Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046800.01.T01 | XP_003609375.2 | 92.029 | 414 | 13 | 2 | 1 | 394 | 188 | 601 | 0 | 776 |
| MsG0880046800.01.T03 | XP_003609375.2 | 94.444 | 414 | 13 | 1 | 1 | 404 | 188 | 601 | 0 | 804 |
| MsG0880046800.01.T04 | XP_003609375.2 | 95.679 | 486 | 21 | 0 | 1 | 486 | 116 | 601 | 0 | 971 |
| MsG0880046800.01.T02 | XP_003609375.2 | 93.827 | 486 | 20 | 1 | 1 | 476 | 116 | 601 | 0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046800.01.T01 | Q8LF20 | 56.867 | 415 | 148 | 8 | 1 | 394 | 249 | 653 | 8.55E-140 | 416 |
| MsG0880046800.01.T02 | Q8S9J8 | 51.796 | 529 | 192 | 9 | 2 | 476 | 116 | 635 | 1.15E-166 | 487 |
| MsG0880046800.01.T03 | Q8LF20 | 58.313 | 415 | 152 | 7 | 1 | 404 | 249 | 653 | 2.36E-146 | 433 |
| MsG0880046800.01.T04 | Q8S9J8 | 52.354 | 531 | 196 | 10 | 2 | 486 | 116 | 635 | 9.68E-170 | 495 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046800.01.T01 | G7JE64 | 92.029 | 414 | 13 | 2 | 1 | 394 | 188 | 601 | 0.0 | 776 |
| MsG0880046800.01.T02 | G7JE64 | 93.827 | 486 | 20 | 1 | 1 | 476 | 116 | 601 | 0.0 | 944 |
| MsG0880046800.01.T03 | G7JE64 | 94.444 | 414 | 13 | 1 | 1 | 404 | 188 | 601 | 0.0 | 804 |
| MsG0880046800.01.T04 | G7JE64 | 95.679 | 486 | 21 | 0 | 1 | 486 | 116 | 601 | 0.0 | 971 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880045914.01 | MsG0880046800.01 | 0.805605 | 1.231300e-49 | 6.542146e-47 |
| MsG0180003241.01 | MsG0880046800.01 | 0.817403 | 3.358185e-52 | 2.443298e-49 |
| MsG0180006061.01 | MsG0880046800.01 | 0.810723 | 1.000491e-50 | 6.077018e-48 |
| MsG0280011105.01 | MsG0880046800.01 | 0.833444 | 5.315406e-56 | 6.122653e-53 |
| MsG0680030621.01 | MsG0880046800.01 | 0.836303 | 1.012725e-56 | 1.271287e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046800.01.T01 | MTR_4g114960 | 92.029 | 414 | 13 | 2 | 1 | 394 | 188 | 601 | 0.0 | 776 |
| MsG0880046800.01.T01 | MTR_3g106900 | 56.635 | 422 | 146 | 6 | 1 | 394 | 229 | 641 | 2.20e-151 | 442 |
| MsG0880046800.01.T01 | MTR_2g008170 | 38.929 | 411 | 221 | 5 | 1 | 391 | 206 | 606 | 2.80e-82 | 263 |
| MsG0880046800.01.T01 | MTR_8g008860 | 39.900 | 401 | 217 | 9 | 1 | 391 | 202 | 588 | 7.01e-82 | 262 |
| MsG0880046800.01.T01 | MTR_3g080490 | 43.885 | 139 | 78 | 0 | 1 | 139 | 179 | 317 | 9.11e-36 | 139 |
| MsG0880046800.01.T01 | MTR_4g127440 | 28.363 | 342 | 222 | 7 | 1 | 334 | 184 | 510 | 4.99e-28 | 116 |
| MsG0880046800.01.T01 | MTR_4g115420 | 27.954 | 347 | 195 | 9 | 6 | 334 | 179 | 488 | 1.84e-27 | 114 |
| MsG0880046800.01.T01 | MTR_2g037980 | 35.556 | 135 | 86 | 1 | 6 | 140 | 188 | 321 | 1.03e-20 | 94.4 |
| MsG0880046800.01.T01 | MTR_8g106040 | 35.659 | 129 | 83 | 0 | 6 | 134 | 187 | 315 | 7.76e-17 | 82.0 |
| MsG0880046800.01.T01 | MTR_0530s0020 | 29.134 | 127 | 90 | 0 | 1 | 127 | 158 | 284 | 2.93e-13 | 71.6 |
| MsG0880046800.01.T03 | MTR_4g114960 | 94.444 | 414 | 13 | 1 | 1 | 404 | 188 | 601 | 0.0 | 804 |
| MsG0880046800.01.T03 | MTR_3g106900 | 58.531 | 422 | 148 | 5 | 1 | 404 | 229 | 641 | 9.54e-161 | 467 |
| MsG0880046800.01.T03 | MTR_8g008860 | 40.541 | 407 | 216 | 10 | 1 | 401 | 202 | 588 | 6.18e-85 | 270 |
| MsG0880046800.01.T03 | MTR_2g008170 | 39.709 | 413 | 225 | 6 | 1 | 401 | 206 | 606 | 4.26e-84 | 268 |
| MsG0880046800.01.T03 | MTR_3g080490 | 43.885 | 139 | 78 | 0 | 1 | 139 | 179 | 317 | 1.07e-35 | 139 |
| MsG0880046800.01.T03 | MTR_4g127440 | 27.557 | 352 | 222 | 8 | 1 | 344 | 184 | 510 | 6.61e-26 | 110 |
| MsG0880046800.01.T03 | MTR_4g115420 | 27.451 | 357 | 194 | 10 | 6 | 344 | 179 | 488 | 2.29e-25 | 108 |
| MsG0880046800.01.T03 | MTR_2g037980 | 35.556 | 135 | 86 | 1 | 6 | 140 | 188 | 321 | 1.13e-20 | 94.4 |
| MsG0880046800.01.T03 | MTR_8g106040 | 35.659 | 129 | 83 | 0 | 6 | 134 | 187 | 315 | 1.00e-16 | 82.0 |
| MsG0880046800.01.T03 | MTR_0530s0020 | 29.134 | 127 | 90 | 0 | 1 | 127 | 158 | 284 | 3.11e-13 | 71.6 |
| MsG0880046800.01.T04 | MTR_4g114960 | 95.679 | 486 | 21 | 0 | 1 | 486 | 116 | 601 | 0.0 | 971 |
| MsG0880046800.01.T04 | MTR_3g106900 | 53.184 | 534 | 192 | 7 | 2 | 486 | 117 | 641 | 0.0 | 533 |
| MsG0880046800.01.T04 | MTR_8g008860 | 38.114 | 509 | 250 | 12 | 2 | 483 | 118 | 588 | 2.37e-102 | 318 |
| MsG0880046800.01.T04 | MTR_2g008170 | 37.984 | 516 | 259 | 9 | 2 | 483 | 118 | 606 | 1.85e-101 | 317 |
| MsG0880046800.01.T04 | MTR_3g080490 | 38.967 | 213 | 118 | 3 | 2 | 211 | 114 | 317 | 2.61e-48 | 179 |
| MsG0880046800.01.T04 | MTR_4g115420 | 25.734 | 443 | 236 | 12 | 2 | 426 | 121 | 488 | 4.32e-33 | 132 |
| MsG0880046800.01.T04 | MTR_2g037980 | 31.280 | 211 | 138 | 3 | 2 | 212 | 118 | 321 | 3.80e-29 | 121 |
| MsG0880046800.01.T04 | MTR_4g127440 | 30.244 | 205 | 130 | 4 | 1 | 201 | 117 | 312 | 5.09e-26 | 111 |
| MsG0880046800.01.T04 | MTR_8g106040 | 31.000 | 200 | 126 | 2 | 9 | 206 | 126 | 315 | 6.03e-19 | 89.4 |
| MsG0880046800.01.T04 | MTR_0530s0020 | 23.116 | 199 | 134 | 2 | 2 | 199 | 104 | 284 | 6.98e-16 | 80.5 |
| MsG0880046800.01.T02 | MTR_4g114960 | 93.827 | 486 | 20 | 1 | 1 | 476 | 116 | 601 | 0.0 | 944 |
| MsG0880046800.01.T02 | MTR_3g106900 | 52.622 | 534 | 185 | 6 | 2 | 476 | 117 | 641 | 0.0 | 526 |
| MsG0880046800.01.T02 | MTR_8g008860 | 39.192 | 495 | 254 | 11 | 2 | 473 | 118 | 588 | 5.24e-104 | 322 |
| MsG0880046800.01.T02 | MTR_2g008170 | 38.523 | 501 | 267 | 7 | 2 | 473 | 118 | 606 | 6.24e-101 | 315 |
| MsG0880046800.01.T02 | MTR_3g080490 | 38.967 | 213 | 118 | 3 | 2 | 211 | 114 | 317 | 1.70e-48 | 179 |
| MsG0880046800.01.T02 | MTR_4g115420 | 26.328 | 433 | 236 | 12 | 2 | 416 | 121 | 488 | 1.61e-34 | 136 |
| MsG0880046800.01.T02 | MTR_4g127440 | 27.570 | 428 | 264 | 12 | 1 | 416 | 117 | 510 | 2.36e-34 | 136 |
| MsG0880046800.01.T02 | MTR_2g037980 | 31.280 | 211 | 138 | 3 | 2 | 212 | 118 | 321 | 2.75e-29 | 121 |
| MsG0880046800.01.T02 | MTR_8g106040 | 31.000 | 200 | 126 | 2 | 9 | 206 | 126 | 315 | 5.67e-19 | 89.4 |
| MsG0880046800.01.T02 | MTR_0530s0020 | 23.116 | 199 | 134 | 2 | 2 | 199 | 104 | 284 | 7.15e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046800.01.T01 | AT2G25430 | 56.867 | 415 | 148 | 8 | 1 | 394 | 249 | 653 | 8.72e-141 | 416 |
| MsG0880046800.01.T01 | AT4G32285 | 54.808 | 416 | 157 | 7 | 1 | 394 | 229 | 635 | 1.13e-138 | 410 |
| MsG0880046800.01.T01 | AT4G32285 | 54.808 | 416 | 157 | 7 | 1 | 394 | 229 | 635 | 1.13e-138 | 410 |
| MsG0880046800.01.T01 | AT1G03050 | 41.162 | 396 | 191 | 8 | 1 | 362 | 198 | 585 | 2.72e-95 | 297 |
| MsG0880046800.01.T01 | AT4G02650 | 40.050 | 402 | 214 | 5 | 1 | 377 | 203 | 602 | 5.29e-92 | 289 |
| MsG0880046800.01.T01 | AT1G14910 | 30.994 | 342 | 200 | 8 | 1 | 330 | 178 | 495 | 5.52e-35 | 137 |
| MsG0880046800.01.T01 | AT1G14910 | 30.994 | 342 | 200 | 8 | 1 | 330 | 183 | 500 | 6.56e-35 | 136 |
| MsG0880046800.01.T01 | AT5G57200 | 30.172 | 348 | 217 | 7 | 1 | 329 | 182 | 522 | 9.99e-32 | 127 |
| MsG0880046800.01.T01 | AT1G05020 | 44.186 | 129 | 72 | 0 | 1 | 129 | 202 | 330 | 4.80e-31 | 125 |
| MsG0880046800.01.T01 | AT4G25940 | 28.065 | 367 | 198 | 9 | 1 | 329 | 190 | 528 | 1.42e-30 | 123 |
| MsG0880046800.01.T01 | AT2G01600 | 28.446 | 341 | 200 | 10 | 1 | 326 | 183 | 494 | 2.30e-27 | 114 |
| MsG0880046800.01.T01 | AT5G35200 | 27.240 | 279 | 183 | 6 | 6 | 280 | 181 | 443 | 2.28e-21 | 96.3 |
| MsG0880046800.01.T01 | AT5G35200 | 27.240 | 279 | 183 | 6 | 6 | 280 | 181 | 443 | 2.28e-21 | 96.3 |
| MsG0880046800.01.T03 | AT2G25430 | 58.313 | 415 | 152 | 7 | 1 | 404 | 249 | 653 | 2.41e-147 | 433 |
| MsG0880046800.01.T03 | AT4G32285 | 56.490 | 416 | 160 | 6 | 1 | 404 | 229 | 635 | 2.97e-145 | 427 |
| MsG0880046800.01.T03 | AT4G32285 | 56.490 | 416 | 160 | 6 | 1 | 404 | 229 | 635 | 2.97e-145 | 427 |
| MsG0880046800.01.T03 | AT1G03050 | 42.424 | 396 | 196 | 8 | 1 | 372 | 198 | 585 | 5.91e-101 | 312 |
| MsG0880046800.01.T03 | AT4G02650 | 42.289 | 402 | 215 | 5 | 1 | 387 | 203 | 602 | 2.07e-95 | 298 |
| MsG0880046800.01.T03 | AT1G14910 | 30.114 | 352 | 200 | 8 | 1 | 340 | 178 | 495 | 3.28e-34 | 135 |
| MsG0880046800.01.T03 | AT1G14910 | 30.114 | 352 | 200 | 8 | 1 | 340 | 183 | 500 | 3.81e-34 | 134 |
| MsG0880046800.01.T03 | AT5G57200 | 30.168 | 358 | 214 | 9 | 1 | 339 | 182 | 522 | 3.17e-31 | 125 |
| MsG0880046800.01.T03 | AT1G05020 | 44.186 | 129 | 72 | 0 | 1 | 129 | 202 | 330 | 4.78e-31 | 125 |
| MsG0880046800.01.T03 | AT4G25940 | 28.382 | 377 | 194 | 11 | 1 | 339 | 190 | 528 | 6.45e-30 | 122 |
| MsG0880046800.01.T03 | AT2G01600 | 27.920 | 351 | 199 | 11 | 1 | 336 | 183 | 494 | 4.77e-27 | 113 |
| MsG0880046800.01.T03 | AT5G35200 | 26.303 | 403 | 250 | 12 | 6 | 403 | 181 | 541 | 1.17e-21 | 97.4 |
| MsG0880046800.01.T03 | AT5G35200 | 26.303 | 403 | 250 | 12 | 6 | 403 | 181 | 541 | 1.17e-21 | 97.4 |
| MsG0880046800.01.T04 | AT4G32285 | 52.354 | 531 | 196 | 10 | 2 | 486 | 116 | 635 | 9.87e-171 | 495 |
| MsG0880046800.01.T04 | AT4G32285 | 52.354 | 531 | 196 | 10 | 2 | 486 | 116 | 635 | 9.87e-171 | 495 |
| MsG0880046800.01.T04 | AT2G25430 | 58.645 | 428 | 162 | 6 | 62 | 486 | 238 | 653 | 3.06e-156 | 459 |
| MsG0880046800.01.T04 | AT2G25430 | 62.000 | 50 | 19 | 0 | 2 | 51 | 116 | 165 | 1.43e-13 | 73.6 |
| MsG0880046800.01.T04 | AT1G03050 | 39.836 | 487 | 239 | 9 | 2 | 454 | 119 | 585 | 2.53e-117 | 357 |
| MsG0880046800.01.T04 | AT4G02650 | 40.400 | 500 | 250 | 9 | 2 | 469 | 119 | 602 | 2.46e-108 | 335 |
| MsG0880046800.01.T04 | AT1G05020 | 38.278 | 209 | 120 | 3 | 2 | 201 | 122 | 330 | 8.86e-44 | 164 |
| MsG0880046800.01.T04 | AT1G14910 | 29.099 | 433 | 245 | 12 | 2 | 422 | 118 | 500 | 2.04e-43 | 163 |
| MsG0880046800.01.T04 | AT1G14910 | 28.571 | 434 | 241 | 13 | 2 | 422 | 118 | 495 | 1.98e-39 | 152 |
| MsG0880046800.01.T04 | AT4G25940 | 28.035 | 453 | 251 | 13 | 2 | 421 | 118 | 528 | 5.13e-39 | 150 |
| MsG0880046800.01.T04 | AT5G57200 | 28.409 | 440 | 260 | 12 | 2 | 421 | 118 | 522 | 5.59e-38 | 147 |
| MsG0880046800.01.T04 | AT2G01600 | 27.739 | 429 | 246 | 14 | 2 | 418 | 118 | 494 | 6.94e-36 | 140 |
| MsG0880046800.01.T04 | AT5G35200 | 25.153 | 489 | 291 | 14 | 2 | 485 | 123 | 541 | 6.04e-29 | 120 |
| MsG0880046800.01.T04 | AT5G35200 | 25.153 | 489 | 291 | 14 | 2 | 485 | 123 | 541 | 6.04e-29 | 120 |
| MsG0880046800.01.T02 | AT4G32285 | 51.796 | 529 | 192 | 9 | 2 | 476 | 116 | 635 | 1.17e-167 | 487 |
| MsG0880046800.01.T02 | AT4G32285 | 51.796 | 529 | 192 | 9 | 2 | 476 | 116 | 635 | 1.17e-167 | 487 |
| MsG0880046800.01.T02 | AT2G25430 | 58.216 | 426 | 157 | 7 | 62 | 476 | 238 | 653 | 4.44e-151 | 445 |
| MsG0880046800.01.T02 | AT2G25430 | 62.000 | 50 | 19 | 0 | 2 | 51 | 116 | 165 | 1.24e-13 | 73.9 |
| MsG0880046800.01.T02 | AT1G03050 | 41.053 | 475 | 240 | 9 | 2 | 444 | 119 | 585 | 4.15e-119 | 362 |
| MsG0880046800.01.T02 | AT4G02650 | 40.741 | 486 | 258 | 7 | 2 | 459 | 119 | 602 | 6.75e-110 | 338 |
| MsG0880046800.01.T02 | AT1G14910 | 29.787 | 423 | 245 | 11 | 2 | 412 | 118 | 500 | 3.98e-45 | 168 |
| MsG0880046800.01.T02 | AT1G05020 | 38.278 | 209 | 120 | 3 | 2 | 201 | 122 | 330 | 9.12e-44 | 163 |
| MsG0880046800.01.T02 | AT1G14910 | 29.245 | 424 | 241 | 12 | 2 | 412 | 118 | 495 | 4.17e-41 | 156 |
| MsG0880046800.01.T02 | AT5G57200 | 29.070 | 430 | 260 | 12 | 2 | 411 | 118 | 522 | 1.63e-39 | 150 |
| MsG0880046800.01.T02 | AT4G25940 | 27.494 | 451 | 246 | 13 | 2 | 411 | 118 | 528 | 1.04e-38 | 149 |
| MsG0880046800.01.T02 | AT2G01600 | 27.765 | 425 | 241 | 14 | 2 | 408 | 118 | 494 | 7.75e-37 | 143 |
| MsG0880046800.01.T02 | AT5G35200 | 25.678 | 479 | 291 | 14 | 2 | 475 | 123 | 541 | 9.20e-30 | 122 |
| MsG0880046800.01.T02 | AT5G35200 | 25.678 | 479 | 291 | 14 | 2 | 475 | 123 | 541 | 9.20e-30 | 122 |
Find 138 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCTCGACCGCGTATT+AGG | 0.219216 | 8:-78392344 | MsG0880046800.01.T03:CDS |
| CAGACACCGGCGGCTGAAAT+AGG | 0.226915 | 8:-78391663 | MsG0880046800.01.T03:CDS |
| TGCCAATTCATCCATCATTT+TGG | 0.231002 | 8:+78392139 | None:intergenic |
| CTATGGTTGGTGTAAGGATA+TGG | 0.234685 | 8:-78392111 | MsG0880046800.01.T03:CDS |
| GAAGGTTTGTGGGAAGAATT+TGG | 0.266460 | 8:-78391711 | MsG0880046800.01.T03:intron |
| TTGAAAAGTGTTGTTGAATC+TGG | 0.266467 | 8:-78392473 | MsG0880046800.01.T04:CDS |
| GAATCTGGGGATGCTGAATT+TGG | 0.275355 | 8:-78392458 | MsG0880046800.01.T04:CDS |
| GTCGAAACAGAAGGCTGATT+TGG | 0.279481 | 8:-78391595 | MsG0880046800.01.T03:CDS |
| CAACAATTATGGCAGCAATA+TGG | 0.293512 | 8:-78391294 | MsG0880046800.01.T03:CDS |
| GATGAATTGGCAGGCTTCTA+TGG | 0.295295 | 8:-78392128 | MsG0880046800.01.T03:CDS |
| AATGAAAGCTGAGAGGGTTT+TGG | 0.301505 | 8:-78392387 | MsG0880046800.01.T03:CDS |
| ATGAGGCTCATTCTAGTTCT+TGG | 0.304967 | 8:-78392571 | MsG0880046800.01.T04:CDS |
| TTGTTCAGGAACAACAATTA+TGG | 0.354466 | 8:-78391305 | MsG0880046800.01.T03:CDS |
| AGTTATGGAATGCCACAATT+TGG | 0.360081 | 8:-78391207 | MsG0880046800.01.T03:CDS |
| CTGAAACACCATCGTCTCTA+AGG | 0.362617 | 8:+78391796 | None:intergenic |
| TGAGAAGAGGTTGGAGGTTA+AGG | 0.363649 | 8:-78391982 | MsG0880046800.01.T03:CDS |
| AACAATTATGGCAGCAATAT+GGG | 0.368947 | 8:-78391293 | MsG0880046800.01.T03:CDS |
| GGTGTTGATGGATAGGTTTA+TGG | 0.371722 | 8:-78392213 | MsG0880046800.01.T03:CDS |
| TGAACACGAGGAGTTTCTTT+AGG | 0.373021 | 8:+78391843 | None:intergenic |
| ACAAGTTCCACACTTCAAAA+AGG | 0.373914 | 8:+78391150 | None:intergenic |
| TGCAATGTATCTTGATCAAA+AGG | 0.379781 | 8:-78392522 | MsG0880046800.01.T04:CDS |
| CCACAAACCTTCTGTCTTGA+CGG | 0.384995 | 8:+78391722 | None:intergenic |
| GTTGAAATTTGTGATGTGTT+GGG | 0.387926 | 8:-78392236 | MsG0880046800.01.T03:CDS |
| ACAGCTTGCATTGTTCCATC+TGG | 0.393155 | 8:+78391417 | None:intergenic |
| ATATGTGCAAATAGCAGAAA+TGG | 0.394136 | 8:-78391346 | MsG0880046800.01.T03:CDS |
| GACGCCGATTCTTGCTTTGC+CGG | 0.395013 | 8:-78391442 | MsG0880046800.01.T03:CDS |
| TCGAAACAGAAGGCTGATTT+GGG | 0.400505 | 8:-78391594 | MsG0880046800.01.T03:CDS |
| GAAGCAGCACTTGCTTGTTC+AGG | 0.406680 | 8:-78391319 | MsG0880046800.01.T03:CDS |
| ACCTCATTGATATCTGCTTC+TGG | 0.407260 | 8:+78391936 | None:intergenic |
| CTGAAATAGGGAAAGCAGAT+TGG | 0.410553 | 8:-78391650 | MsG0880046800.01.T03:CDS |
| TCAGCTTTCATTTCCCTCAC+AGG | 0.417821 | 8:+78392398 | None:intergenic |
| CTTGCTTTGCCGGCTCCAGA+TGG | 0.419646 | 8:-78391432 | MsG0880046800.01.T03:CDS |
| GACACTTGAGGGTTTCTTGA+AGG | 0.419795 | 8:-78392030 | MsG0880046800.01.T03:CDS |
| ATGGTGCTGCTAAGAATAAT+AGG | 0.420414 | 8:-78392310 | MsG0880046800.01.T03:CDS |
| TTCCAAAATGATGGATGAAT+TGG | 0.426253 | 8:-78392141 | MsG0880046800.01.T03:CDS |
| GTCGCACTCTTACCAATTCC+AGG | 0.429182 | 8:+78391462 | None:intergenic |
| AGACACCGGCGGCTGAAATA+GGG | 0.430463 | 8:-78391662 | MsG0880046800.01.T03:CDS |
| TGTTGAAATTTGTGATGTGT+TGG | 0.434833 | 8:-78392237 | MsG0880046800.01.T03:CDS |
| ATGCCACAATTTGGTGGGAT+TGG | 0.436110 | 8:-78391198 | MsG0880046800.01.T03:CDS |
| CAGCTTTCATTTCCCTCACA+GGG | 0.437925 | 8:+78392399 | None:intergenic |
| TAAAACTATCCCTCACAATC+TGG | 0.438866 | 8:+78392267 | None:intergenic |
| GGCATTCCATAACTCATCAT+AGG | 0.441011 | 8:+78391216 | None:intergenic |
| TGAGGCTCATTCTAGTTCTT+GGG | 0.441565 | 8:-78392570 | MsG0880046800.01.T04:CDS |
| GATGGATAGGTTTATGGAAA+TGG | 0.444981 | 8:-78392207 | MsG0880046800.01.T03:CDS |
| TTGAAATTTGTGATGTGTTG+GGG | 0.446185 | 8:-78392235 | MsG0880046800.01.T03:CDS |
| TTTGATTCACTTGTATTGAA+TGG | 0.446884 | 8:-78391564 | MsG0880046800.01.T03:CDS |
| ACAGACAGTGATGCTGCAAA+TGG | 0.448668 | 8:+78391381 | None:intergenic |
| TGTTAGTGCTTCCAAAATGA+TGG | 0.451763 | 8:-78392150 | MsG0880046800.01.T03:CDS |
| TGAAAAGTGTTGTTGAATCT+GGG | 0.452173 | 8:-78392472 | MsG0880046800.01.T04:CDS |
| ACAGGAGGTTGTTGCGGTCG+AGG | 0.455057 | 8:+78391876 | None:intergenic |
| AGTGTGGCATTACCTGGAAT+TGG | 0.461532 | 8:-78391474 | MsG0880046800.01.T03:CDS |
| AAATTCTTCACCTCAGGCGC+TGG | 0.463279 | 8:+78391903 | None:intergenic |
| TCACAACCTATGATGAGTTA+TGG | 0.465190 | 8:-78391222 | MsG0880046800.01.T03:CDS |
| TCTGCTATTTGCACATATGA+AGG | 0.468165 | 8:+78391351 | None:intergenic |
| TGGCAGCAATATGGGAGAGA+TGG | 0.469904 | 8:-78391285 | MsG0880046800.01.T03:CDS |
| CCGTCAAGACAGAAGGTTTG+TGG | 0.470020 | 8:-78391722 | MsG0880046800.01.T03:intron |
| TCTAGTTCTTGGGATCATGC+TGG | 0.471723 | 8:-78392560 | MsG0880046800.01.T04:CDS |
| GCTAGTAGTGTGGCATTACC+TGG | 0.474130 | 8:-78391480 | MsG0880046800.01.T03:CDS |
| GGTGTTAAATTCTTCACCTC+AGG | 0.474870 | 8:+78391897 | None:intergenic |
| TTAACCTCCAACCTCTTCTC+AGG | 0.483672 | 8:+78391984 | None:intergenic |
| TCTTTAGGCTGCGGAGCCAC+AGG | 0.488305 | 8:+78391858 | None:intergenic |
| CAGAAGGCTGATTTGGGAGG+TGG | 0.489303 | 8:-78391588 | MsG0880046800.01.T03:CDS |
| TGAAATAGGGAAAGCAGATT+GGG | 0.491972 | 8:-78391649 | MsG0880046800.01.T03:CDS |
| TGCATTGTTCCATCTGGAGC+CGG | 0.496842 | 8:+78391423 | None:intergenic |
| CAAGTGGGTTTAACAAGGGT+TGG | 0.502262 | 8:-78391252 | MsG0880046800.01.T03:CDS |
| GGTTTAACAAGGGTTGGAGC+TGG | 0.502377 | 8:-78391246 | MsG0880046800.01.T03:CDS |
| TATGGTTGGTGTAAGGATAT+GGG | 0.503323 | 8:-78392110 | MsG0880046800.01.T03:CDS |
| AGGCTTCTATGGTTGGTGTA+AGG | 0.509267 | 8:-78392117 | MsG0880046800.01.T03:CDS |
| AATTGGCAGGCTTCTATGGT+TGG | 0.517810 | 8:-78392124 | MsG0880046800.01.T03:CDS |
| GGCAGCAATATGGGAGAGAT+GGG | 0.520420 | 8:-78391284 | MsG0880046800.01.T03:CDS |
| ACAAGGCAATAAATTTGCAT+TGG | 0.521522 | 8:-78391766 | MsG0880046800.01.T03:CDS |
| CAGACAGTGATGCTGCAAAT+GGG | 0.527554 | 8:+78391382 | None:intergenic |
| GCTTTCCCTATTTCAGCCGC+CGG | 0.527983 | 8:+78391657 | None:intergenic |
| AGCAGATTGGGAATTAGCAT+TGG | 0.530343 | 8:-78391637 | MsG0880046800.01.T03:CDS |
| CGAGGAGTTTCTTTAGGCTG+CGG | 0.535656 | 8:+78391849 | None:intergenic |
| GGAGCCGGCAAAGCAAGAAT+CGG | 0.539183 | 8:+78391438 | None:intergenic |
| AGATTGGGAATTAGCATTGG+TGG | 0.546066 | 8:-78391634 | MsG0880046800.01.T03:CDS |
| AAGGTCAAGTGGGTTTAACA+AGG | 0.546870 | 8:-78391257 | MsG0880046800.01.T03:CDS |
| GAAGGCTCTTCCAGCGCCTG+AGG | 0.551250 | 8:-78391913 | MsG0880046800.01.T03:CDS |
| TATGGAATGCCACAATTTGG+TGG | 0.551750 | 8:-78391204 | MsG0880046800.01.T03:CDS |
| AAAGAGTCCTGAGAAGAGGT+TGG | 0.551868 | 8:-78391991 | MsG0880046800.01.T03:CDS |
| TAAGAATAATAGGTTAGTGT+TGG | 0.553267 | 8:-78392300 | MsG0880046800.01.T03:CDS |
| ATGGAATGCCACAATTTGGT+GGG | 0.554732 | 8:-78391203 | MsG0880046800.01.T03:CDS |
| GAACAAAGAGTCCTGAGAAG+AGG | 0.555312 | 8:-78391995 | MsG0880046800.01.T03:CDS |
| CGTCAAGACAGAAGGTTTGT+GGG | 0.556434 | 8:-78391721 | MsG0880046800.01.T03:intron |
| AGCAGATATCAATGAGGTGA+AGG | 0.562071 | 8:-78391931 | MsG0880046800.01.T03:CDS |
| AGATGGGATGCAAGGTCAAG+TGG | 0.567578 | 8:-78391268 | MsG0880046800.01.T03:CDS |
| TGGTTCTGTGAAGAAGAATG+AGG | 0.569960 | 8:-78392438 | MsG0880046800.01.T04:CDS |
| TTTGGTGGGATTGGACAACC+TGG | 0.572922 | 8:-78391189 | MsG0880046800.01.T03:CDS |
| GCTTCGACCGTCAAGACAGA+AGG | 0.573026 | 8:-78391729 | MsG0880046800.01.T03:intron |
| GGTGCATTGTAGTAGCCTCC+AGG | 0.576934 | 8:+78391171 | None:intergenic |
| CCTCGTGTTCAACAAGAGAC+AGG | 0.580723 | 8:-78391831 | MsG0880046800.01.T03:CDS |
| TGAAATTTGTGATGTGTTGG+GGG | 0.582206 | 8:-78392234 | MsG0880046800.01.T03:CDS |
| TAGTAATCTGTCGAAACAGA+AGG | 0.582861 | 8:-78391604 | MsG0880046800.01.T03:CDS |
| AAAATGATGGATGAATTGGC+AGG | 0.583427 | 8:-78392137 | MsG0880046800.01.T03:CDS |
| TGCAAATAGCAGAAATGGAG+AGG | 0.586410 | 8:-78391341 | MsG0880046800.01.T03:CDS |
| GACTTCAGCATGGCAGACAC+CGG | 0.586939 | 8:-78391676 | MsG0880046800.01.T03:CDS |
| CTGCCATGCTGAAGTCACTT+CGG | 0.587835 | 8:+78391683 | None:intergenic |
| TTGAATGGAATGTATGATCA+AGG | 0.590955 | 8:-78391549 | MsG0880046800.01.T03:CDS |
| AAATGATGCTACCCCTGTGA+GGG | 0.591720 | 8:-78392411 | MsG0880046800.01.T04:CDS |
| TGTCCAATCCCACCAAATTG+TGG | 0.594722 | 8:+78391195 | None:intergenic |
| TTGCGATTTACCAGATTGTG+AGG | 0.594904 | 8:-78392277 | MsG0880046800.01.T03:CDS |
| GAGTCCTGAGAAGAGGTTGG+AGG | 0.595271 | 8:-78391988 | MsG0880046800.01.T03:CDS |
| GTAAGGATATGGGTATTGCT+AGG | 0.595941 | 8:-78392100 | MsG0880046800.01.T03:CDS |
| CCTGTCTCTTGTTGAACACG+AGG | 0.596634 | 8:+78391831 | None:intergenic |
| TTAGGCTGCGGAGCCACAGG+AGG | 0.598625 | 8:+78391861 | None:intergenic |
| AGCACTAACATAAAACTCAA+AGG | 0.600537 | 8:+78392163 | None:intergenic |
| TATGGGAGAGATGGGATGCA+AGG | 0.609305 | 8:-78391276 | MsG0880046800.01.T03:CDS |
| GATGGAACAATGCAAGCTGT+AGG | 0.610741 | 8:-78391414 | MsG0880046800.01.T03:CDS |
| TGCGATTTACCAGATTGTGA+GGG | 0.612559 | 8:-78392276 | MsG0880046800.01.T03:CDS |
| GAGGGAAATGAAAGCTGAGA+GGG | 0.612777 | 8:-78392393 | MsG0880046800.01.T04:CDS |
| ATTTGCACATATGAAGGTGG+CGG | 0.616726 | 8:+78391357 | None:intergenic |
| TCGACCGCAACAACCTCCTG+TGG | 0.619993 | 8:-78391874 | MsG0880046800.01.T03:CDS |
| GGTGTTTCAGCTGATGAACA+AGG | 0.621449 | 8:-78391783 | MsG0880046800.01.T03:CDS |
| GAAAAGTGTTGTTGAATCTG+GGG | 0.630815 | 8:-78392471 | MsG0880046800.01.T04:CDS |
| GCTATTTGCACATATGAAGG+TGG | 0.631483 | 8:+78391354 | None:intergenic |
| TTCAGCATGGCAGACACCGG+CGG | 0.632626 | 8:-78391673 | MsG0880046800.01.T03:CDS |
| TGGTGGGAGTGCTAGTAGTG+TGG | 0.638295 | 8:-78391490 | MsG0880046800.01.T03:CDS |
| AGCACAACTGAGGTGAGTGG+TGG | 0.638502 | 8:-78391507 | MsG0880046800.01.T03:CDS |
| GATGGGATGCAAGGTCAAGT+GGG | 0.639308 | 8:-78391267 | MsG0880046800.01.T03:CDS |
| AAACAGAAGGCTGATTTGGG+AGG | 0.641181 | 8:-78391591 | MsG0880046800.01.T03:CDS |
| AGGTCAAGTGGGTTTAACAA+GGG | 0.654548 | 8:-78391256 | MsG0880046800.01.T03:CDS |
| GGAGCCACAGGAGGTTGTTG+CGG | 0.659960 | 8:+78391870 | None:intergenic |
| CTGCACTTCAGGGTACTCAG+AGG | 0.671672 | 8:+78392076 | None:intergenic |
| AATGCAAGCTGTAGGAACGC+AGG | 0.672904 | 8:-78391406 | MsG0880046800.01.T03:CDS |
| GCACAACTGAGGTGAGTGGT+GGG | 0.673965 | 8:-78391506 | MsG0880046800.01.T03:CDS |
| TTAGTGAACCTTAGAGACGA+TGG | 0.680919 | 8:-78391804 | MsG0880046800.01.T03:CDS |
| AAAATGATGCTACCCCTGTG+AGG | 0.683408 | 8:-78392412 | MsG0880046800.01.T04:CDS |
| AGCTTTCATTTCCCTCACAG+GGG | 0.685348 | 8:+78392400 | None:intergenic |
| CATCCGAAGTGACTTCAGCA+TGG | 0.685535 | 8:-78391686 | MsG0880046800.01.T03:intron |
| TGAGGGAAATGAAAGCTGAG+AGG | 0.694516 | 8:-78392394 | MsG0880046800.01.T04:CDS |
| TTATTCTTAGCAGCACCATG+TGG | 0.695497 | 8:+78392314 | None:intergenic |
| GGTGGGATTGGACAACCTGG+AGG | 0.697071 | 8:-78391186 | MsG0880046800.01.T03:CDS |
| GCCAGAAGCAGATATCAATG+AGG | 0.701216 | 8:-78391937 | MsG0880046800.01.T03:CDS |
| GTATTAGGTTGTAAACCACA+TGG | 0.701935 | 8:-78392329 | MsG0880046800.01.T03:CDS |
| GTGAGCACAACTGAGGTGAG+TGG | 0.742823 | 8:-78391510 | MsG0880046800.01.T03:CDS |
| GTGGTTTACAACCTAATACG+CGG | 0.755539 | 8:+78392333 | None:intergenic |
| ACAACATGTGAGCACAACTG+AGG | 0.771312 | 8:-78391517 | MsG0880046800.01.T03:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAGAATAATAGGTTAGTGT+TGG | - | Chr8:78391466-78391485 | MsG0880046800.01.T03:CDS | 25.0% |
| ! | TTTGATTCACTTGTATTGAA+TGG | - | Chr8:78392202-78392221 | MsG0880046800.01.T03:CDS | 25.0% |
| !! | TGATCAAAAGGTTGAATTTT+TGG | - | Chr8:78391256-78391275 | MsG0880046800.01.T03:CDS | 25.0% |
| AACAATTATGGCAGCAATAT+GGG | - | Chr8:78392473-78392492 | MsG0880046800.01.T04:CDS | 30.0% | |
| ACAAGGCAATAAATTTGCAT+TGG | - | Chr8:78392000-78392019 | MsG0880046800.01.T03:CDS | 30.0% | |
| AGCACTAACATAAAACTCAA+AGG | + | Chr8:78391606-78391625 | None:intergenic | 30.0% | |
| ATATGTGCAAATAGCAGAAA+TGG | - | Chr8:78392420-78392439 | MsG0880046800.01.T04:CDS | 30.0% | |
| GTTGAAATTTGTGATGTGTT+GGG | - | Chr8:78391530-78391549 | MsG0880046800.01.T03:CDS | 30.0% | |
| TGCAATGTATCTTGATCAAA+AGG | - | Chr8:78391244-78391263 | MsG0880046800.01.T03:CDS | 30.0% | |
| TGTTGAAATTTGTGATGTGT+TGG | - | Chr8:78391529-78391548 | MsG0880046800.01.T03:CDS | 30.0% | |
| TTGAAATTTGTGATGTGTTG+GGG | - | Chr8:78391531-78391550 | MsG0880046800.01.T03:CDS | 30.0% | |
| TTGAATGGAATGTATGATCA+AGG | - | Chr8:78392217-78392236 | MsG0880046800.01.T03:CDS | 30.0% | |
| TTGTTCAGGAACAACAATTA+TGG | - | Chr8:78392461-78392480 | MsG0880046800.01.T04:CDS | 30.0% | |
| ! | AAAATCACTGACAGTCTTTT+AGG | - | Chr8:78391713-78391732 | MsG0880046800.01.T03:intron | 30.0% |
| ! | AAATCACTGACAGTCTTTTA+GGG | - | Chr8:78391714-78391733 | MsG0880046800.01.T03:intron | 30.0% |
| !! | TATGAGTGATTTTAGAGATG+AGG | - | Chr8:78391178-78391197 | MsG0880046800.01.T03:CDS | 30.0% |
| !! | TGAAAAGTGTTGTTGAATCT+GGG | - | Chr8:78391294-78391313 | MsG0880046800.01.T03:CDS | 30.0% |
| !! | TTCCAAAATGATGGATGAAT+TGG | - | Chr8:78391625-78391644 | MsG0880046800.01.T03:CDS | 30.0% |
| !! | TTGAAAAGTGTTGTTGAATC+TGG | - | Chr8:78391293-78391312 | MsG0880046800.01.T03:CDS | 30.0% |
| AGTTATGGAATGCCACAATT+TGG | - | Chr8:78392559-78392578 | MsG0880046800.01.T04:CDS | 35.0% | |
| CAACAATTATGGCAGCAATA+TGG | - | Chr8:78392472-78392491 | MsG0880046800.01.T04:CDS | 35.0% | |
| GATGGATAGGTTTATGGAAA+TGG | - | Chr8:78391559-78391578 | MsG0880046800.01.T03:CDS | 35.0% | |
| TAAAACTATCCCTCACAATC+TGG | + | Chr8:78391502-78391521 | None:intergenic | 35.0% | |
| TAGTAATCTGTCGAAACAGA+AGG | - | Chr8:78392162-78392181 | MsG0880046800.01.T03:CDS | 35.0% | |
| TCACAACCTATGATGAGTTA+TGG | - | Chr8:78392544-78392563 | MsG0880046800.01.T04:CDS | 35.0% | |
| TGAAATAGGGAAAGCAGATT+GGG | - | Chr8:78392117-78392136 | MsG0880046800.01.T03:CDS | 35.0% | |
| TGAAATTTGTGATGTGTTGG+GGG | - | Chr8:78391532-78391551 | MsG0880046800.01.T03:CDS | 35.0% | |
| TGTTAGTGCTTCCAAAATGA+TGG | - | Chr8:78391616-78391635 | MsG0880046800.01.T03:CDS | 35.0% | |
| ! | GTATTAGGTTGTAAACCACA+TGG | - | Chr8:78391437-78391456 | MsG0880046800.01.T03:CDS | 35.0% |
| ! | TATGGTTGGTGTAAGGATAT+GGG | - | Chr8:78391656-78391675 | MsG0880046800.01.T03:CDS | 35.0% |
| ! | TCTGCTATTTGCACATATGA+AGG | + | Chr8:78392418-78392437 | None:intergenic | 35.0% |
| ! | TGCCAATTCATCCATCATTT+TGG | + | Chr8:78391630-78391649 | None:intergenic | 35.0% |
| !! | AAAATGATGGATGAATTGGC+AGG | - | Chr8:78391629-78391648 | MsG0880046800.01.T03:CDS | 35.0% |
| !! | ATGGTGCTGCTAAGAATAAT+AGG | - | Chr8:78391456-78391475 | MsG0880046800.01.T03:CDS | 35.0% |
| !! | GAAAAGTGTTGTTGAATCTG+GGG | - | Chr8:78391295-78391314 | MsG0880046800.01.T03:CDS | 35.0% |
| !! | TTTGCATTGGCATTGTTTTC+TGG | - | Chr8:78392013-78392032 | MsG0880046800.01.T03:CDS | 35.0% |
| ACCTCATTGATATCTGCTTC+TGG | + | Chr8:78391833-78391852 | None:intergenic | 40.0% | |
| AGCAGATATCAATGAGGTGA+AGG | - | Chr8:78391835-78391854 | MsG0880046800.01.T03:CDS | 40.0% | |
| AGCAGATTGGGAATTAGCAT+TGG | - | Chr8:78392129-78392148 | MsG0880046800.01.T03:CDS | 40.0% | |
| ATGGAATGCCACAATTTGGT+GGG | - | Chr8:78392563-78392582 | MsG0880046800.01.T04:CDS | 40.0% | |
| ATTTGCACATATGAAGGTGG+CGG | + | Chr8:78392412-78392431 | None:intergenic | 40.0% | |
| CTGAAATAGGGAAAGCAGAT+TGG | - | Chr8:78392116-78392135 | MsG0880046800.01.T03:CDS | 40.0% | |
| GAAGGTTTGTGGGAAGAATT+TGG | - | Chr8:78392055-78392074 | MsG0880046800.01.T03:CDS | 40.0% | |
| GCTATTTGCACATATGAAGG+TGG | + | Chr8:78392415-78392434 | None:intergenic | 40.0% | |
| GGCATTCCATAACTCATCAT+AGG | + | Chr8:78392553-78392572 | None:intergenic | 40.0% | |
| GGTGTTAAATTCTTCACCTC+AGG | + | Chr8:78391872-78391891 | None:intergenic | 40.0% | |
| GTGGTTTACAACCTAATACG+CGG | + | Chr8:78391436-78391455 | None:intergenic | 40.0% | |
| TATGGAATGCCACAATTTGG+TGG | - | Chr8:78392562-78392581 | MsG0880046800.01.T04:CDS | 40.0% | |
| TGAACACGAGGAGTTTCTTT+AGG | + | Chr8:78391926-78391945 | None:intergenic | 40.0% | |
| TGCAAATAGCAGAAATGGAG+AGG | - | Chr8:78392425-78392444 | MsG0880046800.01.T04:CDS | 40.0% | |
| TGCGATTTACCAGATTGTGA+GGG | - | Chr8:78391490-78391509 | MsG0880046800.01.T03:CDS | 40.0% | |
| TTAGTGAACCTTAGAGACGA+TGG | - | Chr8:78391962-78391981 | MsG0880046800.01.T03:CDS | 40.0% | |
| TTATTCTTAGCAGCACCATG+TGG | + | Chr8:78391455-78391474 | None:intergenic | 40.0% | |
| TTGCGATTTACCAGATTGTG+AGG | - | Chr8:78391489-78391508 | MsG0880046800.01.T03:CDS | 40.0% | |
| ! | AAGGTCAAGTGGGTTTAACA+AGG | - | Chr8:78392509-78392528 | MsG0880046800.01.T04:CDS | 40.0% |
| ! | AATGAAAGCTGAGAGGGTTT+TGG | - | Chr8:78391379-78391398 | MsG0880046800.01.T03:CDS | 40.0% |
| ! | AGATTGGGAATTAGCATTGG+TGG | - | Chr8:78392132-78392151 | MsG0880046800.01.T03:CDS | 40.0% |
| ! | AGGTCAAGTGGGTTTAACAA+GGG | - | Chr8:78392510-78392529 | MsG0880046800.01.T04:CDS | 40.0% |
| ! | CAGTGATTTTCTGCACTTCA+GGG | + | Chr8:78391703-78391722 | None:intergenic | 40.0% |
| ! | CTATGGTTGGTGTAAGGATA+TGG | - | Chr8:78391655-78391674 | MsG0880046800.01.T03:CDS | 40.0% |
| ! | GTAAGGATATGGGTATTGCT+AGG | - | Chr8:78391666-78391685 | MsG0880046800.01.T03:CDS | 40.0% |
| ! | TCAGTGATTTTCTGCACTTC+AGG | + | Chr8:78391704-78391723 | None:intergenic | 40.0% |
| ! | TCGAAACAGAAGGCTGATTT+GGG | - | Chr8:78392172-78392191 | MsG0880046800.01.T03:CDS | 40.0% |
| ! | TGGTTCTGTGAAGAAGAATG+AGG | - | Chr8:78391328-78391347 | MsG0880046800.01.T03:CDS | 40.0% |
| !! | AGTCTTTTAGGGACACTTGA+GGG | - | Chr8:78391725-78391744 | MsG0880046800.01.T03:intron | 40.0% |
| !! | ATGAGGCTCATTCTAGTTCT+TGG | - | Chr8:78391195-78391214 | MsG0880046800.01.T03:CDS | 40.0% |
| !! | GGTGTTGATGGATAGGTTTA+TGG | - | Chr8:78391553-78391572 | MsG0880046800.01.T03:CDS | 40.0% |
| !! | TGAGGCTCATTCTAGTTCTT+GGG | - | Chr8:78391196-78391215 | MsG0880046800.01.T03:CDS | 40.0% |
| !!! | GGATCATGCTGGTTTTGTTA+GGG | - | Chr8:78391217-78391236 | MsG0880046800.01.T03:CDS | 40.0% |
| AAAATGATGCTACCCCTGTG+AGG | - | Chr8:78391354-78391373 | MsG0880046800.01.T03:CDS | 45.0% | |
| AAAGAGTCCTGAGAAGAGGT+TGG | - | Chr8:78391775-78391794 | MsG0880046800.01.T03:CDS | 45.0% | |
| AAATGATGCTACCCCTGTGA+GGG | - | Chr8:78391355-78391374 | MsG0880046800.01.T03:CDS | 45.0% | |
| AATTGGCAGGCTTCTATGGT+TGG | - | Chr8:78391642-78391661 | MsG0880046800.01.T03:CDS | 45.0% | |
| ACAACATGTGAGCACAACTG+AGG | - | Chr8:78392249-78392268 | MsG0880046800.01.T03:CDS | 45.0% | |
| ACAGACAGTGATGCTGCAAA+TGG | + | Chr8:78392388-78392407 | None:intergenic | 45.0% | |
| ACAGCTTGCATTGTTCCATC+TGG | + | Chr8:78392352-78392371 | None:intergenic | 45.0% | |
| AGCTTTCATTTCCCTCACAG+GGG | + | Chr8:78391369-78391388 | None:intergenic | 45.0% | |
| AGTGTGGCATTACCTGGAAT+TGG | - | Chr8:78392292-78392311 | MsG0880046800.01.T03:CDS | 45.0% | |
| CAAATTCTCGACCGCGTATT+AGG | - | Chr8:78391422-78391441 | MsG0880046800.01.T03:CDS | 45.0% | |
| CAGACAGTGATGCTGCAAAT+GGG | + | Chr8:78392387-78392406 | None:intergenic | 45.0% | |
| CAGCTTTCATTTCCCTCACA+GGG | + | Chr8:78391370-78391389 | None:intergenic | 45.0% | |
| CCACAAACCTTCTGTCTTGA+CGG | + | Chr8:78392047-78392066 | None:intergenic | 45.0% | |
| CGTCAAGACAGAAGGTTTGT+GGG | - | Chr8:78392045-78392064 | MsG0880046800.01.T03:CDS | 45.0% | |
| CTGAAACACCATCGTCTCTA+AGG | + | Chr8:78391973-78391992 | None:intergenic | 45.0% | |
| GAACAAAGAGTCCTGAGAAG+AGG | - | Chr8:78391771-78391790 | MsG0880046800.01.T03:CDS | 45.0% | |
| GAATCTGGGGATGCTGAATT+TGG | - | Chr8:78391308-78391327 | MsG0880046800.01.T03:CDS | 45.0% | |
| GACACTTGAGGGTTTCTTGA+AGG | - | Chr8:78391736-78391755 | MsG0880046800.01.T03:CDS | 45.0% | |
| GAGGGAAATGAAAGCTGAGA+GGG | - | Chr8:78391373-78391392 | MsG0880046800.01.T03:CDS | 45.0% | |
| GATGAATTGGCAGGCTTCTA+TGG | - | Chr8:78391638-78391657 | MsG0880046800.01.T03:CDS | 45.0% | |
| GATGGAACAATGCAAGCTGT+AGG | - | Chr8:78392352-78392371 | MsG0880046800.01.T03:CDS | 45.0% | |
| GCCAGAAGCAGATATCAATG+AGG | - | Chr8:78391829-78391848 | MsG0880046800.01.T03:CDS | 45.0% | |
| GGTGTTTCAGCTGATGAACA+AGG | - | Chr8:78391983-78392002 | MsG0880046800.01.T03:CDS | 45.0% | |
| GTCGAAACAGAAGGCTGATT+TGG | - | Chr8:78392171-78392190 | MsG0880046800.01.T03:CDS | 45.0% | |
| TCAGCTTTCATTTCCCTCAC+AGG | + | Chr8:78391371-78391390 | None:intergenic | 45.0% | |
| TGAGAAGAGGTTGGAGGTTA+AGG | - | Chr8:78391784-78391803 | MsG0880046800.01.T03:CDS | 45.0% | |
| TGAGGGAAATGAAAGCTGAG+AGG | - | Chr8:78391372-78391391 | MsG0880046800.01.T03:CDS | 45.0% | |
| TGTCCAATCCCACCAAATTG+TGG | + | Chr8:78392574-78392593 | None:intergenic | 45.0% | |
| TTAACCTCCAACCTCTTCTC+AGG | + | Chr8:78391785-78391804 | None:intergenic | 45.0% | |
| ! | AGGCTTCTATGGTTGGTGTA+AGG | - | Chr8:78391649-78391668 | MsG0880046800.01.T03:CDS | 45.0% |
| ! | ATGCCACAATTTGGTGGGAT+TGG | - | Chr8:78392568-78392587 | MsG0880046800.01.T04:CDS | 45.0% |
| ! | CAAGTGGGTTTAACAAGGGT+TGG | - | Chr8:78392514-78392533 | MsG0880046800.01.T04:CDS | 45.0% |
| !! | AAACAGAAGGCTGATTTGGG+AGG | - | Chr8:78392175-78392194 | MsG0880046800.01.T03:CDS | 45.0% |
| !! | CAGTCTTTTAGGGACACTTG+AGG | - | Chr8:78391724-78391743 | MsG0880046800.01.T03:intron | 45.0% |
| !! | TCTAGTTCTTGGGATCATGC+TGG | - | Chr8:78391206-78391225 | MsG0880046800.01.T03:CDS | 45.0% |
| !!! | AAGCTGAGAGGGTTTTGGAT+AGG | - | Chr8:78391384-78391403 | MsG0880046800.01.T03:CDS | 45.0% |
| !!! | GGGATCATGCTGGTTTTGTT+AGG | - | Chr8:78391216-78391235 | MsG0880046800.01.T03:CDS | 45.0% |
| AAATTCTTCACCTCAGGCGC+TGG | + | Chr8:78391866-78391885 | None:intergenic | 50.0% | |
| AATGCAAGCTGTAGGAACGC+AGG | - | Chr8:78392360-78392379 | MsG0880046800.01.T03:CDS | 50.0% | |
| AGATGGGATGCAAGGTCAAG+TGG | - | Chr8:78392498-78392517 | MsG0880046800.01.T04:CDS | 50.0% | |
| CATCCGAAGTGACTTCAGCA+TGG | - | Chr8:78392080-78392099 | MsG0880046800.01.T03:CDS | 50.0% | |
| CCGTCAAGACAGAAGGTTTG+TGG | - | Chr8:78392044-78392063 | MsG0880046800.01.T03:CDS | 50.0% | |
| CCTCGTGTTCAACAAGAGAC+AGG | - | Chr8:78391935-78391954 | MsG0880046800.01.T03:CDS | 50.0% | |
| CCTGTCTCTTGTTGAACACG+AGG | + | Chr8:78391938-78391957 | None:intergenic | 50.0% | |
| CGAGGAGTTTCTTTAGGCTG+CGG | + | Chr8:78391920-78391939 | None:intergenic | 50.0% | |
| CTGCCATGCTGAAGTCACTT+CGG | + | Chr8:78392086-78392105 | None:intergenic | 50.0% | |
| GAAGCAGCACTTGCTTGTTC+AGG | - | Chr8:78392447-78392466 | MsG0880046800.01.T04:CDS | 50.0% | |
| GATGGGATGCAAGGTCAAGT+GGG | - | Chr8:78392499-78392518 | MsG0880046800.01.T04:CDS | 50.0% | |
| GCTAGTAGTGTGGCATTACC+TGG | - | Chr8:78392286-78392305 | MsG0880046800.01.T03:CDS | 50.0% | |
| GGCAGCAATATGGGAGAGAT+GGG | - | Chr8:78392482-78392501 | MsG0880046800.01.T04:CDS | 50.0% | |
| GGTTTAACAAGGGTTGGAGC+TGG | - | Chr8:78392520-78392539 | MsG0880046800.01.T04:CDS | 50.0% | |
| GTCGCACTCTTACCAATTCC+AGG | + | Chr8:78392307-78392326 | None:intergenic | 50.0% | |
| TATGGGAGAGATGGGATGCA+AGG | - | Chr8:78392490-78392509 | MsG0880046800.01.T04:CDS | 50.0% | |
| TGGCAGCAATATGGGAGAGA+TGG | - | Chr8:78392481-78392500 | MsG0880046800.01.T04:CDS | 50.0% | |
| TTTGGTGGGATTGGACAACC+TGG | - | Chr8:78392577-78392596 | MsG0880046800.01.T04:CDS | 50.0% | |
| ! | TGCATTGTTCCATCTGGAGC+CGG | + | Chr8:78392346-78392365 | None:intergenic | 50.0% |
| !! | TGATGTGTTGGGGGTGTTGA+TGG | - | Chr8:78391541-78391560 | MsG0880046800.01.T03:CDS | 50.0% |
| !! | TGTTGGGGGTGTTGATGGAT+AGG | - | Chr8:78391546-78391565 | MsG0880046800.01.T03:CDS | 50.0% |
| AGACACCGGCGGCTGAAATA+GGG | - | Chr8:78392104-78392123 | MsG0880046800.01.T03:CDS | 55.0% | |
| AGCACAACTGAGGTGAGTGG+TGG | - | Chr8:78392259-78392278 | MsG0880046800.01.T03:CDS | 55.0% | |
| GACTTCAGCATGGCAGACAC+CGG | - | Chr8:78392090-78392109 | MsG0880046800.01.T03:CDS | 55.0% | |
| GAGTCCTGAGAAGAGGTTGG+AGG | - | Chr8:78391778-78391797 | MsG0880046800.01.T03:CDS | 55.0% | |
| GCACAACTGAGGTGAGTGGT+GGG | - | Chr8:78392260-78392279 | MsG0880046800.01.T03:CDS | 55.0% | |
| GCTTCGACCGTCAAGACAGA+AGG | - | Chr8:78392037-78392056 | MsG0880046800.01.T03:CDS | 55.0% | |
| GCTTTCCCTATTTCAGCCGC+CGG | + | Chr8:78392112-78392131 | None:intergenic | 55.0% | |
| GGAGCCGGCAAAGCAAGAAT+CGG | + | Chr8:78392331-78392350 | None:intergenic | 55.0% | |
| GGTGCATTGTAGTAGCCTCC+AGG | + | Chr8:78392598-78392617 | None:intergenic | 55.0% | |
| GTGAGCACAACTGAGGTGAG+TGG | - | Chr8:78392256-78392275 | MsG0880046800.01.T03:CDS | 55.0% | |
| ! | CTGCACTTCAGGGTACTCAG+AGG | + | Chr8:78391693-78391712 | None:intergenic | 55.0% |
| !! | CAGAAGGCTGATTTGGGAGG+TGG | - | Chr8:78392178-78392197 | MsG0880046800.01.T03:CDS | 55.0% |
| !! | GACGCCGATTCTTGCTTTGC+CGG | - | Chr8:78392324-78392343 | MsG0880046800.01.T03:CDS | 55.0% |
| !! | TGGTGGGAGTGCTAGTAGTG+TGG | - | Chr8:78392276-78392295 | MsG0880046800.01.T03:CDS | 55.0% |
| ACAGGAGGTTGTTGCGGTCG+AGG | + | Chr8:78391893-78391912 | None:intergenic | 60.0% | |
| CAGACACCGGCGGCTGAAAT+AGG | - | Chr8:78392103-78392122 | MsG0880046800.01.T03:CDS | 60.0% | |
| GGAGCCACAGGAGGTTGTTG+CGG | + | Chr8:78391899-78391918 | None:intergenic | 60.0% | |
| GGTGGGATTGGACAACCTGG+AGG | - | Chr8:78392580-78392599 | MsG0880046800.01.T04:CDS | 60.0% | |
| TCGACCGCAACAACCTCCTG+TGG | - | Chr8:78391892-78391911 | MsG0880046800.01.T03:CDS | 60.0% | |
| TCTTTAGGCTGCGGAGCCAC+AGG | + | Chr8:78391911-78391930 | None:intergenic | 60.0% | |
| TTCAGCATGGCAGACACCGG+CGG | - | Chr8:78392093-78392112 | MsG0880046800.01.T03:CDS | 60.0% | |
| !! | CTTGCTTTGCCGGCTCCAGA+TGG | - | Chr8:78392334-78392353 | MsG0880046800.01.T03:CDS | 60.0% |
| GAAGGCTCTTCCAGCGCCTG+AGG | - | Chr8:78391853-78391872 | MsG0880046800.01.T03:CDS | 65.0% | |
| TTAGGCTGCGGAGCCACAGG+AGG | + | Chr8:78391908-78391927 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 78391164 | 78392624 | 78391164 | ID=MsG0880046800.01;Name=MsG0880046800.01 |
| Chr8 | mRNA | 78391164 | 78392408 | 78391164 | ID=MsG0880046800.01.T01;Parent=MsG0880046800.01;Name=MsG0880046800.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|0|0|3|0|394 |
| Chr8 | exon | 78391164 | 78391444 | 78391164 | ID=MsG0880046800.01.T01:exon:18786;Parent=MsG0880046800.01.T01 |
| Chr8 | exon | 78391475 | 78391699 | 78391475 | ID=MsG0880046800.01.T01:exon:18785;Parent=MsG0880046800.01.T01 |
| Chr8 | CDS | 78391730 | 78392408 | 78391730 | ID=MsG0880046800.01.T01:cds;Parent=MsG0880046800.01.T01 |
| Chr8 | CDS | 78391475 | 78391699 | 78391475 | ID=MsG0880046800.01.T01:cds;Parent=MsG0880046800.01.T01 |
| Chr8 | CDS | 78391164 | 78391444 | 78391164 | ID=MsG0880046800.01.T01:cds;Parent=MsG0880046800.01.T01 |
| Chr8 | mRNA | 78391164 | 78392624 | 78391164 | ID=MsG0880046800.01.T02;Parent=MsG0880046800.01;Name=MsG0880046800.01.T02;_AED=0.23;_eAED=0.24;_QI=0|0|0|1|0|0|2|0|476 |
| Chr8 | exon | 78391730 | 78392624 | 78391730 | ID=MsG0880046800.01.T02:exon:18787;Parent=MsG0880046800.01.T02 |
| Chr8 | CDS | 78391730 | 78392624 | 78391730 | ID=MsG0880046800.01.T02:cds;Parent=MsG0880046800.01.T02 |
| Chr8 | CDS | 78391164 | 78391699 | 78391164 | ID=MsG0880046800.01.T02:cds;Parent=MsG0880046800.01.T02 |
| Chr8 | mRNA | 78391164 | 78392408 | 78391164 | ID=MsG0880046800.01.T03;Parent=MsG0880046800.01;Name=MsG0880046800.01.T03;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|0|0|2|0|404 |
| Chr8 | CDS | 78391730 | 78392408 | 78391730 | ID=MsG0880046800.01.T03:cds;Parent=MsG0880046800.01.T03 |
| Chr8 | CDS | 78391164 | 78391699 | 78391164 | ID=MsG0880046800.01.T03:cds;Parent=MsG0880046800.01.T03 |
| Chr8 | mRNA | 78391164 | 78392624 | 78391164 | ID=MsG0880046800.01.T04;Parent=MsG0880046800.01;Name=MsG0880046800.01.T04;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|0|1|0|486 |
| Chr8 | exon | 78391164 | 78392624 | 78391164 | ID=MsG0880046800.01.T04:exon:18789;Parent=MsG0880046800.01.T04 |
| Chr8 | CDS | 78391164 | 78392624 | 78391164 | ID=MsG0880046800.01.T04:cds;Parent=MsG0880046800.01.T04 |
| Gene Sequence |
| Protein sequence |
