791.01.T01:CDS	50.0%
!	AGGTTGGGCTTTTCCAGGAA+TGG	-	Chr8:64506305-64506324	MsG0880045791.01.T01:CDS	50.0%
!	GCATTAGGTGGATTTGGGCT+TGG	-	Chr8:64506237-64506256	MsG0880045791.01.T01:CDS	50.0%
!	GGGCTTGAAGAAATGGGCTT+TGG	-	Chr8:64506270-64506289	MsG0880045791.01.T01:CDS	50.0%
!	GGGTCTTTTCCATTTTCCGG+CGG	-	Chr8:64506123-64506142	MsG0880045791.01.T01:CDS	50.0%
!	GGTGATTGTTTCTCTTGGCC+TGG	-	Chr8:64506423-64506442	MsG0880045791.01.T01:CDS	50.0%
!	TTGGGCTTTTCCAGGAATGG+TGG	-	Chr8:64506308-64506327	MsG0880045791.01.T01:CDS	50.0%
!!	AGAACAGGTTGGGCTTTTCC+AGG	-	Chr8:64506300-64506319	MsG0880045791.01.T01:CDS	50.0%
!!	CCATTTTCCGGCGGTATTGA+CGG	-	Chr8:64506132-64506151	MsG0880045791.01.T01:CDS	50.0%
!!	CTGGTGTTGTTGGAAACACG+TGG	-	Chr8:64506364-64506383	MsG0880045791.01.T01:CDS	50.0%
!!	GCTTTTCCAGGAATGGTGGA+TGG	-	Chr8:64506312-64506331	MsG0880045791.01.T01:CDS	50.0%
!!	TCTGGGTTTCTGGCATTAGG+TGG	-	Chr8:64506225-64506244	MsG0880045791.01.T01:CDS	50.0%
!!!	GAAGGTGGTTTTGTTGGTGG+TGG	-	Chr8:64506402-64506421	MsG0880045791.01.T01:CDS	50.0%
!!!	GGTGAAGGTGGTTTTGTTGG+TGG	-	Chr8:64506399-64506418	MsG0880045791.01.T01:CDS	50.0%
!!!	GGTGGTGAAGGTGGTTTTGT+TGG	-	Chr8:64506396-64506415	MsG0880045791.01.T01:CDS	50.0%
	AGATTCTCTTGCTCCGGTGC+CGG	+	Chr8:64505820-64505839	None:intergenic	55.0%
	CCGTCAATACCGCCGGAAAA+TGG	+	Chr8:64506135-64506154	None:intergenic	55.0%
	GCAAAGCTTGTCGCCGTTAC+TGG	-	Chr8:64505920-64505939	MsG0880045791.01.T01:CDS	55.0%
	TGTCGCCGTTACTGGACTCA+CGG	-	Chr8:64505928-64505947	MsG0880045791.01.T01:CDS	55.0%
	TGTTGATCGGCGGCTTTCAC+CGG	+	Chr8:64505773-64505792	None:intergenic	55.0%
	TTGGGCTTGGGCTTGGACAT+GGG	-	Chr8:64506250-64506269	MsG0880045791.01.T01:CDS	55.0%
	TTTGGGCTTGGGCTTGGACA+TGG	-	Chr8:64506249-64506268	MsG0880045791.01.T01:CDS	55.0%
!!	GCTTGATAGTGGTGGTGCTC+CGG	+	Chr8:64506072-64506091	None:intergenic	55.0%
!!	GGCTTTGGGATTGGGAGAAC+AGG	-	Chr8:64506285-64506304	MsG0880045791.01.T01:CDS	55.0%
!!	TTTTCTGGTACCACCGCCGA+CGG	+	Chr8:64505974-64505993	None:intergenic	55.0%
	CCCATCACCGTCAATACCGC+CGG	+	Chr8:64506142-64506161	None:intergenic	60.0%
	TTCCTCCGCCGTGACTTCAG+CGG	-	Chr8:64506044-64506063	MsG0880045791.01.T01:CDS	60.0%
!	GGTGGATTTGGGCTTGGGCT+TGG	-	Chr8:64506243-64506262	MsG0880045791.01.T01:CDS	60.0%
!	TTTCTGGTACCACCGCCGAC+GGG	+	Chr8:64505973-64505992	None:intergenic	60.0%
!!	CCGGCGGTATTGACGGTGAT+GGG	-	Chr8:64506139-64506158	MsG0880045791.01.T01:CDS	60.0%
!!	TCCGGCGGTATTGACGGTGA+TGG	-	Chr8:64506138-64506157	MsG0880045791.01.T01:CDS	60.0%
	ACACCCATCTCCGCCGTCCA+AGG	-	Chr8:64506096-64506115	MsG0880045791.01.T01:CDS	65.0%
	ACCCTCCGTGACATCCCCGT+CGG	-	Chr8:64505955-64505974	MsG0880045791.01.T01:CDS	65.0%
	AGACCCTCCACCTTGGACGG+CGG	+	Chr8:64506109-64506128	None:intergenic	65.0%
	ATCTCCGCCGTCCAAGGTGG+AGG	-	Chr8:64506102-64506121	MsG0880045791.01.T01:CDS	65.0%
	CACGGCGGAGGAAGAAGACG+AGG	+	Chr8:64506037-64506056	None:intergenic	65.0%
	CCACCTTGGACGGCGGAGAT+GGG	+	Chr8:64506102-64506121	None:intergenic	65.0%
	CGCCGTTACTGGACTCACGG+TGG	-	Chr8:64505931-64505950	MsG0880045791.01.T01:CDS	65.0%
	TCAAATCCGCCCCGGTGCAC+CGG	-	Chr8:64505798-64505817	MsG0880045791.01.T01:CDS	65.0%
	TCCACCTTGGACGGCGGAGA+TGG	+	Chr8:64506103-64506122	None:intergenic	65.0%
	TCTCCGCCGTCCAAGGTGGA+GGG	-	Chr8:64506103-64506122	MsG0880045791.01.T01:CDS	65.0%
	TTCTGGTACCACCGCCGACG+GGG	+	Chr8:64505972-64505991	None:intergenic	65.0%
	CACCGCCGACGGGGATGTCA+CGG	+	Chr8:64505963-64505982	None:intergenic	70.0%
	CCCATCTCCGCCGTCCAAGG+TGG	-	Chr8:64506099-64506118	MsG0880045791.01.T01:CDS	70.0%
	CTCCGGCGCCGCTGAAGTCA+CGG	+	Chr8:64506055-64506074	None:intergenic	70.0%
	CTCCGTGACATCCCCGTCGG+CGG	-	Chr8:64505958-64505977	MsG0880045791.01.T01:CDS	70.0%
	GCCGACGGGGATGTCACGGA+GGG	+	Chr8:64505959-64505978	None:intergenic	70.0%
!	GGTGCACCGGGGCGGATTTG+AGG	+	Chr8:64505799-64505818	None:intergenic	70.0%
!!	TTGCTCCGGTGCCGGTGCAC+CGG	+	Chr8:64505812-64505831	None:intergenic	70.0%
	CGCCGACGGGGATGTCACGG+AGG	+	Chr8:64505960-64505979	None:intergenic	75.0%
	CGCCGCTGAAGTCACGGCGG+AGG	+	Chr8:64506049-64506068	None:intergenic	75.0%
	CGCCGTGACTTCAGCGGCGC+CGG	-	Chr8:64506050-64506069	MsG0880045791.01.T01:CDS	75.0%
	CGGCGCCGCTGAAGTCACGG+CGG	+	Chr8:64506052-64506071	None:intergenic	75.0%
	CGTGACATCCCCGTCGGCGG+TGG	-	Chr8:64505961-64505980	MsG0880045791.01.T01:CDS	75.0%
!!	TGCTCCGGTGCCGGTGCACC+GGG	+	Chr8:64505811-64505830	None:intergenic	75.0%
!!!	GCTCCGGTGCCGGTGCACCG+GGG	+	Chr8:64505810-64505829	None:intergenic	80.0%
!!	CCGCCCCGGTGCACCGGCAC+CGG	-	Chr8:64505804-64505823	MsG0880045791.01.T01:CDS	85.0%
!!!	CCGGTGCCGGTGCACCGGGG+CGG	+	Chr8:64505807-64505826	None:intergenic	85.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	64505754	64506482	64505754	ID=MsG0880045791.01;Name=MsG0880045791.01
Chr8	mRNA	64505754	64506482	64505754	ID=MsG0880045791.01.T01;Parent=MsG0880045791.01;Name=MsG0880045791.01.T01;_AED=0.26;_eAED=0.26;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|242
Chr8	exon	64505754	64506482	64505754	ID=MsG0880045791.01.T01:exon:24448;Parent=MsG0880045791.01.T01
Chr8	CDS	64505754	64506482	64505754	ID=MsG0880045791.01.T01:cds;Parent=MsG0880045791.01.T01

Gene Sequence

>MsG0880045791.01.T01

ATGACATCTTCGGACTCCGGTGAAAGCCGCCGATCAACAAAACCTCAAATCCGCCCCGGTGCACCGGCACCGGAGCAAGAGAATCTCCCATGTCCACGTTGTGATTCAACCAACACTAAGTTTTGTTACTACAACAACTACAACTACTCTCAGCCACGTCATTTCTGCAAAGCTTGTCGCCGTTACTGGACTCACGGTGGAACCCTCCGTGACATCCCCGTCGGCGGTGGTACCAGAAAAAACGCCAAACGCTCTCGTACTAACCATGTTGCTGTAACTTCCTCGTCTTCTTCCTCCGCCGTGACTTCAGCGGCGCCGGAGCACCACCACTATCAAGCAATGACACCCATCTCCGCCGTCCAAGGTGGAGGGTCTTTTCCATTTTCCGGCGGTATTGACGGTGATGGGAAGCAGAATATGAGTGTTTGTGGAAGCTTCACTTCATTGCTGAACAACAACAACAATCAAAACTCTGGGTTTCTGGCATTAGGTGGATTTGGGCTTGGGCTTGGACATGGGCTTGAAGAAATGGGCTTTGGGATTGGGAGAACAGGTTGGGCTTTTCCAGGAATGGTGGATGGATCAAACATTGGTGTTCCTGTTGTGTCTTCTGGTGTTGTTGGAAACACGTGGCAGTTAGAAGGTGGTGAAGGTGGTTTTGTTGGTGGTGGTGATTGTTTCTCTTGGCCTGGACTTGCTATTTCAACACCAGTAAATGGTCTCAAATGA

Protein sequence

>MsG0880045791.01.T01

MTSSDSGESRRSTKPQIRPGAPAPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTNHVAVTSSSSSSAVTSAAPEHHHYQAMTPISAVQGGGSFPFSGGIDGDGKQNMSVCGSFTSLLNNNNNQNSGFLALGGFGLGLGHGLEEMGFGIGRTGWAFPGMVDGSNIGVPVVSSGVVGNTWQLEGGEGGFVGGGDCFSWPGLAISTPVNGLK*