Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024363.01.T01 | XP_003611036.1 | 93.103 | 116 | 8 | 0 | 15 | 130 | 115 | 230 | 2.19E-73 | 228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024363.01.T01 | P0CAN7 | 71.552 | 116 | 33 | 0 | 15 | 130 | 121 | 236 | 1.13E-54 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024363.01.T01 | B7FMK2 | 93.103 | 116 | 8 | 0 | 15 | 130 | 115 | 230 | 1.05e-73 | 228 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0580024363.01 | -0.801853 | 7.400559e-49 | 3.571647e-46 |
| MsG0080047957.01 | MsG0580024363.01 | -0.831076 | 2.048515e-55 | 2.199304e-52 |
| MsG0080047959.01 | MsG0580024363.01 | -0.827102 | 1.882995e-54 | 1.800058e-51 |
| MsG0080048231.01 | MsG0580024363.01 | -0.805484 | 1.305503e-49 | 6.915015e-47 |
| MsG0080048464.01 | MsG0580024363.01 | -0.815218 | 1.034921e-51 | 7.091651e-49 |
| MsG0080048532.01 | MsG0580024363.01 | 0.816855 | 4.459702e-52 | 3.196314e-49 |
| MsG0080048683.01 | MsG0580024363.01 | -0.847700 | 9.794762e-60 | 1.755740e-56 |
| MsG0080048761.01 | MsG0580024363.01 | 0.859001 | 5.591860e-63 | 1.454841e-59 |
| MsG0080048764.01 | MsG0580024363.01 | -0.805341 | 1.398830e-49 | 7.382094e-47 |
| MsG0080048809.01 | MsG0580024363.01 | 0.818525 | 1.873273e-52 | 1.405605e-49 |
| MsG0080048865.01 | MsG0580024363.01 | -0.807167 | 5.768560e-50 | 3.190462e-47 |
| MsG0080048874.01 | MsG0580024363.01 | -0.810581 | 1.073763e-50 | 6.497102e-48 |
| MsG0080049148.01 | MsG0580024363.01 | -0.801339 | 9.435962e-49 | 4.495021e-46 |
| MsG0180000091.01 | MsG0580024363.01 | -0.840833 | 6.853921e-58 | 9.883514e-55 |
| MsG0180000097.01 | MsG0580024363.01 | 0.804462 | 2.135675e-49 | 1.101808e-46 |
| MsG0180000116.01 | MsG0580024363.01 | -0.847690 | 9.858081e-60 | 1.766503e-56 |
| MsG0180000145.01 | MsG0580024363.01 | -0.818414 | 1.984819e-52 | 1.484859e-49 |
| MsG0180000240.01 | MsG0580024363.01 | 0.906576 | 1.280224e-80 | 2.182212e-76 |
| MsG0180000241.01 | MsG0580024363.01 | -0.807099 | 5.963393e-50 | 3.292233e-47 |
| MsG0180000251.01 | MsG0580024363.01 | -0.807542 | 4.804838e-50 | 2.683399e-47 |
| MsG0180000255.01 | MsG0580024363.01 | -0.810230 | 1.277881e-50 | 7.660714e-48 |
| MsG0180000280.01 | MsG0580024363.01 | 0.802798 | 4.728381e-49 | 2.337617e-46 |
| MsG0180000402.01 | MsG0580024363.01 | -0.800507 | 1.395262e-48 | 6.507952e-46 |
| MsG0180000470.01 | MsG0580024363.01 | -0.877561 | 5.693099e-69 | 2.874829e-65 |
| MsG0180000526.01 | MsG0580024363.01 | -0.800387 | 1.475953e-48 | 6.863661e-46 |
| MsG0180000649.01 | MsG0580024363.01 | -0.809310 | 2.015291e-50 | 1.179209e-47 |
| MsG0180000650.01 | MsG0580024363.01 | -0.844716 | 6.361465e-59 | 1.036059e-55 |
| MsG0180000652.01 | MsG0580024363.01 | -0.804936 | 1.700664e-49 | 8.882610e-47 |
| MsG0180000702.01 | MsG0580024363.01 | -0.814202 | 1.737236e-51 | 1.158196e-48 |
| MsG0180000814.01 | MsG0580024363.01 | -0.821163 | 4.672053e-53 | 3.772094e-50 |
| MsG0180000828.01 | MsG0580024363.01 | -0.841827 | 3.752897e-58 | 5.581652e-55 |
| MsG0180001063.01 | MsG0580024363.01 | -0.837433 | 5.212974e-57 | 6.770383e-54 |
| MsG0180001088.01 | MsG0580024363.01 | -0.837528 | 4.930346e-57 | 6.422421e-54 |
| MsG0180001663.01 | MsG0580024363.01 | -0.802451 | 5.576697e-49 | 2.732621e-46 |
| MsG0180001712.01 | MsG0580024363.01 | -0.801384 | 9.237296e-49 | 4.405370e-46 |
| MsG0180001892.01 | MsG0580024363.01 | -0.818456 | 1.941783e-52 | 1.454357e-49 |
| MsG0180001971.01 | MsG0580024363.01 | -0.849657 | 2.808637e-60 | 5.362533e-57 |
| MsG0180002195.01 | MsG0580024363.01 | -0.802199 | 6.281883e-49 | 3.058389e-46 |
| MsG0180002282.01 | MsG0580024363.01 | -0.819621 | 1.055212e-52 | 8.161200e-50 |
| MsG0180002492.01 | MsG0580024363.01 | -0.817506 | 3.183000e-52 | 2.322432e-49 |
| MsG0180002680.01 | MsG0580024363.01 | -0.820879 | 5.432411e-53 | 4.351538e-50 |
| MsG0180002842.01 | MsG0580024363.01 | -0.822308 | 2.538970e-53 | 2.117296e-50 |
| MsG0180002977.01 | MsG0580024363.01 | 0.824735 | 6.870077e-54 | 6.138091e-51 |
| MsG0180003188.01 | MsG0580024363.01 | -0.811335 | 7.371602e-51 | 4.550419e-48 |
| MsG0180003193.01 | MsG0580024363.01 | -0.843028 | 1.802241e-58 | 2.783221e-55 |
| MsG0180003309.01 | MsG0580024363.01 | 0.849732 | 2.677601e-60 | 5.124594e-57 |
| MsG0180003673.01 | MsG0580024363.01 | -0.823500 | 1.339838e-53 | 1.155703e-50 |
| MsG0180003686.01 | MsG0580024363.01 | -0.811651 | 6.293938e-51 | 3.917651e-48 |
| MsG0180003725.01 | MsG0580024363.01 | -0.813978 | 1.946398e-51 | 1.289780e-48 |
| MsG0180004025.01 | MsG0580024363.01 | -0.827896 | 1.214425e-54 | 1.188144e-51 |
| MsG0180004085.01 | MsG0580024363.01 | -0.835521 | 1.598635e-56 | 1.959678e-53 |
| MsG0180004088.01 | MsG0580024363.01 | -0.825429 | 4.710859e-54 | 4.292508e-51 |
| MsG0180004264.01 | MsG0580024363.01 | -0.838922 | 2.156590e-57 | 2.931309e-54 |
| MsG0180004390.01 | MsG0580024363.01 | -0.811049 | 8.503661e-51 | 5.210222e-48 |
| MsG0180004600.01 | MsG0580024363.01 | -0.835006 | 2.157070e-56 | 2.603794e-53 |
| MsG0180004602.01 | MsG0580024363.01 | -0.801529 | 8.627028e-49 | 4.129420e-46 |
| MsG0180004667.01 | MsG0580024363.01 | 0.821133 | 4.748624e-53 | 3.830699e-50 |
| MsG0180004765.01 | MsG0580024363.01 | -0.835768 | 1.384677e-56 | 1.710022e-53 |
| MsG0180004926.01 | MsG0580024363.01 | -0.857864 | 1.220725e-62 | 3.056037e-59 |
| MsG0180005050.01 | MsG0580024363.01 | -0.810865 | 9.320268e-51 | 5.682714e-48 |
| MsG0180005185.01 | MsG0580024363.01 | -0.843114 | 1.709185e-58 | 2.646783e-55 |
| MsG0180005279.01 | MsG0580024363.01 | -0.839219 | 1.806540e-57 | 2.478133e-54 |
| MsG0180005303.01 | MsG0580024363.01 | 0.806615 | 7.546509e-50 | 4.114523e-47 |
| MsG0180005457.01 | MsG0580024363.01 | -0.856025 | 4.250853e-62 | 1.000806e-58 |
| MsG0180005515.01 | MsG0580024363.01 | 0.813286 | 2.764846e-51 | 1.798034e-48 |
| MsG0180005705.01 | MsG0580024363.01 | -0.804138 | 2.493894e-49 | 1.276008e-46 |
| MsG0180005730.01 | MsG0580024363.01 | -0.852963 | 3.270119e-61 | 6.952976e-58 |
| MsG0180005732.01 | MsG0580024363.01 | -0.854666 | 1.057079e-61 | 2.378646e-58 |
| MsG0180005881.01 | MsG0580024363.01 | 0.817908 | 2.583783e-52 | 1.905960e-49 |
| MsG0180006054.01 | MsG0580024363.01 | -0.852397 | 4.743137e-61 | 9.897617e-58 |
| MsG0180006064.01 | MsG0580024363.01 | 0.897400 | 1.459349e-76 | 1.645556e-72 |
| MsG0180006210.01 | MsG0580024363.01 | 0.872946 | 2.150909e-67 | 9.167580e-64 |
| MsG0180006251.01 | MsG0580024363.01 | -0.805511 | 1.288701e-49 | 6.830443e-47 |
| MsG0280006346.01 | MsG0580024363.01 | 0.908592 | 1.443919e-81 | 2.697117e-77 |
| MsG0280010551.01 | MsG0580024363.01 | -0.816018 | 6.863360e-52 | 4.807873e-49 |
| MsG0280010598.01 | MsG0580024363.01 | -0.815960 | 7.073854e-52 | 4.947262e-49 |
| MsG0280010604.01 | MsG0580024363.01 | 0.813676 | 2.268970e-51 | 1.491348e-48 |
| MsG0280010722.01 | MsG0580024363.01 | -0.825686 | 4.093982e-54 | 3.758224e-51 |
| MsG0280010796.01 | MsG0580024363.01 | -0.819396 | 1.187457e-52 | 9.126640e-50 |
| MsG0280010807.01 | MsG0580024363.01 | -0.841633 | 4.222578e-58 | 6.242361e-55 |
| MsG0280010916.01 | MsG0580024363.01 | -0.843936 | 1.031274e-58 | 1.639106e-55 |
| MsG0280011032.01 | MsG0580024363.01 | -0.832810 | 7.643848e-56 | 8.638629e-53 |
| MsG0280011052.01 | MsG0580024363.01 | -0.802186 | 6.321960e-49 | 3.076909e-46 |
| MsG0280011059.01 | MsG0580024363.01 | 0.849455 | 3.199343e-60 | 6.068134e-57 |
| MsG0280011131.01 | MsG0580024363.01 | -0.800551 | 1.366694e-48 | 6.381878e-46 |
| MsG0280011163.01 | MsG0580024363.01 | -0.879958 | 8.141381e-70 | 4.504325e-66 |
| MsG0280011216.01 | MsG0580024363.01 | -0.823944 | 1.054213e-53 | 9.208371e-51 |
| MsG0280011217.01 | MsG0580024363.01 | -0.802516 | 5.405335e-49 | 2.652999e-46 |
| MsG0280011272.01 | MsG0580024363.01 | 0.842356 | 2.718069e-58 | 4.110885e-55 |
| MsG0280011376.01 | MsG0580024363.01 | -0.854954 | 8.725364e-62 | 1.982243e-58 |
| MsG0280011404.01 | MsG0580024363.01 | -0.810852 | 9.382324e-51 | 5.718612e-48 |
| MsG0380011609.01 | MsG0580024363.01 | -0.807179 | 5.736612e-50 | 3.173742e-47 |
| MsG0380011663.01 | MsG0580024363.01 | -0.809461 | 1.871207e-50 | 1.099277e-47 |
| MsG0380011716.01 | MsG0580024363.01 | -0.813650 | 2.299305e-51 | 1.510220e-48 |
| MsG0380011895.01 | MsG0580024363.01 | -0.831715 | 1.426407e-55 | 1.560877e-52 |
| MsG0380012005.01 | MsG0580024363.01 | -0.855895 | 4.641073e-62 | 1.087871e-58 |
| MsG0380012007.01 | MsG0580024363.01 | -0.833642 | 4.743530e-56 | 5.495875e-53 |
| MsG0380012067.01 | MsG0580024363.01 | -0.814431 | 1.546508e-51 | 1.037510e-48 |
| MsG0380012085.01 | MsG0580024363.01 | -0.893260 | 7.419018e-75 | 7.018427e-71 |
| MsG0380012091.01 | MsG0580024363.01 | -0.870214 | 1.727713e-66 | 6.667009e-63 |
| MsG0380012101.01 | MsG0580024363.01 | -0.802474 | 5.514170e-49 | 2.703606e-46 |
| MsG0380012279.01 | MsG0580024363.01 | 0.843491 | 1.356203e-58 | 2.125396e-55 |
| MsG0380012319.01 | MsG0580024363.01 | -0.814394 | 1.575554e-51 | 1.055998e-48 |
| MsG0380012321.01 | MsG0580024363.01 | -0.801697 | 7.967682e-49 | 3.829902e-46 |
| MsG0380012324.01 | MsG0580024363.01 | -0.810031 | 1.410819e-50 | 8.414407e-48 |
| MsG0380012330.01 | MsG0580024363.01 | -0.809641 | 1.711535e-50 | 1.010402e-47 |
| MsG0380012357.01 | MsG0580024363.01 | -0.815579 | 8.600167e-52 | 5.952362e-49 |
| MsG0380012361.01 | MsG0580024363.01 | -0.809125 | 2.208731e-50 | 1.286050e-47 |
| MsG0380012362.01 | MsG0580024363.01 | -0.840333 | 9.265019e-58 | 1.315335e-54 |
| MsG0380012365.01 | MsG0580024363.01 | -0.853409 | 2.436166e-61 | 5.258843e-58 |
| MsG0380012394.01 | MsG0580024363.01 | -0.807455 | 5.011838e-50 | 2.792855e-47 |
| MsG0380012702.01 | MsG0580024363.01 | -0.813660 | 2.287750e-51 | 1.503023e-48 |
| MsG0380013474.01 | MsG0580024363.01 | -0.817268 | 3.601497e-52 | 2.610476e-49 |
| MsG0380013853.01 | MsG0580024363.01 | -0.812745 | 3.632641e-51 | 2.328457e-48 |
| MsG0380014251.01 | MsG0580024363.01 | -0.833677 | 4.649173e-56 | 5.392260e-53 |
| MsG0380014288.01 | MsG0580024363.01 | -0.816153 | 6.403225e-52 | 4.502183e-49 |
| MsG0380014468.01 | MsG0580024363.01 | -0.834069 | 3.708850e-56 | 4.352750e-53 |
| MsG0380014573.01 | MsG0580024363.01 | -0.810399 | 1.175313e-50 | 7.076955e-48 |
| MsG0380014706.01 | MsG0580024363.01 | -0.818051 | 2.398082e-52 | 1.775924e-49 |
| MsG0380014727.01 | MsG0580024363.01 | -0.858113 | 1.029149e-62 | 2.598154e-59 |
| MsG0380014770.01 | MsG0580024363.01 | -0.833428 | 5.363692e-56 | 6.175113e-53 |
| MsG0380014866.01 | MsG0580024363.01 | -0.848117 | 7.518035e-60 | 1.365211e-56 |
| MsG0380014894.01 | MsG0580024363.01 | -0.816522 | 5.295646e-52 | 3.761014e-49 |
| MsG0480018653.01 | MsG0580024363.01 | -0.827854 | 1.242896e-54 | 1.214564e-51 |
| MsG0480018778.01 | MsG0580024363.01 | -0.834425 | 3.018974e-56 | 3.581561e-53 |
| MsG0480018872.01 | MsG0580024363.01 | -0.823821 | 1.126784e-53 | 9.808355e-51 |
| MsG0480018883.01 | MsG0580024363.01 | -0.884915 | 1.274519e-71 | 8.568819e-68 |
| MsG0480018964.01 | MsG0580024363.01 | -0.823044 | 1.711543e-53 | 1.457524e-50 |
| MsG0480019035.01 | MsG0580024363.01 | -0.820728 | 5.882624e-53 | 4.692104e-50 |
| MsG0480019335.01 | MsG0580024363.01 | -0.820440 | 6.850040e-53 | 5.420559e-50 |
| MsG0480019435.01 | MsG0580024363.01 | -0.836198 | 1.076838e-56 | 1.347594e-53 |
| MsG0480019547.01 | MsG0580024363.01 | -0.815954 | 7.095193e-52 | 4.961338e-49 |
| MsG0480019689.01 | MsG0580024363.01 | 0.821942 | 3.087697e-53 | 2.548004e-50 |
| MsG0480019730.01 | MsG0580024363.01 | -0.808878 | 2.494116e-50 | 1.442560e-47 |
| MsG0480019970.01 | MsG0580024363.01 | -0.804066 | 2.581569e-49 | 1.318476e-46 |
| MsG0480020024.01 | MsG0580024363.01 | -0.851828 | 6.883006e-61 | 1.410617e-57 |
| MsG0480020322.01 | MsG0580024363.01 | -0.817139 | 3.850530e-52 | 2.781315e-49 |
| MsG0480020323.01 | MsG0580024363.01 | -0.829932 | 3.902880e-55 | 4.052445e-52 |
| MsG0480020327.01 | MsG0580024363.01 | 0.843694 | 1.197067e-58 | 1.888073e-55 |
| MsG0480020410.01 | MsG0580024363.01 | 0.809288 | 2.037701e-50 | 1.191635e-47 |
| MsG0480020634.01 | MsG0580024363.01 | -0.825129 | 5.546676e-54 | 5.011606e-51 |
| MsG0480020765.01 | MsG0580024363.01 | -0.833037 | 6.713595e-56 | 7.639649e-53 |
| MsG0480020788.01 | MsG0580024363.01 | -0.815387 | 9.488404e-52 | 6.532685e-49 |
| MsG0480020832.01 | MsG0580024363.01 | -0.816086 | 6.628459e-52 | 4.651993e-49 |
| MsG0480020887.01 | MsG0580024363.01 | -0.811841 | 5.721922e-51 | 3.579772e-48 |
| MsG0480020935.01 | MsG0580024363.01 | 0.873260 | 1.688138e-67 | 7.278854e-64 |
| MsG0480020964.01 | MsG0580024363.01 | -0.804809 | 1.807160e-49 | 9.408167e-47 |
| MsG0480021274.01 | MsG0580024363.01 | -0.812158 | 4.880449e-51 | 3.079784e-48 |
| MsG0480021280.01 | MsG0580024363.01 | -0.813250 | 2.814956e-51 | 1.828790e-48 |
| MsG0480021426.01 | MsG0580024363.01 | -0.804247 | 2.367356e-49 | 1.214574e-46 |
| MsG0480021558.01 | MsG0580024363.01 | -0.803929 | 2.757256e-49 | 1.403274e-46 |
| MsG0480021776.01 | MsG0580024363.01 | 0.806047 | 9.941506e-50 | 5.342564e-47 |
| MsG0480021853.01 | MsG0580024363.01 | -0.829117 | 6.159367e-55 | 6.244633e-52 |
| MsG0480021869.01 | MsG0580024363.01 | -0.841487 | 4.611870e-58 | 6.787267e-55 |
| MsG0480021917.01 | MsG0580024363.01 | -0.802872 | 4.564687e-49 | 2.260895e-46 |
| MsG0480021918.01 | MsG0580024363.01 | -0.857393 | 1.683067e-62 | 4.147664e-59 |
| MsG0480021925.01 | MsG0580024363.01 | -0.855775 | 5.032186e-62 | 1.174905e-58 |
| MsG0480021927.01 | MsG0580024363.01 | -0.828835 | 7.207126e-55 | 7.246056e-52 |
| MsG0480021948.01 | MsG0580024363.01 | -0.865597 | 5.261531e-65 | 1.721688e-61 |
| MsG0480022068.01 | MsG0580024363.01 | -0.834156 | 3.527922e-56 | 4.150916e-53 |
| MsG0480022105.01 | MsG0580024363.01 | -0.804612 | 1.987350e-49 | 1.029278e-46 |
| MsG0480022145.01 | MsG0580024363.01 | -0.801609 | 8.305490e-49 | 3.983399e-46 |
| MsG0480022169.01 | MsG0580024363.01 | -0.801079 | 1.066319e-48 | 5.046683e-46 |
| MsG0480022259.01 | MsG0580024363.01 | -0.833171 | 6.215673e-56 | 7.101443e-53 |
| MsG0480022262.01 | MsG0580024363.01 | -0.819396 | 1.187042e-52 | 9.123638e-50 |
| MsG0480022482.01 | MsG0580024363.01 | -0.803097 | 4.101256e-49 | 2.042898e-46 |
| MsG0480022533.01 | MsG0580024363.01 | -0.852720 | 3.835664e-61 | 8.088484e-58 |
| MsG0480022535.01 | MsG0580024363.01 | -0.820995 | 5.108941e-53 | 4.105887e-50 |
| MsG0480022575.01 | MsG0580024363.01 | -0.836921 | 7.046451e-57 | 9.009690e-54 |
| MsG0480022615.01 | MsG0580024363.01 | 0.916692 | 1.311660e-85 | 3.647641e-81 |
| MsG0480022686.01 | MsG0580024363.01 | 0.845871 | 3.097983e-59 | 5.236108e-56 |
| MsG0480022739.01 | MsG0580024363.01 | 0.804526 | 2.070820e-49 | 1.070089e-46 |
| MsG0480022750.01 | MsG0580024363.01 | -0.808307 | 3.303068e-50 | 1.882139e-47 |
| MsG0480022756.01 | MsG0580024363.01 | 0.828059 | 1.109550e-54 | 1.090758e-51 |
| MsG0480022762.01 | MsG0580024363.01 | -0.801422 | 9.072210e-49 | 4.330774e-46 |
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| MsG0580024363.01 | MsG0880042118.01 | -0.837385 | 5.363845e-57 | 6.955339e-54 |
| MsG0580024363.01 | MsG0880042161.01 | -0.875248 | 3.577836e-68 | 1.659205e-64 |
| MsG0580024363.01 | MsG0880042247.01 | -0.810231 | 1.277484e-50 | 7.658385e-48 |
| MsG0580024363.01 | MsG0880042276.01 | -0.809623 | 1.726959e-50 | 1.019010e-47 |
| MsG0580024363.01 | MsG0880042301.01 | -0.802789 | 4.747939e-49 | 2.346778e-46 |
| MsG0580024363.01 | MsG0880042305.01 | -0.813590 | 2.369543e-51 | 1.553859e-48 |
| MsG0580024363.01 | MsG0880042314.01 | -0.802622 | 5.141390e-49 | 2.530332e-46 |
| MsG0580024363.01 | MsG0880042404.01 | -0.813074 | 3.076590e-51 | 1.989255e-48 |
| MsG0580024363.01 | MsG0880042434.01 | -0.831572 | 1.546720e-55 | 1.685311e-52 |
| MsG0580024363.01 | MsG0880042435.01 | 0.812580 | 3.946668e-51 | 2.518774e-48 |
| MsG0580024363.01 | MsG0880042656.01 | -0.827398 | 1.599493e-54 | 1.542552e-51 |
| MsG0580024363.01 | MsG0880042698.01 | -0.845307 | 4.405536e-59 | 7.311166e-56 |
| MsG0580024363.01 | MsG0880042700.01 | -0.805682 | 1.186218e-49 | 6.315550e-47 |
| MsG0580024363.01 | MsG0880042743.01 | -0.805734 | 1.157106e-49 | 6.168892e-47 |
| MsG0580024363.01 | MsG0880042966.01 | -0.826405 | 2.762969e-54 | 2.588821e-51 |
| MsG0580024363.01 | MsG0880043157.01 | -0.862707 | 4.189205e-64 | 1.238379e-60 |
| MsG0580024363.01 | MsG0880043214.01 | -0.808728 | 2.685226e-50 | 1.546947e-47 |
| MsG0580024363.01 | MsG0880043292.01 | -0.808683 | 2.745512e-50 | 1.579825e-47 |
| MsG0580024363.01 | MsG0880043479.01 | -0.807639 | 4.581089e-50 | 2.564908e-47 |
| MsG0580024363.01 | MsG0880043521.01 | -0.813228 | 2.847027e-51 | 1.848474e-48 |
| MsG0580024363.01 | MsG0880043812.01 | -0.821704 | 3.505309e-53 | 2.873220e-50 |
| MsG0580024363.01 | MsG0880043937.01 | -0.848155 | 7.339324e-60 | 1.334423e-56 |
| MsG0580024363.01 | MsG0880043941.01 | -0.859153 | 5.037317e-63 | 1.317305e-59 |
| MsG0580024363.01 | MsG0880044079.01 | -0.815542 | 8.763533e-52 | 6.059429e-49 |
| MsG0580024363.01 | MsG0880044209.01 | -0.838227 | 3.258780e-57 | 4.336395e-54 |
| MsG0580024363.01 | MsG0880044210.01 | -0.808142 | 3.581237e-50 | 2.031851e-47 |
| MsG0580024363.01 | MsG0880044389.01 | 0.815739 | 7.922689e-52 | 5.507953e-49 |
| MsG0580024363.01 | MsG0880044455.01 | 0.831098 | 2.023563e-55 | 2.173855e-52 |
| MsG0580024363.01 | MsG0880044572.01 | -0.826054 | 3.347494e-54 | 3.105274e-51 |
| MsG0580024363.01 | MsG0880044573.01 | -0.880732 | 4.306924e-70 | 2.455976e-66 |
| MsG0580024363.01 | MsG0880044574.01 | -0.854778 | 9.812451e-62 | 2.216359e-58 |
| MsG0580024363.01 | MsG0880044611.01 | 0.827098 | 1.887198e-54 | 1.803868e-51 |
| MsG0580024363.01 | MsG0880045094.01 | -0.814326 | 1.631152e-51 | 1.091169e-48 |
| MsG0580024363.01 | MsG0880045111.01 | -0.813574 | 2.389340e-51 | 1.566108e-48 |
| MsG0580024363.01 | MsG0880045155.01 | 0.820209 | 7.741471e-53 | 6.086693e-50 |
| MsG0580024363.01 | MsG0880045362.01 | -0.800845 | 1.190696e-48 | 5.601835e-46 |
| MsG0580024363.01 | MsG0880045371.01 | -0.859447 | 4.110052e-63 | 1.085861e-59 |
| MsG0580024363.01 | MsG0880045387.01 | -0.800390 | 1.474069e-48 | 6.855337e-46 |
| MsG0580024363.01 | MsG0880045605.01 | 0.803909 | 2.783643e-49 | 1.415955e-46 |
| MsG0580024363.01 | MsG0880045639.01 | -0.809102 | 2.234029e-50 | 1.299965e-47 |
| MsG0580024363.01 | MsG0880045706.01 | -0.849621 | 2.875349e-60 | 5.483576e-57 |
| MsG0580024363.01 | MsG0880045707.01 | 0.835948 | 1.246267e-56 | 1.547420e-53 |
| MsG0580024363.01 | MsG0880045756.01 | -0.808402 | 3.152068e-50 | 1.800627e-47 |
| MsG0580024363.01 | MsG0880045765.01 | -0.838013 | 3.700799e-57 | 4.893633e-54 |
| MsG0580024363.01 | MsG0880045783.01 | -0.806002 | 1.016226e-49 | 5.455075e-47 |
| MsG0580024363.01 | MsG0880045926.01 | -0.846149 | 2.603080e-59 | 4.438328e-56 |
| MsG0580024363.01 | MsG0880045992.01 | -0.857655 | 1.407841e-62 | 3.500240e-59 |
| MsG0580024363.01 | MsG0880046073.01 | -0.800398 | 1.468738e-48 | 6.831909e-46 |
| MsG0580024363.01 | MsG0880046114.01 | -0.812545 | 4.016991e-51 | 2.561430e-48 |
| MsG0580024363.01 | MsG0880046264.01 | -0.820460 | 6.780973e-53 | 5.368880e-50 |
| MsG0580024363.01 | MsG0880046384.01 | 0.801236 | 9.902305e-49 | 4.705064e-46 |
| MsG0580024363.01 | MsG0880046457.01 | -0.822659 | 2.104453e-53 | 1.772611e-50 |
| MsG0580024363.01 | MsG0880046531.01 | -0.821700 | 3.512330e-53 | 2.878638e-50 |
| MsG0580024363.01 | MsG0880046645.01 | -0.840129 | 1.047116e-57 | 1.477424e-54 |
| MsG0580024363.01 | MsG0880046780.01 | 0.803273 | 3.771721e-49 | 1.887308e-46 |
| MsG0580024363.01 | MsG0880046809.01 | -0.856737 | 2.627091e-62 | 6.331179e-59 |
| MsG0580024363.01 | MsG0880047010.01 | -0.801766 | 7.713344e-49 | 3.714117e-46 |
| MsG0580024363.01 | MsG0880047045.01 | -0.801272 | 9.735056e-49 | 4.629783e-46 |
| MsG0580024363.01 | MsG0880047046.01 | -0.803155 | 3.989131e-49 | 1.990138e-46 |
| MsG0580024363.01 | MsG0880047055.01 | 0.819739 | 9.915022e-53 | 7.694417e-50 |
| MsG0580024363.01 | MsG0880047285.01 | 0.807391 | 5.171328e-50 | 2.876892e-47 |
| MsG0580024363.01 | MsG0880047294.01 | -0.823650 | 1.235901e-53 | 1.070628e-50 |
| MsG0580024363.01 | MsG0880047425.01 | -0.816728 | 4.761179e-52 | 3.400491e-49 |
| MsG0580024363.01 | MsG0880047481.01 | 0.838409 | 2.925386e-57 | 3.914785e-54 |
| MsG0580024363.01 | MsG0880047689.01 | 0.814093 | 1.836320e-51 | 1.220638e-48 |
| MsG0380014948.01 | MsG0580024363.01 | -0.803574 | 3.267108e-49 | 1.647635e-46 |
| MsG0380014981.01 | MsG0580024363.01 | -0.800326 | 1.519136e-48 | 7.053618e-46 |
| MsG0380015034.01 | MsG0580024363.01 | -0.802622 | 5.141887e-49 | 2.530541e-46 |
| MsG0380015038.01 | MsG0580024363.01 | -0.815360 | 9.621917e-52 | 6.619653e-49 |
| MsG0380015039.01 | MsG0580024363.01 | -0.806764 | 7.020393e-50 | 3.842375e-47 |
| MsG0380015049.01 | MsG0580024363.01 | -0.809132 | 2.200968e-50 | 1.281770e-47 |
| MsG0380015215.01 | MsG0580024363.01 | 0.823961 | 1.044932e-53 | 9.131459e-51 |
| MsG0380015374.01 | MsG0580024363.01 | -0.850894 | 1.264038e-60 | 2.513250e-57 |
| MsG0380015497.01 | MsG0580024363.01 | -0.802523 | 5.387998e-49 | 2.644912e-46 |
| MsG0380015533.01 | MsG0580024363.01 | -0.820874 | 5.446989e-53 | 4.362609e-50 |
| MsG0380015589.01 | MsG0580024363.01 | -0.822744 | 2.010781e-53 | 1.697841e-50 |
| MsG0380015847.01 | MsG0580024363.01 | 0.811419 | 7.067779e-51 | 4.372846e-48 |
| MsG0380015849.01 | MsG0580024363.01 | 0.803719 | 3.048677e-49 | 1.543080e-46 |
| MsG0380015891.01 | MsG0580024363.01 | -0.807214 | 5.639512e-50 | 3.122868e-47 |
| MsG0380016004.01 | MsG0580024363.01 | -0.823648 | 1.236987e-53 | 1.071507e-50 |
| MsG0380016064.01 | MsG0580024363.01 | -0.843578 | 1.285780e-58 | 2.020706e-55 |
| MsG0380016182.01 | MsG0580024363.01 | -0.859375 | 4.320714e-63 | 1.138773e-59 |
| MsG0380016191.01 | MsG0580024363.01 | 0.874346 | 7.253883e-68 | 3.254011e-64 |
| MsG0380016285.01 | MsG0580024363.01 | -0.844107 | 9.277834e-59 | 1.482448e-55 |
| MsG0380016391.01 | MsG0580024363.01 | -0.824157 | 9.396688e-54 | 8.256893e-51 |
| MsG0380016475.01 | MsG0580024363.01 | -0.811257 | 7.665416e-51 | 4.722316e-48 |
| MsG0380016517.01 | MsG0580024363.01 | -0.811508 | 6.758629e-51 | 4.191558e-48 |
| MsG0380016694.01 | MsG0580024363.01 | -0.828126 | 1.068786e-54 | 1.052765e-51 |
| MsG0380016828.01 | MsG0580024363.01 | 0.815053 | 1.126022e-51 | 7.681579e-49 |
| MsG0380016910.01 | MsG0580024363.01 | -0.820098 | 8.207420e-53 | 6.433956e-50 |
| MsG0380017048.01 | MsG0580024363.01 | -0.857317 | 1.771909e-62 | 4.355377e-59 |
| MsG0380017060.01 | MsG0580024363.01 | -0.801648 | 8.153565e-49 | 3.914475e-46 |
| MsG0380017178.01 | MsG0580024363.01 | 0.888184 | 7.392189e-73 | 5.667355e-69 |
| MsG0380017202.01 | MsG0580024363.01 | -0.820915 | 5.328363e-53 | 4.272507e-50 |
| MsG0380017220.01 | MsG0580024363.01 | -0.888025 | 8.505289e-73 | 6.477778e-69 |
| MsG0380017233.01 | MsG0580024363.01 | -0.822334 | 2.504694e-53 | 2.090307e-50 |
| MsG0380017244.01 | MsG0580024363.01 | -0.802856 | 4.599898e-49 | 2.277384e-46 |
| MsG0380017263.01 | MsG0580024363.01 | 0.857989 | 1.120820e-62 | 2.817915e-59 |
| MsG0380017266.01 | MsG0580024363.01 | 0.850212 | 1.965537e-60 | 3.821731e-57 |
| MsG0380017322.01 | MsG0580024363.01 | -0.823721 | 1.188980e-53 | 1.032142e-50 |
| MsG0380017326.01 | MsG0580024363.01 | -0.803844 | 2.871143e-49 | 1.458021e-46 |
| MsG0380017437.01 | MsG0580024363.01 | 0.862521 | 4.776860e-64 | 1.403067e-60 |
| MsG0380017461.01 | MsG0580024363.01 | -0.812648 | 3.814017e-51 | 2.438456e-48 |
| MsG0380017551.01 | MsG0580024363.01 | 0.872542 | 2.936623e-67 | 1.233722e-63 |
| MsG0380017584.01 | MsG0580024363.01 | -0.830061 | 3.630671e-55 | 3.783557e-52 |
| MsG0380017625.01 | MsG0580024363.01 | -0.822208 | 2.679406e-53 | 2.227939e-50 |
| MsG0380017746.01 | MsG0580024363.01 | -0.805283 | 1.438286e-49 | 7.578882e-47 |
| MsG0380017941.01 | MsG0580024363.01 | -0.809961 | 1.460951e-50 | 8.697249e-48 |
| MsG0480018128.01 | MsG0580024363.01 | -0.819168 | 1.337807e-52 | 1.021766e-49 |
| MsG0480018163.01 | MsG0580024363.01 | -0.805614 | 1.226004e-49 | 6.515573e-47 |
| MsG0480018183.01 | MsG0580024363.01 | -0.858903 | 5.983428e-63 | 1.551405e-59 |
| MsG0480018236.01 | MsG0580024363.01 | -0.877575 | 5.628226e-69 | 2.843528e-65 |
| MsG0480018251.01 | MsG0580024363.01 | -0.823414 | 1.403061e-53 | 1.207143e-50 |
| MsG0480018318.01 | MsG0580024363.01 | -0.865971 | 4.008479e-65 | 1.329045e-61 |
| MsG0480018331.01 | MsG0580024363.01 | -0.818372 | 2.029171e-52 | 1.516250e-49 |
| MsG0480018347.01 | MsG0580024363.01 | -0.803302 | 3.720270e-49 | 1.862901e-46 |
| MsG0280006491.01 | MsG0580024363.01 | -0.815044 | 1.130691e-51 | 7.711953e-49 |
| MsG0280006554.01 | MsG0580024363.01 | -0.800332 | 1.514357e-48 | 7.032583e-46 |
| MsG0280006588.01 | MsG0580024363.01 | -0.827946 | 1.181117e-54 | 1.157272e-51 |
| MsG0280006589.01 | MsG0580024363.01 | -0.803886 | 2.814438e-49 | 1.430774e-46 |
| MsG0280006601.01 | MsG0580024363.01 | -0.835770 | 1.382673e-56 | 1.707693e-53 |
| MsG0280006711.01 | MsG0580024363.01 | 0.819424 | 1.169902e-52 | 8.999266e-50 |
| MsG0280006753.01 | MsG0580024363.01 | 0.879381 | 1.305888e-69 | 7.065265e-66 |
| MsG0280006769.01 | MsG0580024363.01 | -0.802576 | 5.253543e-49 | 2.582465e-46 |
| MsG0280006770.01 | MsG0580024363.01 | -0.829067 | 6.335018e-55 | 6.412807e-52 |
| MsG0280007023.01 | MsG0580024363.01 | -0.817034 | 4.065289e-52 | 2.928052e-49 |
| MsG0280007064.01 | MsG0580024363.01 | -0.803802 | 2.930246e-49 | 1.486331e-46 |
| MsG0280007066.01 | MsG0580024363.01 | -0.859194 | 4.895795e-63 | 1.282170e-59 |
| MsG0280007072.01 | MsG0580024363.01 | -0.835918 | 1.268461e-56 | 1.573606e-53 |
| MsG0280007164.01 | MsG0580024363.01 | -0.802164 | 6.389207e-49 | 3.107963e-46 |
| MsG0280007224.01 | MsG0580024363.01 | 0.869714 | 2.516905e-66 | 9.538484e-63 |
| MsG0280007335.01 | MsG0580024363.01 | -0.802669 | 5.028294e-49 | 2.477588e-46 |
| MsG0280007459.01 | MsG0580024363.01 | -0.804003 | 2.660635e-49 | 1.356623e-46 |
| MsG0280007496.01 | MsG0580024363.01 | -0.834352 | 3.149161e-56 | 3.727637e-53 |
| MsG0280007547.01 | MsG0580024363.01 | -0.862319 | 5.513471e-64 | 1.607997e-60 |
| MsG0280007698.01 | MsG0580024363.01 | -0.801133 | 1.039596e-48 | 4.926928e-46 |
| MsG0280007763.01 | MsG0580024363.01 | -0.829721 | 4.392556e-55 | 4.533383e-52 |
| MsG0280007826.01 | MsG0580024363.01 | -0.832837 | 7.524789e-56 | 8.511065e-53 |
| MsG0280007864.01 | MsG0580024363.01 | 0.912338 | 2.183837e-83 | 4.889932e-79 |
| MsG0280007955.01 | MsG0580024363.01 | -0.812661 | 3.789376e-51 | 2.423545e-48 |
| MsG0280007984.01 | MsG0580024363.01 | -0.805653 | 1.203088e-49 | 6.400392e-47 |
| MsG0280008112.01 | MsG0580024363.01 | -0.820430 | 6.886598e-53 | 5.448029e-50 |
| MsG0280008113.01 | MsG0580024363.01 | -0.813879 | 2.047230e-51 | 1.353023e-48 |
| MsG0280008363.01 | MsG0580024363.01 | -0.810285 | 1.243404e-50 | 7.464637e-48 |
| MsG0280008377.01 | MsG0580024363.01 | -0.806091 | 9.733341e-50 | 5.236479e-47 |
| MsG0280008378.01 | MsG0580024363.01 | -0.804782 | 1.831331e-49 | 9.527008e-47 |
| MsG0280008456.01 | MsG0580024363.01 | -0.807805 | 4.223693e-50 | 2.375118e-47 |
| MsG0280008515.01 | MsG0580024363.01 | -0.802690 | 4.978172e-49 | 2.454232e-46 |
| MsG0280008615.01 | MsG0580024363.01 | -0.807089 | 5.992414e-50 | 3.307462e-47 |
| MsG0280008660.01 | MsG0580024363.01 | 0.827525 | 1.491101e-54 | 1.443092e-51 |
| MsG0280008894.01 | MsG0580024363.01 | -0.862141 | 6.252453e-64 | 1.812093e-60 |
| MsG0280009754.01 | MsG0580024363.01 | -0.826877 | 2.131278e-54 | 2.024066e-51 |
| MsG0280010349.01 | MsG0580024363.01 | -0.810457 | 1.141962e-50 | 6.886747e-48 |
| MsG0280010350.01 | MsG0580024363.01 | -0.810507 | 1.114026e-50 | 6.727376e-48 |
| MsG0280010378.01 | MsG0580024363.01 | -0.853312 | 2.596587e-61 | 5.586635e-58 |
| MsG0280010443.01 | MsG0580024363.01 | -0.866703 | 2.348825e-65 | 7.991903e-62 |
| MsG0280010517.01 | MsG0580024363.01 | -0.827589 | 1.439402e-54 | 1.395561e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024363.01.T01 | MTR_5g009720 | 93.103 | 116 | 8 | 0 | 15 | 130 | 115 | 230 | 2.66e-77 | 228 |
| MsG0580024363.01.T01 | MTR_8g099190 | 77.391 | 115 | 26 | 0 | 15 | 129 | 125 | 239 | 1.53e-59 | 184 |
| MsG0580024363.01.T01 | MTR_8g099190 | 70.079 | 127 | 26 | 1 | 15 | 129 | 125 | 251 | 1.14e-55 | 174 |
| MsG0580024363.01.T01 | MTR_8g099190 | 75.510 | 98 | 24 | 0 | 32 | 129 | 127 | 224 | 1.86e-47 | 152 |
| MsG0580024363.01.T01 | MTR_4g073800 | 62.617 | 107 | 38 | 1 | 15 | 119 | 115 | 221 | 4.83e-41 | 137 |
| MsG0580024363.01.T01 | MTR_8g099190 | 70.833 | 72 | 21 | 0 | 15 | 86 | 125 | 196 | 1.07e-30 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024363.01.T01 | AT1G64200 | 71.552 | 116 | 33 | 0 | 15 | 130 | 121 | 236 | 1.15e-55 | 174 |
| MsG0580024363.01.T01 | AT4G11150 | 73.276 | 116 | 31 | 0 | 15 | 130 | 115 | 230 | 3.70e-55 | 172 |
| MsG0580024363.01.T01 | AT1G64200 | 71.028 | 107 | 31 | 0 | 15 | 121 | 121 | 227 | 1.24e-50 | 161 |
| MsG0580024363.01.T01 | AT3G08560 | 62.281 | 114 | 41 | 1 | 15 | 126 | 115 | 228 | 3.29e-40 | 134 |
| MsG0580024363.01.T01 | AT1G64200 | 68.571 | 70 | 22 | 0 | 15 | 84 | 121 | 190 | 1.17e-27 | 101 |
Find 41 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCTGCTGTTAGCTTATC+TGG | 0.165355 | 5:+3892502 | MsG0580024363.01.T01:three_prime_UTR |
| GAAACTTGGAATTAAATATA+AGG | 0.282426 | 5:+3890526 | MsG0580024363.01.T01:CDS |
| CAGTAAATTATAAATATTAT+AGG | 0.314936 | 5:-3892323 | None:intergenic |
| GCACTTGGTAGAGGAAGTTT+TGG | 0.315846 | 5:+3890619 | MsG0580024363.01.T01:CDS |
| TATAAATATTATAGGTGAAA+TGG | 0.324357 | 5:-3892315 | None:intergenic |
| CAGCTCTGGAGGTGTGGTAT+TGG | 0.325702 | 5:+3891037 | MsG0580024363.01.T01:intron |
| ATCATGGGGATTGTGATGGC+TGG | 0.343640 | 5:-3890729 | None:intergenic |
| CAGATCCGCAAGCAGCTCTT+TGG | 0.350673 | 5:+3892257 | MsG0580024363.01.T01:intron |
| TGTGCTACTTACTTTGTGTA+TGG | 0.386432 | 5:+3890504 | MsG0580024363.01.T01:CDS |
| GTGGTGAAATAGCAAATCTT+TGG | 0.395969 | 5:+3892524 | MsG0580024363.01.T01:three_prime_UTR |
| AAATACACTTGATGCTCGTT+TGG | 0.406888 | 5:+3891088 | MsG0580024363.01.T01:CDS |
| TTACTTTGTGTATGGAAACT+TGG | 0.414900 | 5:+3890512 | MsG0580024363.01.T01:CDS |
| CCTCTTTCCGACACCTCAAT+AGG | 0.416620 | 5:-3890592 | None:intergenic |
| TCCTTATCAACAACGATCTC+TGG | 0.422603 | 5:-3890686 | None:intergenic |
| ACCAGAGATCGTTGTTGATA+AGG | 0.446783 | 5:+3890685 | MsG0580024363.01.T01:CDS |
| TGCTCAGGAGTATGCTGAAA+AGG | 0.449579 | 5:+3890649 | MsG0580024363.01.T01:CDS |
| TCATGGGGATTGTGATGGCT+GGG | 0.459295 | 5:-3890728 | None:intergenic |
| TTACATGTGGGAGTTTGTTA+CGG | 0.463593 | 5:-3891121 | None:intergenic |
| AACATTACCAGTGGAGATCA+TGG | 0.476950 | 5:-3890745 | None:intergenic |
| ATGGGGATTGTGATGGCTGG+GGG | 0.508306 | 5:-3890726 | None:intergenic |
| CCTATTGAGGTGTCGGAAAG+AGG | 0.513705 | 5:+3890592 | MsG0580024363.01.T01:CDS |
| TTGTTATTCTTCAGCTCTGG+AGG | 0.520387 | 5:+3891026 | MsG0580024363.01.T01:intron |
| AGAGGACCTGCACTTGGTAG+AGG | 0.521773 | 5:+3890610 | MsG0580024363.01.T01:CDS |
| CATGGGGATTGTGATGGCTG+GGG | 0.531144 | 5:-3890727 | None:intergenic |
| ATTCTTCAGCTCTGGAGGTG+TGG | 0.541669 | 5:+3891031 | MsG0580024363.01.T01:intron |
| ACATTACCAGTGGAGATCAT+GGG | 0.551646 | 5:-3890744 | None:intergenic |
| CTTCTGTCCTATTGAGGTGT+CGG | 0.557410 | 5:+3890585 | MsG0580024363.01.T01:CDS |
| AAGAACCTTCTGTCCTATTG+AGG | 0.558216 | 5:+3890579 | MsG0580024363.01.T01:CDS |
| AAACTTCCTCTACCAAGTGC+AGG | 0.570638 | 5:-3890616 | None:intergenic |
| CGACACCTCAATAGGACAGA+AGG | 0.579267 | 5:-3890584 | None:intergenic |
| ACAATCCCCATGATCTCCAC+TGG | 0.579484 | 5:+3890738 | MsG0580024363.01.T01:CDS |
| TACAATGTTTACAAGAGCAA+TGG | 0.581063 | 5:-3892377 | None:intergenic |
| TCGGAAAGAGGACCTGCACT+TGG | 0.588677 | 5:+3890604 | MsG0580024363.01.T01:CDS |
| TCTGCTGTTAGCTTATCTGG+TGG | 0.616601 | 5:+3892505 | MsG0580024363.01.T01:three_prime_UTR |
| CATTACCAGTGGAGATCATG+GGG | 0.626749 | 5:-3890743 | None:intergenic |
| GTGGTATTGGCTTCTCACGA+TGG | 0.629147 | 5:+3891050 | MsG0580024363.01.T01:CDS |
| GGAGATCATGGGGATTGTGA+TGG | 0.645556 | 5:-3890733 | None:intergenic |
| AAGTTGCTGTTTGAAGACCT+TGG | 0.656764 | 5:+3892282 | MsG0580024363.01.T01:exon |
| ACTGCAGAGATTGTTGTGAG+CGG | 0.656803 | 5:+3892342 | MsG0580024363.01.T01:three_prime_UTR |
| GAAATGGAACAATACAACCA+AGG | 0.691194 | 5:-3892299 | None:intergenic |
| CTTGTCCAAAGAGCTGCTTG+CGG | 0.716823 | 5:-3892262 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGTAAATTATAAATATTAT+AGG | - | Chr5:3892326-3892345 | None:intergenic | 10.0% |
| !!! | ATAGTGTTTTTTTTTTTTTT+TGG | + | Chr5:3891186-3891205 | MsG0580024363.01.T01:intron | 10.0% |
| !!! | TAGTGTTTTTTTTTTTTTTT+GGG | + | Chr5:3891187-3891206 | MsG0580024363.01.T01:intron | 10.0% |
| !!! | TTTTAGTAAAAAAAACTATT+TGG | + | Chr5:3892114-3892133 | MsG0580024363.01.T01:intron | 10.0% |
| !! | AAAAAATTAACAAACAAAAG+AGG | - | Chr5:3891722-3891741 | None:intergenic | 15.0% |
| !! | AAAAATTAACAAACAAAAGA+GGG | - | Chr5:3891721-3891740 | None:intergenic | 15.0% |
| !! | AAACAAATATCTAACATAAA+TGG | - | Chr5:3891223-3891242 | None:intergenic | 15.0% |
| !! | ATAACAAATAATACAATATC+AGG | - | Chr5:3891013-3891032 | None:intergenic | 15.0% |
| !! | TATAAATATTATAGGTGAAA+TGG | - | Chr5:3892318-3892337 | None:intergenic | 15.0% |
| !!! | GTTGTGATATTATATTTTTT+AGG | + | Chr5:3890910-3890929 | MsG0580024363.01.T01:intron | 15.0% |
| !! | AAAGTACAAGTTATAATCAA+CGG | - | Chr5:3891641-3891660 | None:intergenic | 20.0% |
| !! | ATTAAAACAATCCATTATAC+CGG | + | Chr5:3890802-3890821 | MsG0580024363.01.T01:intron | 20.0% |
| !! | CTTTCAATATTTGCAATATA+AGG | + | Chr5:3891602-3891621 | MsG0580024363.01.T01:intron | 20.0% |
| !! | GAAACTTGGAATTAAATATA+AGG | + | Chr5:3890526-3890545 | MsG0580024363.01.T01:CDS | 20.0% |
| !! | GACTATTTATTTACATAATC+TGG | + | Chr5:3891745-3891764 | MsG0580024363.01.T01:intron | 20.0% |
| !! | TACTAAAAATCACATTTGAA+GGG | - | Chr5:3892102-3892121 | None:intergenic | 20.0% |
| !! | TATAACAAAAACTTACATGT+GGG | - | Chr5:3891136-3891155 | None:intergenic | 20.0% |
| !! | TTAATCAAGAACAGTTATTT+AGG | - | Chr5:3890787-3890806 | None:intergenic | 20.0% |
| !! | TTACTAAAAATCACATTTGA+AGG | - | Chr5:3892103-3892122 | None:intergenic | 20.0% |
| !! | TTATAACAAAAACTTACATG+TGG | - | Chr5:3891137-3891156 | None:intergenic | 20.0% |
| !!! | TAAAACGTAGTTTTTATACT+AGG | + | Chr5:3892188-3892207 | MsG0580024363.01.T01:intron | 20.0% |
| ! | AAACACACTATATAAATACC+GGG | - | Chr5:3892042-3892061 | None:intergenic | 25.0% |
| ! | ACAAAAAATGAAGGAACTAA+AGG | - | Chr5:3892410-3892429 | None:intergenic | 25.0% |
| ! | CAAACACACTATATAAATAC+CGG | - | Chr5:3892043-3892062 | None:intergenic | 25.0% |
| ! | GGTATTTATATAGTGTGTTT+GGG | + | Chr5:3892042-3892061 | MsG0580024363.01.T01:intron | 25.0% |
| ! | TTTAAATGTAACATTACCAG+TGG | - | Chr5:3890757-3890776 | None:intergenic | 25.0% |
| !! | ATAGTTAGTTAACAGAGTTT+TGG | - | Chr5:3891479-3891498 | None:intergenic | 25.0% |
| !! | ATGTTTAAGATTTGAAACTC+AGG | - | Chr5:3890950-3890969 | None:intergenic | 25.0% |
| !! | TGTTTAAGATTTGAAACTCA+GGG | - | Chr5:3890949-3890968 | None:intergenic | 25.0% |
| !!! | ACTGTTTCTATAGTTGATTA+AGG | + | Chr5:3890981-3891000 | MsG0580024363.01.T01:intron | 25.0% |
| !!! | ATTAAGGTTTTGTGTTGAAT+AGG | + | Chr5:3891431-3891450 | MsG0580024363.01.T01:intron | 25.0% |
| !!! | CTTAACTTTTTTTTTCCCTT+GGG | + | Chr5:3891546-3891565 | MsG0580024363.01.T01:intron | 25.0% |
| !!! | TCTTAACTTTTTTTTTCCCT+TGG | + | Chr5:3891545-3891564 | MsG0580024363.01.T01:intron | 25.0% |
| !!! | TTAAGGTTTTGTGTTGAATA+GGG | + | Chr5:3891432-3891451 | MsG0580024363.01.T01:intron | 25.0% |
| AAAAGTTAAGAATGAAACGC+AGG | - | Chr5:3891536-3891555 | None:intergenic | 30.0% | |
| AATGAAATACTTGAGAGTTG+AGG | + | Chr5:3891329-3891348 | MsG0580024363.01.T01:intron | 30.0% | |
| AGGAAAAGACATGGATTTAT+GGG | + | Chr5:3891932-3891951 | MsG0580024363.01.T01:intron | 30.0% | |
| AGGAATTAGGAACTGTATAA+AGG | + | Chr5:3891390-3891409 | MsG0580024363.01.T01:intron | 30.0% | |
| ATAAATTAGCTGCATTGTAC+AGG | - | Chr5:3891963-3891982 | None:intergenic | 30.0% | |
| ATCAATTTCTGCATATGTGA+TGG | + | Chr5:3891873-3891892 | MsG0580024363.01.T01:intron | 30.0% | |
| CGGTATTTATATAGTGTGTT+TGG | + | Chr5:3892041-3892060 | MsG0580024363.01.T01:intron | 30.0% | |
| CTTACACAAATACTAAAACC+CGG | + | Chr5:3892021-3892040 | MsG0580024363.01.T01:intron | 30.0% | |
| GAATTAGGAACTGTATAAAG+GGG | + | Chr5:3891392-3891411 | MsG0580024363.01.T01:intron | 30.0% | |
| GGAATTAGGAACTGTATAAA+GGG | + | Chr5:3891391-3891410 | MsG0580024363.01.T01:intron | 30.0% | |
| TAAATTAGCTGCATTGTACA+GGG | - | Chr5:3891962-3891981 | None:intergenic | 30.0% | |
| TAATATTGAGAAATGAAGCG+CGG | - | Chr5:3891578-3891597 | None:intergenic | 30.0% | |
| TACAATGTTTACAAGAGCAA+TGG | - | Chr5:3892380-3892399 | None:intergenic | 30.0% | |
| TAGGAAAAGACATGGATTTA+TGG | + | Chr5:3891931-3891950 | MsG0580024363.01.T01:intron | 30.0% | |
| TATGACTTCTAATCAAACCA+AGG | - | Chr5:3892170-3892189 | None:intergenic | 30.0% | |
| TTAACAAACAAAAGAGGGAA+AGG | - | Chr5:3891716-3891735 | None:intergenic | 30.0% | |
| TTACTTTGTGTATGGAAACT+TGG | + | Chr5:3890512-3890531 | MsG0580024363.01.T01:CDS | 30.0% | |
| TTTGTGTTGAATAGGGTAAA+GGG | + | Chr5:3891439-3891458 | MsG0580024363.01.T01:intron | 30.0% | |
| ! | ATAAATTTTCCTCCAAACCT+TGG | + | Chr5:3892150-3892169 | MsG0580024363.01.T01:intron | 30.0% |
| ! | TCTAGATGATTTTTGATCGT+CGG | + | Chr5:3891831-3891850 | MsG0580024363.01.T01:intron | 30.0% |
| ! | TTTTGTGTTGAATAGGGTAA+AGG | + | Chr5:3891438-3891457 | MsG0580024363.01.T01:intron | 30.0% |
| !! | AACTTAGCGAAAACTTTTTC+TGG | + | Chr5:3892630-3892649 | MsG0580024363.01.T01:three_prime_UTR | 30.0% |
| !! | TATTTGTTATTCTTCAGCTC+TGG | + | Chr5:3891023-3891042 | MsG0580024363.01.T01:intron | 30.0% |
| !!! | GTATTTTACAGAGTTTGTTG+AGG | + | Chr5:3890552-3890571 | MsG0580024363.01.T01:CDS | 30.0% |
| AAATACACTTGATGCTCGTT+TGG | + | Chr5:3891088-3891107 | MsG0580024363.01.T01:CDS | 35.0% | |
| AATATTGAGAAATGAAGCGC+GGG | - | Chr5:3891577-3891596 | None:intergenic | 35.0% | |
| ATCCATTATACCGGATTTCT+AGG | + | Chr5:3890811-3890830 | MsG0580024363.01.T01:intron | 35.0% | |
| ATGAGCGACACAAAAAATGA+AGG | - | Chr5:3892419-3892438 | None:intergenic | 35.0% | |
| CTTCTAATCAAACCAAGGTT+TGG | - | Chr5:3892165-3892184 | None:intergenic | 35.0% | |
| GAAATGGAACAATACAACCA+AGG | - | Chr5:3892302-3892321 | None:intergenic | 35.0% | |
| GGAAAAGACATGGATTTATG+GGG | + | Chr5:3891933-3891952 | MsG0580024363.01.T01:intron | 35.0% | |
| GTGGTGAAATAGCAAATCTT+TGG | + | Chr5:3892524-3892543 | MsG0580024363.01.T01:three_prime_UTR | 35.0% | |
| TACCTAGAAATCCGGTATAA+TGG | - | Chr5:3890816-3890835 | None:intergenic | 35.0% | |
| TGAGAGTTTAGGAAAAGACA+TGG | + | Chr5:3891923-3891942 | MsG0580024363.01.T01:intron | 35.0% | |
| ! | ATTATACCGGATTTCTAGGT+AGG | + | Chr5:3890815-3890834 | MsG0580024363.01.T01:intron | 35.0% |
| ! | ATTTCTGCTGTTAGCTTATC+TGG | + | Chr5:3892502-3892521 | MsG0580024363.01.T01:three_prime_UTR | 35.0% |
| ! | CATGCACTTCGAATATTTTC+AGG | - | Chr5:3891997-3892016 | None:intergenic | 35.0% |
| ! | TTATACCGGATTTCTAGGTA+GGG | + | Chr5:3890816-3890835 | MsG0580024363.01.T01:intron | 35.0% |
| !! | TGTGCTACTTACTTTGTGTA+TGG | + | Chr5:3890504-3890523 | MsG0580024363.01.T01:CDS | 35.0% |
| !! | TTACATGTGGGAGTTTGTTA+CGG | - | Chr5:3891124-3891143 | None:intergenic | 35.0% |
| AACATTACCAGTGGAGATCA+TGG | - | Chr5:3890748-3890767 | None:intergenic | 40.0% | |
| AACTGTATAAAGGGGCAGAA+CGG | + | Chr5:3891400-3891419 | MsG0580024363.01.T01:intron | 40.0% | |
| AAGAACCTTCTGTCCTATTG+AGG | + | Chr5:3890579-3890598 | MsG0580024363.01.T01:CDS | 40.0% | |
| ACAAAAGAGGGAAAGGAAGT+TGG | - | Chr5:3891709-3891728 | None:intergenic | 40.0% | |
| ACATTACCAGTGGAGATCAT+GGG | - | Chr5:3890747-3890766 | None:intergenic | 40.0% | |
| ACCAGAGATCGTTGTTGATA+AGG | + | Chr5:3890685-3890704 | MsG0580024363.01.T01:CDS | 40.0% | |
| AGGTCAATTATGCACTGTGA+GGG | + | Chr5:3891349-3891368 | MsG0580024363.01.T01:intron | 40.0% | |
| CAAAAGAGGGAAAGGAAGTT+GGG | - | Chr5:3891708-3891727 | None:intergenic | 40.0% | |
| CAATTCCCTACCTAGAAATC+CGG | - | Chr5:3890824-3890843 | None:intergenic | 40.0% | |
| CTAATCAAACCAAGGTTTGG+AGG | - | Chr5:3892162-3892181 | None:intergenic | 40.0% | |
| TCCTTATCAACAACGATCTC+TGG | - | Chr5:3890689-3890708 | None:intergenic | 40.0% | |
| TTGGGCATGTAACAGGAATT+AGG | + | Chr5:3891377-3891396 | MsG0580024363.01.T01:intron | 40.0% | |
| ! | CAGAACGGACTTAAGGATTA+AGG | + | Chr5:3891415-3891434 | MsG0580024363.01.T01:intron | 40.0% |
| ! | TGTGTTTGGGTTCACAATAG+AGG | + | Chr5:3892055-3892074 | MsG0580024363.01.T01:intron | 40.0% |
| ! | TTGTTATTCTTCAGCTCTGG+AGG | + | Chr5:3891026-3891045 | MsG0580024363.01.T01:intron | 40.0% |
| !! | AAGTTGCTGTTTGAAGACCT+TGG | + | Chr5:3892282-3892301 | MsG0580024363.01.T01:exon | 40.0% |
| !! | TGTCTAGCTCTGTTAGTCAA+GGG | + | Chr5:3890853-3890872 | MsG0580024363.01.T01:intron | 40.0% |
| AAACTTCCTCTACCAAGTGC+AGG | - | Chr5:3890619-3890638 | None:intergenic | 45.0% | |
| ACTGCAGAGATTGTTGTGAG+CGG | + | Chr5:3892342-3892361 | MsG0580024363.01.T01:three_prime_UTR | 45.0% | |
| ATGCATTGTGCAAGTGGTTC+GGG | + | Chr5:3891896-3891915 | MsG0580024363.01.T01:intron | 45.0% | |
| CATTACCAGTGGAGATCATG+GGG | - | Chr5:3890746-3890765 | None:intergenic | 45.0% | |
| CTTCTGTCCTATTGAGGTGT+CGG | + | Chr5:3890585-3890604 | MsG0580024363.01.T01:CDS | 45.0% | |
| GAAGTTGGGCAGTAATGCTA+AGG | - | Chr5:3891694-3891713 | None:intergenic | 45.0% | |
| GAGGTCAATTATGCACTGTG+AGG | + | Chr5:3891348-3891367 | MsG0580024363.01.T01:intron | 45.0% | |
| GATGCATTGTGCAAGTGGTT+CGG | + | Chr5:3891895-3891914 | MsG0580024363.01.T01:intron | 45.0% | |
| GCTAGAAGCAATCTGAGCAA+TGG | - | Chr5:3891505-3891524 | None:intergenic | 45.0% | |
| TCTCTCGGGTCTAACTTGAT+TGG | + | Chr5:3890888-3890907 | MsG0580024363.01.T01:intron | 45.0% | |
| TTGGGCAGTAATGCTAAGGT+GGG | - | Chr5:3891690-3891709 | None:intergenic | 45.0% | |
| ! | GCACTTGGTAGAGGAAGTTT+TGG | + | Chr5:3890619-3890638 | MsG0580024363.01.T01:CDS | 45.0% |
| ! | TCTGCTGTTAGCTTATCTGG+TGG | + | Chr5:3892505-3892524 | MsG0580024363.01.T01:three_prime_UTR | 45.0% |
| ! | TGATGGATGCATTGTGCAAG+TGG | + | Chr5:3891890-3891909 | MsG0580024363.01.T01:intron | 45.0% |
| ! | TGCTCAGGAGTATGCTGAAA+AGG | + | Chr5:3890649-3890668 | MsG0580024363.01.T01:CDS | 45.0% |
| !! | AGGTGGGGGAGTATCTATTT+AGG | - | Chr5:3891674-3891693 | None:intergenic | 45.0% |
| !! | CGACAGATGACGCTCTAAAA+AGG | - | Chr5:3891773-3891792 | None:intergenic | 45.0% |
| !! | GGGGGAGTATCTATTTAGGA+AGG | - | Chr5:3891670-3891689 | None:intergenic | 45.0% |
| !! | GTGTCTAGCTCTGTTAGTCA+AGG | + | Chr5:3890852-3890871 | MsG0580024363.01.T01:intron | 45.0% |
| !!! | AGTTTTGGATTCAGCTGCTC+AGG | + | Chr5:3890634-3890653 | MsG0580024363.01.T01:CDS | 45.0% |
| !!! | TTTTAGAGCGTCATCTGTCG+CGG | + | Chr5:3891773-3891792 | MsG0580024363.01.T01:intron | 45.0% |
| ACAATCCCCATGATCTCCAC+TGG | + | Chr5:3890738-3890757 | MsG0580024363.01.T01:CDS | 50.0% | |
| ATCATGGGGATTGTGATGGC+TGG | - | Chr5:3890732-3890751 | None:intergenic | 50.0% | |
| ATGCACTGTGAGGGACAACT+TGG | + | Chr5:3891358-3891377 | MsG0580024363.01.T01:intron | 50.0% | |
| CCTCTTTCCGACACCTCAAT+AGG | - | Chr5:3890595-3890614 | None:intergenic | 50.0% | |
| CGACACCTCAATAGGACAGA+AGG | - | Chr5:3890587-3890606 | None:intergenic | 50.0% | |
| CTTGTCCAAAGAGCTGCTTG+CGG | - | Chr5:3892265-3892284 | None:intergenic | 50.0% | |
| GCTCAGATTGCTTCTAGCAC+TGG | + | Chr5:3891507-3891526 | MsG0580024363.01.T01:intron | 50.0% | |
| GGACAACTTGGGCATGTAAC+AGG | + | Chr5:3891370-3891389 | MsG0580024363.01.T01:intron | 50.0% | |
| GGAGATCATGGGGATTGTGA+TGG | - | Chr5:3890736-3890755 | None:intergenic | 50.0% | |
| GTTGGGCAGTAATGCTAAGG+TGG | - | Chr5:3891691-3891710 | None:intergenic | 50.0% | |
| TCATGGGGATTGTGATGGCT+GGG | - | Chr5:3890731-3890750 | None:intergenic | 50.0% | |
| TGCACTGTGAGGGACAACTT+GGG | + | Chr5:3891359-3891378 | MsG0580024363.01.T01:intron | 50.0% | |
| TGGGCAGTAATGCTAAGGTG+GGG | - | Chr5:3891689-3891708 | None:intergenic | 50.0% | |
| ! | AAAGGGGCAGAACGGACTTA+AGG | + | Chr5:3891408-3891427 | MsG0580024363.01.T01:intron | 50.0% |
| ! | ATTGTGCAAGTGGTTCGGGT+GGG | + | Chr5:3891900-3891919 | MsG0580024363.01.T01:intron | 50.0% |
| !! | ATTCTTCAGCTCTGGAGGTG+TGG | + | Chr5:3891031-3891050 | MsG0580024363.01.T01:intron | 50.0% |
| !! | CCTATTGAGGTGTCGGAAAG+AGG | + | Chr5:3890592-3890611 | MsG0580024363.01.T01:CDS | 50.0% |
| !! | GGCTTGCATCTAGTTCTCTC+GGG | + | Chr5:3890874-3890893 | MsG0580024363.01.T01:intron | 50.0% |
| !! | GGGCTTGCATCTAGTTCTCT+CGG | + | Chr5:3890873-3890892 | MsG0580024363.01.T01:intron | 50.0% |
| !! | GTGGTATTGGCTTCTCACGA+TGG | + | Chr5:3891050-3891069 | MsG0580024363.01.T01:CDS | 50.0% |
| AGAGGACCTGCACTTGGTAG+AGG | + | Chr5:3890610-3890629 | MsG0580024363.01.T01:CDS | 55.0% | |
| ATGGGGATTGTGATGGCTGG+GGG | - | Chr5:3890729-3890748 | None:intergenic | 55.0% | |
| CAGATCCGCAAGCAGCTCTT+TGG | + | Chr5:3892257-3892276 | MsG0580024363.01.T01:intron | 55.0% | |
| CATGGGGATTGTGATGGCTG+GGG | - | Chr5:3890730-3890749 | None:intergenic | 55.0% | |
| GGGCAGTAATGCTAAGGTGG+GGG | - | Chr5:3891688-3891707 | None:intergenic | 55.0% | |
| GTTCGGGTGGGTGAGAGTTT+AGG | + | Chr5:3891912-3891931 | MsG0580024363.01.T01:intron | 55.0% | |
| TCGGAAAGAGGACCTGCACT+TGG | + | Chr5:3890604-3890623 | MsG0580024363.01.T01:CDS | 55.0% | |
| ! | CATTGTGCAAGTGGTTCGGG+TGG | + | Chr5:3891899-3891918 | MsG0580024363.01.T01:intron | 55.0% |
| !! | CAGCTCTGGAGGTGTGGTAT+TGG | + | Chr5:3891037-3891056 | MsG0580024363.01.T01:intron | 55.0% |
| GAAGCGCGGGTACTACCCAA+GGG | - | Chr5:3891564-3891583 | None:intergenic | 60.0% | |
| TGAAGCGCGGGTACTACCCA+AGG | - | Chr5:3891565-3891584 | None:intergenic | 60.0% | |
| ! | TAGAGCGTCATCTGTCGCGG+TGG | + | Chr5:3891776-3891795 | MsG0580024363.01.T01:intron | 60.0% |
| GGATTGTGATGGCTGGGGGC+AGG | - | Chr5:3890725-3890744 | None:intergenic | 65.0% | |
| TTGTGATGGCTGGGGGCAGG+TGG | - | Chr5:3890722-3890741 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 3890503 | 3892677 | 3890503 | ID=MsG0580024363.01;Name=MsG0580024363.01 |
| Chr5 | mRNA | 3890503 | 3892677 | 3890503 | ID=MsG0580024363.01.T01;Parent=MsG0580024363.01;Name=MsG0580024363.01.T01;_AED=0.43;_eAED=0.45;_QI=0|1|0.66|1|1|1|3|382|130 |
| Chr5 | exon | 3890503 | 3890759 | 3890503 | ID=MsG0580024363.01.T01:exon:1241;Parent=MsG0580024363.01.T01 |
| Chr5 | exon | 3891040 | 3891139 | 3891040 | ID=MsG0580024363.01.T01:exon:1242;Parent=MsG0580024363.01.T01 |
| Chr5 | exon | 3892260 | 3892677 | 3892260 | ID=MsG0580024363.01.T01:exon:1243;Parent=MsG0580024363.01.T01 |
| Chr5 | CDS | 3890503 | 3890759 | 3890503 | ID=MsG0580024363.01.T01:cds;Parent=MsG0580024363.01.T01 |
| Chr5 | CDS | 3891040 | 3891139 | 3891040 | ID=MsG0580024363.01.T01:cds;Parent=MsG0580024363.01.T01 |
| Chr5 | CDS | 3892260 | 3892295 | 3892260 | ID=MsG0580024363.01.T01:cds;Parent=MsG0580024363.01.T01 |
| Chr5 | three_prime_UTR | 3892296 | 3892677 | 3892296 | ID=MsG0580024363.01.T01:three_prime_utr;Parent=MsG0580024363.01.T01 |
| Gene Sequence |
| Protein sequence |
