AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046780.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046780.01.T01 MTR_4g114610 98.020 101 2 0 21 121 1 101 1.09e-69 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046780.01.T01 AT5G20180 54.369 103 43 2 21 121 1 101 5.48e-33 111
MsG0880046780.01.T01 AT5G20180 54.369 103 43 2 21 121 1 101 5.48e-33 111
MsG0880046780.01.T01 AT5G20180 54.369 103 43 2 21 121 1 101 5.48e-33 111
MsG0880046780.01.T01 AT5G20180 54.369 103 43 2 21 121 1 101 5.48e-33 111

Find 56 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCGTCCTTTACGCTTAA+TGG 0.156568 8:-78000691 None:intergenic
TTAGTCAATCATACTGGATT+TGG 0.230583 8:+78005258 MsG0880046780.01.T01:three_prime_UTR
GCACGAGTTATAAGGTTTAA+TGG 0.231660 8:-78005475 None:intergenic
TTTAAAGGAGTTGGTATTAC+AGG 0.252585 8:-78005734 None:intergenic
CCTTGTCTTTGTTTATGCTT+AGG 0.255309 8:-78000735 None:intergenic
CATCATTAGCACGAGTTATA+AGG 0.262358 8:-78005483 None:intergenic
CTTAACATGAGTTGCGTCTT+TGG 0.277027 8:+78005766 MsG0880046780.01.T01:three_prime_UTR
CCAGACCTGTTCGTGAAGTA+TGG 0.321946 8:-78005116 None:intergenic
CTTGTCTTTGTTTATGCTTA+GGG 0.336773 8:-78000734 None:intergenic
TTGTATGATATGGATAGATA+TGG 0.349995 8:+78005615 MsG0880046780.01.T01:three_prime_UTR
GTGATCTGATTTGTATGATA+TGG 0.352922 8:+78005605 MsG0880046780.01.T01:three_prime_UTR
ATAGACAAGCTGTGCCTTTG+AGG 0.358151 8:-78005150 None:intergenic
CGCAAAACAAAACAAGTATA+AGG 0.369128 8:-78005326 None:intergenic
CAAAGACGCAACTCATGTTA+AGG 0.371977 8:-78005765 None:intergenic
TAGTCAATCATACTGGATTT+GGG 0.373277 8:+78005259 MsG0880046780.01.T01:three_prime_UTR
AGAAAATGTGTGAGTATTGT+AGG 0.402217 8:+78000667 MsG0880046780.01.T01:CDS
CATTATGTTTCAATGTTCAC+TGG 0.407599 8:+78005420 MsG0880046780.01.T01:three_prime_UTR
CAGGTCACACAATTCATGTT+AGG 0.416105 8:-78005687 None:intergenic
ATCAGTGGGGCACAATTAAT+AGG 0.418856 8:+78005443 MsG0880046780.01.T01:three_prime_UTR
ATACAGAAACAGAGACTTGT+TGG 0.425678 8:+78005654 MsG0880046780.01.T01:three_prime_UTR
GTTATAAGGTTTAATGGAGG+TGG 0.445802 8:-78005469 None:intergenic
TTCAATGTTCACTGGATCAG+TGG 0.457318 8:+78005428 MsG0880046780.01.T01:three_prime_UTR
CCATACTTCACGAACAGGTC+TGG 0.465981 8:+78005116 MsG0880046780.01.T01:CDS
GTATGGATGGAGAGTTGGCC+TGG 0.467176 8:+78005176 MsG0880046780.01.T01:CDS
CCAATCCATACTTCACGAAC+AGG 0.468835 8:+78005111 MsG0880046780.01.T01:CDS
ATATTGTTAGTCAATCATAC+TGG 0.472168 8:+78005252 MsG0880046780.01.T01:three_prime_UTR
TATTTGATATGCCTCACTCT+TGG 0.474560 8:+78005352 MsG0880046780.01.T01:three_prime_UTR
AAAGACGCAACTCATGTTAA+GGG 0.476441 8:-78005764 None:intergenic
CTCTATTCTGTCTAAGAAGT+AGG 0.476774 8:+78005200 MsG0880046780.01.T01:CDS
CACAGCTTGTCTATGTTGTA+TGG 0.485820 8:+78005159 MsG0880046780.01.T01:CDS
AAGTTCAAGTTGTGCTGCGC+AGG 0.490220 8:+78005080 MsG0880046780.01.T01:CDS
TCAATGTTCACTGGATCAGT+GGG 0.509943 8:+78005429 MsG0880046780.01.T01:three_prime_UTR
CTACTTCTTAGACAGAATAG+AGG 0.512181 8:-78005199 None:intergenic
CCTGTTCGTGAAGTATGGAT+TGG 0.529692 8:-78005111 None:intergenic
AAAACATACGGCTGATGCGA+CGG 0.531919 8:-78000783 None:intergenic
TTAAAATCAATTCAGGTCTG+TGG 0.531970 8:+78005053 MsG0880046780.01.T01:intron
AGAGTGAGGCATATCAAATA+CGG 0.542257 8:-78005349 None:intergenic
GAATTGTGTGACCTGGAGAA+TGG 0.546995 8:+78005695 MsG0880046780.01.T01:three_prime_UTR
TCTTAGACAGAATAGAGGCC+AGG 0.554562 8:-78005194 None:intergenic
TGTATGATATGGATAGATAT+GGG 0.555279 8:+78005616 MsG0880046780.01.T01:three_prime_UTR
CTAACATGAATTGTGTGACC+TGG 0.560313 8:+78005688 MsG0880046780.01.T01:three_prime_UTR
TCTATTCTGTCTAAGAAGTA+GGG 0.562971 8:+78005201 MsG0880046780.01.T01:CDS
ATGTTGTATGGATGGAGAGT+TGG 0.567494 8:+78005171 MsG0880046780.01.T01:CDS
TACTTGTTCAGAAATCATGA+AGG 0.577487 8:+78000629 MsG0880046780.01.T01:CDS
TGTAGGACCATTAAGCGTAA+AGG 0.578485 8:+78000684 MsG0880046780.01.T01:CDS
GCTTGTCTATGTTGTATGGA+TGG 0.580109 8:+78005163 MsG0880046780.01.T01:CDS
TTATAAGGTTTAATGGAGGT+GGG 0.583369 8:-78005468 None:intergenic
CAACGAAGAGAGAGAGCTAG+AGG 0.626984 8:-78005282 None:intergenic
AGAAACAGAGACTTGTTGGT+AGG 0.631112 8:+78005658 MsG0880046780.01.T01:three_prime_UTR
TGGCTTCTATAATTCCTCAA+AGG 0.633307 8:+78005136 MsG0880046780.01.T01:CDS
CCTAAGCATAAACAAAGACA+AGG 0.649194 8:+78000735 MsG0880046780.01.T01:CDS
TCGTCAATATGGTCAACAGA+AGG 0.649586 8:+78005386 MsG0880046780.01.T01:three_prime_UTR
AGAAACAAAAGCCAAGAGTG+AGG 0.659070 8:-78005363 None:intergenic
CGAGTTATAAGGTTTAATGG+AGG 0.664147 8:-78005472 None:intergenic
GCATCACTCTCAGTCACGTG+TGG 0.683240 8:+78005562 MsG0880046780.01.T01:three_prime_UTR
CAATGTTCACTGGATCAGTG+GGG 0.729205 8:+78005430 MsG0880046780.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTTTTAAAATTTTGTTA+TGG - Chr8:78001641-78001660 None:intergenic 10.0%
!!! AAGTTTTAAAATTTTGTTAT+GGG - Chr8:78001640-78001659 None:intergenic 10.0%
!!! CATATTTTTATGTTATTTTA+TGG - Chr8:78002054-78002073 None:intergenic 10.0%
!!! TAAATTTTTAAAATCAATTC+AGG + Chr8:78005046-78005065 MsG0880046780.01.T01:intron 10.0%
!!! TATTATTTGATAACTTATTA+AGG - Chr8:78002386-78002405 None:intergenic 10.0%
!! AATAAAAGAAAGAAAACATA+CGG - Chr8:78000798-78000817 None:intergenic 15.0%
!! AGTAAAATTAGGATATAAAA+AGG + Chr8:78004440-78004459 MsG0880046780.01.T01:intron 15.0%
!! CATATAAAATTAGAATTTCA+AGG + Chr8:78001801-78001820 MsG0880046780.01.T01:intron 15.0%
!! TAATAATTACTCATAACTTT+AGG - Chr8:78003374-78003393 None:intergenic 15.0%
!!! ATTTTTATGTTATTTTATGG+TGG - Chr8:78002051-78002070 None:intergenic 15.0%
!!! CTACATATTAAGATTATTTT+GGG - Chr8:78002785-78002804 None:intergenic 15.0%
!!! GTTCTTATGTTTTTTATTAT+AGG - Chr8:78004044-78004063 None:intergenic 15.0%
!!! GTTTATATACATTTTATCAT+GGG + Chr8:78002073-78002092 MsG0880046780.01.T01:intron 15.0%
!!! TACATATTAAGATTATTTTG+GGG - Chr8:78002784-78002803 None:intergenic 15.0%
!!! TATTTTGTAAAATATACACT+TGG - Chr8:78004273-78004292 None:intergenic 15.0%
!!! TGTTTATATACATTTTATCA+TGG + Chr8:78002072-78002091 MsG0880046780.01.T01:intron 15.0%
!!! TTTATATACATTTTATCATG+GGG + Chr8:78002074-78002093 MsG0880046780.01.T01:intron 15.0%
!! AAAATGAGTTAGATAAGAAA+GGG - Chr8:78004014-78004033 None:intergenic 20.0%
!! ACAGTAAATTAGAATTCATT+AGG + Chr8:78004492-78004511 MsG0880046780.01.T01:intron 20.0%
!! CAGTAAATTAGAATTCATTA+GGG + Chr8:78004493-78004512 MsG0880046780.01.T01:intron 20.0%
!! CCAAAATAATCTTAATATGT+AGG + Chr8:78002783-78002802 MsG0880046780.01.T01:intron 20.0%
!! GAAAACAAAATGAAAGAAAA+AGG + Chr8:78001823-78001842 MsG0880046780.01.T01:intron 20.0%
!! GATAAGAATCTTAAATATCA+AGG - Chr8:78003700-78003719 None:intergenic 20.0%
!! TAGGATATAAAAAGGAATAA+GGG + Chr8:78004448-78004467 MsG0880046780.01.T01:intron 20.0%
!! TTAGGATATAAAAAGGAATA+AGG + Chr8:78004447-78004466 MsG0880046780.01.T01:intron 20.0%
!!! AAATTTTGTGAAATTGTTCT+TGG - Chr8:78003404-78003423 None:intergenic 20.0%
!!! AAGATTTTTATTGAGTTCAT+TGG + Chr8:78003576-78003595 MsG0880046780.01.T01:intron 20.0%
!!! AATTTTGTGAAATTGTTCTT+GGG - Chr8:78003403-78003422 None:intergenic 20.0%
!!! ACATATTAAGATTATTTTGG+GGG - Chr8:78002783-78002802 None:intergenic 20.0%
!!! CAACAATTATTTTAGTGAAT+AGG + Chr8:78003175-78003194 MsG0880046780.01.T01:intron 20.0%
!!! CCTACATATTAAGATTATTT+TGG - Chr8:78002786-78002805 None:intergenic 20.0%
!!! CTTATATTGAGATTTTCATA+GGG + Chr8:78003750-78003769 MsG0880046780.01.T01:intron 20.0%
!!! CTTCTTTATAACATTTTCTT+GGG + Chr8:78004716-78004735 MsG0880046780.01.T01:intron 20.0%
!!! GAGAAACTACTATTTTTTAT+AGG + Chr8:78002956-78002975 MsG0880046780.01.T01:intron 20.0%
!!! TGTATACTTTTTTCATCTAA+CGG - Chr8:78001310-78001329 None:intergenic 20.0%
!!! TTGAACTGGTTTTTAAATAT+CGG + Chr8:78001228-78001247 MsG0880046780.01.T01:intron 20.0%
! AAAGTCAAAAACATACACAT+AGG + Chr8:78004120-78004139 MsG0880046780.01.T01:intron 25.0%
! AAATGAGTTAGATAAGAAAG+GGG - Chr8:78004013-78004032 None:intergenic 25.0%
! AACATAATTCATTGTATCCA+TGG + Chr8:78001558-78001577 MsG0880046780.01.T01:intron 25.0%
! AACTATACGAAGAAAAGAAA+CGG + Chr8:78004148-78004167 MsG0880046780.01.T01:intron 25.0%
! AGTTATGAGTAATTATTACG+AGG + Chr8:78003376-78003395 MsG0880046780.01.T01:intron 25.0%
! ATATTGTTAGTCAATCATAC+TGG + Chr8:78005252-78005271 MsG0880046780.01.T01:three_prime_UTR 25.0%
! ATGGATACAATGAATTATGT+TGG - Chr8:78001559-78001578 None:intergenic 25.0%
! ATTAGTGTAGAAGTTATCAT+GGG + Chr8:78002103-78002122 MsG0880046780.01.T01:intron 25.0%
! CCAAGAAAATGTTATAAAGA+AGG - Chr8:78004718-78004737 None:intergenic 25.0%
! GAAAATGAGTTAGATAAGAA+AGG - Chr8:78004015-78004034 None:intergenic 25.0%
! GCAATAACTTAAACATCATT+TGG + Chr8:78002265-78002284 MsG0880046780.01.T01:intron 25.0%
! TAATCTTAATATGTAGGAGT+AGG + Chr8:78002789-78002808 MsG0880046780.01.T01:intron 25.0%
! TATTAGTGTAGAAGTTATCA+TGG + Chr8:78002102-78002121 MsG0880046780.01.T01:intron 25.0%
! TGAAAACACTTAAAAGAAAC+TGG - Chr8:78003516-78003535 None:intergenic 25.0%
! TGAAAAGAAAAAATACACTG+AGG + Chr8:78004077-78004096 MsG0880046780.01.T01:intron 25.0%
! TGTATGATATGGATAGATAT+GGG + Chr8:78005616-78005635 MsG0880046780.01.T01:three_prime_UTR 25.0%
! TGTTATTCATCCAACTAATT+GGG + Chr8:78004333-78004352 MsG0880046780.01.T01:intron 25.0%
! TTCTTTAGATGAGAGATATA+GGG - Chr8:78002456-78002475 None:intergenic 25.0%
! TTGTATGATATGGATAGATA+TGG + Chr8:78005615-78005634 MsG0880046780.01.T01:three_prime_UTR 25.0%
! TTTCTTTAGATGAGAGATAT+AGG - Chr8:78002457-78002476 None:intergenic 25.0%
!! AAAAATGTTGATTGAAGACT+TGG - Chr8:78001746-78001765 None:intergenic 25.0%
!! ACTTTAGGTTCTACTTTATA+CGG - Chr8:78003359-78003378 None:intergenic 25.0%
!! CCTTCTTTATAACATTTTCT+TGG + Chr8:78004715-78004734 MsG0880046780.01.T01:intron 25.0%
!! GCTTATATTGAGATTTTCAT+AGG + Chr8:78003749-78003768 MsG0880046780.01.T01:intron 25.0%
!! GCTTATTATTTAAAGCTTTG+AGG + Chr8:78003603-78003622 MsG0880046780.01.T01:intron 25.0%
!! GTACTTAGGAGATTTTTAAA+AGG + Chr8:78003215-78003234 MsG0880046780.01.T01:intron 25.0%
!! TGTTTCCGACATTTTTAATA+GGG - Chr8:78001493-78001512 None:intergenic 25.0%
!! TTGATTGAATTTGAAGTGTT+TGG + Chr8:78001194-78001213 MsG0880046780.01.T01:intron 25.0%
!! TTGTTATTCATCCAACTAAT+TGG + Chr8:78004332-78004351 MsG0880046780.01.T01:intron 25.0%
!! TTGTTTCCGACATTTTTAAT+AGG - Chr8:78001494-78001513 None:intergenic 25.0%
!! TTTGTAACCTTAATTTGACA+GGG + Chr8:78004227-78004246 MsG0880046780.01.T01:intron 25.0%
!! TTTTTGTTGACAAAATGGTA+GGG + Chr8:78004612-78004631 MsG0880046780.01.T01:intron 25.0%
!!! AAGCAATTTTTTTCCCTTTT+GGG + Chr8:78003007-78003026 MsG0880046780.01.T01:intron 25.0%
!!! ACTGTTTTTTGTTGACAAAA+TGG + Chr8:78004607-78004626 MsG0880046780.01.T01:intron 25.0%
!!! AGTTTTTAAGAAAACAAACG+TGG - Chr8:78002926-78002945 None:intergenic 25.0%
!!! CATATTAAGATTATTTTGGG+GGG - Chr8:78002782-78002801 None:intergenic 25.0%
!!! GAAAATCAGCAGATTTTTTT+GGG - Chr8:78003728-78003747 None:intergenic 25.0%
!!! GTTACACTTTTTTCATCTAA+CGG + Chr8:78001972-78001991 MsG0880046780.01.T01:intron 25.0%
!!! TAAGCAATTTTTTTCCCTTT+TGG + Chr8:78003006-78003025 MsG0880046780.01.T01:intron 25.0%
!!! TGAAAATCAGCAGATTTTTT+TGG - Chr8:78003729-78003748 None:intergenic 25.0%
!!! TGTATGTTTTTGACTTTCAA+AGG - Chr8:78004117-78004136 None:intergenic 25.0%
!!! TTATTTTATGGTGGATTCTA+GGG - Chr8:78002042-78002061 None:intergenic 25.0%
!!! TTTTGTAACCTTAATTTGAC+AGG + Chr8:78004226-78004245 MsG0880046780.01.T01:intron 25.0%
!!! TTTTTTGTTGACAAAATGGT+AGG + Chr8:78004611-78004630 MsG0880046780.01.T01:intron 25.0%
AAAATGTATGATGTCGGAAT+GGG + Chr8:78003874-78003893 MsG0880046780.01.T01:intron 30.0%
AACCATAATAAAGGTTAGCA+GGG + Chr8:78001512-78001531 MsG0880046780.01.T01:intron 30.0%
AAGATTATTCAATTACCACC+AGG - Chr8:78001144-78001163 None:intergenic 30.0%
AATTCTAATTTACTGTCACG+AGG - Chr8:78004488-78004507 None:intergenic 30.0%
ACGAAAGTAATGTTAGCTAT+GGG + Chr8:78002694-78002713 MsG0880046780.01.T01:intron 30.0%
AGATTATTCAATTACCACCA+GGG - Chr8:78001143-78001162 None:intergenic 30.0%
AGTCATATACCCAAATTACT+TGG + Chr8:78003280-78003299 MsG0880046780.01.T01:intron 30.0%
ATCTAAAGAAAAGAAGGATG+TGG + Chr8:78002466-78002485 MsG0880046780.01.T01:intron 30.0%
ATTACTTGGCCTAAGTTAAA+CGG + Chr8:78003294-78003313 MsG0880046780.01.T01:intron 30.0%
CACCTTGTTAGAATTCATTA+GGG + Chr8:78004394-78004413 MsG0880046780.01.T01:intron 30.0%
CATTATGTTTCAATGTTCAC+TGG + Chr8:78005420-78005439 MsG0880046780.01.T01:three_prime_UTR 30.0%
CGCAAAACAAAACAAGTATA+AGG - Chr8:78005329-78005348 None:intergenic 30.0%
GAATAAAAGAGAGAACAAAG+AGG + Chr8:78004462-78004481 MsG0880046780.01.T01:intron 30.0%
GATACAATGAATTATGTTGG+TGG - Chr8:78001556-78001575 None:intergenic 30.0%
GGATTCATGTATATCATCAA+GGG - Chr8:78003043-78003062 None:intergenic 30.0%
TAAAATGTATGATGTCGGAA+TGG + Chr8:78003873-78003892 MsG0880046780.01.T01:intron 30.0%
TAACTTAGGCCAAGTAATTT+GGG - Chr8:78003292-78003311 None:intergenic 30.0%
TACTTGTTCAGAAATCATGA+AGG + Chr8:78000629-78000648 MsG0880046780.01.T01:CDS 30.0%
TAGTCAATCATACTGGATTT+GGG + Chr8:78005259-78005278 MsG0880046780.01.T01:three_prime_UTR 30.0%
TATTATCCATTCGTGAGAAA+AGG - Chr8:78004694-78004713 None:intergenic 30.0%
TCACCTTGTTAGAATTCATT+AGG + Chr8:78004393-78004412 MsG0880046780.01.T01:intron 30.0%
TCATGTCCAACAAGTATAAT+GGG + Chr8:78004359-78004378 MsG0880046780.01.T01:intron 30.0%
TCTATTCTGTCTAAGAAGTA+GGG + Chr8:78005201-78005220 MsG0880046780.01.T01:CDS 30.0%
TCTCTCATCTAAAGAAAAGA+AGG + Chr8:78002460-78002479 MsG0880046780.01.T01:intron 30.0%
TTAAAATCAATTCAGGTCTG+TGG + Chr8:78005053-78005072 MsG0880046780.01.T01:intron 30.0%
TTAACTTAGGCCAAGTAATT+TGG - Chr8:78003293-78003312 None:intergenic 30.0%
TTAGTCAATCATACTGGATT+TGG + Chr8:78005258-78005277 MsG0880046780.01.T01:three_prime_UTR 30.0%
TTATAAGGTTTAATGGAGGT+GGG - Chr8:78005471-78005490 None:intergenic 30.0%
TTCGGTAAAATGTATGATGT+CGG + Chr8:78003868-78003887 MsG0880046780.01.T01:intron 30.0%
TTGATTAAAAGCTTCGACTT+TGG + Chr8:78004806-78004825 MsG0880046780.01.T01:intron 30.0%
! AGAAAATGTGTGAGTATTGT+AGG + Chr8:78000667-78000686 MsG0880046780.01.T01:CDS 30.0%
! ATTGTATATTTTATTGCCCC+CGG - Chr8:78002746-78002765 None:intergenic 30.0%
! CTTGTCTTTGTTTATGCTTA+GGG - Chr8:78000737-78000756 None:intergenic 30.0%
! GAAGCAATTGTGTTTTATCA+CGG + Chr8:78003910-78003929 MsG0880046780.01.T01:intron 30.0%
! GCTTCATATTTAGAACCTAT+CGG - Chr8:78000886-78000905 None:intergenic 30.0%
! GTGATCTGATTTGTATGATA+TGG + Chr8:78005605-78005624 MsG0880046780.01.T01:three_prime_UTR 30.0%
! GTTAAGGGTCATGATTTTAA+AGG - Chr8:78005752-78005771 None:intergenic 30.0%
! GTTTCCGACATTTTTAATAG+GGG - Chr8:78001492-78001511 None:intergenic 30.0%
! TCTTTTATTCAACTGTCACT+AGG + Chr8:78003817-78003836 MsG0880046780.01.T01:intron 30.0%
! TTAAATATCGGTGGATTCTA+GGG + Chr8:78001240-78001259 MsG0880046780.01.T01:intron 30.0%
! TTTAAATATCGGTGGATTCT+AGG + Chr8:78001239-78001258 MsG0880046780.01.T01:intron 30.0%
! TTTTGTGATTTGAGAGAAGA+TGG + Chr8:78001853-78001872 MsG0880046780.01.T01:intron 30.0%
! TTTTTAATAGGGGAGGAATA+CGG - Chr8:78001482-78001501 None:intergenic 30.0%
!! CTGTTGTTGTTTAAGTACTT+AGG + Chr8:78003201-78003220 MsG0880046780.01.T01:intron 30.0%
!! CTTTTAAGTGTTTTCAAGCA+TGG + Chr8:78003520-78003539 MsG0880046780.01.T01:intron 30.0%
!! CTTTTGTTTCTTCGTCAATA+TGG + Chr8:78005375-78005394 MsG0880046780.01.T01:three_prime_UTR 30.0%
!! TACCCAAGAAATAACTTGTT+GGG + Chr8:78003250-78003269 MsG0880046780.01.T01:intron 30.0%
!! TTATTGTTTTATGCTGCTTG+TGG + Chr8:78000813-78000832 MsG0880046780.01.T01:intron 30.0%
!! TTTAAAGGAGTTGGTATTAC+AGG - Chr8:78005737-78005756 None:intergenic 30.0%
!!! AACTGGTTTTTAAATATCGG+TGG + Chr8:78001231-78001250 MsG0880046780.01.T01:intron 30.0%
!!! AGCAATTTTTTTCCCTTTTG+GGG + Chr8:78003008-78003027 MsG0880046780.01.T01:intron 30.0%
!!! GTTATTTTATGGTGGATTCT+AGG - Chr8:78002043-78002062 None:intergenic 30.0%
AAAAGAAGAAGCCTACAAGA+CGG + Chr8:78001676-78001695 MsG0880046780.01.T01:intron 35.0%
AAAGACGCAACTCATGTTAA+GGG - Chr8:78005767-78005786 None:intergenic 35.0%
AAATTGGCAGCATGGTATTA+TGG + Chr8:78002359-78002378 MsG0880046780.01.T01:intron 35.0%
AATTGGCAGCATGGTATTAT+GGG + Chr8:78002360-78002379 MsG0880046780.01.T01:intron 35.0%
ACACTCCATGCATTTCAATT+AGG - Chr8:78002244-78002263 None:intergenic 35.0%
AGAAAAAATACACTGAGGAG+AGG + Chr8:78004082-78004101 MsG0880046780.01.T01:intron 35.0%
AGAGTGAGGCATATCAAATA+CGG - Chr8:78005352-78005371 None:intergenic 35.0%
AGAGTGAGTGGTATTGTAAA+GGG - Chr8:78001379-78001398 None:intergenic 35.0%
AGCAGCAAGGTAGTAAAATT+AGG + Chr8:78004429-78004448 MsG0880046780.01.T01:intron 35.0%
AGGAATACAAAGAGTCACTT+TGG + Chr8:78004200-78004219 MsG0880046780.01.T01:intron 35.0%
ATACAAGTAGGAAGAAGTAG+TGG + Chr8:78003109-78003128 MsG0880046780.01.T01:intron 35.0%
ATACAGAAACAGAGACTTGT+TGG + Chr8:78005654-78005673 MsG0880046780.01.T01:three_prime_UTR 35.0%
ATGATGAGAAGTTAATGCAG+GGG + Chr8:78002628-78002647 MsG0880046780.01.T01:intron 35.0%
ATTAAAAGAGAAGGTAGGAC+TGG - Chr8:78003956-78003975 None:intergenic 35.0%
ATTAGACTACAGACAGGTAA+GGG + Chr8:78002312-78002331 MsG0880046780.01.T01:intron 35.0%
CAACCATAATAAAGGTTAGC+AGG + Chr8:78001511-78001530 MsG0880046780.01.T01:intron 35.0%
CAAGACCTAATTGAAATGCA+TGG + Chr8:78002236-78002255 MsG0880046780.01.T01:intron 35.0%
CACCCTAATGAATTCTAACA+AGG - Chr8:78004399-78004418 None:intergenic 35.0%
CATCATTAGCACGAGTTATA+AGG - Chr8:78005486-78005505 None:intergenic 35.0%
CATCTAACGGCCAATTTAAA+TGG + Chr8:78001985-78002004 MsG0880046780.01.T01:intron 35.0%
CCTAAGCATAAACAAAGACA+AGG + Chr8:78000735-78000754 MsG0880046780.01.T01:CDS 35.0%
CCTAGATATGTGCTTAGATA+GGG - Chr8:78002192-78002211 None:intergenic 35.0%
CCTATCTAAGCACATATCTA+GGG + Chr8:78002190-78002209 MsG0880046780.01.T01:intron 35.0%
CGAGTTATAAGGTTTAATGG+AGG - Chr8:78005475-78005494 None:intergenic 35.0%
CGGATTCATGTATATCATCA+AGG - Chr8:78003044-78003063 None:intergenic 35.0%
CTACTTCTTAGACAGAATAG+AGG - Chr8:78005202-78005221 None:intergenic 35.0%
CTCATGTCCAACAAGTATAA+TGG + Chr8:78004358-78004377 MsG0880046780.01.T01:intron 35.0%
CTCTATTCTGTCTAAGAAGT+AGG + Chr8:78005200-78005219 MsG0880046780.01.T01:CDS 35.0%
GAATAAGGGAGAAAACAAAG+AGG + Chr8:78004561-78004580 MsG0880046780.01.T01:intron 35.0%
GACGAAAGTAATGTTAGCTA+TGG + Chr8:78002693-78002712 MsG0880046780.01.T01:intron 35.0%
GACTATACAGCTTAAACTTG+AGG - Chr8:78003447-78003466 None:intergenic 35.0%
GATGATGAGAAGTTAATGCA+GGG + Chr8:78002627-78002646 MsG0880046780.01.T01:intron 35.0%
GCACGAGTTATAAGGTTTAA+TGG - Chr8:78005478-78005497 None:intergenic 35.0%
GCATGATTAAAAGAGAAGGT+AGG - Chr8:78003961-78003980 None:intergenic 35.0%
GTAGAAGAAGAGATAGTAGA+AGG + Chr8:78004180-78004199 MsG0880046780.01.T01:intron 35.0%
GTCGGAAACAACCATAATAA+AGG + Chr8:78001503-78001522 MsG0880046780.01.T01:intron 35.0%
GTTATAAGGTTTAATGGAGG+TGG - Chr8:78005472-78005491 None:intergenic 35.0%
TACAAGTAGGAAGAAGTAGT+GGG + Chr8:78003110-78003129 MsG0880046780.01.T01:intron 35.0%
TACACATGGCAAATGGAATT+TGG - Chr8:78001048-78001067 None:intergenic 35.0%
TAGGTTCTACTTTATACGGT+TGG - Chr8:78003355-78003374 None:intergenic 35.0%
TAGTTTAGATTCAAGCCGAT+AGG + Chr8:78000868-78000887 MsG0880046780.01.T01:intron 35.0%
TATTTGATATGCCTCACTCT+TGG + Chr8:78005352-78005371 MsG0880046780.01.T01:three_prime_UTR 35.0%
TCAAAGACTCTATAAGCTAG+TGG + Chr8:78004850-78004869 MsG0880046780.01.T01:intron 35.0%
TCCTCCCCTATTAAAAATGT+CGG + Chr8:78001485-78001504 MsG0880046780.01.T01:intron 35.0%
TCTTTAGTCACAAATCACAC+TGG - Chr8:78001941-78001960 None:intergenic 35.0%
TGAATCATTAGACTACAGAC+AGG + Chr8:78002306-78002325 MsG0880046780.01.T01:intron 35.0%
TGGCTTCTATAATTCCTCAA+AGG + Chr8:78005136-78005155 MsG0880046780.01.T01:CDS 35.0%
TGGTGAATTAGTTGTTGAAC+TGG + Chr8:78001214-78001233 MsG0880046780.01.T01:intron 35.0%
! AGAAAAGGCATAATCATGTG+TGG - Chr8:78001352-78001371 None:intergenic 35.0%
! CATAGGGAGTTTAAAGCTTT+AGG + Chr8:78003766-78003785 MsG0880046780.01.T01:intron 35.0%
! CCTTGTCTTTGTTTATGCTT+AGG - Chr8:78000738-78000757 None:intergenic 35.0%
! GAAGGCATGATTAAAAGAGA+AGG - Chr8:78003965-78003984 None:intergenic 35.0%
! GGAATACAAAGAGTCACTTT+GGG + Chr8:78004201-78004220 MsG0880046780.01.T01:intron 35.0%
! GGTCCAGAAATATTTGTTAC+CGG + Chr8:78002724-78002743 MsG0880046780.01.T01:intron 35.0%
! GTACCCAAGAAATAACTTGT+TGG + Chr8:78003249-78003268 MsG0880046780.01.T01:intron 35.0%
! GTCCAGAAATATTTGTTACC+GGG + Chr8:78002725-78002744 MsG0880046780.01.T01:intron 35.0%
! TCAGCTATACCGTTTAACTT+AGG - Chr8:78003306-78003325 None:intergenic 35.0%
! TCCAGAAATATTTGTTACCG+GGG + Chr8:78002726-78002745 MsG0880046780.01.T01:intron 35.0%
!! CACCCAACAAGTTATTTCTT+GGG - Chr8:78003255-78003274 None:intergenic 35.0%
!! GGTCATGATTTTAAAGGAGT+TGG - Chr8:78005746-78005765 None:intergenic 35.0%
!!! GCAATTTTTTTCCCTTTTGG+GGG + Chr8:78003009-78003028 MsG0880046780.01.T01:intron 35.0%
AACTCGTCCTTTACGCTTAA+TGG - Chr8:78000694-78000713 None:intergenic 40.0%
AACTGTTCTTCAGCGAGATA+AGG + Chr8:78004643-78004662 MsG0880046780.01.T01:intron 40.0%
AAGTGTGTACACATGGCAAA+TGG - Chr8:78001055-78001074 None:intergenic 40.0%
AATACCATGCTGCCAATTTG+CGG - Chr8:78002358-78002377 None:intergenic 40.0%
ACATGGCAAATGGAATTTGG+TGG - Chr8:78001045-78001064 None:intergenic 40.0%
AGAAACAAAAGCCAAGAGTG+AGG - Chr8:78005366-78005385 None:intergenic 40.0%
AGAATTCATTAGGGTGTAGC+TGG + Chr8:78004403-78004422 MsG0880046780.01.T01:intron 40.0%
AGCCCTGCTAACCTTTATTA+TGG - Chr8:78001517-78001536 None:intergenic 40.0%
AGTAATGTTAGCTATGGGAG+TGG + Chr8:78002699-78002718 MsG0880046780.01.T01:intron 40.0%
AGTGAGTGGTATTGTAAAGG+GGG - Chr8:78001377-78001396 None:intergenic 40.0%
ATCAGTGGGGCACAATTAAT+AGG + Chr8:78005443-78005462 MsG0880046780.01.T01:three_prime_UTR 40.0%
ATGACATAGTGAGACACAAG+TGG + Chr8:78004305-78004324 MsG0880046780.01.T01:intron 40.0%
ATGTTGTATGGATGGAGAGT+TGG + Chr8:78005171-78005190 MsG0880046780.01.T01:CDS 40.0%
ATTCTAACAAGGTGAGCTCT+AGG - Chr8:78004388-78004407 None:intergenic 40.0%
ATTGTAAAGGGGGAGAGAAA+AGG - Chr8:78001367-78001386 None:intergenic 40.0%
CAAAGACGCAACTCATGTTA+AGG - Chr8:78005768-78005787 None:intergenic 40.0%
CAACACTTCATATCGAAGTC+AGG - Chr8:78000992-78001011 None:intergenic 40.0%
CACACTTGTGTGAATGCTAT+TGG + Chr8:78001068-78001087 MsG0880046780.01.T01:intron 40.0%
CACAGCTTGTCTATGTTGTA+TGG + Chr8:78005159-78005178 MsG0880046780.01.T01:CDS 40.0%
CAGCTAGTTAATACAGTCCA+GGG + Chr8:78003141-78003160 MsG0880046780.01.T01:intron 40.0%
CAGGTCACACAATTCATGTT+AGG - Chr8:78005690-78005709 None:intergenic 40.0%
CATCTAACGGCCAATTTAAG+TGG - Chr8:78001297-78001316 None:intergenic 40.0%
CATTAGACTACAGACAGGTA+AGG + Chr8:78002311-78002330 MsG0880046780.01.T01:intron 40.0%
CCCTAGATATGTGCTTAGAT+AGG - Chr8:78002193-78002212 None:intergenic 40.0%
CCCTATCTAAGCACATATCT+AGG + Chr8:78002189-78002208 MsG0880046780.01.T01:intron 40.0%
CCTCAAACACTAAAACAACC+TGG - Chr8:78003550-78003569 None:intergenic 40.0%
CTAACATGAATTGTGTGACC+TGG + Chr8:78005688-78005707 MsG0880046780.01.T01:three_prime_UTR 40.0%
CTGACTTCGATATGAAGTGT+TGG + Chr8:78000990-78001009 MsG0880046780.01.T01:intron 40.0%
CTTAACATGAGTTGCGTCTT+TGG + Chr8:78005766-78005785 MsG0880046780.01.T01:three_prime_UTR 40.0%
GACATGAGTACCCAATTAGT+TGG - Chr8:78004346-78004365 None:intergenic 40.0%
GACTGGAAAGTGGAAATGAA+TGG - Chr8:78003939-78003958 None:intergenic 40.0%
GAGAGAAATGGAGAGAGAAA+AGG + Chr8:78001909-78001928 MsG0880046780.01.T01:intron 40.0%
GAGAGTGAGTGGTATTGTAA+AGG - Chr8:78001380-78001399 None:intergenic 40.0%
GAGATAAGGAGATTCTCCTT+TGG + Chr8:78004657-78004676 MsG0880046780.01.T01:intron 40.0%
GAGTGAGTGGTATTGTAAAG+GGG - Chr8:78001378-78001397 None:intergenic 40.0%
GATAGTAGATAAACTAGCCC+TGG + Chr8:78001123-78001142 MsG0880046780.01.T01:intron 40.0%
GATATGTGCTTAGATAGGGA+AGG - Chr8:78002188-78002207 None:intergenic 40.0%
GATGTCTCCCTGTCAAATTA+AGG - Chr8:78004237-78004256 None:intergenic 40.0%
GCTTGTCTATGTTGTATGGA+TGG + Chr8:78005163-78005182 MsG0880046780.01.T01:CDS 40.0%
GGATGATGAGAAGTTAATGC+AGG + Chr8:78002626-78002645 MsG0880046780.01.T01:intron 40.0%
TAAGAAAGGGGAGGAACTTA+CGG - Chr8:78004001-78004020 None:intergenic 40.0%
TAAGGAGATTCTCCTTTGGA+AGG + Chr8:78004661-78004680 MsG0880046780.01.T01:intron 40.0%
TCAATGTTCACTGGATCAGT+GGG + Chr8:78005429-78005448 MsG0880046780.01.T01:three_prime_UTR 40.0%
TCAGCTAGTTAATACAGTCC+AGG + Chr8:78003140-78003159 MsG0880046780.01.T01:intron 40.0%
TCGTCAATATGGTCAACAGA+AGG + Chr8:78005386-78005405 MsG0880046780.01.T01:three_prime_UTR 40.0%
TCTTGATGGGGTATACAAGT+AGG + Chr8:78003097-78003116 MsG0880046780.01.T01:intron 40.0%
TGAGTTAGATAAGAAAGGGG+AGG - Chr8:78004010-78004029 None:intergenic 40.0%
TGTAGGACCATTAAGCGTAA+AGG + Chr8:78000684-78000703 MsG0880046780.01.T01:CDS 40.0%
TTACTACCTTGCTGCTATGA+CGG - Chr8:78004425-78004444 None:intergenic 40.0%
TTCAATGTTCACTGGATCAG+TGG + Chr8:78005428-78005447 MsG0880046780.01.T01:three_prime_UTR 40.0%
TTCACACAAGTGTGTACACA+TGG - Chr8:78001062-78001081 None:intergenic 40.0%
TTCTAACAAGGTGAGCTCTA+GGG - Chr8:78004387-78004406 None:intergenic 40.0%
TTGCCAACGTCATAGTTGAT+TGG + Chr8:78004880-78004899 MsG0880046780.01.T01:intron 40.0%
TTGTTGTCAAAGCCGAAATG+GGG - Chr8:78002660-78002679 None:intergenic 40.0%
TTTAATCATGCCTTCAGTCG+TGG + Chr8:78003970-78003989 MsG0880046780.01.T01:intron 40.0%
TTTGAGAGAAGATGGTGAGT+TGG + Chr8:78001861-78001880 MsG0880046780.01.T01:intron 40.0%
! AAGGTGAAGCACTACCATAA+AGG - Chr8:78002169-78002188 None:intergenic 40.0%
! AATTGCTGGCTAGGTTACAT+TGG + Chr8:78002605-78002624 MsG0880046780.01.T01:intron 40.0%
! AGAAGATGGTGAGTTGGAAT+CGG + Chr8:78001867-78001886 MsG0880046780.01.T01:intron 40.0%
! CAGATTTTCTTCCATTCTCC+AGG - Chr8:78005709-78005728 None:intergenic 40.0%
! CCAGAAATATTTGTTACCGG+GGG + Chr8:78002727-78002746 MsG0880046780.01.T01:intron 40.0%
! CGAGTAATGGAAGATAAGAG+TGG + Chr8:78001700-78001719 MsG0880046780.01.T01:intron 40.0%
! CGCACTGAATTCTAGTTATG+TGG + Chr8:78005019-78005038 MsG0880046780.01.T01:intron 40.0%
! CTTGTTGTCAAAGCCGAAAT+GGG - Chr8:78002661-78002680 None:intergenic 40.0%
! GAAACGAGTAGAGCATCATT+TGG - Chr8:78004979-78004998 None:intergenic 40.0%
! GCACATATCTAGGGAAGTTT+TGG + Chr8:78002199-78002218 MsG0880046780.01.T01:intron 40.0%
! GGCGTCAATTTTCTTCTACT+TGG + Chr8:78004901-78004920 MsG0880046780.01.T01:intron 40.0%
! TATTCGCAGACATGGTTTTC+TGG + Chr8:78002559-78002578 MsG0880046780.01.T01:intron 40.0%
! TCCGACATTTTTAATAGGGG+AGG - Chr8:78001489-78001508 None:intergenic 40.0%
!! AGAAACAGAGACTTGTTGGT+AGG + Chr8:78005658-78005677 MsG0880046780.01.T01:three_prime_UTR 40.0%
!! CATATCTAGGGAAGTTTTGG+TGG + Chr8:78002202-78002221 MsG0880046780.01.T01:intron 40.0%
!! CGGTTGGCTTAATTGTTACT+TGG - Chr8:78003339-78003358 None:intergenic 40.0%
!! GATGTGAAGTTTTGTGACCA+TGG - Chr8:78001578-78001597 None:intergenic 40.0%
!! GCACCCAACAAGTTATTTCT+TGG - Chr8:78003256-78003275 None:intergenic 40.0%
!! GGAGTTTAAAGCTTTAGGCA+TGG + Chr8:78003771-78003790 MsG0880046780.01.T01:intron 40.0%
!! GTTTTCAAGCATGGTATACC+AGG + Chr8:78003529-78003548 MsG0880046780.01.T01:intron 40.0%
!! TTTTCTGGTAGACCAGATTC+TGG + Chr8:78002574-78002593 MsG0880046780.01.T01:intron 40.0%
!!! CCAGGTTGTTTTAGTGTTTG+AGG + Chr8:78003547-78003566 MsG0880046780.01.T01:intron 40.0%
!!! GTTTTGTCACTTTCGAACGT+TGG - Chr8:78003494-78003513 None:intergenic 40.0%
!!! TGTTTTAGTGTTTGAGGCAG+AGG + Chr8:78003553-78003572 MsG0880046780.01.T01:intron 40.0%
AAAACATACGGCTGATGCGA+CGG - Chr8:78000786-78000805 None:intergenic 45.0%
AAGGCATAAACCACCTCGAA+TGG - Chr8:78002150-78002169 None:intergenic 45.0%
AATACCACTCACTCTCTCTG+CGG + Chr8:78001384-78001403 MsG0880046780.01.T01:intron 45.0%
AATGTTAGCTATGGGAGTGG+CGG + Chr8:78002702-78002721 MsG0880046780.01.T01:intron 45.0%
AATTCCACTGAGCCAGAATC+TGG - Chr8:78002589-78002608 None:intergenic 45.0%
ACCATGTCTGCGAATAGATC+TGG - Chr8:78002555-78002574 None:intergenic 45.0%
ACGCCAATCAACTATGACGT+TGG - Chr8:78004886-78004905 None:intergenic 45.0%
AGAAGTTATCATGGGCAGCA+TGG + Chr8:78002111-78002130 MsG0880046780.01.T01:intron 45.0%
AGTAGATAAACTAGCCCTGG+TGG + Chr8:78001126-78001145 MsG0880046780.01.T01:intron 45.0%
ATAGACAAGCTGTGCCTTTG+AGG - Chr8:78005153-78005172 None:intergenic 45.0%
ATTTAAATGGTCCACGGGTG+AGG + Chr8:78001998-78002017 MsG0880046780.01.T01:intron 45.0%
ATTTAAGTGGTACACGGGTG+AGG - Chr8:78001284-78001303 None:intergenic 45.0%
CAATGTTCACTGGATCAGTG+GGG + Chr8:78005430-78005449 MsG0880046780.01.T01:three_prime_UTR 45.0%
CACCCGTGGACCATTTAAAT+TGG - Chr8:78001998-78002017 None:intergenic 45.0%
CACCCGTGTACCACTTAAAT+TGG + Chr8:78001284-78001303 MsG0880046780.01.T01:intron 45.0%
CAGTCAACAGTCTAGCTAAC+GGG - Chr8:78002532-78002551 None:intergenic 45.0%
CCAATCCATACTTCACGAAC+AGG + Chr8:78005111-78005130 MsG0880046780.01.T01:CDS 45.0%
CCCCCGGTAACAAATATTTC+TGG - Chr8:78002730-78002749 None:intergenic 45.0%
CCTGTTCGTGAAGTATGGAT+TGG - Chr8:78005114-78005133 None:intergenic 45.0%
CGAGGTGGTTTATGCCTTTA+TGG + Chr8:78002152-78002171 MsG0880046780.01.T01:intron 45.0%
CGGCCAATTTAAATGGTCCA+CGG + Chr8:78001992-78002011 MsG0880046780.01.T01:intron 45.0%
CGGCCAATTTAAGTGGTACA+CGG - Chr8:78001290-78001309 None:intergenic 45.0%
GAATTGTGTGACCTGGAGAA+TGG + Chr8:78005695-78005714 MsG0880046780.01.T01:three_prime_UTR 45.0%
GATATACATGAATCCGCTCC+TGG + Chr8:78003048-78003067 MsG0880046780.01.T01:intron 45.0%
GCAGTCAACAGTCTAGCTAA+CGG - Chr8:78002533-78002552 None:intergenic 45.0%
GGCCAATTTAAATGGTCCAC+GGG + Chr8:78001993-78002012 MsG0880046780.01.T01:intron 45.0%
GGCCAATTTAAGTGGTACAC+GGG - Chr8:78001289-78001308 None:intergenic 45.0%
TCATGAGGGGAGATCTTGAT+GGG + Chr8:78003084-78003103 MsG0880046780.01.T01:intron 45.0%
TCTTAGACAGAATAGAGGCC+AGG - Chr8:78005197-78005216 None:intergenic 45.0%
TGTGGGATTCTGTCTGTCTT+CGG + Chr8:78003850-78003869 MsG0880046780.01.T01:intron 45.0%
TTTAAATGGTCCACGGGTGA+GGG + Chr8:78001999-78002018 MsG0880046780.01.T01:intron 45.0%
TTTAAGTGGTACACGGGTGA+GGG - Chr8:78001283-78001302 None:intergenic 45.0%
! AGGGTGCCCATTATACTTGT+TGG - Chr8:78004368-78004387 None:intergenic 45.0%
! CCATTTCGGCTTTGACAACA+AGG + Chr8:78002659-78002678 MsG0880046780.01.T01:intron 45.0%
! CCTTGTTGTCAAAGCCGAAA+TGG - Chr8:78002662-78002681 None:intergenic 45.0%
! GGTTTGGAGTGTGAGAGAAA+TGG + Chr8:78001897-78001916 MsG0880046780.01.T01:intron 45.0%
! TAGGAAGAAGTAGTGGGAAG+TGG + Chr8:78003116-78003135 MsG0880046780.01.T01:intron 45.0%
! TCACTAGGAGTCTTGACTTG+TGG + Chr8:78003832-78003851 MsG0880046780.01.T01:intron 45.0%
! TTTCGGCTTTGACAACAAGG+TGG + Chr8:78002662-78002681 MsG0880046780.01.T01:intron 45.0%
!! ATCTCGCTTTTCTGTGCTCT+CGG + Chr8:78005537-78005556 MsG0880046780.01.T01:three_prime_UTR 45.0%
!! CACTAGGAGTCTTGACTTGT+GGG + Chr8:78003833-78003852 MsG0880046780.01.T01:intron 45.0%
!! TATGGTGGATTCTAGGGTGA+GGG - Chr8:78002036-78002055 None:intergenic 45.0%
!! TTATGGTGGATTCTAGGGTG+AGG - Chr8:78002037-78002056 None:intergenic 45.0%
AAAGAAGGATGTGGCGTACG+AGG + Chr8:78002475-78002494 MsG0880046780.01.T01:intron 50.0%
AAAGGTCCACGACCTTCCAA+AGG - Chr8:78004676-78004695 None:intergenic 50.0%
ATGTTAGCTATGGGAGTGGC+GGG + Chr8:78002703-78002722 MsG0880046780.01.T01:intron 50.0%
CAACGAAGAGAGAGAGCTAG+AGG - Chr8:78005285-78005304 None:intergenic 50.0%
CATGAGGGGAGATCTTGATG+GGG + Chr8:78003085-78003104 MsG0880046780.01.T01:intron 50.0%
CCAGACCTGTTCGTGAAGTA+TGG - Chr8:78005119-78005138 None:intergenic 50.0%
CCATACTTCACGAACAGGTC+TGG + Chr8:78005116-78005135 MsG0880046780.01.T01:CDS 50.0%
CCATTACTCGTCCGTCTTGT+AGG - Chr8:78001690-78001709 None:intergenic 50.0%
CCTACAAGACGGACGAGTAA+TGG + Chr8:78001687-78001706 MsG0880046780.01.T01:intron 50.0%
CGCATGTGTCAGTGTCATGT+CGG + Chr8:78000963-78000982 MsG0880046780.01.T01:intron 50.0%
GAGAAGGTAGGACTGGAAAG+TGG - Chr8:78003949-78003968 None:intergenic 50.0%
GCATAAACCACCTCGAATGG+TGG - Chr8:78002147-78002166 None:intergenic 50.0%
GCCAGATCTATTCGCAGACA+TGG + Chr8:78002551-78002570 MsG0880046780.01.T01:intron 50.0%
GTCATGAGGGGAGATCTTGA+TGG + Chr8:78003083-78003102 MsG0880046780.01.T01:intron 50.0%
TACGGAAAGACCACGACTGA+AGG - Chr8:78003983-78004002 None:intergenic 50.0%
TCTATTAAGTCCCTCACCCG+TGG - Chr8:78001289-78001270 None:intergenic 50.0%
TGTACACTGTCCACCATTCG+AGG + Chr8:78002134-78002153 MsG0880046780.01.T01:intron 50.0%
TTGACCGCAAATTGGCAGCA+TGG + Chr8:78002351-78002370 MsG0880046780.01.T01:intron 50.0%
! AGATGGTGAGTTGGAATCGG+TGG + Chr8:78001870-78001889 MsG0880046780.01.T01:intron 50.0%
! CGTGGACCTTTTCTCACGAA+TGG + Chr8:78004685-78004704 MsG0880046780.01.T01:intron 50.0%
! GATTCTCCTTTGGAAGGTCG+TGG + Chr8:78004667-78004686 MsG0880046780.01.T01:intron 50.0%
! TTGTTGTTCGTGAAACGCCC+TGG - Chr8:78003161-78003180 None:intergenic 50.0%
!! AAGTTCAAGTTGTGCTGCGC+AGG + Chr8:78005080-78005099 MsG0880046780.01.T01:CDS 50.0%
!! ATCGGTGGATTCTAGGGTGA+GGG + Chr8:78001246-78001265 MsG0880046780.01.T01:intron 50.0%
!! TAGACCAGATTCTGGCTCAG+TGG + Chr8:78002582-78002601 MsG0880046780.01.T01:intron 50.0%
!! TATCGGTGGATTCTAGGGTG+AGG + Chr8:78001245-78001264 MsG0880046780.01.T01:intron 50.0%
!! TTCTGGCTCAGTGGAATTGC+TGG + Chr8:78002591-78002610 MsG0880046780.01.T01:intron 50.0%
!! TTTTCCCTTTTGGGGGCTAG+AGG + Chr8:78003016-78003035 MsG0880046780.01.T01:intron 50.0%
ACACTGTCCACCATTCGAGG+TGG + Chr8:78002137-78002156 MsG0880046780.01.T01:intron 55.0%
ACAGGTAAGGGTCAGTGCGA+GGG + Chr8:78002324-78002343 MsG0880046780.01.T01:intron 55.0%
AGATCTCCCCTCATGACTGC+TGG - Chr8:78003080-78003099 None:intergenic 55.0%
CAGGGGCAGTTTCCCCATTT+CGG + Chr8:78002645-78002664 MsG0880046780.01.T01:intron 55.0%
CATGAATCCGCTCCTGGCTA+TGG + Chr8:78003054-78003073 MsG0880046780.01.T01:intron 55.0%
CTATGGCCAGCAGTCATGAG+GGG + Chr8:78003071-78003090 MsG0880046780.01.T01:intron 55.0%
GCATCACTCTCAGTCACGTG+TGG + Chr8:78005562-78005581 MsG0880046780.01.T01:three_prime_UTR 55.0%
GCTATGGCCAGCAGTCATGA+GGG + Chr8:78003070-78003089 MsG0880046780.01.T01:intron 55.0%
GGGGAGGAATACGGTGAAAG+AGG - Chr8:78001473-78001492 None:intergenic 55.0%
GTATGGATGGAGAGTTGGCC+TGG + Chr8:78005176-78005195 MsG0880046780.01.T01:CDS 55.0%
GTGTAGCCGTCATAGCAGCA+AGG + Chr8:78004416-78004435 MsG0880046780.01.T01:intron 55.0%
GTGTAGCTGGCAAAGCAGCA+AGG + Chr8:78004515-78004534 MsG0880046780.01.T01:intron 55.0%
! AGGGCAGGTTGACCGCAAAT+TGG + Chr8:78002343-78002362 MsG0880046780.01.T01:intron 55.0%
! GCTCAGTGGAATTGCTGGCT+AGG + Chr8:78002596-78002615 MsG0880046780.01.T01:intron 55.0%
! TGAGTTGGAATCGGTGGTGG+TGG + Chr8:78001876-78001895 MsG0880046780.01.T01:intron 55.0%
! TGGTGAGTTGGAATCGGTGG+TGG + Chr8:78001873-78001892 MsG0880046780.01.T01:intron 55.0%
!! TGGAATCGGTGGTGGTGGTT+TGG + Chr8:78001881-78001900 MsG0880046780.01.T01:intron 55.0%
AGGGACCTCTAGCCCCCAAA+AGG - Chr8:78003024-78003043 None:intergenic 60.0%
CATGACTGCTGGCCATAGCC+AGG - Chr8:78003069-78003088 None:intergenic 60.0%
GAAGGATGTGGCGTACGAGG+AGG + Chr8:78002478-78002497 MsG0880046780.01.T01:intron 60.0%
GACAGGTAAGGGTCAGTGCG+AGG + Chr8:78002323-78002342 MsG0880046780.01.T01:intron 60.0%
GGCTATGGCCAGCAGTCATG+AGG + Chr8:78003069-78003088 MsG0880046780.01.T01:intron 60.0%
GGGACCTCTAGCCCCCAAAA+GGG - Chr8:78003023-78003042 None:intergenic 60.0%
! GCTAACGGGTGCGAGTCAGT+AGG - Chr8:78002518-78002537 None:intergenic 60.0%
CTGCTGGCCATAGCCAGGAG+CGG - Chr8:78003064-78003083 None:intergenic 65.0%
GCAGCCGCAGAGAGAGTGAG+TGG - Chr8:78001391-78001410 None:intergenic 65.0%
GGATGTGGCGTACGAGGAGG+TGG + Chr8:78002481-78002500 MsG0880046780.01.T01:intron 65.0%
GTAAGGGTCAGTGCGAGGGC+AGG + Chr8:78002328-78002347 MsG0880046780.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 78000585 78005793 78000585 ID=MsG0880046780.01;Name=MsG0880046780.01
Chr8 mRNA 78000585 78005793 78000585 ID=MsG0880046780.01.T01;Parent=MsG0880046780.01;Name=MsG0880046780.01.T01;_AED=0.46;_eAED=0.48;_QI=0|1|0.5|1|1|1|2|572|121
Chr8 exon 78000585 78000796 78000585 ID=MsG0880046780.01.T01:exon:18602;Parent=MsG0880046780.01.T01
Chr8 exon 78005068 78005793 78005068 ID=MsG0880046780.01.T01:exon:18603;Parent=MsG0880046780.01.T01
Chr8 CDS 78000585 78000796 78000585 ID=MsG0880046780.01.T01:cds;Parent=MsG0880046780.01.T01
Chr8 CDS 78005068 78005221 78005068 ID=MsG0880046780.01.T01:cds;Parent=MsG0880046780.01.T01
Chr8 three_prime_UTR 78005222 78005793 78005222 ID=MsG0880046780.01.T01:three_prime_utr;Parent=MsG0880046780.01.T01
Gene Sequence

>MsG0880046780.01.T01

ATGAGGATATATGTATTTATATTTATACAATTGATTGTTGATTTTACTTGTTCAGAAATCATGAAGGTGCGTTCATCTGTGAAGAAAATGTGTGAGTATTGTAGGACCATTAAGCGTAAAGGACGAGTTTATATCATGTGTACTGCTAACCCTAAGCATAAACAAAGACAAGGCATGTCAACTTTTGCATATGAAGCTCCGTCGCATCAGCCGTCTGTGGAGATAAGTTCAAGTTGTGCTGCGCAGGAGATTAAGCCAATCCATACTTCACGAACAGGTCTGGCTTCTATAATTCCTCAAAGGCACAGCTTGTCTATGTTGTATGGATGGAGAGTTGGCCTGGCCTCTATTCTGTCTAAGAAGTAG
Protein sequence

>MsG0880046780.01.T01

MRIYVFIFIQLIVDFTCSEIMKVRSSVKKMCEYCRTIKRKGRVYIMCTANPKHKQRQGMSTFAYEAPSHQPSVEISSSCAAQEIKPIHTSRTGLASIIPQRHSLSMLYGWRVGLASILSKK*