AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017625.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017625.01.T01 MTR_3g109950 87.473 471 9 3 1 422 1 470 0.0 793
MsG0380017625.01.T01 MTR_3g109950 86.937 444 8 3 1 395 1 443 0.0 736
MsG0380017625.01.T01 MTR_3g109950 85.354 396 8 3 1 347 1 395 0.0 606
MsG0380017625.01.T01 MTR_5g019950 56.427 459 141 5 11 418 18 468 3.11e-150 434
MsG0380017625.01.T01 MTR_8g077830 56.881 436 132 5 41 422 36 469 1.31e-148 431
MsG0380017625.01.T01 MTR_8g088080 58.010 412 116 4 67 421 65 476 3.99e-131 386
MsG0380017625.01.T01 MTR_8g088070 56.311 412 121 4 67 420 60 470 2.45e-129 381
MsG0380017625.01.T01 MTR_1g026910 48.195 471 170 6 6 418 1 455 3.66e-127 375
MsG0380017625.01.T01 MTR_1g026910 47.545 448 161 6 6 395 1 432 2.18e-114 342
MsG0380017625.01.T01 MTR_7g103300 47.575 433 166 6 44 418 30 459 4.72e-103 314
MsG0380017625.01.T01 MTR_7g103300 48.515 404 150 5 73 418 8 411 3.27e-99 302
MsG0380017625.01.T01 MTR_7g103300 47.017 419 161 6 44 404 30 445 2.46e-94 291
MsG0380017625.01.T01 MTR_7g103300 46.883 369 138 5 108 418 1 369 8.72e-90 276
MsG0380017625.01.T01 MTR_7g103300 46.049 367 137 6 44 352 30 393 5.31e-76 242
MsG0380017625.01.T01 MTR_7g103300 43.544 333 127 6 44 318 30 359 8.18e-57 191
MsG0380017625.01.T01 MTR_1g061710 42.949 312 118 5 64 315 48 359 1.06e-50 179
MsG0380017625.01.T01 MTR_1g061710 55.882 102 45 0 317 418 427 528 1.78e-28 117
MsG0380017625.01.T01 MTR_5g019970 72.816 103 28 0 316 418 6 108 7.57e-40 138
MsG0380017625.01.T01 MTR_3g110012 72.269 119 11 1 253 349 27 145 2.73e-39 138
MsG0380017625.01.T01 MTR_3g109980 72.269 119 11 1 253 349 27 145 2.73e-39 138
MsG0380017625.01.T01 MTR_2g010740 26.702 382 210 8 105 418 87 466 2.40e-32 127
MsG0380017625.01.T01 MTR_2g010740 25.260 289 146 8 105 325 87 373 9.31e-17 81.6
MsG0380017625.01.T01 MTR_3g110018 64.000 50 15 1 196 242 29 78 1.82e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017625.01.T01 AT2G25737 66.596 470 98 4 6 421 11 475 0.0 552
MsG0380017625.01.T01 AT2G25737 61.202 366 83 4 6 317 11 371 3.02e-131 382
MsG0380017625.01.T01 AT2G36630 44.762 420 164 6 62 418 42 456 2.50e-94 291
MsG0380017625.01.T01 AT1G11540 29.144 374 204 7 104 418 79 450 9.09e-33 129
MsG0380017625.01.T01 AT1G11540 29.268 369 200 7 109 418 1 367 1.60e-32 126
MsG0380017625.01.T01 AT1G61740 27.073 410 234 7 72 418 51 458 2.21e-32 127
MsG0380017625.01.T01 AT4G21250 28.501 407 222 8 73 418 51 449 6.13e-24 103
MsG0380017625.01.T01 AT4G21260 25.234 428 232 14 6 399 1 374 3.31e-21 95.1

Find 129 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGCTGTTGATTTCTTA+TGG 0.163433 3:+98702757 MsG0380017625.01.T01:CDS
CCTATGCTCAGTCTTATTAT+TGG 0.208963 3:+98703134 MsG0380017625.01.T01:CDS
GATTGCCGATCATGAATATA+TGG 0.212904 3:+98706208 MsG0380017625.01.T01:CDS
AATAAAAGAACACAATAATT+TGG 0.213975 3:-98702291 None:intergenic
AATGTATATTGGAAGGAGTT+TGG 0.234623 3:+98705169 MsG0380017625.01.T01:CDS
CTACTTGCTGAAACGATTTC+CGG 0.245240 3:+98705898 MsG0380017625.01.T01:CDS
GAGATAGCAGTCGATGATTT+AGG 0.245570 3:-98703164 None:intergenic
CACATGCATCTTAATCTAAA+TGG 0.262348 3:-98706440 None:intergenic
CGGTATAATCGGTGGATTGC+TGG 0.273239 3:+98705662 MsG0380017625.01.T01:CDS
TGAAAATGAGATCCATATTA+TGG 0.284097 3:+98702610 MsG0380017625.01.T01:CDS
TGGAGTTGGCATTTCAAATA+TGG 0.298396 3:+98706178 MsG0380017625.01.T01:CDS
ATGTTGCAGGAAATGGAATT+TGG 0.302608 3:+98703023 MsG0380017625.01.T01:intron
AGAAGGCTGATCATCCTATT+TGG 0.303986 3:+98706092 MsG0380017625.01.T01:CDS
TAGCAACATCATCCATAATA+TGG 0.305835 3:-98702622 None:intergenic
ACTAGGAGGCGGATTTGTTA+TGG 0.306710 3:+98705686 MsG0380017625.01.T01:CDS
GTATTAGTAACATTAAAATT+TGG 0.315047 3:-98702702 None:intergenic
AAACGATTTCCGGTTCCTTA+TGG 0.322506 3:+98705908 MsG0380017625.01.T01:CDS
TTTATCAGTGCAATCTCATT+AGG 0.334595 3:+98706155 MsG0380017625.01.T01:CDS
ATGTATATTGGAAGGAGTTT+GGG 0.350245 3:+98705170 MsG0380017625.01.T01:CDS
TCAACGTTGTATTTCCTGAT+TGG 0.361915 3:+98704404 MsG0380017625.01.T01:CDS
TTATTTCTTATCCTGTTAGA+AGG 0.367256 3:+98706335 MsG0380017625.01.T01:three_prime_UTR
GCAGTTACCCCAACTGCAAT+TGG 0.371672 3:-98705525 None:intergenic
CTATAATTGAAAATGTATAT+TGG 0.377259 3:+98705158 MsG0380017625.01.T01:CDS
CTAGTCATCTATTGTGTGTT+TGG 0.378183 3:+98705630 MsG0380017625.01.T01:CDS
GGTGGCTACTATTGCAGCCT+TGG 0.391624 3:+98706052 MsG0380017625.01.T01:CDS
CTCATCATCTTTATTCTAGC+TGG 0.396070 3:+98706125 MsG0380017625.01.T01:CDS
ATGAAAATTTGACAATAATC+CGG 0.404677 3:+98706489 MsG0380017625.01.T01:three_prime_UTR
CTATTGTGTGTTTGGTGTGC+TGG 0.405285 3:+98705638 MsG0380017625.01.T01:CDS
CTAGGAGGCGGATTTGTTAT+GGG 0.410693 3:+98705687 MsG0380017625.01.T01:CDS
GAATATAAAGCTCTTCCAAC+TGG 0.413552 3:+98704914 MsG0380017625.01.T01:CDS
AATATAGTGACAAGCCAATC+AGG 0.423808 3:-98704418 None:intergenic
TGGATGATGTTGCTATTGTT+TGG 0.424677 3:+98702630 MsG0380017625.01.T01:CDS
TGCAGATCCCAATTGCAGTT+GGG 0.427147 3:+98705517 MsG0380017625.01.T01:intron
TATTCTTCCACAGAAAATAA+AGG 0.430432 3:-98702430 None:intergenic
GCCAACTTAGCTCTTGGCCT+CGG 0.430451 3:-98706303 None:intergenic
TGAGAGATGCTCTTCCAAAT+AGG 0.430670 3:-98706106 None:intergenic
GTTGGAGGTGTAGGTGGTGG+TGG 0.435918 3:+98703101 MsG0380017625.01.T01:CDS
GGTGTGCTGGCCGGTATAAT+CGG 0.438441 3:+98705651 MsG0380017625.01.T01:CDS
GTTCGGTGAAGAAGAAAATT+CGG 0.442286 3:-98702491 None:intergenic
GCTACTATTGCAGCCTTGGT+TGG 0.446086 3:+98706056 MsG0380017625.01.T01:CDS
CTTCACGACGTTGGCGTGAA+GGG 0.452707 3:-98702388 None:intergenic
TGCATAAGTAGCCGAGTAAA+CGG 0.452785 3:+98702199 MsG0380017625.01.T01:five_prime_UTR
GCTAAATCATAGTCAATGAT+TGG 0.453065 3:-98704331 None:intergenic
GTTTGTTTCAGGTATGATCA+TGG 0.467366 3:+98704249 MsG0380017625.01.T01:intron
AAATGAAAATTGAGATTGAA+AGG 0.468829 3:-98702337 None:intergenic
ATTATTGGCAATGTACAAAC+CGG 0.472551 3:-98706508 None:intergenic
TAATTTGGTTTGCAAAATGA+AGG 0.474766 3:-98702276 None:intergenic
ACCGAACAGAACACGAGTCT+TGG 0.476954 3:+98702507 MsG0380017625.01.T01:five_prime_UTR
CACAGCTCTTTACTTGAGCC+TGG 0.479609 3:+98706031 MsG0380017625.01.T01:intron
GGAAGTGTTGGAGGTGTAGG+TGG 0.480918 3:+98703095 MsG0380017625.01.T01:CDS
TTTGGAAGTGTTGGAGGTGT+AGG 0.483068 3:+98703092 MsG0380017625.01.T01:CDS
TTATGGAAATCAGATGGATC+GGG 0.484509 3:+98702774 MsG0380017625.01.T01:CDS
GAGGCAACTGCATTGTTCAC+AGG 0.489298 3:+98705552 MsG0380017625.01.T01:CDS
TATTCAGAGTTCCGTTTACT+CGG 0.493138 3:-98702210 None:intergenic
ACCGAGGCCAAGAGCTAAGT+TGG 0.495274 3:+98706302 MsG0380017625.01.T01:three_prime_UTR
ATCACGGCCAACTTAGCTCT+TGG 0.504666 3:-98706309 None:intergenic
TCTTCACGACGTTGGCGTGA+AGG 0.504828 3:-98702389 None:intergenic
CTTATGGAAATCAGATGGAT+CGG 0.504898 3:+98702773 MsG0380017625.01.T01:CDS
GGTATAATCGGTGGATTGCT+GGG 0.505907 3:+98705663 MsG0380017625.01.T01:CDS
AGTGTTGGAGGTGTAGGTGG+TGG 0.506773 3:+98703098 MsG0380017625.01.T01:CDS
ACCAAGACTCGTGTTCTGTT+CGG 0.506802 3:-98702508 None:intergenic
ACCAAATGTTGCCATTGAAA+AGG 0.507227 3:+98704937 MsG0380017625.01.T01:CDS
ATAGCTTCTACTGGTGATCA+AGG 0.508677 3:+98705585 MsG0380017625.01.T01:CDS
CTCATGCTTGGTATCAGCAT+TGG 0.509084 3:+98704373 MsG0380017625.01.T01:CDS
GATTTCTTATGGAAATCAGA+TGG 0.512178 3:+98702768 MsG0380017625.01.T01:CDS
CAGTTACCCCAACTGCAATT+GGG 0.512495 3:-98705524 None:intergenic
ATTGCCGATCATGAATATAT+GGG 0.513117 3:+98706209 MsG0380017625.01.T01:CDS
ATGCAGATCCCAATTGCAGT+TGG 0.515311 3:+98705516 MsG0380017625.01.T01:intron
TCCACAGAAAATAAAGGAGC+AGG 0.515636 3:-98702424 None:intergenic
GGAGCTGCGTTTGGAAGTGT+TGG 0.516172 3:+98703083 MsG0380017625.01.T01:CDS
GCAATCTCATTAGGTGGAGT+TGG 0.517080 3:+98706164 MsG0380017625.01.T01:CDS
ATGGCAACATTTGGTCCAGT+TGG 0.520257 3:-98704929 None:intergenic
TTGGGCTACTAGCATTTGTG+TGG 0.522271 3:+98705188 MsG0380017625.01.T01:CDS
TTTGTTTCAGGTATGATCAT+GGG 0.526377 3:+98704250 MsG0380017625.01.T01:intron
CGGAACGAACCATAAGGAAC+CGG 0.527270 3:-98705917 None:intergenic
CAGCAATCCACCGATTATAC+CGG 0.529187 3:-98705661 None:intergenic
TTTGGATGGCAAATTGTGTT+GGG 0.529517 3:+98703041 MsG0380017625.01.T01:CDS
AATGAAAATTGAGATTGAAA+GGG 0.530652 3:-98702336 None:intergenic
GGGTTATCAACACGTGTGGC+CGG 0.530852 3:+98702794 MsG0380017625.01.T01:CDS
TTTGAGAATATCTGCAAGTA+CGG 0.532267 3:+98706233 MsG0380017625.01.T01:CDS
AGGTAGGATGTCTCAGCCTA+AGG 0.536545 3:-98704300 None:intergenic
GATTGAAAGGGAAGAAATGA+TGG 0.537920 3:-98702324 None:intergenic
ATTTGGATGGCAAATTGTGT+TGG 0.540126 3:+98703040 MsG0380017625.01.T01:CDS
TGTGTGTTTGGTGTGCTGGC+CGG 0.542939 3:+98705642 MsG0380017625.01.T01:CDS
TAATAATTTCTTCACGACGT+TGG 0.544698 3:-98702397 None:intergenic
AGAAGAGTGATAGCTTCTAC+TGG 0.546881 3:+98705576 MsG0380017625.01.T01:CDS
AATTGAAAATGTATATTGGA+AGG 0.548451 3:+98705162 MsG0380017625.01.T01:CDS
TACGGAATCACTCCATCACT+TGG 0.549675 3:-98706376 None:intergenic
GGATTGCTGGGACTAGGAGG+CGG 0.552188 3:+98705675 MsG0380017625.01.T01:CDS
CACAATATGTTGTCCAACCA+AGG 0.555321 3:-98706069 None:intergenic
ATAAGTTTCTGAGTTTCCTA+CGG 0.556116 3:-98706394 None:intergenic
GGAGAATGTCATTGCGAAAG+TGG 0.557248 3:-98705852 None:intergenic
CTCCTCGTCTATGTCTGTTG+TGG 0.560055 3:+98705871 MsG0380017625.01.T01:CDS
GCAGATCCCAATTGCAGTTG+GGG 0.562723 3:+98705518 MsG0380017625.01.T01:intron
CAAGGGAAAGCATTTACAGT+TGG 0.564981 3:+98705603 MsG0380017625.01.T01:CDS
ATTCAACCTATGCTCATGCT+TGG 0.566741 3:+98704361 MsG0380017625.01.T01:CDS
GTTTGAAACTTACTTGAGGA+GGG 0.568900 3:-98705734 None:intergenic
CAACTGTCTACTACAACCTT+AGG 0.569715 3:+98704284 MsG0380017625.01.T01:CDS
ATCGGTGGATTGCTGGGACT+AGG 0.570311 3:+98705669 MsG0380017625.01.T01:CDS
AAATCCCATATATTCATGAT+CGG 0.571395 3:-98706213 None:intergenic
ACACACAATAGATGACTAGC+TGG 0.573367 3:-98705626 None:intergenic
GCTGCGTTTGGAAGTGTTGG+AGG 0.574281 3:+98703086 MsG0380017625.01.T01:CDS
ATCAGTGCAATCTCATTAGG+TGG 0.579952 3:+98706158 MsG0380017625.01.T01:CDS
AGGCAACTGCATTGTTCACA+GGG 0.582240 3:+98705553 MsG0380017625.01.T01:CDS
AGTTTGAAACTTACTTGAGG+AGG 0.587517 3:-98705735 None:intergenic
GTCAATGATTGGCATATCCA+AGG 0.593318 3:-98704320 None:intergenic
CCTTGCACTACAGATTGCCA+AGG 0.596899 3:+98705219 MsG0380017625.01.T01:CDS
TGTCATTGCGAAAGTGGCTG+TGG 0.598176 3:-98705846 None:intergenic
CCTTGGCAATCTGTAGTGCA+AGG 0.598586 3:-98705219 None:intergenic
GGTGGATTGCTGGGACTAGG+AGG 0.603818 3:+98705672 MsG0380017625.01.T01:CDS
GTGAAGAAGAAAATTCGGAC+AGG 0.607564 3:-98702486 None:intergenic
GGATAAGAAATAATCTATCA+CGG 0.610267 3:-98706325 None:intergenic
ATGATTGGCATATCCAAGGT+AGG 0.612586 3:-98704316 None:intergenic
TGCAGGAAATGGAATTTGGA+TGG 0.618179 3:+98703027 MsG0380017625.01.T01:intron
CTGATACCAAGCATGAGCAT+AGG 0.621971 3:-98704367 None:intergenic
TATTCAAAAGCTGCGAACCG+AGG 0.622984 3:+98706286 MsG0380017625.01.T01:three_prime_UTR
TAGGCTGAGACATCCTACCT+TGG 0.634297 3:+98704303 MsG0380017625.01.T01:CDS
AGGCTGCAATAGTAGCCACC+AGG 0.634890 3:-98706049 None:intergenic
AGTTGGGGTAACTGCGTACG+AGG 0.636664 3:+98705533 MsG0380017625.01.T01:CDS
CCAATAATAAGACTGAGCAT+AGG 0.644853 3:-98703134 None:intergenic
TAGCTTCTACTGGTGATCAA+GGG 0.646261 3:+98705586 MsG0380017625.01.T01:CDS
TTGGACAACATATTGTGAGA+AGG 0.670015 3:+98706075 MsG0380017625.01.T01:CDS
GATCGGGTTATCAACACGTG+TGG 0.675635 3:+98702790 MsG0380017625.01.T01:CDS
GTGCTGGCCGGTATAATCGG+TGG 0.677338 3:+98705654 MsG0380017625.01.T01:CDS
AAGTGATGGAGTGATTCCGT+AGG 0.682504 3:+98706378 MsG0380017625.01.T01:three_prime_UTR
AGCTCTTTACTTGAGCCTGG+TGG 0.686286 3:+98706034 MsG0380017625.01.T01:intron
TGCCATTGAAAAGGAAAACG+AGG 0.701492 3:+98704946 MsG0380017625.01.T01:CDS
TTCCACAACAGACATAGACG+AGG 0.749880 3:-98705873 None:intergenic
GGAACTCTGAATATCACACG+CGG 0.790116 3:+98702220 MsG0380017625.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATATTAATA+TGG + Chr3:98703833-98703852 MsG0380017625.01.T01:intron 0.0%
!! TTTATAATAATTTAAAAAAA+AGG + Chr3:98703665-98703684 MsG0380017625.01.T01:intron 0.0%
!!! ATAATAATATTTTATTAAAA+TGG + Chr3:98703692-98703711 MsG0380017625.01.T01:intron 0.0%
!! AAAAAATATTAATATGGTAA+AGG + Chr3:98703839-98703858 MsG0380017625.01.T01:intron 10.0%
!! TACCAAATTATTATTAAATA+TGG - Chr3:98705008-98705027 None:intergenic 10.0%
!! TTCCATATTTAATAATAATT+TGG + Chr3:98705003-98705022 MsG0380017625.01.T01:intron 10.0%
!! AAAAGATAAATAGTAGTATT+TGG + Chr3:98702885-98702904 MsG0380017625.01.T01:intron 15.0%
!! AAATAATTATCTGAAAGTAA+CGG - Chr3:98703328-98703347 None:intergenic 15.0%
!! AATAAAAGAACACAATAATT+TGG - Chr3:98702294-98702313 None:intergenic 15.0%
!! AATTGAATTATCTAAGAAAA+TGG - Chr3:98703972-98703991 None:intergenic 15.0%
!! AATTGTTTACTAAATGATAA+GGG - Chr3:98703641-98703660 None:intergenic 15.0%
!! ATTAATTGAAAGTTATAAAC+TGG - Chr3:98705279-98705298 None:intergenic 15.0%
!! CTATAATTGAAAATGTATAT+TGG + Chr3:98705158-98705177 MsG0380017625.01.T01:CDS 15.0%
!! GTATTAGTAACATTAAAATT+TGG - Chr3:98702705-98702724 None:intergenic 15.0%
!! TAATTGTTTACTAAATGATA+AGG - Chr3:98703642-98703661 None:intergenic 15.0%
!! TTCAAAAGAGATATTATAAT+GGG + Chr3:98703604-98703623 MsG0380017625.01.T01:intron 15.0%
!! TTTCAAAAGAGATATTATAA+TGG + Chr3:98703603-98703622 MsG0380017625.01.T01:intron 15.0%
!!! AATTTTTTTTACTCTTATGT+AGG + Chr3:98704538-98704557 MsG0380017625.01.T01:intron 15.0%
!!! ATTTTCTTAGATAATTCAAT+TGG + Chr3:98703971-98703990 MsG0380017625.01.T01:intron 15.0%
!!! CTTTTTATAATATTCAGTTT+TGG + Chr3:98705964-98705983 MsG0380017625.01.T01:intron 15.0%
!! AAACATTTATTTGTTCACAA+TGG - Chr3:98704678-98704697 None:intergenic 20.0%
!! AAATGAAAATTGAGATTGAA+AGG - Chr3:98702340-98702359 None:intergenic 20.0%
!! AATGAAAATTGAGATTGAAA+GGG - Chr3:98702339-98702358 None:intergenic 20.0%
!! AATTCAAAGAACAAAAAACA+TGG + Chr3:98702581-98702600 MsG0380017625.01.T01:exon 20.0%
!! AATTGAAAATGTATATTGGA+AGG + Chr3:98705162-98705181 MsG0380017625.01.T01:CDS 20.0%
!! ATGAAAATTTGACAATAATC+CGG + Chr3:98706489-98706508 MsG0380017625.01.T01:three_prime_UTR 20.0%
!! ATTCAAAGAACAAAAAACAT+GGG + Chr3:98702582-98702601 MsG0380017625.01.T01:exon 20.0%
!! GTTACAAGTTACAAAAATAT+CGG + Chr3:98705461-98705480 MsG0380017625.01.T01:intron 20.0%
!! TAAGAGTAAAAAAAATTCAG+AGG - Chr3:98704535-98704554 None:intergenic 20.0%
!! TAATTATTTCAACCACTTAA+CGG + Chr3:98703339-98703358 MsG0380017625.01.T01:intron 20.0%
!! TTATATCTTATGTCCAAATT+TGG - Chr3:98703453-98703472 None:intergenic 20.0%
!!! GAGTTTATTCAATTTCTTTT+TGG + Chr3:98704879-98704898 MsG0380017625.01.T01:intron 20.0%
!!! TACCTATTTTAATTCATTCT+AGG + Chr3:98704762-98704781 MsG0380017625.01.T01:intron 20.0%
!!! TATTCAATTTCTTTTTGGTT+AGG + Chr3:98704884-98704903 MsG0380017625.01.T01:intron 20.0%
!!! TCTCAATTTTTTTTTACTAC+TGG + Chr3:98703206-98703225 MsG0380017625.01.T01:intron 20.0%
!!! TTATTTCTTTCTGAATTCTA+TGG + Chr3:98702920-98702939 MsG0380017625.01.T01:intron 20.0%
! AAAAAATTACACCTTCTAAC+AGG - Chr3:98706349-98706368 None:intergenic 25.0%
! AAAACAAAATAAAGTTGTCC+TGG + Chr3:98704834-98704853 MsG0380017625.01.T01:intron 25.0%
! AAATCCCATATATTCATGAT+CGG - Chr3:98706216-98706235 None:intergenic 25.0%
! AGAGAATTAAATGCTTATCA+AGG + Chr3:98703378-98703397 MsG0380017625.01.T01:intron 25.0%
! ATAATAATTCGTTCAATTGC+AGG + Chr3:98705132-98705151 MsG0380017625.01.T01:intron 25.0%
! CTCCTAGAATGAATTAAAAT+AGG - Chr3:98704767-98704786 None:intergenic 25.0%
! CTTGTATGGTCAAAAAATTT+GGG - Chr3:98703560-98703579 None:intergenic 25.0%
! GGAAAAGAGTCATATATTTA+GGG + Chr3:98703891-98703910 MsG0380017625.01.T01:intron 25.0%
! GGATAAGAAATAATCTATCA+CGG - Chr3:98706328-98706347 None:intergenic 25.0%
! GTACAAGAGACTATTATATT+GGG + Chr3:98704968-98704987 MsG0380017625.01.T01:intron 25.0%
! TAAGGAAACCATAATGAAAA+AGG + Chr3:98704603-98704622 MsG0380017625.01.T01:intron 25.0%
! TACAAGAGACTATTATATTG+GGG + Chr3:98704969-98704988 MsG0380017625.01.T01:intron 25.0%
! TATTCTTCCACAGAAAATAA+AGG - Chr3:98702433-98702452 None:intergenic 25.0%
! TCAATAATGTGTCAAATTAG+TGG - Chr3:98705111-98705130 None:intergenic 25.0%
! TCTTGTATGGTCAAAAAATT+TGG - Chr3:98703561-98703580 None:intergenic 25.0%
! TGAAAATGAGATCCATATTA+TGG + Chr3:98702610-98702629 MsG0380017625.01.T01:CDS 25.0%
! TGAACCTTGTACAATTAAAT+TGG + Chr3:98703256-98703275 MsG0380017625.01.T01:intron 25.0%
!! CTAAATATATGACTCTTTTC+CGG - Chr3:98703892-98703911 None:intergenic 25.0%
!! TTATTTCTTATCCTGTTAGA+AGG + Chr3:98706335-98706354 MsG0380017625.01.T01:three_prime_UTR 25.0%
!! TTGCTTATTGTTCTTTTCTT+AGG + Chr3:98704439-98704458 MsG0380017625.01.T01:CDS 25.0%
!! TTTTTATTATTGCCAAGTGA+TGG + Chr3:98706364-98706383 MsG0380017625.01.T01:three_prime_UTR 25.0%
!!! AAATGAGACCTTTTTCATTA+TGG - Chr3:98704614-98704633 None:intergenic 25.0%
!!! AGGACAACTTTATTTTGTTT+TGG - Chr3:98704835-98704854 None:intergenic 25.0%
!!! CAACAAAAGCATTCTTAAAA+GGG + Chr3:98704566-98704585 MsG0380017625.01.T01:intron 25.0%
!!! CAGGGATAATTTAGTTTTTA+AGG - Chr3:98704157-98704176 None:intergenic 25.0%
!!! CTATTTTAATTCATTCTAGG+AGG + Chr3:98704765-98704784 MsG0380017625.01.T01:intron 25.0%
!!! TAATTTGGTTTGCAAAATGA+AGG - Chr3:98702279-98702298 None:intergenic 25.0%
!!! TCAACAAAAGCATTCTTAAA+AGG + Chr3:98704565-98704584 MsG0380017625.01.T01:intron 25.0%
!!! TTGTTTATTTGTTATGTTGC+AGG + Chr3:98703010-98703029 MsG0380017625.01.T01:intron 25.0%
AAGCTAATGATTGAAGAAGT+TGG + Chr3:98703997-98704016 MsG0380017625.01.T01:intron 30.0%
AATGTATATTGGAAGGAGTT+TGG + Chr3:98705169-98705188 MsG0380017625.01.T01:CDS 30.0%
ACAAGAGACTATTATATTGG+GGG + Chr3:98704970-98704989 MsG0380017625.01.T01:intron 30.0%
ACAGAAAAGTGAAATCTTAC+CGG - Chr3:98702816-98702835 None:intergenic 30.0%
AGCATGATTCCTAATTGAAT+CGG + Chr3:98705798-98705817 MsG0380017625.01.T01:intron 30.0%
AGCTTATTTATGCTTGTTTG+TGG - Chr3:98704125-98704144 None:intergenic 30.0%
AGTACTCCAAAATACTTGTA+TGG + Chr3:98703426-98703445 MsG0380017625.01.T01:intron 30.0%
AGTATAGAGAAACTCTTGTA+TGG - Chr3:98703574-98703593 None:intergenic 30.0%
ATAAGTTTCTGAGTTTCCTA+CGG - Chr3:98706397-98706416 None:intergenic 30.0%
ATACTTGTATGGTCCAAATT+TGG + Chr3:98703437-98703456 MsG0380017625.01.T01:intron 30.0%
ATGTATATTGGAAGGAGTTT+GGG + Chr3:98705170-98705189 MsG0380017625.01.T01:CDS 30.0%
ATTGAAGAAGTTGGAAAATC+CGG + Chr3:98704006-98704025 MsG0380017625.01.T01:intron 30.0%
ATTGAATAAACTCTGACATC+AGG - Chr3:98704872-98704891 None:intergenic 30.0%
ATTGCCGATCATGAATATAT+GGG + Chr3:98706209-98706228 MsG0380017625.01.T01:CDS 30.0%
CACATGCATCTTAATCTAAA+TGG - Chr3:98706443-98706462 None:intergenic 30.0%
CGGAAAAGAGTCATATATTT+AGG + Chr3:98703890-98703909 MsG0380017625.01.T01:intron 30.0%
CTCTCTTTGATTAATGTTCA+GGG - Chr3:98704175-98704194 None:intergenic 30.0%
CTTAGAGTATGTTTCTTACA+AGG + Chr3:98703778-98703797 MsG0380017625.01.T01:intron 30.0%
GAAGAAGACAGTTGAATTAA+TGG - Chr3:98704468-98704487 None:intergenic 30.0%
GAATAAAGATGATGAGAGAT+TGG - Chr3:98706121-98706140 None:intergenic 30.0%
GAGACCAATTTAATTGTACA+AGG - Chr3:98703263-98703282 None:intergenic 30.0%
GATTTCTTATGGAAATCAGA+TGG + Chr3:98702768-98702787 MsG0380017625.01.T01:CDS 30.0%
GCTAAATCATAGTCAATGAT+TGG - Chr3:98704334-98704353 None:intergenic 30.0%
GGTACAAGAGACTATTATAT+TGG + Chr3:98704967-98704986 MsG0380017625.01.T01:intron 30.0%
TAATAATTTCTTCACGACGT+TGG - Chr3:98702400-98702419 None:intergenic 30.0%
TAGCAACATCATCCATAATA+TGG - Chr3:98702625-98702644 None:intergenic 30.0%
TCTCTCTTTGATTAATGTTC+AGG - Chr3:98704176-98704195 None:intergenic 30.0%
TCTGACATCAGGAAAAATAA+TGG - Chr3:98704861-98704880 None:intergenic 30.0%
TGTTCATAGTAGATACATTC+CGG + Chr3:98703870-98703889 MsG0380017625.01.T01:intron 30.0%
TTTAGTATTGTTCCTGAATC+CGG - Chr3:98704028-98704047 None:intergenic 30.0%
TTTATCAGTGCAATCTCATT+AGG + Chr3:98706155-98706174 MsG0380017625.01.T01:CDS 30.0%
TTTGAGAATATCTGCAAGTA+CGG + Chr3:98706233-98706252 MsG0380017625.01.T01:CDS 30.0%
TTTGATCAAAGTGACACTAA+TGG + Chr3:98705035-98705054 MsG0380017625.01.T01:intron 30.0%
! ACAGGTAAAACTGAATTTTC+GGG - Chr3:98702471-98702490 None:intergenic 30.0%
! GACAGGTAAAACTGAATTTT+CGG - Chr3:98702472-98702491 None:intergenic 30.0%
! TCACATTTCAAAAAGTGCAT+TGG - Chr3:98706009-98706028 None:intergenic 30.0%
! TTTGGACCATACAAGTATTT+TGG - Chr3:98703435-98703454 None:intergenic 30.0%
! TTTGTTTCAGGTATGATCAT+GGG + Chr3:98704250-98704269 MsG0380017625.01.T01:intron 30.0%
!! ATTTGTTATGTTGCAGGAAA+TGG + Chr3:98703016-98703035 MsG0380017625.01.T01:intron 30.0%
!! CAAAAGCTGTTGATTTCTTA+TGG + Chr3:98702757-98702776 MsG0380017625.01.T01:CDS 30.0%
!! GTAAGATTTCACTTTTCTGT+TGG + Chr3:98702816-98702835 MsG0380017625.01.T01:intron 30.0%
!! TTAGTGTCACTTTGATCAAA+TGG - Chr3:98705035-98705054 None:intergenic 30.0%
!!! ATTGTGTTGGGTAGTTTTAT+TGG + Chr3:98703053-98703072 MsG0380017625.01.T01:CDS 30.0%
!!! ATTTCTTTTTGGTTAGGTTC+AGG + Chr3:98704890-98704909 MsG0380017625.01.T01:intron 30.0%
!!! GGTAGTTTTATTGGATTTTG+TGG + Chr3:98703062-98703081 MsG0380017625.01.T01:CDS 30.0%
AAGAAAAGCAAATCCACTAG+AGG - Chr3:98705384-98705403 None:intergenic 35.0%
AAGTAAGTTAGAAGCTATCG+CGG - Chr3:98705940-98705959 None:intergenic 35.0%
AATATAGTGACAAGCCAATC+AGG - Chr3:98704421-98704440 None:intergenic 35.0%
ACAGGTAAATTTACCTCTAG+TGG + Chr3:98705368-98705387 MsG0380017625.01.T01:intron 35.0%
ACCAAATGTTGCCATTGAAA+AGG + Chr3:98704937-98704956 MsG0380017625.01.T01:CDS 35.0%
AGAAGACATCCGATTCAATT+AGG - Chr3:98705810-98705829 None:intergenic 35.0%
AGAATCACGTGTCTTACATT+TGG - Chr3:98703189-98703208 None:intergenic 35.0%
ATCAGGAAAAATAATGGTCC+AGG - Chr3:98704855-98704874 None:intergenic 35.0%
ATGTTGCAGGAAATGGAATT+TGG + Chr3:98703023-98703042 MsG0380017625.01.T01:intron 35.0%
ATTCTCTACGTGTTCTCTTT+CGG - Chr3:98703365-98703384 None:intergenic 35.0%
ATTTGGATGGCAAATTGTGT+TGG + Chr3:98703040-98703059 MsG0380017625.01.T01:CDS 35.0%
CCAATAATAAGACTGAGCAT+AGG - Chr3:98703137-98703156 None:intergenic 35.0%
CTAGTCATCTATTGTGTGTT+TGG + Chr3:98705630-98705649 MsG0380017625.01.T01:CDS 35.0%
CTCATCATCTTTATTCTAGC+TGG + Chr3:98706125-98706144 MsG0380017625.01.T01:CDS 35.0%
CTTATGGAAATCAGATGGAT+CGG + Chr3:98702773-98702792 MsG0380017625.01.T01:CDS 35.0%
GAATATAAAGCTCTTCCAAC+TGG + Chr3:98704914-98704933 MsG0380017625.01.T01:CDS 35.0%
GATTGAAAGGGAAGAAATGA+TGG - Chr3:98702327-98702346 None:intergenic 35.0%
GATTGCCGATCATGAATATA+TGG + Chr3:98706208-98706227 MsG0380017625.01.T01:CDS 35.0%
TACAAGGTCTCAAATTCGAT+AGG + Chr3:98703794-98703813 MsG0380017625.01.T01:intron 35.0%
TACATGTTCTGCAGCATATT+GGG + Chr3:98705332-98705351 MsG0380017625.01.T01:intron 35.0%
TAGCGTGTTATGTTTGTTTC+AGG + Chr3:98704238-98704257 MsG0380017625.01.T01:intron 35.0%
TATTCAGAGTTCCGTTTACT+CGG - Chr3:98702213-98702232 None:intergenic 35.0%
TCAACGTTGTATTTCCTGAT+TGG + Chr3:98704404-98704423 MsG0380017625.01.T01:CDS 35.0%
TCGTCAGTTATTGTAGCTTT+GGG + Chr3:98702977-98702996 MsG0380017625.01.T01:intron 35.0%
TGGAGTTGGCATTTCAAATA+TGG + Chr3:98706178-98706197 MsG0380017625.01.T01:CDS 35.0%
TTATGGAAATCAGATGGATC+GGG + Chr3:98702774-98702793 MsG0380017625.01.T01:CDS 35.0%
TTCGTCAGTTATTGTAGCTT+TGG + Chr3:98702976-98702995 MsG0380017625.01.T01:intron 35.0%
TTGGACAACATATTGTGAGA+AGG + Chr3:98706075-98706094 MsG0380017625.01.T01:CDS 35.0%
TTGTCCTTCTAATCCAATGA+CGG - Chr3:98705081-98705100 None:intergenic 35.0%
TTTGGATGGCAAATTGTGTT+GGG + Chr3:98703041-98703060 MsG0380017625.01.T01:CDS 35.0%
! AGTTTGAAACTTACTTGAGG+AGG - Chr3:98705738-98705757 None:intergenic 35.0%
! GTTCGGTGAAGAAGAAAATT+CGG - Chr3:98702494-98702513 None:intergenic 35.0%
! GTTTGAAACTTACTTGAGGA+GGG - Chr3:98705737-98705756 None:intergenic 35.0%
! GTTTGTTTCAGGTATGATCA+TGG + Chr3:98704249-98704268 MsG0380017625.01.T01:intron 35.0%
! TACCTCGTTTTCCTTTTCAA+TGG - Chr3:98704951-98704970 None:intergenic 35.0%
! TCCTTTTCAATGGCAACATT+TGG - Chr3:98704941-98704960 None:intergenic 35.0%
! TGCAGTTTGAAACTTACTTG+AGG - Chr3:98705741-98705760 None:intergenic 35.0%
! TGGATGATGTTGCTATTGTT+TGG + Chr3:98702630-98702649 MsG0380017625.01.T01:CDS 35.0%
!! CCTATGCTCAGTCTTATTAT+TGG + Chr3:98703134-98703153 MsG0380017625.01.T01:CDS 35.0%
!! GTTTGAGATACACTGGATTT+TGG + Chr3:98704082-98704101 MsG0380017625.01.T01:intron 35.0%
!! TGTATCTCAAACTCTGGTTT+TGG - Chr3:98704074-98704093 None:intergenic 35.0%
AAACGATTTCCGGTTCCTTA+TGG + Chr3:98705908-98705927 MsG0380017625.01.T01:CDS 40.0%
AAAGTGACACTAATGGTCTC+TGG + Chr3:98705042-98705061 MsG0380017625.01.T01:intron 40.0%
AACCAACTGTTTGATGAGAG+AGG - Chr3:98705778-98705797 None:intergenic 40.0%
AAGTTGGAAAATCCGGATTC+AGG + Chr3:98704013-98704032 MsG0380017625.01.T01:intron 40.0%
ACACACAATAGATGACTAGC+TGG - Chr3:98705629-98705648 None:intergenic 40.0%
ACCATTTGATTCTTGTCTCC+TGG - Chr3:98704794-98704813 None:intergenic 40.0%
AGAAGAGTGATAGCTTCTAC+TGG + Chr3:98705576-98705595 MsG0380017625.01.T01:CDS 40.0%
AGAAGGCTGATCATCCTATT+TGG + Chr3:98706092-98706111 MsG0380017625.01.T01:CDS 40.0%
AGAGAACATTTGCAGCTTCT+TGG + Chr3:98704191-98704210 MsG0380017625.01.T01:intron 40.0%
AGAGACTATTATATTGGGGG+AGG + Chr3:98704973-98704992 MsG0380017625.01.T01:intron 40.0%
AGGAATTTGAACTCCGTCAT+TGG + Chr3:98705065-98705084 MsG0380017625.01.T01:intron 40.0%
ATAGCTTCTACTGGTGATCA+AGG + Chr3:98705585-98705604 MsG0380017625.01.T01:CDS 40.0%
ATCAGTGCAATCTCATTAGG+TGG + Chr3:98706158-98706177 MsG0380017625.01.T01:CDS 40.0%
ATCCAGTGTATCTCAAACTC+TGG - Chr3:98704080-98704099 None:intergenic 40.0%
ATGATTGGCATATCCAAGGT+AGG - Chr3:98704319-98704338 None:intergenic 40.0%
ATTCAACCTATGCTCATGCT+TGG + Chr3:98704361-98704380 MsG0380017625.01.T01:CDS 40.0%
CAACTGTCTACTACAACCTT+AGG + Chr3:98704284-98704303 MsG0380017625.01.T01:CDS 40.0%
CACAATATGTTGTCCAACCA+AGG - Chr3:98706072-98706091 None:intergenic 40.0%
CTACATGTTCTGCAGCATAT+TGG + Chr3:98705331-98705350 MsG0380017625.01.T01:intron 40.0%
GAGACTATTATATTGGGGGA+GGG + Chr3:98704974-98704993 MsG0380017625.01.T01:intron 40.0%
GAGATAGCAGTCGATGATTT+AGG - Chr3:98703167-98703186 None:intergenic 40.0%
GTCAATGATTGGCATATCCA+AGG - Chr3:98704323-98704342 None:intergenic 40.0%
GTGAAGAAGAAAATTCGGAC+AGG - Chr3:98702489-98702508 None:intergenic 40.0%
TAGCTTCTACTGGTGATCAA+GGG + Chr3:98705586-98705605 MsG0380017625.01.T01:CDS 40.0%
TCCACAGAAAATAAAGGAGC+AGG - Chr3:98702427-98702446 None:intergenic 40.0%
TCTTAAAAGGGCTTGAGACA+TGG + Chr3:98704578-98704597 MsG0380017625.01.T01:intron 40.0%
TGCAGGAAATGGAATTTGGA+TGG + Chr3:98703027-98703046 MsG0380017625.01.T01:intron 40.0%
TGCATAAGTAGCCGAGTAAA+CGG + Chr3:98702199-98702218 MsG0380017625.01.T01:five_prime_UTR 40.0%
TGCCATTGAAAAGGAAAACG+AGG + Chr3:98704946-98704965 MsG0380017625.01.T01:CDS 40.0%
TGTGATGACAGAACAAACCT+TGG - Chr3:98705239-98705258 None:intergenic 40.0%
! AACCAGAGTTTGAGATACAC+TGG + Chr3:98704075-98704094 MsG0380017625.01.T01:intron 40.0%
! AACTCCGTCATTGGATTAGA+AGG + Chr3:98705074-98705093 MsG0380017625.01.T01:intron 40.0%
! CTACTTGCTGAAACGATTTC+CGG + Chr3:98705898-98705917 MsG0380017625.01.T01:CDS 40.0%
!! ACTCCTAGCTCTAGAAAAAG+TGG - Chr3:98705714-98705733 None:intergenic 40.0%
!! CAAGGGAAAGCATTTACAGT+TGG + Chr3:98705603-98705622 MsG0380017625.01.T01:CDS 40.0%
!! TATTGTAGCTTTGGGTGATG+TGG + Chr3:98702985-98703004 MsG0380017625.01.T01:intron 40.0%
!! TTGGGTACTGAACTTGTTAC+AGG + Chr3:98705350-98705369 MsG0380017625.01.T01:intron 40.0%
!!! CTCAAACTCTGGTTTTGGAT+AGG - Chr3:98704069-98704088 None:intergenic 40.0%
ACCAAGACTCGTGTTCTGTT+CGG - Chr3:98702511-98702530 None:intergenic 45.0%
AGGCAACTGCATTGTTCACA+GGG + Chr3:98705553-98705572 MsG0380017625.01.T01:CDS 45.0%
AGGGCTTGAGACATGGAATA+AGG + Chr3:98704585-98704604 MsG0380017625.01.T01:intron 45.0%
ATGCAGATCCCAATTGCAGT+TGG + Chr3:98705516-98705535 MsG0380017625.01.T01:intron 45.0%
ATGGCAACATTTGGTCCAGT+TGG - Chr3:98704932-98704951 None:intergenic 45.0%
CAGTTACCCCAACTGCAATT+GGG - Chr3:98705527-98705546 None:intergenic 45.0%
CTCATGCTTGGTATCAGCAT+TGG + Chr3:98704373-98704392 MsG0380017625.01.T01:CDS 45.0%
CTGATACCAAGCATGAGCAT+AGG - Chr3:98704370-98704389 None:intergenic 45.0%
GAATCGGATGTCTTCTGTGT+AGG + Chr3:98705814-98705833 MsG0380017625.01.T01:intron 45.0%
GCAATCTCATTAGGTGGAGT+TGG + Chr3:98706164-98706183 MsG0380017625.01.T01:CDS 45.0%
GCCAGGAGACAAGAATCAAA+TGG + Chr3:98704790-98704809 MsG0380017625.01.T01:intron 45.0%
GGAACTCTGAATATCACACG+CGG + Chr3:98702220-98702239 MsG0380017625.01.T01:five_prime_UTR 45.0%
GGAGAATGTCATTGCGAAAG+TGG - Chr3:98705855-98705874 None:intergenic 45.0%
TACGGAATCACTCCATCACT+TGG - Chr3:98706379-98706398 None:intergenic 45.0%
TATTCAAAAGCTGCGAACCG+AGG + Chr3:98706286-98706305 MsG0380017625.01.T01:three_prime_UTR 45.0%
TGCAGATCCCAATTGCAGTT+GGG + Chr3:98705517-98705536 MsG0380017625.01.T01:intron 45.0%
TGCCTCTCTCATCAAACAGT+TGG + Chr3:98705773-98705792 MsG0380017625.01.T01:intron 45.0%
TTCCACAACAGACATAGACG+AGG - Chr3:98705876-98705895 None:intergenic 45.0%
TTGGGCTACTAGCATTTGTG+TGG + Chr3:98705188-98705207 MsG0380017625.01.T01:CDS 45.0%
! AAGTGATGGAGTGATTCCGT+AGG + Chr3:98706378-98706397 MsG0380017625.01.T01:three_prime_UTR 45.0%
! CAGCAATCCACCGATTATAC+CGG - Chr3:98705664-98705683 None:intergenic 45.0%
!! ACTAGGAGGCGGATTTGTTA+TGG + Chr3:98705686-98705705 MsG0380017625.01.T01:CDS 45.0%
!! CTAGGAGGCGGATTTGTTAT+GGG + Chr3:98705687-98705706 MsG0380017625.01.T01:CDS 45.0%
!! CTATTGTGTGTTTGGTGTGC+TGG + Chr3:98705638-98705657 MsG0380017625.01.T01:CDS 45.0%
!! GGTATAATCGGTGGATTGCT+GGG + Chr3:98705663-98705682 MsG0380017625.01.T01:CDS 45.0%
!! TTTGGAAGTGTTGGAGGTGT+AGG + Chr3:98703092-98703111 MsG0380017625.01.T01:CDS 45.0%
!!! GCCTGCTCCTTTATTTTCTG+TGG + Chr3:98702423-98702442 MsG0380017625.01.T01:five_prime_UTR 45.0%
!!! GGTCCACTTTTTCTAGAGCT+AGG + Chr3:98705708-98705727 MsG0380017625.01.T01:CDS 45.0%
ACCGAACAGAACACGAGTCT+TGG + Chr3:98702507-98702526 MsG0380017625.01.T01:five_prime_UTR 50.0%
AGCTCTTTACTTGAGCCTGG+TGG + Chr3:98706034-98706053 MsG0380017625.01.T01:intron 50.0%
AGGTAGGATGTCTCAGCCTA+AGG - Chr3:98704303-98704322 None:intergenic 50.0%
CACAGCTCTTTACTTGAGCC+TGG + Chr3:98706031-98706050 MsG0380017625.01.T01:intron 50.0%
CCTTGCACTACAGATTGCCA+AGG + Chr3:98705219-98705238 MsG0380017625.01.T01:CDS 50.0%
CCTTGGCAATCTGTAGTGCA+AGG - Chr3:98705222-98705241 None:intergenic 50.0%
CGGAACGAACCATAAGGAAC+CGG - Chr3:98705920-98705939 None:intergenic 50.0%
CTATCGCGGAACGAACCATA+AGG - Chr3:98705926-98705945 None:intergenic 50.0%
CTCCTCGTCTATGTCTGTTG+TGG + Chr3:98705871-98705890 MsG0380017625.01.T01:CDS 50.0%
GAGGCAACTGCATTGTTCAC+AGG + Chr3:98705552-98705571 MsG0380017625.01.T01:CDS 50.0%
GATCGGGTTATCAACACGTG+TGG + Chr3:98702790-98702809 MsG0380017625.01.T01:CDS 50.0%
GCAGATCCCAATTGCAGTTG+GGG + Chr3:98705518-98705537 MsG0380017625.01.T01:intron 50.0%
GCAGTTACCCCAACTGCAAT+TGG - Chr3:98705528-98705547 None:intergenic 50.0%
GCTACTATTGCAGCCTTGGT+TGG + Chr3:98706056-98706075 MsG0380017625.01.T01:CDS 50.0%
GTGACACTAATGGTCTCTGG+AGG + Chr3:98705045-98705064 MsG0380017625.01.T01:intron 50.0%
GTTCTCTTTCGGCCGTTAAG+TGG - Chr3:98703354-98703373 None:intergenic 50.0%
TAGGCTGAGACATCCTACCT+TGG + Chr3:98704303-98704322 MsG0380017625.01.T01:CDS 50.0%
TGTCATTGCGAAAGTGGCTG+TGG - Chr3:98705849-98705868 None:intergenic 50.0%
! ATCACGGCCAACTTAGCTCT+TGG - Chr3:98706312-98706331 None:intergenic 50.0%
! ATTCATTCTAGGAGGCTGCC+AGG + Chr3:98704773-98704792 MsG0380017625.01.T01:intron 50.0%
! GGATTTTGTGGAGCTGCGTT+TGG + Chr3:98703074-98703093 MsG0380017625.01.T01:CDS 50.0%
!! CGGTATAATCGGTGGATTGC+TGG + Chr3:98705662-98705681 MsG0380017625.01.T01:CDS 50.0%
ACCGAGGCCAAGAGCTAAGT+TGG + Chr3:98706302-98706321 MsG0380017625.01.T01:three_prime_UTR 55.0%
AGGCTGCAATAGTAGCCACC+AGG - Chr3:98706052-98706071 None:intergenic 55.0%
AGTTGGGGTAACTGCGTACG+AGG + Chr3:98705533-98705552 MsG0380017625.01.T01:CDS 55.0%
CTTCACGACGTTGGCGTGAA+GGG - Chr3:98702391-98702410 None:intergenic 55.0%
GGGTTATCAACACGTGTGGC+CGG + Chr3:98702794-98702813 MsG0380017625.01.T01:CDS 55.0%
GGTGGCTACTATTGCAGCCT+TGG + Chr3:98706052-98706071 MsG0380017625.01.T01:CDS 55.0%
TCTTCACGACGTTGGCGTGA+AGG - Chr3:98702392-98702411 None:intergenic 55.0%
! AGTGTTGGAGGTGTAGGTGG+TGG + Chr3:98703098-98703117 MsG0380017625.01.T01:CDS 55.0%
! GCCAACTTAGCTCTTGGCCT+CGG - Chr3:98706306-98706325 None:intergenic 55.0%
! GGAGCTGCGTTTGGAAGTGT+TGG + Chr3:98703083-98703102 MsG0380017625.01.T01:CDS 55.0%
! GGTGTGCTGGCCGGTATAAT+CGG + Chr3:98705651-98705670 MsG0380017625.01.T01:CDS 55.0%
!! ATCGGTGGATTGCTGGGACT+AGG + Chr3:98705669-98705688 MsG0380017625.01.T01:CDS 55.0%
!! GCTGCGTTTGGAAGTGTTGG+AGG + Chr3:98703086-98703105 MsG0380017625.01.T01:CDS 55.0%
!! GGAAGTGTTGGAGGTGTAGG+TGG + Chr3:98703095-98703114 MsG0380017625.01.T01:CDS 55.0%
!! TGTGTGTTTGGTGTGCTGGC+CGG + Chr3:98705642-98705661 MsG0380017625.01.T01:CDS 55.0%
GGATTGCTGGGACTAGGAGG+CGG + Chr3:98705675-98705694 MsG0380017625.01.T01:CDS 60.0%
! GTGCTGGCCGGTATAATCGG+TGG + Chr3:98705654-98705673 MsG0380017625.01.T01:CDS 60.0%
! GTTGGAGGTGTAGGTGGTGG+TGG + Chr3:98703101-98703120 MsG0380017625.01.T01:CDS 60.0%
!! GGTGGATTGCTGGGACTAGG+AGG + Chr3:98705672-98705691 MsG0380017625.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 98702121 98706525 98702121 ID=MsG0380017625.01;Name=MsG0380017625.01
Chr3 mRNA 98702121 98706525 98702121 ID=MsG0380017625.01.T01;Parent=MsG0380017625.01;Name=MsG0380017625.01.T01;_AED=0.39;_eAED=0.39;_QI=479|0.71|1|1|1|1|8|263|422
Chr3 exon 98702121 98702815 98702121 ID=MsG0380017625.01.T01:exon:17763;Parent=MsG0380017625.01.T01
Chr3 exon 98703032 98703191 98703032 ID=MsG0380017625.01.T01:exon:17764;Parent=MsG0380017625.01.T01
Chr3 exon 98704260 98704460 98704260 ID=MsG0380017625.01.T01:exon:17765;Parent=MsG0380017625.01.T01
Chr3 exon 98704906 98704967 98704906 ID=MsG0380017625.01.T01:exon:17766;Parent=MsG0380017625.01.T01
Chr3 exon 98705154 98705240 98705154 ID=MsG0380017625.01.T01:exon:17767;Parent=MsG0380017625.01.T01
Chr3 exon 98705522 98705743 98705522 ID=MsG0380017625.01.T01:exon:17768;Parent=MsG0380017625.01.T01
Chr3 exon 98705836 98705929 98705836 ID=MsG0380017625.01.T01:exon:17769;Parent=MsG0380017625.01.T01
Chr3 exon 98706036 98706525 98706036 ID=MsG0380017625.01.T01:exon:17770;Parent=MsG0380017625.01.T01
Chr3 five_prime_UTR 98702121 98702599 98702121 ID=MsG0380017625.01.T01:five_prime_utr;Parent=MsG0380017625.01.T01
Chr3 CDS 98702600 98702815 98702600 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98703032 98703191 98703032 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98704260 98704460 98704260 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98704906 98704967 98704906 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98705154 98705240 98705154 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98705522 98705743 98705522 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98705836 98705929 98705836 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 CDS 98706036 98706262 98706036 ID=MsG0380017625.01.T01:cds;Parent=MsG0380017625.01.T01
Chr3 three_prime_UTR 98706263 98706525 98706263 ID=MsG0380017625.01.T01:three_prime_utr;Parent=MsG0380017625.01.T01
Gene Sequence

>MsG0380017625.01.T01

ATGGGTGACATGAAAATGAGATCCATATTATGGATGATGTTGCTATTGTTTGGTTCTTTTTTGATTGTATCTGCTGAAAGAAAGCTTGTGAAAATACAACTACCAAATTTTAATGTTACTAATACTCTAACTCAAAAACATGAACAAAGTTTTCTCACAAAAGCTGTTGATTTCTTATGGAAATCAGATGGATCGGGTTATCAACACGTGTGGCCGGAAATGGAATTTGGATGGCAAATTGTGTTGGGTAGTTTTATTGGATTTTGTGGAGCTGCGTTTGGAAGTGTTGGAGGTGTAGGTGGTGGTGGCATATTCGTTCCTATGCTCAGTCTTATTATTGGTTTTGATCCTAAATCATCGACTGCTATCTCCAAATGTATGATCATGGGTGCAGCTCTGTCAACTGTCTACTACAACCTTAGGCTGAGACATCCTACCTTGGATATGCCAATCATTGACTATGATTTAGCACTTCTCATTCAACCTATGCTCATGCTTGGTATCAGCATTGGAGTTGTCTTCAACGTTGTATTTCCTGATTGGCTTGTCACTATATTGCTTATTGTTCTTTTCTTAGGTTCAGGAGAATATAAAGCTCTTCCAACTGGACCAAATGTTGCCATTGAAAAGGAAAACGAGGTGTCTATAATTGAAAATGTATATTGGAAGGAGTTTGGGCTACTAGCATTTGTGTGGATTTCATTCCTTGCACTACAGATTGCCAAGATCCCAATTGCAGTTGGGGTAACTGCGTACGAGGCAACTGCATTGTTCACAGGGAGAAGAGTGATAGCTTCTACTGGTGATCAAGGGAAAGCATTTACAGTTGGCCAGCTAGTCATCTATTGTGTGTTTGGTGTGCTGGCCGGTATAATCGGTGGATTGCTGGGACTAGGAGGCGGATTTGTTATGGGTCCACTTTTTCTAGAGCTAGGAGTCCCTCCTCAAGTGTCAAGCGCCACAGCCACTTTCGCAATGACATTCTCCTCGTCTATGTCTGTTGTGGAATACTACTTGCTGAAACGATTTCCGGTTCCTTATGCTCTTTACTTGAGCCTGGTGGCTACTATTGCAGCCTTGGTTGGACAACATATTGTGAGAAGGCTGATCATCCTATTTGGAAGAGCATCTCTCATCATCTTTATTCTAGCTGGCACAATATTTATCAGTGCAATCTCATTAGGTGGAGTTGGCATTTCAAATATGGTGCACAAGATTGCCGATCATGAATATATGGGATTTGAGAATATCTGCAAGTACGGATCATAG
Protein sequence

>MsG0380017625.01.T01

MGDMKMRSILWMMLLLFGSFLIVSAERKLVKIQLPNFNVTNTLTQKHEQSFLTKAVDFLWKSDGSGYQHVWPEMEFGWQIVLGSFIGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSSTAISKCMIMGAALSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVVFNVVFPDWLVTILLIVLFLGSGEYKALPTGPNVAIEKENEVSIIENVYWKEFGLLAFVWISFLALQIAKIPIAVGVTAYEATALFTGRRVIASTGDQGKAFTVGQLVIYCVFGVLAGIIGGLLGLGGGFVMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLSLVATIAALVGQHIVRRLIILFGRASLIIFILAGTIFISAISLGGVGISNMVHKIADHEYMGFENICKYGS*