Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019601.01.T01 | XP_024638141.1 | 95.915 | 710 | 26 | 1 | 1 | 710 | 1 | 707 | 0 | 1421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019601.01.T01 | Q9C810 | 52.661 | 714 | 290 | 21 | 2 | 696 | 3 | 687 | 0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019601.01.T01 | A0A396I2D4 | 95.915 | 710 | 26 | 1 | 1 | 710 | 1 | 707 | 0.0 | 1421 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480019601.01.T01 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048647.01 | MsG0480019601.01 | 0.842145 | 3.091896e-58 | 4.644836e-55 |
| MsG0180001719.01 | MsG0480019601.01 | 0.835754 | 1.395429e-56 | 1.722684e-53 |
| MsG0180001967.01 | MsG0480019601.01 | 0.810772 | 9.763281e-51 | 5.937956e-48 |
| MsG0180002134.01 | MsG0480019601.01 | 0.803605 | 3.219385e-49 | 1.624819e-46 |
| MsG0180003620.01 | MsG0480019601.01 | 0.826445 | 2.702727e-54 | 2.535202e-51 |
| MsG0180004120.01 | MsG0480019601.01 | 0.820699 | 5.975973e-53 | 4.762627e-50 |
| MsG0180004471.01 | MsG0480019601.01 | 0.848845 | 4.728512e-60 | 8.793147e-57 |
| MsG0180005819.01 | MsG0480019601.01 | 0.804035 | 2.620789e-49 | 1.337399e-46 |
| MsG0280010825.01 | MsG0480019601.01 | 0.828077 | 1.098756e-54 | 1.080710e-51 |
| MsG0380014544.01 | MsG0480019601.01 | 0.804410 | 2.189265e-49 | 1.127946e-46 |
| MsG0380014666.01 | MsG0480019601.01 | 0.849714 | 2.708137e-60 | 5.179958e-57 |
| MsG0480019601.01 | MsG0480020398.01 | 0.814300 | 1.653139e-51 | 1.105151e-48 |
| MsG0480019601.01 | MsG0480020937.01 | 0.854817 | 9.559965e-62 | 2.162203e-58 |
| MsG0480019601.01 | MsG0480021175.01 | 0.831243 | 1.864354e-55 | 2.011272e-52 |
| MsG0480019601.01 | MsG0480021456.01 | 0.813469 | 2.519118e-51 | 1.646589e-48 |
| MsG0480019601.01 | MsG0480021704.01 | 0.800667 | 1.294073e-48 | 6.060818e-46 |
| MsG0480019601.01 | MsG0480021773.01 | 0.825396 | 4.796863e-54 | 4.366900e-51 |
| MsG0480019601.01 | MsG0480021902.01 | 0.826873 | 2.136417e-54 | 2.028654e-51 |
| MsG0480019601.01 | MsG0480022307.01 | 0.842012 | 3.351774e-58 | 5.014168e-55 |
| MsG0480019601.01 | MsG0480022320.01 | 0.800095 | 1.692724e-48 | 7.813359e-46 |
| MsG0480019601.01 | MsG0480022378.01 | 0.829357 | 5.384804e-55 | 5.498808e-52 |
| MsG0480019601.01 | MsG0480023424.01 | 0.823946 | 1.053402e-53 | 9.201820e-51 |
| MsG0480019601.01 | MsG0480023426.01 | 0.835954 | 1.241692e-56 | 1.542044e-53 |
| MsG0480019601.01 | MsG0480023428.01 | 0.841927 | 3.531109e-58 | 5.268085e-55 |
| MsG0480019601.01 | MsG0480023626.01 | 0.831103 | 2.017807e-55 | 2.167982e-52 |
| MsG0480019601.01 | MsG0480023780.01 | 0.831963 | 1.238825e-55 | 1.365492e-52 |
| MsG0480019601.01 | MsG0480023842.01 | 0.817405 | 3.354165e-52 | 2.440507e-49 |
| MsG0480019601.01 | MsG0480024019.01 | 0.817964 | 2.509022e-52 | 1.853661e-49 |
| MsG0480019601.01 | MsG0580024060.01 | 0.804364 | 2.238766e-49 | 1.152112e-46 |
| MsG0480019601.01 | MsG0580024276.01 | 0.871319 | 7.484018e-67 | 3.006323e-63 |
| MsG0480019601.01 | MsG0580025504.01 | 0.839538 | 1.492631e-57 | 2.067463e-54 |
| MsG0480019601.01 | MsG0580025506.01 | 0.806933 | 6.466762e-50 | 3.554901e-47 |
| MsG0480019601.01 | MsG0580028927.01 | 0.852796 | 3.649056e-61 | 7.715364e-58 |
| MsG0480019601.01 | MsG0580028955.01 | 0.831785 | 1.370747e-55 | 1.503140e-52 |
| MsG0480019601.01 | MsG0680031356.01 | 0.842218 | 2.956509e-58 | 4.451711e-55 |
| MsG0480019601.01 | MsG0680035792.01 | 0.828015 | 1.136686e-54 | 1.116061e-51 |
| MsG0480019601.01 | MsG0780038736.01 | 0.841906 | 3.576082e-58 | 5.331763e-55 |
| MsG0480019601.01 | MsG0780039536.01 | 0.867751 | 1.086506e-65 | 3.835677e-62 |
| MsG0480019601.01 | MsG0780040554.01 | 0.814134 | 1.798634e-51 | 1.196951e-48 |
| MsG0480019601.01 | MsG0780041008.01 | 0.809602 | 1.744821e-50 | 1.028972e-47 |
| MsG0480019601.01 | MsG0780041273.01 | 0.823111 | 1.651803e-53 | 1.409237e-50 |
| MsG0480019601.01 | MsG0780041546.01 | 0.812380 | 4.365111e-51 | 2.771133e-48 |
| MsG0480019601.01 | MsG0880045015.01 | 0.800464 | 1.423578e-48 | 6.632743e-46 |
| MsG0480019601.01 | MsG0880045791.01 | 0.801371 | 9.293926e-49 | 4.430961e-46 |
| MsG0480019601.01 | MsG0880046529.01 | 0.800408 | 1.461930e-48 | 6.801933e-46 |
| MsG0480019601.01 | MsG0880046905.01 | 0.816002 | 6.920648e-52 | 4.845772e-49 |
| MsG0380015340.01 | MsG0480019601.01 | 0.836861 | 7.300417e-57 | 9.318116e-54 |
| MsG0380015402.01 | MsG0480019601.01 | 0.800872 | 1.175276e-48 | 5.533204e-46 |
| MsG0380017150.01 | MsG0480019601.01 | 0.836251 | 1.043996e-56 | 1.308522e-53 |
| MsG0380017416.01 | MsG0480019601.01 | 0.809954 | 1.465519e-50 | 8.722891e-48 |
| MsG0480018228.01 | MsG0480019601.01 | 0.810548 | 1.091188e-50 | 6.596654e-48 |
| MsG0280006717.01 | MsG0480019601.01 | 0.812380 | 4.365111e-51 | 2.771133e-48 |
| MsG0280007092.01 | MsG0480019601.01 | 0.804369 | 2.232452e-49 | 1.149049e-46 |
| MsG0280007919.01 | MsG0480019601.01 | 0.817090 | 3.948338e-52 | 2.848097e-49 |
| MsG0280009980.01 | MsG0480019601.01 | 0.807575 | 4.728431e-50 | 2.642885e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019601.01.T01 | MTR_4g035550 | 95.769 | 709 | 27 | 1 | 1 | 709 | 1 | 706 | 0.0 | 1417 |
| MsG0480019601.01.T01 | MTR_1g076990 | 49.499 | 699 | 334 | 9 | 1 | 693 | 2 | 687 | 0.0 | 684 |
| MsG0480019601.01.T01 | MTR_1g076990 | 49.460 | 556 | 262 | 9 | 144 | 693 | 3 | 545 | 0.0 | 530 |
| MsG0480019601.01.T01 | MTR_1g076990 | 46.154 | 481 | 240 | 9 | 220 | 693 | 49 | 517 | 1.89e-137 | 415 |
| MsG0480019601.01.T01 | MTR_5g040700 | 32.320 | 625 | 346 | 20 | 88 | 674 | 76 | 661 | 2.73e-91 | 298 |
| MsG0480019601.01.T01 | MTR_5g077750 | 28.027 | 735 | 391 | 20 | 12 | 672 | 11 | 681 | 4.40e-87 | 289 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019601.01.T01 | AT1G33420 | 52.661 | 714 | 290 | 21 | 2 | 696 | 3 | 687 | 0.0 | 707 |
| MsG0480019601.01.T01 | AT1G33420 | 51.753 | 599 | 247 | 16 | 112 | 696 | 12 | 582 | 0.0 | 588 |
| MsG0480019601.01.T01 | AT5G22260 | 29.967 | 614 | 364 | 13 | 88 | 668 | 81 | 661 | 2.09e-85 | 283 |
| MsG0480019601.01.T01 | AT1G66170 | 28.145 | 636 | 357 | 16 | 82 | 668 | 69 | 653 | 2.11e-78 | 265 |
| MsG0480019601.01.T01 | AT2G01810 | 33.333 | 255 | 128 | 6 | 81 | 329 | 72 | 290 | 8.79e-36 | 144 |
| MsG0480019601.01.T01 | AT2G01810 | 27.083 | 336 | 195 | 11 | 356 | 668 | 374 | 682 | 3.16e-29 | 124 |
| MsG0480019601.01.T01 | AT2G07714 | 34.746 | 118 | 74 | 1 | 214 | 328 | 1 | 118 | 7.09e-22 | 94.4 |
| MsG0480019601.01.T01 | AT1G32810 | 41.270 | 63 | 34 | 1 | 620 | 682 | 22 | 81 | 4.71e-11 | 67.0 |
Find 174 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGATATTATGGGTTTC+TGG | 0.093213 | 4:+23119915 | MsG0480019601.01.T01:CDS |
| ATGGATTTGTCCAAGAAATT+TGG | 0.108996 | 4:+23120068 | MsG0480019601.01.T01:CDS |
| CTTACAGTCAAGAAGCTTTC+TGG | 0.134184 | 4:-23120916 | None:intergenic |
| GGTAATTGGGGTTATGAATT+TGG | 0.134330 | 4:+23120140 | MsG0480019601.01.T01:CDS |
| GGTCACTTGCTTACACTTAA+TGG | 0.190456 | 4:+23119863 | MsG0480019601.01.T01:CDS |
| GTTACCTTGCTTCAGATAAT+TGG | 0.198863 | 4:-23119636 | None:intergenic |
| GGCATTCATGGTATGGTAAT+TGG | 0.203027 | 4:+23120126 | MsG0480019601.01.T01:CDS |
| TCTCTCTGGATCTGATATTA+TGG | 0.217498 | 4:+23119907 | MsG0480019601.01.T01:CDS |
| CTCTCTGGATCTGATATTAT+GGG | 0.236588 | 4:+23119908 | MsG0480019601.01.T01:CDS |
| CCTGTAATTTATTATGTTCA+TGG | 0.246154 | 4:+23120420 | MsG0480019601.01.T01:CDS |
| CACCCATTTGGCCTCATTAC+AGG | 0.263526 | 4:-23120504 | None:intergenic |
| CTTCTGCCGCCGTGCCGTTC+CGG | 0.264413 | 4:+23118651 | MsG0480019601.01.T01:CDS |
| ATCAGAAATCACTTGCTCTT+TGG | 0.265036 | 4:-23120805 | None:intergenic |
| AATATAGACCAAAGATTAAT+AGG | 0.265549 | 4:+23120874 | MsG0480019601.01.T01:CDS |
| ATAATCCAGCCCAAATTTCT+TGG | 0.276606 | 4:-23120078 | None:intergenic |
| GGTGATGGGTGGTCTTCTTT+AGG | 0.279988 | 4:-23121029 | None:intergenic |
| TTTAGCAGTCTCTGCACTCC+TGG | 0.291770 | 4:-23120378 | None:intergenic |
| GTGACAAGGCAAACTCTTAA+AGG | 0.292184 | 4:+23120524 | MsG0480019601.01.T01:CDS |
| GTAATTGGGGTTATGAATTT+GGG | 0.295494 | 4:+23120141 | MsG0480019601.01.T01:CDS |
| TAGAACCAATTCCAACAAAA+AGG | 0.298710 | 4:-23120342 | None:intergenic |
| TTTGTAGCCGTGAAACTTCT+AGG | 0.308688 | 4:+23121152 | MsG0480019601.01.T01:CDS |
| AGCGATATCACTTCATAATA+AGG | 0.310055 | 4:+23119554 | MsG0480019601.01.T01:CDS |
| GCATTCATGGTATGGTAATT+GGG | 0.312049 | 4:+23120127 | MsG0480019601.01.T01:CDS |
| TGGATTTGTCCAAGAAATTT+GGG | 0.318238 | 4:+23120069 | MsG0480019601.01.T01:CDS |
| TTTGTGCAGCTATGTCTGTT+AGG | 0.338498 | 4:+23119945 | MsG0480019601.01.T01:CDS |
| CTTGTCCTCATTATCGTTCC+AGG | 0.340777 | 4:+23120229 | MsG0480019601.01.T01:CDS |
| CCATGAACATAATAAATTAC+AGG | 0.344829 | 4:-23120420 | None:intergenic |
| CATCTAGTGCTATTGAATTC+AGG | 0.352626 | 4:+23120657 | MsG0480019601.01.T01:CDS |
| GTATACCCTAAAATTCCTTC+TGG | 0.361487 | 4:+23121199 | MsG0480019601.01.T01:CDS |
| TGCCTTCAGCTCTTGAGATC+TGG | 0.370524 | 4:+23120982 | MsG0480019601.01.T01:CDS |
| ATCTGATATTATGGGTTTCT+GGG | 0.378053 | 4:+23119916 | MsG0480019601.01.T01:CDS |
| AGTTTGCCTTGTCACCCATT+TGG | 0.383313 | 4:-23120516 | None:intergenic |
| ATATTATGGGTTTCTGGGAT+AGG | 0.384205 | 4:+23119921 | MsG0480019601.01.T01:CDS |
| TACCGAAGATGCATACAAAA+TGG | 0.385391 | 4:+23120181 | MsG0480019601.01.T01:CDS |
| CGTTCCGGAACGGTGTTTAC+CGG | 0.393085 | 4:+23118666 | MsG0480019601.01.T01:CDS |
| GCCGTGAAACTTCTAGGATA+TGG | 0.393856 | 4:+23121158 | MsG0480019601.01.T01:CDS |
| TGACAAGGCAAACTCTTAAA+GGG | 0.406437 | 4:+23120525 | MsG0480019601.01.T01:CDS |
| GGTTATGAGGTCCTCGATCC+TGG | 0.408649 | 4:-23120247 | None:intergenic |
| GGTGGCTCGTCGCTTCTCTC+TGG | 0.410342 | 4:+23119893 | MsG0480019601.01.T01:CDS |
| AGACTGAAGTCAAGAAGCTC+TGG | 0.412375 | 4:-23120572 | None:intergenic |
| CAGAAATATCTCCGGTGGTT+GGG | 0.414746 | 4:-23118622 | None:intergenic |
| GCAATGGAGCTTAATCCATT+AGG | 0.416846 | 4:-23120771 | None:intergenic |
| CAATTGCCAGAGGGCATTCA+TGG | 0.418503 | 4:+23120114 | MsG0480019601.01.T01:CDS |
| CTTCTGTTCCTCGCTCCATT+CGG | 0.419691 | 4:-23121286 | None:intergenic |
| CGGCACGGCGGCAGAAGCGG+CGG | 0.430200 | 4:-23118645 | None:intergenic |
| TGTGATCAATGTCGTGTTGT+TGG | 0.430361 | 4:+23118860 | MsG0480019601.01.T01:CDS |
| TTGAACTTCAACTGATCCAT+TGG | 0.432275 | 4:-23121228 | None:intergenic |
| GGGGCAGTGGGTAGGCGTAT+TGG | 0.443315 | 4:+23120545 | MsG0480019601.01.T01:CDS |
| ATTAACTCGGGCGGTGGTGA+TGG | 0.444040 | 4:-23121044 | None:intergenic |
| AGATTGGCTCATGTGCCTAA+TGG | 0.445142 | 4:+23120756 | MsG0480019601.01.T01:intron |
| TTACAGGAAGGTTACTGTAA+TGG | 0.445534 | 4:+23120049 | MsG0480019601.01.T01:intron |
| TATACCCTAAAATTCCTTCT+GGG | 0.447265 | 4:+23121200 | MsG0480019601.01.T01:CDS |
| ACTGTCAATTCCCGCACATC+TGG | 0.448303 | 4:-23121396 | None:intergenic |
| GCAAACTCTTAAAGGGGCAG+TGG | 0.450934 | 4:+23120532 | MsG0480019601.01.T01:CDS |
| ACCATATCCTAGAAGTTTCA+CGG | 0.450976 | 4:-23121159 | None:intergenic |
| ATGTGTTTAATTTACAAGCC+TGG | 0.455360 | 4:-23121484 | None:intergenic |
| ACATCTCTTACAAACAAACT+TGG | 0.464117 | 4:-23121435 | None:intergenic |
| CAAGGGAAATCAGTTGCAAA+TGG | 0.466137 | 4:+23120605 | MsG0480019601.01.T01:CDS |
| TCACTTGCTCTTTGGAAGGA+TGG | 0.470398 | 4:-23120797 | None:intergenic |
| TTAGGGTATACTCACGATCT+CGG | 0.470587 | 4:-23121187 | None:intergenic |
| TGACTGTAAGCAATTTATGA+AGG | 0.473976 | 4:+23120929 | MsG0480019601.01.T01:CDS |
| GTGCCTGTAATGAGGCCAAA+TGG | 0.478860 | 4:+23120501 | MsG0480019601.01.T01:CDS |
| CATGGTGTTGTACATGCTAA+TGG | 0.479985 | 4:+23119836 | MsG0480019601.01.T01:CDS |
| CGTGTTGGAGAAGTTGGTGA+TGG | 0.480654 | 4:+23118764 | MsG0480019601.01.T01:CDS |
| CATTTCTGCTGATGATCTTG+AGG | 0.481146 | 4:+23119769 | MsG0480019601.01.T01:CDS |
| TTGCATGATCAGACAGAAAC+CGG | 0.482164 | 4:-23118685 | None:intergenic |
| TAGGGTATACTCACGATCTC+GGG | 0.484605 | 4:-23121186 | None:intergenic |
| GTTGTACATGCTAATGGTTA+TGG | 0.485683 | 4:+23119842 | MsG0480019601.01.T01:CDS |
| GTTCAGTTTCAGCCAAAGAC+TGG | 0.486581 | 4:-23120295 | None:intergenic |
| AAAGAAATAACAGACTGTAC+AGG | 0.488934 | 4:-23120269 | None:intergenic |
| GATGGAGGTGATGTTTCGTC+TGG | 0.488976 | 4:+23118782 | MsG0480019601.01.T01:CDS |
| CTGCTGATGATCTTGAGGAA+TGG | 0.489195 | 4:+23119774 | MsG0480019601.01.T01:CDS |
| TTAGCAGTCTCTGCACTCCT+GGG | 0.490833 | 4:-23120377 | None:intergenic |
| AGGTGATGTTTCGTCTGGTT+TGG | 0.491601 | 4:+23118787 | MsG0480019601.01.T01:CDS |
| CTCTTAAAGGGGCAGTGGGT+AGG | 0.492217 | 4:+23120537 | MsG0480019601.01.T01:CDS |
| TGGCAGATCTTGTTTCGTGT+TGG | 0.492289 | 4:+23118749 | MsG0480019601.01.T01:CDS |
| TGGGGTTATGAATTTGGGAC+TGG | 0.492477 | 4:+23120146 | MsG0480019601.01.T01:CDS |
| GAACGGCACGGCGGCAGAAG+CGG | 0.493751 | 4:-23118648 | None:intergenic |
| CAAAGGCAGCACAATTAACT+CGG | 0.495896 | 4:-23121057 | None:intergenic |
| ATGGGTGGTCTTCTTTAGGA+TGG | 0.498222 | 4:-23121025 | None:intergenic |
| CACCAGTGACTTCATTCAAA+AGG | 0.499059 | 4:-23121097 | None:intergenic |
| CTAAGGATGATGATGGAGAA+AGG | 0.503983 | 4:+23121336 | MsG0480019601.01.T01:CDS |
| CGATGTTGAAGATGTGCAGC+AGG | 0.505393 | 4:+23120451 | MsG0480019601.01.T01:CDS |
| GACTGAAGTCAAGAAGCTCT+GGG | 0.506399 | 4:-23120571 | None:intergenic |
| TTAACTCGGGCGGTGGTGAT+GGG | 0.509645 | 4:-23121043 | None:intergenic |
| TTCCTTCTGGGGTCAACCAA+TGG | 0.511517 | 4:+23121212 | MsG0480019601.01.T01:CDS |
| AATGGATCAGTTGAAGTTCA+AGG | 0.512406 | 4:+23121230 | MsG0480019601.01.T01:CDS |
| GCAGAAATATCTCCGGTGGT+TGG | 0.514722 | 4:-23118623 | None:intergenic |
| TTTCTCTCATTCCCAACCAC+CGG | 0.518527 | 4:+23118611 | MsG0480019601.01.T01:CDS |
| GAAACCGGTAAACACCGTTC+CGG | 0.520178 | 4:-23118670 | None:intergenic |
| CATGTGATACCTGTGGTGTA+TGG | 0.521927 | 4:+23121366 | MsG0480019601.01.T01:CDS |
| TTGTTTCGTGTTGGAGAAGT+TGG | 0.522586 | 4:+23118758 | MsG0480019601.01.T01:CDS |
| TGGAAGGTTGACTGCATTTG+TGG | 0.523381 | 4:+23121311 | MsG0480019601.01.T01:CDS |
| GCCGCCGTGCCGTTCCGGAA+CGG | 0.526524 | 4:+23118656 | MsG0480019601.01.T01:CDS |
| TTTGTCCAAGAAATTTGGGC+TGG | 0.528223 | 4:+23120073 | MsG0480019601.01.T01:CDS |
| GCCAGAGGGCATTCATGGTA+TGG | 0.532503 | 4:+23120119 | MsG0480019601.01.T01:CDS |
| AAGAAATAACAGACTGTACA+GGG | 0.537869 | 4:-23120268 | None:intergenic |
| TTTGGAAGGATGGCTTGCAA+TGG | 0.539310 | 4:-23120787 | None:intergenic |
| GAAATCACTTGCTCTTTGGA+AGG | 0.542791 | 4:-23120801 | None:intergenic |
| ATCCATTGGTTGACCCCAGA+AGG | 0.543065 | 4:-23121214 | None:intergenic |
| TGCCTGTAATGAGGCCAAAT+GGG | 0.548171 | 4:+23120502 | MsG0480019601.01.T01:CDS |
| ACATAATAAATTACAGGGAG+TGG | 0.548311 | 4:-23120414 | None:intergenic |
| CAAAGACCTTGCACTAAATG+TGG | 0.549659 | 4:+23119604 | MsG0480019601.01.T01:CDS |
| AGCACAATTAACTCGGGCGG+TGG | 0.551998 | 4:-23121050 | None:intergenic |
| AATCCGTGTGGGAGATAACC+AGG | 0.554516 | 4:+23121466 | MsG0480019601.01.T01:CDS |
| TGTGCAGCAGGCTTTGATCA+AGG | 0.555297 | 4:+23120463 | MsG0480019601.01.T01:CDS |
| TGACTGCATTTGTGGTACTA+AGG | 0.556557 | 4:+23121319 | MsG0480019601.01.T01:CDS |
| AAGAGGATGTTACGAGGTCG+AGG | 0.557183 | 4:+23118828 | MsG0480019601.01.T01:CDS |
| CACATATTGCAGAGATGAAG+CGG | 0.558172 | 4:+23121502 | MsG0480019601.01.T01:CDS |
| TTCAGTCTTAAGCACTTGCA+AGG | 0.558304 | 4:+23120587 | MsG0480019601.01.T01:CDS |
| TGGAGCGAGGAACAGAAGAA+TGG | 0.559421 | 4:+23121291 | MsG0480019601.01.T01:CDS |
| CTTACACTTAATGGAAGAGA+AGG | 0.560787 | 4:+23119872 | MsG0480019601.01.T01:CDS |
| GAAATCAGTTGCAAATGGAA+TGG | 0.561635 | 4:+23120610 | MsG0480019601.01.T01:CDS |
| CTGGAACGATAATGAGGACA+AGG | 0.564920 | 4:-23120228 | None:intergenic |
| ATCTGCCACGTCATCAGAGA+AGG | 0.565487 | 4:-23118734 | None:intergenic |
| ACTCGGGCGGTGGTGATGGG+TGG | 0.567734 | 4:-23121040 | None:intergenic |
| TGAGAGAAAATCGTAAAGAT+CGG | 0.568309 | 4:-23118597 | None:intergenic |
| GTTGGAGAAGTTGGTGATGG+AGG | 0.568722 | 4:+23118767 | MsG0480019601.01.T01:CDS |
| CACCAGATCTCAAGAGCTGA+AGG | 0.569124 | 4:-23120984 | None:intergenic |
| CATGAACATAATAAATTACA+GGG | 0.569899 | 4:-23120419 | None:intergenic |
| TACTCTTGACATTGTTGAAG+AGG | 0.570128 | 4:+23118811 | MsG0480019601.01.T01:CDS |
| CTCTCCAATTATCTGAAGCA+AGG | 0.571531 | 4:+23119632 | MsG0480019601.01.T01:CDS |
| ACCATACCATGAATGCCCTC+TGG | 0.571735 | 4:-23120120 | None:intergenic |
| ACAGACTGTACAGGGTTATG+AGG | 0.572142 | 4:-23120260 | None:intergenic |
| GGAGTTCCACATTTAGTGCA+AGG | 0.575869 | 4:-23119610 | None:intergenic |
| GAATTCAATAGCACTAGATG+TGG | 0.582215 | 4:-23120654 | None:intergenic |
| TCGATCCTGGAACGATAATG+AGG | 0.584434 | 4:-23120234 | None:intergenic |
| TGCTTCATGCAATTGCCAGA+GGG | 0.584514 | 4:+23120105 | MsG0480019601.01.T01:CDS |
| TAATGAGGACAAGGGCATGT+TGG | 0.585828 | 4:-23120219 | None:intergenic |
| GCGGGAATTGACAGTGCTGA+TGG | 0.589445 | 4:+23121404 | MsG0480019601.01.T01:CDS |
| CTCTTACAAACAAACTTGGA+CGG | 0.590420 | 4:-23121431 | None:intergenic |
| AGGTCTTTGATATGCTGCAT+TGG | 0.594618 | 4:-23119590 | None:intergenic |
| GCGAGGAACAGAAGAATGGA+AGG | 0.594898 | 4:+23121295 | MsG0480019601.01.T01:CDS |
| CTTGCTTCAGATAATTGGAG+AGG | 0.597599 | 4:-23119631 | None:intergenic |
| TTGCTTCATGCAATTGCCAG+AGG | 0.599692 | 4:+23120104 | MsG0480019601.01.T01:CDS |
| TGGCTTAGCACGATTCCGAA+TGG | 0.602115 | 4:+23121271 | MsG0480019601.01.T01:CDS |
| CGGTAAACACCGTTCCGGAA+CGG | 0.603326 | 4:-23118665 | None:intergenic |
| TGTGGTACTAAGGATGATGA+TGG | 0.607260 | 4:+23121329 | MsG0480019601.01.T01:CDS |
| AGCGGCGGCAGAAATATCTC+CGG | 0.607386 | 4:-23118630 | None:intergenic |
| CATTCATGGTATGGTAATTG+GGG | 0.608012 | 4:+23120128 | MsG0480019601.01.T01:CDS |
| ACACTTAATGGAAGAGAAGG+TGG | 0.608347 | 4:+23119875 | MsG0480019601.01.T01:CDS |
| GGGTCTTTCGTTCATAACCA+TGG | 0.609508 | 4:-23118546 | None:intergenic |
| CGGGAATTGACAGTGCTGAT+GGG | 0.611869 | 4:+23121405 | MsG0480019601.01.T01:CDS |
| TGGCTGCATACCAGATGTGC+GGG | 0.613540 | 4:+23121386 | MsG0480019601.01.T01:CDS |
| ATGAGGCCAAATGGGTGACA+AGG | 0.617957 | 4:+23120510 | MsG0480019601.01.T01:CDS |
| GGTTTCTGTCTGATCATGCA+AGG | 0.619590 | 4:+23118687 | MsG0480019601.01.T01:CDS |
| CAAACTCTTAAAGGGGCAGT+GGG | 0.620060 | 4:+23120533 | MsG0480019601.01.T01:CDS |
| TGCATCAAGTGCCTGTAATG+AGG | 0.624858 | 4:+23120493 | MsG0480019601.01.T01:CDS |
| TCAGTCTTAAGCACTTGCAA+GGG | 0.628349 | 4:+23120588 | MsG0480019601.01.T01:CDS |
| AAAGGCAGCACAATTAACTC+GGG | 0.629422 | 4:-23121056 | None:intergenic |
| ATACCCTAAAATTCCTTCTG+GGG | 0.630508 | 4:+23121201 | MsG0480019601.01.T01:CDS |
| GGTATGCAGCCATACACCAC+AGG | 0.631127 | 4:-23121375 | None:intergenic |
| TCATTATCGTTCCAGGATCG+AGG | 0.631565 | 4:+23120236 | MsG0480019601.01.T01:CDS |
| GCACGATTCCGAATGGAGCG+AGG | 0.632953 | 4:+23121278 | MsG0480019601.01.T01:CDS |
| TCGACATTAGTAGCATTCAA+AGG | 0.636288 | 4:-23121074 | None:intergenic |
| AACACCGTTCCGGAACGGCA+CGG | 0.638834 | 4:-23118660 | None:intergenic |
| AACAACACACATCTTCTGCA+TGG | 0.642554 | 4:+23119818 | MsG0480019601.01.T01:CDS |
| AATTCAATAGCACTAGATGT+GGG | 0.647489 | 4:-23120653 | None:intergenic |
| TGATATCGCTTTCGACACAC+AGG | 0.648182 | 4:-23119541 | None:intergenic |
| GGCAGCACAATTAACTCGGG+CGG | 0.652831 | 4:-23121053 | None:intergenic |
| GACAAGGCAAACTCTTAAAG+GGG | 0.656461 | 4:+23120526 | MsG0480019601.01.T01:CDS |
| TGTGTTAACTCAATCCGTGT+GGG | 0.658395 | 4:+23121455 | MsG0480019601.01.T01:CDS |
| GGCGGCAGAAATATCTCCGG+TGG | 0.667058 | 4:-23118627 | None:intergenic |
| ATGTGTTAACTCAATCCGTG+TGG | 0.672293 | 4:+23121454 | MsG0480019601.01.T01:CDS |
| TGGAACGATAATGAGGACAA+GGG | 0.680396 | 4:-23120227 | None:intergenic |
| AAGAGCTGAAGGCAGCTCCG+TGG | 0.682413 | 4:-23120973 | None:intergenic |
| AAGCCTGGTTATCTCCCACA+CGG | 0.684838 | 4:-23121469 | None:intergenic |
| CAAAATCGAGCAAATGACCA+CGG | 0.695893 | 4:+23120956 | MsG0480019601.01.T01:CDS |
| ATGGCTGCATACCAGATGTG+CGG | 0.705208 | 4:+23121385 | MsG0480019601.01.T01:CDS |
| ACTGAAGTCAAGAAGCTCTG+GGG | 0.722625 | 4:-23120570 | None:intergenic |
| ACCGTTCCGGAACGGCACGG+CGG | 0.727611 | 4:-23118657 | None:intergenic |
| ATATTGCAGAGATGAAGCGG+TGG | 0.735388 | 4:+23121505 | MsG0480019601.01.T01:CDS |
| ATGTTAGCATGTGATACCTG+TGG | 0.742288 | 4:+23121359 | MsG0480019601.01.T01:CDS |
| TTGTTGAAGAGGATGTTACG+AGG | 0.760276 | 4:+23118822 | MsG0480019601.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAAAAAATGTGAATTT+TGG | + | Chr4:23121554-23121573 | MsG0480019601.01.T01:CDS | 10.0% |
| !!! | TTATTTTCTATTTTTTTTTG+GGG | + | Chr4:23118924-23118943 | MsG0480019601.01.T01:intron | 10.0% |
| !! | GAAAAAAAAAACTGTAATAT+AGG | - | Chr4:23119026-23119045 | None:intergenic | 15.0% |
| !! | TTTCAAATTTACTGAAATTT+AGG | + | Chr4:23119225-23119244 | MsG0480019601.01.T01:intron | 15.0% |
| !!! | TATATTTGATCATTTTTTCA+GGG | - | Chr4:23120860-23120879 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTACAACTAAC+AGG | - | Chr4:23121545-23121564 | None:intergenic | 15.0% |
| !! | AATATAGACCAAAGATTAAT+AGG | + | Chr4:23120874-23120893 | MsG0480019601.01.T01:CDS | 20.0% |
| !! | CATGAACATAATAAATTACA+GGG | - | Chr4:23120422-23120441 | None:intergenic | 20.0% |
| !!! | ATTGTGCTATAAATTTTTAC+AGG | + | Chr4:23120033-23120052 | MsG0480019601.01.T01:intron | 20.0% |
| !!! | CTATATTTGATCATTTTTTC+AGG | - | Chr4:23120861-23120880 | None:intergenic | 20.0% |
| !!! | TTGTTGATTGAAAAAAACAA+AGG | + | Chr4:23119505-23119524 | MsG0480019601.01.T01:intron | 20.0% |
| !!! | TTTTTTTTTTCAAACTACGT+AGG | + | Chr4:23119035-23119054 | MsG0480019601.01.T01:intron | 20.0% |
| ! | CCATGAACATAATAAATTAC+AGG | - | Chr4:23120423-23120442 | None:intergenic | 25.0% |
| ! | CCTGTAATTTATTATGTTCA+TGG | + | Chr4:23120420-23120439 | MsG0480019601.01.T01:CDS | 25.0% |
| ! | GATTATATAAAACATCAGCT+GGG | - | Chr4:23120730-23120749 | None:intergenic | 25.0% |
| ! | TGATTGAAAAAAACAAAGGA+TGG | + | Chr4:23119509-23119528 | MsG0480019601.01.T01:intron | 25.0% |
| ! | TTATATAATCCTTGACAGAT+TGG | + | Chr4:23120740-23120759 | MsG0480019601.01.T01:intron | 25.0% |
| !! | ACTGTTTTCCTATTAATCTT+TGG | - | Chr4:23120885-23120904 | None:intergenic | 25.0% |
| !! | TAGTACTATGATAATGATGT+GGG | + | Chr4:23119414-23119433 | MsG0480019601.01.T01:intron | 25.0% |
| !! | TATTTCTTTTTACCAGTCTT+TGG | + | Chr4:23120283-23120302 | MsG0480019601.01.T01:CDS | 25.0% |
| !! | TGCTATAAATTTTTACAGGA+AGG | + | Chr4:23120037-23120056 | MsG0480019601.01.T01:intron | 25.0% |
| !! | TTAGTACTATGATAATGATG+TGG | + | Chr4:23119413-23119432 | MsG0480019601.01.T01:intron | 25.0% |
| !!! | TTTTCTATTTTTTTTTGGGG+AGG | + | Chr4:23118927-23118946 | MsG0480019601.01.T01:intron | 25.0% |
| AAAATATATACAGTTGAGCC+AGG | - | Chr4:23118995-23119014 | None:intergenic | 30.0% | |
| AAAGAAATAACAGACTGTAC+AGG | - | Chr4:23120272-23120291 | None:intergenic | 30.0% | |
| AAGAAATAACAGACTGTACA+GGG | - | Chr4:23120271-23120290 | None:intergenic | 30.0% | |
| AATTCAATAGCACTAGATGT+GGG | - | Chr4:23120656-23120675 | None:intergenic | 30.0% | |
| ACATAATAAATTACAGGGAG+TGG | - | Chr4:23120417-23120436 | None:intergenic | 30.0% | |
| ACATCTCTTACAAACAAACT+TGG | - | Chr4:23121438-23121457 | None:intergenic | 30.0% | |
| AGCGATATCACTTCATAATA+AGG | + | Chr4:23119554-23119573 | MsG0480019601.01.T01:CDS | 30.0% | |
| AGTTTGAAGGATTGAAATTG+TGG | + | Chr4:23119709-23119728 | MsG0480019601.01.T01:intron | 30.0% | |
| ATCTGATATTATGGGTTTCT+GGG | + | Chr4:23119916-23119935 | MsG0480019601.01.T01:CDS | 30.0% | |
| ATCTTCAAAGTTAACCACTA+TGG | - | Chr4:23119317-23119336 | None:intergenic | 30.0% | |
| ATGGATTTGTCCAAGAAATT+TGG | + | Chr4:23120068-23120087 | MsG0480019601.01.T01:CDS | 30.0% | |
| GAAGCAACTATTCACAAAAA+AGG | - | Chr4:23120699-23120718 | None:intergenic | 30.0% | |
| GGATTATATAAAACATCAGC+TGG | - | Chr4:23120731-23120750 | None:intergenic | 30.0% | |
| GTAATTGGGGTTATGAATTT+GGG | + | Chr4:23120141-23120160 | MsG0480019601.01.T01:CDS | 30.0% | |
| TAGAACCAATTCCAACAAAA+AGG | - | Chr4:23120345-23120364 | None:intergenic | 30.0% | |
| TATACCCTAAAATTCCTTCT+GGG | + | Chr4:23121200-23121219 | MsG0480019601.01.T01:CDS | 30.0% | |
| TGACTGTAAGCAATTTATGA+AGG | + | Chr4:23120929-23120948 | MsG0480019601.01.T01:CDS | 30.0% | |
| TGAGAGAAAATCGTAAAGAT+CGG | - | Chr4:23118600-23118619 | None:intergenic | 30.0% | |
| TGGATTTGTCCAAGAAATTT+GGG | + | Chr4:23120069-23120088 | MsG0480019601.01.T01:CDS | 30.0% | |
| TTGAATTCAGGTAAGAGTAA+TGG | + | Chr4:23120669-23120688 | MsG0480019601.01.T01:intron | 30.0% | |
| ! | ATGTGTTTAATTTACAAGCC+TGG | - | Chr4:23121487-23121506 | None:intergenic | 30.0% |
| ! | TTGCATTTTGCTTCAGATTT+TGG | + | Chr4:23119994-23120013 | MsG0480019601.01.T01:intron | 30.0% |
| !!! | ATTATTTTGATGTACACACC+TGG | + | Chr4:23118974-23118993 | MsG0480019601.01.T01:intron | 30.0% |
| AATGGATCAGTTGAAGTTCA+AGG | + | Chr4:23121230-23121249 | MsG0480019601.01.T01:CDS | 35.0% | |
| ACCATATCCTAGAAGTTTCA+CGG | - | Chr4:23121162-23121181 | None:intergenic | 35.0% | |
| ATAATCCAGCCCAAATTTCT+TGG | - | Chr4:23120081-23120100 | None:intergenic | 35.0% | |
| ATACCCTAAAATTCCTTCTG+GGG | + | Chr4:23121201-23121220 | MsG0480019601.01.T01:CDS | 35.0% | |
| ATCAGAAATCACTTGCTCTT+TGG | - | Chr4:23120808-23120827 | None:intergenic | 35.0% | |
| CAAAGTTAACCACTATGGTT+TGG | - | Chr4:23119312-23119331 | None:intergenic | 35.0% | |
| CATTCATGGTATGGTAATTG+GGG | + | Chr4:23120128-23120147 | MsG0480019601.01.T01:CDS | 35.0% | |
| CTCTCTGGATCTGATATTAT+GGG | + | Chr4:23119908-23119927 | MsG0480019601.01.T01:CDS | 35.0% | |
| CTCTTACAAACAAACTTGGA+CGG | - | Chr4:23121434-23121453 | None:intergenic | 35.0% | |
| CTTACACTTAATGGAAGAGA+AGG | + | Chr4:23119872-23119891 | MsG0480019601.01.T01:CDS | 35.0% | |
| GAAATCAGTTGCAAATGGAA+TGG | + | Chr4:23120610-23120629 | MsG0480019601.01.T01:CDS | 35.0% | |
| GAATTCAATAGCACTAGATG+TGG | - | Chr4:23120657-23120676 | None:intergenic | 35.0% | |
| GATCTGATATTATGGGTTTC+TGG | + | Chr4:23119915-23119934 | MsG0480019601.01.T01:CDS | 35.0% | |
| GATTGGGATAAGTAGTTTGA+AGG | + | Chr4:23119696-23119715 | MsG0480019601.01.T01:intron | 35.0% | |
| GCATTCATGGTATGGTAATT+GGG | + | Chr4:23120127-23120146 | MsG0480019601.01.T01:CDS | 35.0% | |
| GGTAATTGGGGTTATGAATT+TGG | + | Chr4:23120140-23120159 | MsG0480019601.01.T01:CDS | 35.0% | |
| GTATACCCTAAAATTCCTTC+TGG | + | Chr4:23121199-23121218 | MsG0480019601.01.T01:CDS | 35.0% | |
| GTTACCTTGCTTCAGATAAT+TGG | - | Chr4:23119639-23119658 | None:intergenic | 35.0% | |
| GTTGTACATGCTAATGGTTA+TGG | + | Chr4:23119842-23119861 | MsG0480019601.01.T01:CDS | 35.0% | |
| TACCGAAGATGCATACAAAA+TGG | + | Chr4:23120181-23120200 | MsG0480019601.01.T01:CDS | 35.0% | |
| TACTCTTGACATTGTTGAAG+AGG | + | Chr4:23118811-23118830 | MsG0480019601.01.T01:CDS | 35.0% | |
| TCGACATTAGTAGCATTCAA+AGG | - | Chr4:23121077-23121096 | None:intergenic | 35.0% | |
| TCTCTCTGGATCTGATATTA+TGG | + | Chr4:23119907-23119926 | MsG0480019601.01.T01:CDS | 35.0% | |
| TGACAAGGCAAACTCTTAAA+GGG | + | Chr4:23120525-23120544 | MsG0480019601.01.T01:CDS | 35.0% | |
| TTACAGGAAGGTTACTGTAA+TGG | + | Chr4:23120049-23120068 | MsG0480019601.01.T01:intron | 35.0% | |
| TTGAACTTCAACTGATCCAT+TGG | - | Chr4:23121231-23121250 | None:intergenic | 35.0% | |
| ! | AGATCTCTTCTCCTTTTTGT+TGG | + | Chr4:23120331-23120350 | MsG0480019601.01.T01:CDS | 35.0% |
| ! | CATCTAGTGCTATTGAATTC+AGG | + | Chr4:23120657-23120676 | MsG0480019601.01.T01:CDS | 35.0% |
| ! | CTTCACACTGTTGTTTGATT+GGG | + | Chr4:23119680-23119699 | MsG0480019601.01.T01:intron | 35.0% |
| ! | CTTCTCCTTTTTGTTGGAAT+TGG | + | Chr4:23120337-23120356 | MsG0480019601.01.T01:CDS | 35.0% |
| ! | TTCTAAATTTTCGTAAGCCC+AGG | + | Chr4:23120360-23120379 | MsG0480019601.01.T01:CDS | 35.0% |
| ! | TTGTGGTTTGATATTTCTGC+AGG | + | Chr4:23119726-23119745 | MsG0480019601.01.T01:intron | 35.0% |
| !! | ATATTATGGGTTTCTGGGAT+AGG | + | Chr4:23119921-23119940 | MsG0480019601.01.T01:CDS | 35.0% |
| !!! | TGCCATTTTGTATGCATCTT+CGG | - | Chr4:23120186-23120205 | None:intergenic | 35.0% |
| AAAGGCAGCACAATTAACTC+GGG | - | Chr4:23121059-23121078 | None:intergenic | 40.0% | |
| AAAGTCAGACCAAACCATAG+TGG | + | Chr4:23119300-23119319 | MsG0480019601.01.T01:intron | 40.0% | |
| AACAACACACATCTTCTGCA+TGG | + | Chr4:23119818-23119837 | MsG0480019601.01.T01:CDS | 40.0% | |
| ACACTTAATGGAAGAGAAGG+TGG | + | Chr4:23119875-23119894 | MsG0480019601.01.T01:CDS | 40.0% | |
| AGGTCTTTGATATGCTGCAT+TGG | - | Chr4:23119593-23119612 | None:intergenic | 40.0% | |
| ATCAGAGAAGGAAAAAGCTC+AGG | - | Chr4:23118725-23118744 | None:intergenic | 40.0% | |
| ATGTGTTAACTCAATCCGTG+TGG | + | Chr4:23121454-23121473 | MsG0480019601.01.T01:CDS | 40.0% | |
| ATGTTAGCATGTGATACCTG+TGG | + | Chr4:23121359-23121378 | MsG0480019601.01.T01:CDS | 40.0% | |
| CAAAATCGAGCAAATGACCA+CGG | + | Chr4:23120956-23120975 | MsG0480019601.01.T01:CDS | 40.0% | |
| CAAACAACAGTGTGAAGGTA+AGG | - | Chr4:23119677-23119696 | None:intergenic | 40.0% | |
| CAAAGACCTTGCACTAAATG+TGG | + | Chr4:23119604-23119623 | MsG0480019601.01.T01:CDS | 40.0% | |
| CAAAGGCAGCACAATTAACT+CGG | - | Chr4:23121060-23121079 | None:intergenic | 40.0% | |
| CAAGGGAAATCAGTTGCAAA+TGG | + | Chr4:23120605-23120624 | MsG0480019601.01.T01:CDS | 40.0% | |
| CACATATTGCAGAGATGAAG+CGG | + | Chr4:23121502-23121521 | MsG0480019601.01.T01:CDS | 40.0% | |
| CACCAGTGACTTCATTCAAA+AGG | - | Chr4:23121100-23121119 | None:intergenic | 40.0% | |
| CATTTCTGCTGATGATCTTG+AGG | + | Chr4:23119769-23119788 | MsG0480019601.01.T01:CDS | 40.0% | |
| CCAATCAAACAACAGTGTGA+AGG | - | Chr4:23119682-23119701 | None:intergenic | 40.0% | |
| CTTACAGTCAAGAAGCTTTC+TGG | - | Chr4:23120919-23120938 | None:intergenic | 40.0% | |
| CTTGCTTCAGATAATTGGAG+AGG | - | Chr4:23119634-23119653 | None:intergenic | 40.0% | |
| GAAATCACTTGCTCTTTGGA+AGG | - | Chr4:23120804-23120823 | None:intergenic | 40.0% | |
| GAATCGTTGAGTCAGATTCT+CGG | + | Chr4:23118889-23118908 | MsG0480019601.01.T01:intron | 40.0% | |
| GACAAGGCAAACTCTTAAAG+GGG | + | Chr4:23120526-23120545 | MsG0480019601.01.T01:CDS | 40.0% | |
| GCAATGGAGCTTAATCCATT+AGG | - | Chr4:23120774-23120793 | None:intergenic | 40.0% | |
| GGCATTCATGGTATGGTAAT+TGG | + | Chr4:23120126-23120145 | MsG0480019601.01.T01:CDS | 40.0% | |
| GGTCACTTGCTTACACTTAA+TGG | + | Chr4:23119863-23119882 | MsG0480019601.01.T01:CDS | 40.0% | |
| GTGACAAGGCAAACTCTTAA+AGG | + | Chr4:23120524-23120543 | MsG0480019601.01.T01:CDS | 40.0% | |
| TCAGTCTTAAGCACTTGCAA+GGG | + | Chr4:23120588-23120607 | MsG0480019601.01.T01:CDS | 40.0% | |
| TGACTGCATTTGTGGTACTA+AGG | + | Chr4:23121319-23121338 | MsG0480019601.01.T01:CDS | 40.0% | |
| TGGAACGATAATGAGGACAA+GGG | - | Chr4:23120230-23120249 | None:intergenic | 40.0% | |
| TGTGATCAATGTCGTGTTGT+TGG | + | Chr4:23118860-23118879 | MsG0480019601.01.T01:CDS | 40.0% | |
| TGTGGTACTAAGGATGATGA+TGG | + | Chr4:23121329-23121348 | MsG0480019601.01.T01:CDS | 40.0% | |
| TGTGTTAACTCAATCCGTGT+GGG | + | Chr4:23121455-23121474 | MsG0480019601.01.T01:CDS | 40.0% | |
| TTAGGGTATACTCACGATCT+CGG | - | Chr4:23121190-23121209 | None:intergenic | 40.0% | |
| TTCAGTCTTAAGCACTTGCA+AGG | + | Chr4:23120587-23120606 | MsG0480019601.01.T01:CDS | 40.0% | |
| TTGCATGATCAGACAGAAAC+CGG | - | Chr4:23118688-23118707 | None:intergenic | 40.0% | |
| TTGTTGAAGAGGATGTTACG+AGG | + | Chr4:23118822-23118841 | MsG0480019601.01.T01:CDS | 40.0% | |
| TTGTTTCGTGTTGGAGAAGT+TGG | + | Chr4:23118758-23118777 | MsG0480019601.01.T01:CDS | 40.0% | |
| TTTGTAGCCGTGAAACTTCT+AGG | + | Chr4:23121152-23121171 | MsG0480019601.01.T01:CDS | 40.0% | |
| TTTGTCCAAGAAATTTGGGC+TGG | + | Chr4:23120073-23120092 | MsG0480019601.01.T01:CDS | 40.0% | |
| TTTGTGCAGCTATGTCTGTT+AGG | + | Chr4:23119945-23119964 | MsG0480019601.01.T01:CDS | 40.0% | |
| ! | CCTTCACACTGTTGTTTGAT+TGG | + | Chr4:23119679-23119698 | MsG0480019601.01.T01:intron | 40.0% |
| ! | CTCTCCAATTATCTGAAGCA+AGG | + | Chr4:23119632-23119651 | MsG0480019601.01.T01:CDS | 40.0% |
| ! | GACCTTTTGAATGAAGTCAC+TGG | + | Chr4:23121095-23121114 | MsG0480019601.01.T01:CDS | 40.0% |
| ! | TGACCCCAGAAGGAATTTTA+GGG | - | Chr4:23121207-23121226 | None:intergenic | 40.0% |
| ! | TTGACCCCAGAAGGAATTTT+AGG | - | Chr4:23121208-23121227 | None:intergenic | 40.0% |
| !! | CATGGTGTTGTACATGCTAA+TGG | + | Chr4:23119836-23119855 | MsG0480019601.01.T01:CDS | 40.0% |
| !! | CTAAGGATGATGATGGAGAA+AGG | + | Chr4:23121336-23121355 | MsG0480019601.01.T01:CDS | 40.0% |
| !! | CTTCTTTTGACTCGCTTAGT+GGG | - | Chr4:23118569-23118588 | None:intergenic | 40.0% |
| !! | GGTTGGTGGATATGGAATTA+TGG | + | Chr4:23119453-23119472 | MsG0480019601.01.T01:intron | 40.0% |
| !! | TCTTCTTTTGACTCGCTTAG+TGG | - | Chr4:23118570-23118589 | None:intergenic | 40.0% |
| !! | TTTTTCCTTCTCTGATGACG+TGG | + | Chr4:23118729-23118748 | MsG0480019601.01.T01:CDS | 40.0% |
| !!! | AGTCACTGGTGTTTTTCAAG+AGG | + | Chr4:23121109-23121128 | MsG0480019601.01.T01:CDS | 40.0% |
| !!! | GTGCTAAGCCATTTTTAGCT+GGG | - | Chr4:23121262-23121281 | None:intergenic | 40.0% |
| ACAGACTGTACAGGGTTATG+AGG | - | Chr4:23120263-23120282 | None:intergenic | 45.0% | |
| ACTGAAGTCAAGAAGCTCTG+GGG | - | Chr4:23120573-23120592 | None:intergenic | 45.0% | |
| AGACTGAAGTCAAGAAGCTC+TGG | - | Chr4:23120575-23120594 | None:intergenic | 45.0% | |
| AGAGAAGGAAAAAGCTCAGG+AGG | - | Chr4:23118722-23118741 | None:intergenic | 45.0% | |
| AGGTGATGTTTCGTCTGGTT+TGG | + | Chr4:23118787-23118806 | MsG0480019601.01.T01:CDS | 45.0% | |
| AGTTTGCCTTGTCACCCATT+TGG | - | Chr4:23120519-23120538 | None:intergenic | 45.0% | |
| ATATTGCAGAGATGAAGCGG+TGG | + | Chr4:23121505-23121524 | MsG0480019601.01.T01:CDS | 45.0% | |
| CAAACTCTTAAAGGGGCAGT+GGG | + | Chr4:23120533-23120552 | MsG0480019601.01.T01:CDS | 45.0% | |
| CAGAAATATCTCCGGTGGTT+GGG | - | Chr4:23118625-23118644 | None:intergenic | 45.0% | |
| CATGTGATACCTGTGGTGTA+TGG | + | Chr4:23121366-23121385 | MsG0480019601.01.T01:CDS | 45.0% | |
| CTGCTGATGATCTTGAGGAA+TGG | + | Chr4:23119774-23119793 | MsG0480019601.01.T01:CDS | 45.0% | |
| CTGGAACGATAATGAGGACA+AGG | - | Chr4:23120231-23120250 | None:intergenic | 45.0% | |
| CTTGTCCTCATTATCGTTCC+AGG | + | Chr4:23120229-23120248 | MsG0480019601.01.T01:CDS | 45.0% | |
| GACTGAAGTCAAGAAGCTCT+GGG | - | Chr4:23120574-23120593 | None:intergenic | 45.0% | |
| GAGTCAGATTCTCGGTTCTT+AGG | + | Chr4:23118897-23118916 | MsG0480019601.01.T01:intron | 45.0% | |
| GATCATGTGATGTGGTTGGT+TGG | + | Chr4:23119436-23119455 | MsG0480019601.01.T01:intron | 45.0% | |
| GGAGAATGCCCAGCTAAAAA+TGG | + | Chr4:23121251-23121270 | MsG0480019601.01.T01:CDS | 45.0% | |
| GGAGTTCCACATTTAGTGCA+AGG | - | Chr4:23119613-23119632 | None:intergenic | 45.0% | |
| GGTTTCTGTCTGATCATGCA+AGG | + | Chr4:23118687-23118706 | MsG0480019601.01.T01:CDS | 45.0% | |
| GTTCAGTTTCAGCCAAAGAC+TGG | - | Chr4:23120298-23120317 | None:intergenic | 45.0% | |
| TAGGGTATACTCACGATCTC+GGG | - | Chr4:23121189-23121208 | None:intergenic | 45.0% | |
| TCATTATCGTTCCAGGATCG+AGG | + | Chr4:23120236-23120255 | MsG0480019601.01.T01:CDS | 45.0% | |
| TCGATCCTGGAACGATAATG+AGG | - | Chr4:23120237-23120256 | None:intergenic | 45.0% | |
| TGATATCGCTTTCGACACAC+AGG | - | Chr4:23119544-23119563 | None:intergenic | 45.0% | |
| TGATGTGGGATCATGTGATG+TGG | + | Chr4:23119428-23119447 | MsG0480019601.01.T01:intron | 45.0% | |
| TGCATCAAGTGCCTGTAATG+AGG | + | Chr4:23120493-23120512 | MsG0480019601.01.T01:CDS | 45.0% | |
| TGCCTGTAATGAGGCCAAAT+GGG | + | Chr4:23120502-23120521 | MsG0480019601.01.T01:CDS | 45.0% | |
| TGCTTCATGCAATTGCCAGA+GGG | + | Chr4:23120105-23120124 | MsG0480019601.01.T01:CDS | 45.0% | |
| TGGAAGGTTGACTGCATTTG+TGG | + | Chr4:23121311-23121330 | MsG0480019601.01.T01:CDS | 45.0% | |
| TTGCTTCATGCAATTGCCAG+AGG | + | Chr4:23120104-23120123 | MsG0480019601.01.T01:CDS | 45.0% | |
| TTTCTCTCATTCCCAACCAC+CGG | + | Chr4:23118611-23118630 | MsG0480019601.01.T01:CDS | 45.0% | |
| ! | AGATTGGCTCATGTGCCTAA+TGG | + | Chr4:23120756-23120775 | MsG0480019601.01.T01:intron | 45.0% |
| ! | ATGGGTGGTCTTCTTTAGGA+TGG | - | Chr4:23121028-23121047 | None:intergenic | 45.0% |
| ! | TAATGAGGACAAGGGCATGT+TGG | - | Chr4:23120222-23120241 | None:intergenic | 45.0% |
| ! | TCACTTGCTCTTTGGAAGGA+TGG | - | Chr4:23120800-23120819 | None:intergenic | 45.0% |
| ! | TGGCAGATCTTGTTTCGTGT+TGG | + | Chr4:23118749-23118768 | MsG0480019601.01.T01:CDS | 45.0% |
| ! | TGGGGTTATGAATTTGGGAC+TGG | + | Chr4:23120146-23120165 | MsG0480019601.01.T01:CDS | 45.0% |
| ! | TTTGGAAGGATGGCTTGCAA+TGG | - | Chr4:23120790-23120809 | None:intergenic | 45.0% |
| !! | ATGTGGTTGGTTGGTGGATA+TGG | + | Chr4:23119445-23119464 | MsG0480019601.01.T01:intron | 45.0% |
| !! | GCCGTGAAACTTCTAGGATA+TGG | + | Chr4:23121158-23121177 | MsG0480019601.01.T01:CDS | 45.0% |
| !!! | CGTGCTAAGCCATTTTTAGC+TGG | - | Chr4:23121263-23121282 | None:intergenic | 45.0% |
| !!! | TTTATTTTCTATTTTTTTTT+GGG | + | Chr4:23118923-23118942 | MsG0480019601.01.T01:intron | 5.0% |
| !!! | TTTTATTTTCTATTTTTTTT+TGG | + | Chr4:23118922-23118941 | MsG0480019601.01.T01:intron | 5.0% |
| AAGAGGATGTTACGAGGTCG+AGG | + | Chr4:23118828-23118847 | MsG0480019601.01.T01:CDS | 50.0% | |
| AAGCCTGGTTATCTCCCACA+CGG | - | Chr4:23121472-23121491 | None:intergenic | 50.0% | |
| AATCCGTGTGGGAGATAACC+AGG | + | Chr4:23121466-23121485 | MsG0480019601.01.T01:CDS | 50.0% | |
| ACCATACCATGAATGCCCTC+TGG | - | Chr4:23120123-23120142 | None:intergenic | 50.0% | |
| ACTGTCAATTCCCGCACATC+TGG | - | Chr4:23121399-23121418 | None:intergenic | 50.0% | |
| ATCTGCCACGTCATCAGAGA+AGG | - | Chr4:23118737-23118756 | None:intergenic | 50.0% | |
| ATGAGGCCAAATGGGTGACA+AGG | + | Chr4:23120510-23120529 | MsG0480019601.01.T01:CDS | 50.0% | |
| ATGGCTGCATACCAGATGTG+CGG | + | Chr4:23121385-23121404 | MsG0480019601.01.T01:CDS | 50.0% | |
| CACCAGATCTCAAGAGCTGA+AGG | - | Chr4:23120987-23121006 | None:intergenic | 50.0% | |
| CACCCATTTGGCCTCATTAC+AGG | - | Chr4:23120507-23120526 | None:intergenic | 50.0% | |
| CGATGTTGAAGATGTGCAGC+AGG | + | Chr4:23120451-23120470 | MsG0480019601.01.T01:CDS | 50.0% | |
| CTTCTGTTCCTCGCTCCATT+CGG | - | Chr4:23121289-23121308 | None:intergenic | 50.0% | |
| GAAACCGGTAAACACCGTTC+CGG | - | Chr4:23118673-23118692 | None:intergenic | 50.0% | |
| GATGGAGGTGATGTTTCGTC+TGG | + | Chr4:23118782-23118801 | MsG0480019601.01.T01:CDS | 50.0% | |
| GCAAACTCTTAAAGGGGCAG+TGG | + | Chr4:23120532-23120551 | MsG0480019601.01.T01:CDS | 50.0% | |
| GCACATGAGCCAATCTGTCA+AGG | - | Chr4:23120752-23120771 | None:intergenic | 50.0% | |
| GCAGAAATATCTCCGGTGGT+TGG | - | Chr4:23118626-23118645 | None:intergenic | 50.0% | |
| GCGAGGAACAGAAGAATGGA+AGG | + | Chr4:23121295-23121314 | MsG0480019601.01.T01:CDS | 50.0% | |
| GTGCCTGTAATGAGGCCAAA+TGG | + | Chr4:23120501-23120520 | MsG0480019601.01.T01:CDS | 50.0% | |
| GTGGGATCATGTGATGTGGT+TGG | + | Chr4:23119432-23119451 | MsG0480019601.01.T01:intron | 50.0% | |
| TGCCTTCAGCTCTTGAGATC+TGG | + | Chr4:23120982-23121001 | MsG0480019601.01.T01:CDS | 50.0% | |
| TGGAGCGAGGAACAGAAGAA+TGG | + | Chr4:23121291-23121310 | MsG0480019601.01.T01:CDS | 50.0% | |
| TGGCTTAGCACGATTCCGAA+TGG | + | Chr4:23121271-23121290 | MsG0480019601.01.T01:CDS | 50.0% | |
| TTAGCAGTCTCTGCACTCCT+GGG | - | Chr4:23120380-23120399 | None:intergenic | 50.0% | |
| TTTAGCAGTCTCTGCACTCC+TGG | - | Chr4:23120381-23120400 | None:intergenic | 50.0% | |
| ! | ATCCATTGGTTGACCCCAGA+AGG | - | Chr4:23121217-23121236 | None:intergenic | 50.0% |
| ! | CATGTGATGTGGTTGGTTGG+TGG | + | Chr4:23119439-23119458 | MsG0480019601.01.T01:intron | 50.0% |
| ! | TGTGCAGCAGGCTTTGATCA+AGG | + | Chr4:23120463-23120482 | MsG0480019601.01.T01:CDS | 50.0% |
| !! | CAATTGCCAGAGGGCATTCA+TGG | + | Chr4:23120114-23120133 | MsG0480019601.01.T01:CDS | 50.0% |
| !! | CGGGAATTGACAGTGCTGAT+GGG | + | Chr4:23121405-23121424 | MsG0480019601.01.T01:CDS | 50.0% |
| !! | CGTGTTGGAGAAGTTGGTGA+TGG | + | Chr4:23118764-23118783 | MsG0480019601.01.T01:CDS | 50.0% |
| !! | GGTGATGGGTGGTCTTCTTT+AGG | - | Chr4:23121032-23121051 | None:intergenic | 50.0% |
| !! | GTTGGAGAAGTTGGTGATGG+AGG | + | Chr4:23118767-23118786 | MsG0480019601.01.T01:CDS | 50.0% |
| !! | TTCCTTCTGGGGTCAACCAA+TGG | + | Chr4:23121212-23121231 | MsG0480019601.01.T01:CDS | 50.0% |
| AGCACAATTAACTCGGGCGG+TGG | - | Chr4:23121053-23121072 | None:intergenic | 55.0% | |
| AGCGGCGGCAGAAATATCTC+CGG | - | Chr4:23118633-23118652 | None:intergenic | 55.0% | |
| ATTAACTCGGGCGGTGGTGA+TGG | - | Chr4:23121047-23121066 | None:intergenic | 55.0% | |
| CGGTAAACACCGTTCCGGAA+CGG | - | Chr4:23118668-23118687 | None:intergenic | 55.0% | |
| CGTTCCGGAACGGTGTTTAC+CGG | + | Chr4:23118666-23118685 | MsG0480019601.01.T01:CDS | 55.0% | |
| CTCTTAAAGGGGCAGTGGGT+AGG | + | Chr4:23120537-23120556 | MsG0480019601.01.T01:CDS | 55.0% | |
| GGCAGCACAATTAACTCGGG+CGG | - | Chr4:23121056-23121075 | None:intergenic | 55.0% | |
| GGTATGCAGCCATACACCAC+AGG | - | Chr4:23121378-23121397 | None:intergenic | 55.0% | |
| GGTTATGAGGTCCTCGATCC+TGG | - | Chr4:23120250-23120269 | None:intergenic | 55.0% | |
| TGGCTGCATACCAGATGTGC+GGG | + | Chr4:23121386-23121405 | MsG0480019601.01.T01:CDS | 55.0% | |
| TTAACTCGGGCGGTGGTGAT+GGG | - | Chr4:23121046-23121065 | None:intergenic | 55.0% | |
| ! | GCGGGAATTGACAGTGCTGA+TGG | + | Chr4:23121404-23121423 | MsG0480019601.01.T01:CDS | 55.0% |
| !! | GCCAGAGGGCATTCATGGTA+TGG | + | Chr4:23120119-23120138 | MsG0480019601.01.T01:CDS | 55.0% |
| AACACCGTTCCGGAACGGCA+CGG | - | Chr4:23118663-23118682 | None:intergenic | 60.0% | |
| AAGAGCTGAAGGCAGCTCCG+TGG | - | Chr4:23120976-23120995 | None:intergenic | 60.0% | |
| GCACGATTCCGAATGGAGCG+AGG | + | Chr4:23121278-23121297 | MsG0480019601.01.T01:CDS | 60.0% | |
| GGCGGCAGAAATATCTCCGG+TGG | - | Chr4:23118630-23118649 | None:intergenic | 60.0% | |
| GGGGCAGTGGGTAGGCGTAT+TGG | + | Chr4:23120545-23120564 | MsG0480019601.01.T01:CDS | 65.0% | |
| GGTGGCTCGTCGCTTCTCTC+TGG | + | Chr4:23119893-23119912 | MsG0480019601.01.T01:CDS | 65.0% | |
| ACCGTTCCGGAACGGCACGG+CGG | - | Chr4:23118660-23118679 | None:intergenic | 70.0% | |
| GAACGGCACGGCGGCAGAAG+CGG | - | Chr4:23118651-23118670 | None:intergenic | 70.0% | |
| ! | CTTCTGCCGCCGTGCCGTTC+CGG | + | Chr4:23118651-23118670 | MsG0480019601.01.T01:CDS | 70.0% |
| !! | ACTCGGGCGGTGGTGATGGG+TGG | - | Chr4:23121043-23121062 | None:intergenic | 70.0% |
| ! | GCCGCCGTGCCGTTCCGGAA+CGG | + | Chr4:23118656-23118675 | MsG0480019601.01.T01:CDS | 75.0% |
| ! | CGGCACGGCGGCAGAAGCGG+CGG | - | Chr4:23118648-23118667 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 23118548 | 23121586 | 23118548 | ID=MsG0480019601.01;Name=MsG0480019601.01 |
| Chr4 | mRNA | 23118548 | 23121586 | 23118548 | ID=MsG0480019601.01.T01;Parent=MsG0480019601.01;Name=MsG0480019601.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|1|1|5|0|710 |
| Chr4 | exon | 23118548 | 23118881 | 23118548 | ID=MsG0480019601.01.T01:exon:5088;Parent=MsG0480019601.01.T01 |
| Chr4 | exon | 23119527 | 23119653 | 23119527 | ID=MsG0480019601.01.T01:exon:5089;Parent=MsG0480019601.01.T01 |
| Chr4 | exon | 23119748 | 23119966 | 23119748 | ID=MsG0480019601.01.T01:exon:5090;Parent=MsG0480019601.01.T01 |
| Chr4 | exon | 23120055 | 23120678 | 23120055 | ID=MsG0480019601.01.T01:exon:5091;Parent=MsG0480019601.01.T01 |
| Chr4 | exon | 23120758 | 23121586 | 23120758 | ID=MsG0480019601.01.T01:exon:5092;Parent=MsG0480019601.01.T01 |
| Chr4 | CDS | 23118548 | 23118881 | 23118548 | ID=MsG0480019601.01.T01:cds;Parent=MsG0480019601.01.T01 |
| Chr4 | CDS | 23119527 | 23119653 | 23119527 | ID=MsG0480019601.01.T01:cds;Parent=MsG0480019601.01.T01 |
| Chr4 | CDS | 23119748 | 23119966 | 23119748 | ID=MsG0480019601.01.T01:cds;Parent=MsG0480019601.01.T01 |
| Chr4 | CDS | 23120055 | 23120678 | 23120055 | ID=MsG0480019601.01.T01:cds;Parent=MsG0480019601.01.T01 |
| Chr4 | CDS | 23120758 | 23121586 | 23120758 | ID=MsG0480019601.01.T01:cds;Parent=MsG0480019601.01.T01 |
| Gene Sequence |
| Protein sequence |
