AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006061.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006061.01.T01 MTR_1g112840 98.992 397 4 0 221 617 1 397 0.0 819
MsG0180006061.01.T01 MTR_7g081020 81.654 387 71 0 226 612 1 387 0.0 644
MsG0180006061.01.T01 MTR_8g074930 75.258 388 94 1 221 608 1 386 0.0 609
MsG0180006061.01.T01 MTR_1g116260 68.033 366 109 2 232 597 13 370 0.0 522
MsG0180006061.01.T01 MTR_7g081020 82.178 303 54 0 226 528 1 303 1.54e-179 511
MsG0180006061.01.T01 MTR_7g100240 63.934 366 128 2 231 596 4 365 2.41e-164 474
MsG0180006061.01.T01 MTR_1g067210 61.290 372 141 2 228 597 1 371 1.45e-162 470
MsG0180006061.01.T01 MTR_2g033910 58.621 377 144 4 221 594 1 368 5.35e-159 461
MsG0180006061.01.T01 MTR_8g074930 77.007 274 63 0 335 608 1 274 1.09e-156 451
MsG0180006061.01.T01 MTR_0015s0140 53.927 382 157 5 221 595 1 370 3.12e-147 431
MsG0180006061.01.T01 MTR_1g106855 53.743 374 158 3 229 600 2 362 5.06e-140 412
MsG0180006061.01.T01 MTR_1g106855 53.642 302 125 3 229 528 2 290 3.04e-109 330
MsG0180006061.01.T01 MTR_0015s0140 55.755 278 116 3 318 595 46 316 1.56e-107 327
MsG0180006061.01.T01 MTR_3g032660 43.216 398 202 7 221 612 1 380 8.81e-100 311
MsG0180006061.01.T01 MTR_3g032700 42.965 398 203 7 221 612 1 380 6.18e-99 309
MsG0180006061.01.T01 MTR_7g090530 49.221 321 146 6 263 576 38 348 1.53e-94 298
MsG0180006061.01.T01 MTR_7g090550 46.988 332 159 6 259 582 35 357 5.58e-93 293
MsG0180006061.01.T01 MTR_3g032590 46.388 263 133 4 326 582 99 359 1.43e-74 245
MsG0180006061.01.T01 MTR_3g109050 84.559 136 20 1 37 171 80 215 1.98e-70 227
MsG0180006061.01.T01 MTR_7g018160 79.286 140 28 1 34 172 150 289 1.42e-65 217
MsG0180006061.01.T01 MTR_4g096800 74.468 141 17 2 36 175 150 272 8.81e-60 202
MsG0180006061.01.T01 MTR_4g009520 74.638 138 13 2 36 172 79 195 1.14e-58 195
MsG0180006061.01.T01 MTR_8g075630 86.607 112 14 1 36 146 95 206 9.76e-58 193
MsG0180006061.01.T01 MTR_4g113480 35.843 332 190 7 251 576 33 347 2.19e-57 202
MsG0180006061.01.T01 MTR_5g061500 76.812 138 15 2 36 172 367 488 3.53e-57 201
MsG0180006061.01.T01 MTR_0073s0030 85.714 112 15 1 36 146 95 206 1.27e-56 190
MsG0180006061.01.T01 MTR_0134s0020 72.263 137 18 2 36 171 227 344 2.12e-55 192
MsG0180006061.01.T01 MTR_1g107470 53.846 195 41 2 1 146 178 372 2.60e-55 192
MsG0180006061.01.T01 MTR_6g029550 71.942 139 20 2 35 172 270 390 2.96e-54 190
MsG0180006061.01.T01 MTR_5g032940 71.533 137 17 2 36 171 228 343 2.19e-53 186
MsG0180006061.01.T01 MTR_3g034020 73.684 133 20 2 36 167 308 426 1.78e-51 184
MsG0180006061.01.T01 MTR_1g106700 69.565 138 17 2 36 172 115 228 3.21e-51 177
MsG0180006061.01.T01 MTR_1g081340 69.343 137 23 3 37 172 285 403 5.31e-50 179
MsG0180006061.01.T01 MTR_5g009440 67.391 138 19 2 36 172 53 165 7.10e-50 171
MsG0180006061.01.T01 MTR_0550s0010 85.294 102 14 1 36 136 180 281 1.04e-49 174
MsG0180006061.01.T01 MTR_2g064230 71.014 138 18 2 36 172 306 422 7.75e-49 179
MsG0180006061.01.T01 MTR_1g047970 78.947 114 23 1 37 149 114 227 2.42e-48 182
MsG0180006061.01.T01 MTR_4g113345 33.526 346 184 12 255 595 22 326 1.10e-47 171
MsG0180006061.01.T01 MTR_2g058680 67.176 131 26 3 26 155 96 210 5.16e-45 159
MsG0180006061.01.T01 MTR_7g104240 74.783 115 11 2 36 149 209 306 7.16e-45 162
MsG0180006061.01.T01 MTR_5g071480 73.043 115 13 2 36 149 183 280 1.32e-43 157
MsG0180006061.01.T01 MTR_8g061330 73.913 115 12 2 36 149 339 436 4.71e-43 160
MsG0180006061.01.T01 MTR_1g116150 73.043 115 13 2 36 149 254 351 1.07e-42 157
MsG0180006061.01.T01 MTR_0022s0370 86.364 88 11 1 36 122 79 166 1.25e-42 151
MsG0180006061.01.T01 MTR_5g024850 72.174 115 14 2 36 149 273 370 1.76e-42 157
MsG0180006061.01.T01 MTR_4g132830 50.526 190 36 4 1 149 165 337 1.81e-42 156
MsG0180006061.01.T01 MTR_3g100990 58.696 138 56 1 36 172 362 499 5.22e-42 159
MsG0180006061.01.T01 MTR_0025s0050 80.645 93 18 0 55 147 107 199 6.72e-42 150
MsG0180006061.01.T01 MTR_8g039580 61.594 138 19 2 36 172 53 157 7.78e-42 149
MsG0180006061.01.T01 MTR_3g101850 61.314 137 13 2 36 172 122 218 8.19e-42 151
MsG0180006061.01.T01 MTR_8g039750 61.940 134 22 2 40 172 1 106 1.32e-41 147
MsG0180006061.01.T01 MTR_5g059380 70.940 117 16 2 36 151 285 384 1.36e-41 155
MsG0180006061.01.T01 MTR_1g012040 64.964 137 19 3 36 171 367 475 1.52e-41 160
MsG0180006061.01.T01 MTR_7g022020 62.319 138 17 3 36 172 496 599 8.01e-41 157
MsG0180006061.01.T01 MTR_7g060770 31.186 295 174 7 301 576 263 547 2.76e-40 155
MsG0180006061.01.T01 MTR_2g013330 71.296 108 30 1 36 142 345 452 2.39e-39 152
MsG0180006061.01.T01 MTR_3g031910 81.111 90 16 1 36 124 232 321 1.59e-38 145
MsG0180006061.01.T01 MTR_4g076560 32.639 288 172 7 300 573 201 480 5.92e-38 147
MsG0180006061.01.T01 MTR_4g113210 34.686 271 135 10 252 509 16 257 1.29e-37 140
MsG0180006061.01.T01 MTR_7g090540 41.294 201 95 5 387 582 5 187 3.11e-37 140
MsG0180006061.01.T01 MTR_4g119830 33.977 259 156 5 337 585 245 498 7.42e-37 144
MsG0180006061.01.T01 MTR_1g093700 55.072 138 44 2 36 172 191 311 1.51e-36 139
MsG0180006061.01.T01 MTR_5g087830 52.174 138 50 2 36 172 128 250 1.44e-34 132
MsG0180006061.01.T01 MTR_0017s0290 43.216 199 79 5 1 172 218 409 1.05e-33 134
MsG0180006061.01.T01 MTR_7g052070 62.963 108 32 2 36 142 127 227 1.02e-31 123
MsG0180006061.01.T01 MTR_6g012610 58.824 102 41 1 40 140 1 102 1.22e-31 118
MsG0180006061.01.T01 MTR_7g113060 53.636 110 50 1 36 144 81 190 1.97e-31 121
MsG0180006061.01.T01 MTR_4g010800 53.043 115 53 1 36 149 50 164 3.82e-31 119
MsG0180006061.01.T01 MTR_4g062370 49.275 138 53 2 36 172 601 722 7.05e-31 129
MsG0180006061.01.T01 MTR_4g063905 28.929 280 157 5 337 579 425 699 1.21e-30 128
MsG0180006061.01.T01 MTR_4g098650 27.907 301 158 5 333 579 476 771 1.89e-30 127
MsG0180006061.01.T01 MTR_3g032450 68.182 88 14 1 85 172 1 74 2.12e-30 114
MsG0180006061.01.T01 MTR_4g134740 51.351 111 54 0 61 171 1 111 4.31e-30 115
MsG0180006061.01.T01 MTR_6g044370 57.143 126 12 3 47 171 213 297 4.34e-30 120
MsG0180006061.01.T01 MTR_7g046285 58.000 100 42 0 72 171 39 138 8.96e-30 115
MsG0180006061.01.T01 MTR_0118s0040 87.879 66 7 1 36 100 222 287 1.81e-29 118
MsG0180006061.01.T01 MTR_2g058780 86.364 66 8 1 36 100 248 313 4.00e-29 118
MsG0180006061.01.T01 MTR_5g071420 66.667 96 29 3 36 130 121 214 7.17e-29 115
MsG0180006061.01.T01 MTR_4g076760 51.818 110 52 1 36 144 417 526 8.28e-29 121
MsG0180006061.01.T01 MTR_5g064790 46.667 135 53 3 40 172 1 118 1.24e-28 111
MsG0180006061.01.T01 MTR_8g057880 47.826 138 56 2 36 172 78 200 1.33e-28 115
MsG0180006061.01.T01 MTR_0296s0010 53.846 104 47 1 36 138 229 332 1.45e-28 117
MsG0180006061.01.T01 MTR_8g023250 49.275 138 39 3 36 172 200 307 1.86e-28 116
MsG0180006061.01.T01 MTR_1g085530 38.764 178 100 3 406 579 715 887 5.27e-28 120
MsG0180006061.01.T01 MTR_4g115110 50.962 104 50 1 36 138 55 158 1.36e-27 109
MsG0180006061.01.T01 MTR_0032s0020 55.882 102 44 1 36 136 485 586 2.36e-27 117
MsG0180006061.01.T01 MTR_2g064240 48.905 137 41 2 36 171 146 254 6.79e-27 110
MsG0180006061.01.T01 MTR_4g037490 45.946 111 59 1 40 149 1 111 1.65e-26 104
MsG0180006061.01.T01 MTR_2g058900 55.789 95 42 0 55 149 35 129 7.37e-26 103
MsG0180006061.01.T01 MTR_4g039550 42.446 139 54 2 34 171 64 177 7.57e-26 105
MsG0180006061.01.T01 MTR_0014s0220 47.321 112 58 1 38 148 507 618 1.06e-25 113
MsG0180006061.01.T01 MTR_1g092930 43.704 135 75 1 36 169 240 374 1.06e-25 109
MsG0180006061.01.T01 MTR_5g464580 87.500 56 7 0 117 172 35 90 1.78e-25 100
MsG0180006061.01.T01 MTR_6g452450 83.077 65 10 1 36 99 113 177 1.97e-25 106
MsG0180006061.01.T01 MTR_1g093010 42.222 135 77 1 36 169 218 352 5.54e-25 107
MsG0180006061.01.T01 MTR_1g092990 42.222 135 77 1 36 169 241 375 5.85e-25 107
MsG0180006061.01.T01 MTR_8g085330 37.975 158 74 3 16 172 132 266 6.57e-25 105
MsG0180006061.01.T01 MTR_2g016390 45.652 138 55 2 36 172 391 509 8.95e-25 109
MsG0180006061.01.T01 MTR_5g071550 30.667 225 114 6 300 523 153 336 1.33e-24 106
MsG0180006061.01.T01 MTR_3g046370 65.060 83 26 2 40 119 1 83 3.08e-24 98.2
MsG0180006061.01.T01 MTR_6g069780 48.544 103 36 1 70 172 3 88 3.92e-24 97.4
MsG0180006061.01.T01 MTR_1g115570 30.579 242 118 8 301 538 126 321 8.98e-24 103
MsG0180006061.01.T01 MTR_1g033190 50.000 98 47 2 23 118 23 120 1.50e-23 96.7
MsG0180006061.01.T01 MTR_3g464700 29.464 224 116 6 300 522 117 299 1.63e-23 102
MsG0180006061.01.T01 MTR_5g071700 40.580 138 59 2 36 172 303 418 2.54e-23 103
MsG0180006061.01.T01 MTR_3g464650 26.619 278 146 7 300 575 93 314 6.78e-23 100
MsG0180006061.01.T01 MTR_4g078000 46.847 111 57 2 36 145 52 161 1.59e-22 97.4
MsG0180006061.01.T01 MTR_2g078760 27.640 322 154 11 262 575 3 253 1.75e-22 97.4
MsG0180006061.01.T01 MTR_2g066670 80.000 65 12 1 36 99 312 376 1.80e-22 101
MsG0180006061.01.T01 MTR_5g099270 85.714 49 7 0 80 128 2 50 2.23e-22 92.0
MsG0180006061.01.T01 MTR_1g018670 58.696 92 32 3 81 171 6 92 2.53e-22 95.1
MsG0180006061.01.T01 MTR_2g078760 27.640 322 154 11 262 575 82 332 2.68e-22 99.0
MsG0180006061.01.T01 MTR_8g057780 39.552 134 58 2 39 171 3 114 2.80e-22 92.8
MsG0180006061.01.T01 MTR_0196s0030 65.333 75 15 1 122 196 86 149 5.33e-22 97.4
MsG0180006061.01.T01 MTR_7g110460 41.304 138 52 2 36 172 55 164 1.23e-21 94.0
MsG0180006061.01.T01 MTR_0003s0410 45.794 107 56 2 34 138 419 525 1.43e-21 100
MsG0180006061.01.T01 MTR_3g048960 42.742 124 56 1 49 172 3 111 4.78e-21 93.6
MsG0180006061.01.T01 MTR_3g085980 34.356 163 82 5 17 172 44 188 6.68e-21 91.3
MsG0180006061.01.T01 MTR_2g084465 82.456 57 9 1 36 91 246 302 2.24e-20 92.4
MsG0180006061.01.T01 MTR_1g101230 49.020 102 37 1 70 171 84 170 2.95e-20 89.0
MsG0180006061.01.T01 MTR_0003s0250 42.424 99 56 1 36 133 105 203 5.35e-20 89.4
MsG0180006061.01.T01 MTR_4g094208 29.126 309 150 13 268 573 32 274 5.77e-20 90.9
MsG0180006061.01.T01 MTR_3g103370 86.275 51 6 1 36 85 55 105 6.67e-20 86.3
MsG0180006061.01.T01 MTR_6g018340 64.516 62 22 0 111 172 1 62 9.33e-20 84.0
MsG0180006061.01.T01 MTR_5g032840 40.146 137 53 2 36 171 302 410 1.01e-19 92.4
MsG0180006061.01.T01 MTR_7g108380 47.778 90 31 1 82 171 1 74 1.25e-19 84.0
MsG0180006061.01.T01 MTR_8g072100 40.146 137 49 2 36 171 78 182 1.45e-19 87.4
MsG0180006061.01.T01 MTR_5g020340 54.118 85 37 2 36 118 279 363 1.50e-19 91.3
MsG0180006061.01.T01 MTR_3g052540 42.029 138 26 3 36 172 198 282 1.69e-19 89.7
MsG0180006061.01.T01 MTR_3g462200 51.899 79 37 1 40 117 1 79 2.07e-19 83.2
MsG0180006061.01.T01 MTR_5g071550 28.638 213 110 6 300 511 153 324 2.16e-19 90.5
MsG0180006061.01.T01 MTR_7g025640 31.507 219 111 7 364 578 6 189 2.19e-19 87.0
MsG0180006061.01.T01 MTR_3g074610 28.013 307 156 10 268 573 37 279 3.01e-19 89.0
MsG0180006061.01.T01 MTR_4g094542 28.689 244 123 10 301 538 150 348 3.20e-19 90.1
MsG0180006061.01.T01 MTR_8g015280 52.439 82 38 1 36 116 62 143 3.40e-19 84.7
MsG0180006061.01.T01 MTR_2g008850 28.881 277 126 12 303 573 21 232 4.26e-19 87.4
MsG0180006061.01.T01 MTR_4g125810 27.667 300 169 10 235 523 185 447 4.30e-19 91.3
MsG0180006061.01.T01 MTR_6g013370 85.417 48 6 1 118 164 9 56 4.34e-19 81.6
MsG0180006061.01.T01 MTR_8g463130 26.498 317 160 10 262 573 31 279 5.00e-19 88.2
MsG0180006061.01.T01 MTR_3g072880 38.710 124 54 3 40 161 1 104 5.58e-19 84.3
MsG0180006061.01.T01 MTR_1g014640 28.099 242 128 8 303 540 110 309 6.04e-19 89.0
MsG0180006061.01.T01 MTR_1g013400 28.099 242 128 8 303 540 110 309 6.04e-19 89.0
MsG0180006061.01.T01 MTR_8g463130 26.498 317 160 10 262 573 3 251 6.44e-19 87.0
MsG0180006061.01.T01 MTR_3g091060 24.691 243 140 6 279 521 107 306 6.55e-19 89.4
MsG0180006061.01.T01 MTR_1g098810 38.095 126 60 2 34 158 23 131 8.41e-19 83.6
MsG0180006061.01.T01 MTR_1g057360 50.000 84 41 1 36 118 272 355 1.14e-18 88.6
MsG0180006061.01.T01 MTR_2g008850 28.674 279 128 12 301 573 65 278 1.36e-18 87.0
MsG0180006061.01.T01 MTR_3g085530 40.580 138 53 2 36 172 667 776 1.76e-18 90.1
MsG0180006061.01.T01 MTR_3g105730 25.763 295 152 10 303 592 67 299 2.03e-18 86.7
MsG0180006061.01.T01 MTR_3g081620 53.425 73 34 0 61 133 1 73 2.27e-18 80.9
MsG0180006061.01.T01 MTR_7g093240 33.333 153 60 5 380 527 4 119 2.35e-18 82.0
MsG0180006061.01.T01 MTR_3g105730 25.763 295 152 10 303 592 45 277 2.52e-18 85.9
MsG0180006061.01.T01 MTR_7g117425 65.625 64 22 0 59 122 130 193 3.12e-18 85.1
MsG0180006061.01.T01 MTR_3g074460 49.398 83 41 1 36 117 77 159 6.71e-18 81.6
MsG0180006061.01.T01 MTR_5g063940 28.339 307 155 11 268 573 37 279 1.03e-17 84.3
MsG0180006061.01.T01 MTR_3g107880 27.817 284 144 12 295 573 58 285 1.18e-17 84.7
MsG0180006061.01.T01 MTR_5g063940 29.412 272 131 10 303 573 21 232 1.20e-17 83.2
MsG0180006061.01.T01 MTR_7g070715 39.130 138 55 2 36 172 262 371 1.33e-17 85.5
MsG0180006061.01.T01 MTR_3g104710 27.152 302 145 12 301 575 286 539 2.16e-17 86.3
MsG0180006061.01.T01 MTR_1g106780 57.534 73 22 1 100 172 58 121 2.53e-17 79.0
MsG0180006061.01.T01 MTR_3g107880 27.915 283 143 12 296 573 116 342 2.73e-17 84.7
MsG0180006061.01.T01 MTR_3g107880 27.915 283 143 12 296 573 117 343 3.10e-17 84.3
MsG0180006061.01.T01 MTR_2g033000 26.621 293 138 11 300 575 99 331 5.34e-17 83.6
MsG0180006061.01.T01 MTR_8g036260 88.095 42 5 0 131 172 315 356 5.62e-17 83.6
MsG0180006061.01.T01 MTR_5g024340 27.600 250 138 9 297 540 119 331 1.17e-16 82.8
MsG0180006061.01.T01 MTR_1g028300 28.571 287 167 8 246 532 92 340 2.02e-16 82.0
MsG0180006061.01.T01 MTR_2g078760 26.154 260 129 9 262 511 82 288 2.26e-16 80.5
MsG0180006061.01.T01 MTR_7g112490 31.628 215 99 9 381 585 195 371 2.72e-16 81.6
MsG0180006061.01.T01 MTR_7g490340 41.584 101 57 2 34 132 27 127 2.90e-16 75.9
MsG0180006061.01.T01 MTR_6g027930 57.377 61 26 0 111 171 1 61 3.26e-16 74.7
MsG0180006061.01.T01 MTR_5g020370 44.118 102 56 1 36 136 251 352 3.72e-16 80.9
MsG0180006061.01.T01 MTR_7g112490 31.628 215 99 9 381 585 213 389 5.41e-16 80.9
MsG0180006061.01.T01 MTR_3g056470 54.795 73 24 1 100 172 58 121 6.80e-16 74.7
MsG0180006061.01.T01 MTR_6g086070 35.172 145 59 4 34 172 27 142 1.18e-15 74.7
MsG0180006061.01.T01 MTR_2g040500 27.200 250 121 8 301 523 267 482 1.19e-15 80.5
MsG0180006061.01.T01 MTR_4g101340 39.130 115 41 2 40 153 1 87 1.34e-15 72.8
MsG0180006061.01.T01 MTR_3g068200 26.351 296 154 11 301 575 123 375 1.69e-15 79.3
MsG0180006061.01.T01 MTR_5g080680 26.695 236 122 5 301 523 132 329 2.23e-15 79.0
MsG0180006061.01.T01 MTR_4g129060 54.545 66 29 1 79 144 120 184 6.89e-15 75.5
MsG0180006061.01.T01 MTR_8g016050 59.016 61 22 1 111 171 1 58 7.06e-15 70.5
MsG0180006061.01.T01 MTR_0007s0160 54.237 59 27 0 111 169 1 59 7.06e-15 70.9
MsG0180006061.01.T01 MTR_5g077490 53.165 79 27 2 94 172 74 142 8.33e-15 72.4
MsG0180006061.01.T01 MTR_2g065670 44.000 100 42 1 79 178 255 340 1.02e-14 78.2
MsG0180006061.01.T01 MTR_1g086350 26.400 250 144 9 300 540 101 319 1.08e-14 76.6
MsG0180006061.01.T01 MTR_3g452260 63.462 52 19 0 120 171 41 92 1.18e-14 70.5
MsG0180006061.01.T01 MTR_3g451160 63.462 52 19 0 120 171 41 92 1.18e-14 70.5
MsG0180006061.01.T01 MTR_1g014190 25.461 271 122 11 300 523 51 288 1.24e-14 76.3
MsG0180006061.01.T01 MTR_1g086350 26.400 250 144 9 300 540 117 335 1.26e-14 76.6
MsG0180006061.01.T01 MTR_1g067230 72.917 48 6 1 137 177 2 49 1.28e-14 68.9
MsG0180006061.01.T01 MTR_7g498270 47.561 82 32 3 67 148 38 108 1.62e-14 70.5
MsG0180006061.01.T01 MTR_2g008505 35.507 138 40 2 36 172 256 345 2.35e-14 75.5
MsG0180006061.01.T01 MTR_1g014190 25.461 271 122 11 300 523 89 326 2.91e-14 75.5
MsG0180006061.01.T01 MTR_4g116420 25.874 286 148 12 300 577 123 352 3.79e-14 75.1
MsG0180006061.01.T01 MTR_3g023450 39.091 110 57 3 70 172 6 112 4.18e-14 69.7
MsG0180006061.01.T01 MTR_4g086180 40.000 105 45 2 34 137 345 432 4.47e-14 75.1
MsG0180006061.01.T01 MTR_4g123080 26.190 252 144 9 299 540 93 312 5.30e-14 74.3
MsG0180006061.01.T01 MTR_4g123080 26.587 252 143 8 299 540 111 330 7.23e-14 73.9
MsG0180006061.01.T01 MTR_1g098830 56.923 65 27 1 110 173 15 79 1.16e-13 67.0
MsG0180006061.01.T01 MTR_1g086350 24.735 283 152 10 304 577 19 249 1.18e-13 72.4
MsG0180006061.01.T01 MTR_7g060880 46.316 95 27 2 102 172 17 111 1.77e-13 68.9
MsG0180006061.01.T01 MTR_1g050520 25.606 289 155 11 292 575 411 644 2.10e-13 73.9
MsG0180006061.01.T01 MTR_3g105880 25.279 269 123 10 300 522 51 287 3.74e-13 71.6
MsG0180006061.01.T01 MTR_4g007440 25.275 273 131 8 292 522 46 287 4.15e-13 71.6
MsG0180006061.01.T01 MTR_1g015110 25.763 295 158 10 301 575 290 543 5.11e-13 72.4
MsG0180006061.01.T01 MTR_3g105880 25.556 270 123 11 300 523 51 288 5.31e-13 70.9
MsG0180006061.01.T01 MTR_6g081850 25.651 269 141 10 303 552 81 309 5.67e-13 70.9
MsG0180006061.01.T01 MTR_3g032470 76.000 50 10 2 36 84 165 213 8.19e-13 68.6
MsG0180006061.01.T01 MTR_7g117680 48.485 66 33 1 36 100 54 119 1.09e-12 65.5
MsG0180006061.01.T01 MTR_8g017240 25.185 270 168 10 301 556 86 335 1.14e-12 70.5
MsG0180006061.01.T01 MTR_6g071545 38.462 104 57 3 28 124 190 293 1.46e-12 69.3
MsG0180006061.01.T01 MTR_5g009370 26.280 293 172 10 294 579 79 334 1.79e-12 69.3
MsG0180006061.01.T01 MTR_1g102100 34.167 120 54 3 38 157 10 104 2.28e-12 64.3
MsG0180006061.01.T01 MTR_6g086110 44.048 84 30 2 77 159 34 101 2.48e-12 63.9
MsG0180006061.01.T01 MTR_8g073690 63.043 46 15 1 126 171 20 63 3.72e-12 62.4
MsG0180006061.01.T01 MTR_7g006890 48.485 66 33 1 36 100 160 225 6.66e-12 65.9
MsG0180006061.01.T01 MTR_1g083690 25.987 304 158 14 301 577 89 352 7.02e-12 67.8
MsG0180006061.01.T01 MTR_7g021530 29.648 199 106 8 382 578 245 411 7.03e-12 68.6
MsG0180006061.01.T01 MTR_1g086460 34.109 129 51 3 44 171 51 146 7.34e-12 64.3
MsG0180006061.01.T01 MTR_7g021530 28.440 218 111 9 374 578 185 370 7.60e-12 68.2
MsG0180006061.01.T01 MTR_3g010480 58.000 50 21 0 122 171 5 54 7.64e-12 61.2
MsG0180006061.01.T01 MTR_3g491830 25.101 247 149 6 300 527 88 317 1.14e-11 67.4
MsG0180006061.01.T01 MTR_1g012410 83.784 37 5 1 36 71 29 65 1.15e-11 60.8
MsG0180006061.01.T01 MTR_7g021530 27.523 218 113 8 374 578 135 320 1.23e-11 67.0
MsG0180006061.01.T01 MTR_2g435550 26.797 306 153 15 301 577 92 355 2.58e-11 66.2
MsG0180006061.01.T01 MTR_5g098440 44.737 76 39 2 70 142 4 79 2.63e-11 60.1
MsG0180006061.01.T01 MTR_2g435550 26.797 306 153 15 301 577 78 341 2.73e-11 65.9
MsG0180006061.01.T01 MTR_3g112030 37.273 110 40 2 63 172 3 83 2.97e-11 60.5
MsG0180006061.01.T01 MTR_3g098220 39.560 91 53 2 34 122 45 135 3.44e-11 61.6
MsG0180006061.01.T01 MTR_3g114250 53.704 54 25 0 104 157 14 67 3.59e-11 63.5
MsG0180006061.01.T01 MTR_6g008980 36.792 106 43 2 51 155 1 83 3.68e-11 61.6
MsG0180006061.01.T01 MTR_1g045920 40.244 82 47 1 93 172 185 266 5.97e-11 63.9
MsG0180006061.01.T01 MTR_3g110165 57.447 47 20 0 98 144 17 63 6.48e-11 58.9
MsG0180006061.01.T01 MTR_7g050355 48.485 66 33 1 36 100 553 618 7.32e-11 65.5
MsG0180006061.01.T01 MTR_1g075350 82.759 29 5 0 173 201 31 59 8.25e-11 58.2
MsG0180006061.01.T01 MTR_3g065720 44.928 69 24 1 90 158 10 64 9.61e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006061.01.T01 AT4G38520 73.724 392 103 0 221 612 1 392 0.0 624
MsG0180006061.01.T01 AT4G38520 73.724 392 103 0 221 612 1 392 0.0 624
MsG0180006061.01.T01 AT5G66080 74.346 382 97 1 221 601 1 382 0.0 612
MsG0180006061.01.T01 AT3G51370 73.491 381 96 2 221 601 1 376 0.0 600
MsG0180006061.01.T01 AT3G51370 73.491 381 96 2 221 601 1 376 0.0 600
MsG0180006061.01.T01 AT3G12620 67.560 373 120 1 225 597 7 378 0.0 538
MsG0180006061.01.T01 AT3G12620 67.560 373 120 1 225 597 7 378 0.0 538
MsG0180006061.01.T01 AT3G55050 64.721 377 124 3 232 605 13 383 0.0 518
MsG0180006061.01.T01 AT3G55050 64.721 377 124 3 232 605 13 383 0.0 518
MsG0180006061.01.T01 AT5G66080 74.818 274 69 0 328 601 5 278 8.26e-160 459
MsG0180006061.01.T01 AT3G51370 70.748 294 82 2 308 601 2 291 8.45e-155 447
MsG0180006061.01.T01 AT5G02760 60.976 369 138 4 228 596 1 363 2.74e-153 446
MsG0180006061.01.T01 AT3G17090 55.851 376 141 5 221 582 1 365 1.12e-146 430
MsG0180006061.01.T01 AT4G33920 52.344 384 155 5 221 601 1 359 1.58e-138 409
MsG0180006061.01.T01 AT5G06750 55.780 346 139 4 254 595 43 378 1.80e-136 404
MsG0180006061.01.T01 AT5G06750 55.780 346 139 4 254 595 43 378 1.80e-136 404
MsG0180006061.01.T01 AT3G17090 52.761 326 129 5 221 532 1 315 1.86e-115 347
MsG0180006061.01.T01 AT4G33920 55.000 280 118 3 325 601 2 276 9.72e-108 327
MsG0180006061.01.T01 AT5G06750 52.805 303 131 5 297 595 2 296 3.51e-105 320
MsG0180006061.01.T01 AT4G33920 55.777 251 103 3 354 601 1 246 1.37e-97 299
MsG0180006061.01.T01 AT3G16560 30.341 323 181 8 301 585 175 491 2.49e-38 148
MsG0180006061.01.T01 AT3G16560 30.341 323 181 8 301 585 175 491 2.49e-38 148
MsG0180006061.01.T01 AT3G16560 30.341 323 181 8 301 585 175 491 2.49e-38 148
MsG0180006061.01.T01 AT3G09400 30.435 368 192 12 253 579 301 645 2.70e-36 144
MsG0180006061.01.T01 AT5G02400 32.609 276 144 6 338 576 396 666 2.72e-36 145
MsG0180006061.01.T01 AT1G07630 28.205 351 198 6 278 579 312 657 2.54e-34 139
MsG0180006061.01.T01 AT2G28890 29.930 284 154 6 336 579 371 649 2.27e-33 136
MsG0180006061.01.T01 AT2G35350 29.110 292 156 5 339 584 493 779 8.69e-33 135
MsG0180006061.01.T01 AT3G16560 30.208 288 157 8 301 550 175 456 9.18e-31 126
MsG0180006061.01.T01 AT5G28780 48.592 142 66 4 34 172 187 324 1.82e-29 120
MsG0180006061.01.T01 AT1G07160 29.537 281 143 7 297 575 149 376 3.08e-28 117
MsG0180006061.01.T01 AT3G51690 40.288 139 81 2 36 172 187 325 1.52e-27 114
MsG0180006061.01.T01 AT3G09400 29.641 334 171 12 253 545 301 611 2.26e-27 117
MsG0180006061.01.T01 AT2G40180 28.428 299 151 11 288 579 147 389 7.06e-27 113
MsG0180006061.01.T01 AT3G51700 42.446 139 78 2 36 172 191 329 7.45e-27 112
MsG0180006061.01.T01 AT2G46920 35.106 188 112 4 406 589 667 848 1.08e-26 116
MsG0180006061.01.T01 AT2G46920 35.106 188 112 4 406 589 667 848 1.08e-26 116
MsG0180006061.01.T01 AT2G46920 35.106 188 112 4 406 589 667 848 1.08e-26 116
MsG0180006061.01.T01 AT2G46920 35.106 188 112 4 406 589 667 848 1.08e-26 116
MsG0180006061.01.T01 AT2G30020 28.727 275 140 8 303 575 172 392 4.26e-24 105
MsG0180006061.01.T01 AT1G67820 29.333 225 116 5 300 522 114 297 1.10e-22 101
MsG0180006061.01.T01 AT1G67820 29.333 225 116 5 300 522 150 333 1.35e-22 101
MsG0180006061.01.T01 AT4G28400 28.881 277 143 12 274 544 22 250 1.08e-20 92.8
MsG0180006061.01.T01 AT4G28400 28.881 277 143 12 274 544 44 272 1.46e-20 92.8
MsG0180006061.01.T01 AT4G31750 28.049 246 130 8 303 543 66 269 1.85e-20 93.2
MsG0180006061.01.T01 AT4G31750 28.049 246 130 8 303 543 66 269 1.85e-20 93.2
MsG0180006061.01.T01 AT2G20630 30.165 242 119 10 304 539 66 263 1.87e-20 92.4
MsG0180006061.01.T01 AT1G43900 29.433 282 133 10 295 573 148 366 2.09e-20 94.0
MsG0180006061.01.T01 AT4G31750 27.642 246 131 8 303 543 66 269 2.25e-20 92.8
MsG0180006061.01.T01 AT2G20630 30.041 243 120 10 303 539 65 263 3.59e-20 91.7
MsG0180006061.01.T01 AT1G34750 26.923 338 173 12 239 575 17 281 5.52e-20 90.9
MsG0180006061.01.T01 AT1G34750 26.923 338 173 12 239 575 17 281 5.52e-20 90.9
MsG0180006061.01.T01 AT1G34750 26.923 338 173 12 239 575 17 281 5.52e-20 90.9
MsG0180006061.01.T01 AT4G26080 26.797 306 174 10 284 575 153 422 8.46e-20 92.8
MsG0180006061.01.T01 AT5G53140 24.126 286 169 9 256 539 93 332 3.20e-19 90.9
MsG0180006061.01.T01 AT5G53140 24.126 286 169 9 256 539 93 332 3.20e-19 90.9
MsG0180006061.01.T01 AT5G10740 27.572 243 128 8 303 540 66 265 3.59e-19 90.1
MsG0180006061.01.T01 AT5G10740 27.572 243 128 8 303 540 66 265 3.59e-19 90.1
MsG0180006061.01.T01 AT1G22280 28.846 312 153 11 268 573 36 284 6.24e-19 88.2
MsG0180006061.01.T01 AT1G78200 27.915 283 153 10 268 544 35 272 8.93e-19 87.4
MsG0180006061.01.T01 AT1G78200 27.915 283 153 10 268 544 35 272 8.93e-19 87.4
MsG0180006061.01.T01 AT1G78200 27.915 283 153 10 268 544 35 272 8.93e-19 87.4
MsG0180006061.01.T01 AT5G24940 27.347 245 130 9 301 540 64 265 1.65e-18 89.0
MsG0180006061.01.T01 AT1G22280 28.710 310 150 11 268 573 36 278 2.32e-18 86.3
MsG0180006061.01.T01 AT2G25620 25.914 301 156 11 285 575 113 356 2.40e-18 87.8
MsG0180006061.01.T01 AT2G25620 25.914 301 156 11 285 575 113 356 2.40e-18 87.8
MsG0180006061.01.T01 AT1G78200 27.338 278 139 11 279 544 1 227 9.99e-18 83.6
MsG0180006061.01.T01 AT1G78200 27.338 278 139 11 279 544 1 227 9.99e-18 83.6
MsG0180006061.01.T01 AT2G33700 27.915 283 135 11 299 573 121 342 1.11e-17 85.9
MsG0180006061.01.T01 AT1G07430 28.270 237 118 6 301 523 157 355 2.71e-17 85.1
MsG0180006061.01.T01 AT3G15260 26.844 339 171 13 239 573 21 286 7.43e-17 82.0
MsG0180006061.01.T01 AT3G15260 26.844 339 171 13 239 573 21 286 7.43e-17 82.0
MsG0180006061.01.T01 AT5G57050 25.965 285 168 7 301 575 160 411 2.69e-16 82.0
MsG0180006061.01.T01 AT5G57050 25.965 285 168 7 301 575 120 371 2.97e-16 81.6
MsG0180006061.01.T01 AT3G51470 26.000 250 137 7 299 540 60 269 4.19e-16 80.1
MsG0180006061.01.T01 AT3G51470 26.000 250 137 7 299 540 104 313 5.22e-16 80.5
MsG0180006061.01.T01 AT4G08260 26.007 273 117 8 303 575 21 208 8.52e-16 77.0
MsG0180006061.01.T01 AT3G16800 27.243 301 150 13 300 575 92 348 9.08e-16 79.7
MsG0180006061.01.T01 AT3G16800 27.243 301 150 13 300 575 92 348 9.08e-16 79.7
MsG0180006061.01.T01 AT3G16800 27.243 301 150 13 300 575 92 348 9.08e-16 79.7
MsG0180006061.01.T01 AT1G17550 26.646 319 156 13 292 575 226 501 1.09e-15 80.5
MsG0180006061.01.T01 AT1G17550 26.646 319 156 13 292 575 226 501 1.09e-15 80.5
MsG0180006061.01.T01 AT1G18030 27.626 257 133 9 303 540 111 333 1.34e-15 79.0
MsG0180006061.01.T01 AT1G72770 26.710 307 154 10 299 575 236 501 1.74e-15 80.1
MsG0180006061.01.T01 AT1G72770 26.710 307 154 10 299 575 236 501 1.74e-15 80.1
MsG0180006061.01.T01 AT1G72770 26.710 307 154 10 299 575 236 501 1.74e-15 80.1
MsG0180006061.01.T01 AT4G28400 28.099 242 123 10 274 511 44 238 4.17e-15 75.9
MsG0180006061.01.T01 AT3G62260 27.692 260 145 10 291 539 17 244 5.05e-15 76.6
MsG0180006061.01.T01 AT3G05640 27.797 295 155 13 301 575 93 349 8.16e-15 77.0
MsG0180006061.01.T01 AT3G05640 27.797 295 155 13 301 575 93 349 8.16e-15 77.0
MsG0180006061.01.T01 AT3G05640 27.797 295 155 13 301 575 93 349 8.16e-15 77.0
MsG0180006061.01.T01 AT5G26010 27.027 296 161 11 298 575 66 324 1.35e-14 75.9
MsG0180006061.01.T01 AT3G62260 27.413 259 147 9 291 539 106 333 1.56e-14 76.3
MsG0180006061.01.T01 AT3G62260 27.413 259 147 9 291 539 107 334 1.64e-14 76.3
MsG0180006061.01.T01 AT4G31860 25.830 271 121 11 300 523 51 288 1.71e-14 75.1
MsG0180006061.01.T01 AT5G59220 28.390 236 116 8 301 523 148 343 2.21e-14 75.9
MsG0180006061.01.T01 AT4G31860 25.830 271 121 11 300 523 51 288 2.43e-14 75.5
MsG0180006061.01.T01 AT3G16800 29.515 227 110 9 361 575 65 253 2.86e-14 73.6
MsG0180006061.01.T01 AT3G16800 29.515 227 110 9 361 575 65 253 2.86e-14 73.6
MsG0180006061.01.T01 AT5G27930 29.064 203 97 8 381 574 189 353 1.28e-13 73.2
MsG0180006061.01.T01 AT5G27930 29.064 203 97 8 381 574 189 353 1.28e-13 73.2
MsG0180006061.01.T01 AT1G34750 24.818 274 152 9 239 511 17 237 4.90e-13 69.7
MsG0180006061.01.T01 AT1G48040 27.152 302 147 14 269 544 81 335 1.06e-12 70.5
MsG0180006061.01.T01 AT2G34740 24.908 273 142 10 303 573 121 332 1.10e-12 70.1
MsG0180006061.01.T01 AT1G79630 28.926 242 95 10 374 585 106 300 7.56e-12 68.2
MsG0180006061.01.T01 AT1G79630 28.926 242 95 10 374 585 106 300 7.56e-12 68.2
MsG0180006061.01.T01 AT1G79630 28.926 242 95 10 374 585 106 300 7.56e-12 68.2
MsG0180006061.01.T01 AT1G79630 28.926 242 95 10 374 585 106 300 7.56e-12 68.2
MsG0180006061.01.T01 AT1G79630 28.750 240 98 10 374 585 216 410 8.85e-12 68.2
MsG0180006061.01.T01 AT1G79630 28.750 240 98 10 374 585 212 406 9.66e-12 68.2
MsG0180006061.01.T01 AT1G79630 28.926 242 95 10 374 585 146 340 1.11e-11 67.8
MsG0180006061.01.T01 AT1G79630 28.926 242 95 10 374 585 146 340 1.11e-11 67.8
MsG0180006061.01.T01 AT1G18030 26.457 223 116 8 303 511 111 299 3.88e-11 65.1
MsG0180006061.01.T01 AT4G32950 26.255 259 151 10 299 545 70 300 8.38e-11 64.3

Find 160 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTTAATTTAATTTAAT+TGG 0.103600 1:+99570700 MsG0180006061.01.T01:three_prime_UTR
TGGTGATTCCAGGGCTGTTT+TGG 0.205002 1:+99569260 MsG0180006061.01.T01:CDS
AAATGGTTACTTTCAATTAA+AGG 0.220890 1:+99564663 MsG0180006061.01.T01:CDS
CACCAAGATTTGCTATATAA+AGG 0.237162 1:-99569242 None:intergenic
CTGATCTTCCAGCAAGTTAT+TGG 0.273921 1:-99568216 None:intergenic
CACGAAGAAATTGTAAAGTT+TGG 0.278220 1:+99564639 MsG0180006061.01.T01:CDS
TTCCCTGGTATTTCTGTTAG+AGG 0.293299 1:+99570601 MsG0180006061.01.T01:CDS
TTGAATGAGTCTGGCCCTTA+TGG 0.294051 1:+99568266 MsG0180006061.01.T01:CDS
TTGCGGGTACCCATCGGGAC+TGG 0.308392 1:-99565909 None:intergenic
GGCCTGCTTTCGGCCGGGTT+CGG 0.311713 1:+99568082 MsG0180006061.01.T01:CDS
AAATTGTAAAGTTTGGAAAA+TGG 0.319582 1:+99564646 MsG0180006061.01.T01:CDS
TACTCTTAAGATGTTGAAAT+AGG 0.323585 1:-99568352 None:intergenic
GGCCCTTATGGAACCTTTGT+TGG 0.326218 1:+99568278 MsG0180006061.01.T01:CDS
GCTGCAATTTGCGGTGAAAT+TGG 0.328123 1:-99569177 None:intergenic
ATGTTTCTCATCAGCATAAC+TGG 0.329177 1:-99565367 None:intergenic
ACTTACTGTGAATATGAGTT+TGG 0.332330 1:+99564593 None:intergenic
TTATCTGTTGTAGTAGTAAA+AGG 0.336468 1:-99570658 None:intergenic
CAGGGCTACCCTTCAAATTC+AGG 0.340699 1:+99565530 MsG0180006061.01.T01:CDS
TAGCAAATCTTGGTGATTCC+AGG 0.350723 1:+99569250 MsG0180006061.01.T01:CDS
TAATTTAATTTAATTTAATT+GGG 0.357456 1:+99570701 MsG0180006061.01.T01:three_prime_UTR
ACCAAGATTTGCTATATAAA+GGG 0.370067 1:-99569241 None:intergenic
ACAACAATATTTGAATCATC+AGG 0.370480 1:-99569384 None:intergenic
TTAATGTCCACTTCATAAAC+AGG 0.370496 1:+99570837 MsG0180006061.01.T01:three_prime_UTR
CTTGTTGGTGTTATTTGTAA+TGG 0.371085 1:+99569216 MsG0180006061.01.T01:CDS
CATGGGTCTGGGCACGAGTC+CGG 0.372958 1:+99565968 MsG0180006061.01.T01:CDS
AAACCCCGCTTTCATGGGTC+TGG 0.373881 1:+99565956 MsG0180006061.01.T01:CDS
ATAAAATTGACCGTGGAGTT+CGG 0.374935 1:+99570500 MsG0180006061.01.T01:CDS
AGGATAAAACCCCGCTTTCA+TGG 0.376118 1:+99565950 MsG0180006061.01.T01:CDS
GTTGGGTCTTGCTGTCTTGT+TGG 0.378018 1:+99569201 MsG0180006061.01.T01:CDS
ACTTAGATGCCCAGAGGGTA+TGG 0.382973 1:+99566253 MsG0180006061.01.T01:intron
ACCCTTTATATAGCAAATCT+TGG 0.384018 1:+99569240 MsG0180006061.01.T01:CDS
CTTACTGTGAATATGAGTTT+GGG 0.386498 1:+99564594 None:intergenic
TTTGAAGGCCTGCTTTCGGC+CGG 0.392079 1:+99568076 MsG0180006061.01.T01:CDS
GGAAGATTAGTTAAAGCAAC+TGG 0.395251 1:+99569282 MsG0180006061.01.T01:CDS
GACAACAATGCAAATGAAAA+TGG 0.397749 1:+99564690 MsG0180006061.01.T01:CDS
TTTATTATATTTGCATCTGA+TGG 0.398456 1:+99569852 MsG0180006061.01.T01:CDS
TGCGGGTACCCATCGGGACT+GGG 0.399277 1:-99565908 None:intergenic
TATTTGCATCTGATGGGCTC+TGG 0.400975 1:+99569859 MsG0180006061.01.T01:CDS
GTAAACAAGATGGACTATTA+TGG 0.406307 1:+99568138 MsG0180006061.01.T01:CDS
AGGTTTGAAGCTGCTTATCT+TGG 0.415753 1:+99565702 MsG0180006061.01.T01:CDS
AGTCGAAACTTGGCATATAA+TGG 0.416306 1:-99569753 None:intergenic
AACTGATGCACTAGTATTGA+TGG 0.417738 1:-99569813 None:intergenic
ATAGTTGCTACCGTAATTAC+AGG 0.418599 1:+99565451 MsG0180006061.01.T01:CDS
TAATTGGGATCTATACTAGT+AGG 0.418748 1:+99570716 MsG0180006061.01.T01:three_prime_UTR
TGCTTTCGGCCGGGTTCGGA+TGG 0.422995 1:+99568086 MsG0180006061.01.T01:CDS
AAGCTGACAGTTACACATCT+AGG 0.423307 1:+99565418 MsG0180006061.01.T01:CDS
AATGACAATAAATAAAAGTC+AGG 0.425039 1:+99565585 MsG0180006061.01.T01:CDS
AGTTTGAGTTTGAATGAGTC+TGG 0.426624 1:+99568257 MsG0180006061.01.T01:CDS
TTGATAAACCGCGACGTCTC+AGG 0.427072 1:-99568323 None:intergenic
CCATGCGTGAACACGGCCTT+AGG 0.430817 1:-99565640 None:intergenic
GGTGAAATGAGGTATGTTAT+CGG 0.430907 1:+99568040 MsG0180006061.01.T01:intron
GACCCAACTGCTGCAATTTG+CGG 0.431869 1:-99569186 None:intergenic
GGTATTTCTGTTAGAGGAGG+TGG 0.433488 1:+99570607 MsG0180006061.01.T01:CDS
TTCAGACAGATTGTTAAAGA+TGG 0.434159 1:-99570800 None:intergenic
AGAAGAGGGGTTTATGTCAC+TGG 0.439976 1:+99569140 MsG0180006061.01.T01:CDS
TCACCGCAAATTGCAGCAGT+TGG 0.449592 1:+99569183 MsG0180006061.01.T01:CDS
ATTTGCATCTGATGGGCTCT+GGG 0.451624 1:+99569860 MsG0180006061.01.T01:CDS
GATGGTTCTGAGCTCAGTAT+TGG 0.453050 1:-99569795 None:intergenic
GATCAGAGCCAGATTGAATC+TGG 0.453389 1:+99568233 MsG0180006061.01.T01:CDS
ACTCAAAATAAGATTCATCC+TGG 0.454389 1:-99565503 None:intergenic
ATACCCTTCCCCATACCCTC+TGG 0.454984 1:-99566263 None:intergenic
TAAACCCCTCTTCTGTTGCT+TGG 0.457911 1:-99569131 None:intergenic
CACCGCAAATTGCAGCAGTT+GGG 0.458676 1:+99569184 MsG0180006061.01.T01:CDS
ATCCGAACCCGGCCGAAAGC+AGG 0.463029 1:-99568084 None:intergenic
AGTTCAAGCCAATAACTTGC+TGG 0.463611 1:+99568208 MsG0180006061.01.T01:CDS
TTGAAGGCCTGCTTTCGGCC+GGG 0.465199 1:+99568077 MsG0180006061.01.T01:CDS
TTCACGATACACAACATTTG+TGG 0.465649 1:-99565752 None:intergenic
CGGCTGAGGAAGTCGAAACT+TGG 0.465922 1:-99569763 None:intergenic
TCTCGAGTTACTTCTAGAAA+AGG 0.468324 1:+99565682 MsG0180006061.01.T01:CDS
ACCTTTGTTGGCGTCTATGA+TGG 0.469469 1:+99568290 MsG0180006061.01.T01:CDS
ATTGGGAGTTTATCTTCCTA+AGG 0.469634 1:+99565624 MsG0180006061.01.T01:CDS
ATGGGTCTGGGCACGAGTCC+GGG 0.473243 1:+99565969 MsG0180006061.01.T01:CDS
ACGCCAACAAAGGTTCCATA+AGG 0.475151 1:-99568281 None:intergenic
GTGCCCAGACCCATGAAAGC+GGG 0.479321 1:-99565960 None:intergenic
TTGCATGCGCCTGAATTTGA+AGG 0.480230 1:-99565539 None:intergenic
CCTCAGATTTCTAGATGCAT+TGG 0.482645 1:+99569693 MsG0180006061.01.T01:intron
TCAAACTACCAGATTCAATC+TGG 0.487886 1:-99568241 None:intergenic
TGAGGCGTAGGGATGACAAT+TGG 0.491566 1:+99565884 MsG0180006061.01.T01:intron
GCGCGCACAACGTCAGATGC+TGG 0.493872 1:+99568113 MsG0180006061.01.T01:CDS
TTATTATATTTGCATCTGAT+GGG 0.499462 1:+99569853 MsG0180006061.01.T01:CDS
GGGTCAATCTTCATCTCGAT+TGG 0.504628 1:+99565606 MsG0180006061.01.T01:CDS
CTTAGATGCCCAGAGGGTAT+GGG 0.508871 1:+99566254 MsG0180006061.01.T01:intron
TGCCCAGAGGGTATGGGGAA+GGG 0.512656 1:+99566260 MsG0180006061.01.T01:CDS
CGCGCATATCCATCCGAACC+CGG 0.515703 1:-99568095 None:intergenic
TAATCTTCCCAAAACAGCCC+TGG 0.516311 1:-99569268 None:intergenic
GGATAAAACCCCGCTTTCAT+GGG 0.517848 1:+99565951 MsG0180006061.01.T01:CDS
CAGGCCAATGTATTGTGTAA+TGG 0.519683 1:+99565394 MsG0180006061.01.T01:CDS
CGCCAACAAAGGTTCCATAA+GGG 0.521754 1:-99568280 None:intergenic
ATCAATAGAGTCTATAAGAC+AGG 0.522519 1:+99569344 MsG0180006061.01.T01:CDS
CTCAGTATTGGCCTCTTGAA+CGG 0.523336 1:-99569783 None:intergenic
TGAAAATAATAATGTTTGCA+AGG 0.524503 1:+99565726 MsG0180006061.01.T01:CDS
ACTACTACAACAGATAATGA+TGG 0.526156 1:+99570664 MsG0180006061.01.T01:CDS
GCATAATGTTTGGCGTGTGA+AGG 0.529364 1:+99569413 MsG0180006061.01.T01:CDS
AACCCCGCTTTCATGGGTCT+GGG 0.529781 1:+99565957 MsG0180006061.01.T01:CDS
TACCCTTCCCCATACCCTCT+GGG 0.532143 1:-99566262 None:intergenic
CTATTATGGTATAAAGACTC+AGG 0.532513 1:+99568152 MsG0180006061.01.T01:CDS
CATAATGTTTGGCGTGTGAA+GGG 0.533025 1:+99569414 MsG0180006061.01.T01:CDS
GCATTCCAAGCAACAGAAGA+GGG 0.537905 1:+99569126 MsG0180006061.01.T01:CDS
GGTCAATCTTCATCTCGATT+GGG 0.538351 1:+99565607 MsG0180006061.01.T01:CDS
CCTGGTATTTCTGTTAGAGG+AGG 0.538502 1:+99570604 MsG0180006061.01.T01:CDS
GCAAGCACTGTGAAGTTCCC+TGG 0.540576 1:+99570586 MsG0180006061.01.T01:CDS
GACTCAGGGCAGCACATATG+TGG 0.544741 1:+99568167 MsG0180006061.01.T01:CDS
CCTCCTCTAACAGAAATACC+AGG 0.545986 1:-99570604 None:intergenic
ATGCCCAGAGGGTATGGGGA+AGG 0.545992 1:+99566259 MsG0180006061.01.T01:CDS
AATATAATAAATTGATCTTG+AGG 0.547024 1:-99569840 None:intergenic
GACTTCCTCAGCCGTTCAAG+AGG 0.548513 1:+99569772 MsG0180006061.01.T01:CDS
ATTGGCCTCTTGAACGGCTG+AGG 0.549999 1:-99569777 None:intergenic
GCTGATGAGAAACATCGATC+AGG 0.551261 1:+99565375 MsG0180006061.01.T01:CDS
CTGAATTTGAAGGGTAGCCC+TGG 0.554373 1:-99565529 None:intergenic
ACAATTGGACCCAGTCCCGA+TGG 0.557002 1:+99565899 MsG0180006061.01.T01:CDS
TGTCACTGGTTTCGCAGCTG+TGG 0.558786 1:+99569154 MsG0180006061.01.T01:CDS
GTACCAGGGTATTCATTCCC+AGG 0.563464 1:+99565485 MsG0180006061.01.T01:CDS
TCAGGGAATTGCAAGGAGGA+TGG 0.563559 1:+99570420 MsG0180006061.01.T01:intron
AGCTGACAGTTACACATCTA+GGG 0.572728 1:+99565419 MsG0180006061.01.T01:CDS
AGCAAATCTTGGTGATTCCA+GGG 0.574596 1:+99569251 MsG0180006061.01.T01:CDS
TAATGGTTCTCTATTGAACT+CGG 0.575111 1:-99569736 None:intergenic
CAACAATATTTGAATCATCA+GGG 0.575478 1:-99569383 None:intergenic
CTTACCATTACACAATACAT+TGG 0.575927 1:-99565398 None:intergenic
GTCAGTTGATGTAATTCGCA+AGG 0.576319 1:+99569104 MsG0180006061.01.T01:CDS
CTCAAAATAAGATTCATCCT+GGG 0.576672 1:-99565502 None:intergenic
GATGCTGGAGGTAAACAAGA+TGG 0.576681 1:+99568128 MsG0180006061.01.T01:CDS
CCTAAGGCCGTGTTCACGCA+TGG 0.577265 1:+99565640 MsG0180006061.01.T01:CDS
GTGCTCTGTTGATAATTGCA+TGG 0.581373 1:-99569316 None:intergenic
TTAGATGCCCAGAGGGTATG+GGG 0.583554 1:+99566255 MsG0180006061.01.T01:intron
CAATTACAGTGATATCATCA+TGG 0.586712 1:-99570531 None:intergenic
TATTGTTTCAGGGAATTGCA+AGG 0.591708 1:+99570413 MsG0180006061.01.T01:intron
AATGAGTATCTTACAGCGCG+AGG 0.594025 1:-99569927 None:intergenic
TGCATGCGCCTGAATTTGAA+GGG 0.600052 1:-99565538 None:intergenic
GGCATTCCAAGCAACAGAAG+AGG 0.600647 1:+99569125 MsG0180006061.01.T01:CDS
GAGTTGTCCATGCGTGAACA+CGG 0.604527 1:-99565647 None:intergenic
TACCCGAACTCGTACCCTCG+TGG 0.605180 1:-99566298 None:intergenic
ATGACAATAAATAAAAGTCA+GGG 0.613156 1:+99565586 MsG0180006061.01.T01:CDS
ATTAGTTAAAGCAACTGGTG+AGG 0.614946 1:+99569287 MsG0180006061.01.T01:CDS
CGTGCCCAGACCCATGAAAG+CGG 0.620076 1:-99565961 None:intergenic
GGAAATGTCGCCGAACTCCA+CGG 0.621058 1:-99570510 None:intergenic
GATTTAAATAAAATTGACCG+TGG 0.627009 1:+99570493 MsG0180006061.01.T01:CDS
CAATTGGACCCAGTCCCGAT+GGG 0.627164 1:+99565900 MsG0180006061.01.T01:CDS
TTACTGTGAATATGAGTTTG+GGG 0.633479 1:+99564595 None:intergenic
TGCCCAGACCCATGAAAGCG+GGG 0.634345 1:-99565959 None:intergenic
TGGTTACTTTCAATTAAAGG+CGG 0.645123 1:+99564666 MsG0180006061.01.T01:CDS
TATTAAAGTTGTTGCCCACG+AGG 0.646277 1:+99566283 MsG0180006061.01.T01:CDS
TGGCCACTTAGATGCCCAGA+GGG 0.651998 1:+99566248 MsG0180006061.01.T01:intron
TACTGTGAATATGAGTTTGG+GGG 0.652223 1:+99564596 None:intergenic
TAGCATCCCTCACAACACAT+TGG 0.653156 1:+99570633 MsG0180006061.01.T01:CDS
CATTCCAAGCAACAGAAGAG+GGG 0.653186 1:+99569127 MsG0180006061.01.T01:CDS
ACCCGAACTCGTACCCTCGT+GGG 0.653536 1:-99566297 None:intergenic
TCCATCATAGACGCCAACAA+AGG 0.655109 1:-99568291 None:intergenic
GTTGGCGTCTATGATGGACA+TGG 0.658289 1:+99568296 MsG0180006061.01.T01:CDS
TATTATGGTATAAAGACTCA+GGG 0.658621 1:+99568153 MsG0180006061.01.T01:CDS
CATCCTGGGAATGAATACCC+TGG 0.670527 1:-99565488 None:intergenic
AAGGTGCCAATGTGTTGTGA+GGG 0.673166 1:-99570639 None:intergenic
CTCCTCTAACAGAAATACCA+GGG 0.674687 1:-99570603 None:intergenic
ATTAAAGTTGTTGCCCACGA+GGG 0.678475 1:+99566284 MsG0180006061.01.T01:CDS
AAAGGTGCCAATGTGTTGTG+AGG 0.683532 1:-99570640 None:intergenic
ATGGAGGTCCTGAGACGTCG+CGG 0.688834 1:+99568315 MsG0180006061.01.T01:CDS
CGCACAACGTCAGATGCTGG+AGG 0.694925 1:+99568116 MsG0180006061.01.T01:CDS
CAATCTGTCTGAAAGAACTG+TGG 0.707917 1:+99570810 MsG0180006061.01.T01:three_prime_UTR
TGTTTCAGGGAATTGCAAGG+AGG 0.712929 1:+99570416 MsG0180006061.01.T01:intron
ATGGCCACTTAGATGCCCAG+AGG 0.744325 1:+99566247 MsG0180006061.01.T01:intron
GGCGTCTATGATGGACATGG+AGG 0.748970 1:+99568299 MsG0180006061.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTAATTTAATTTAATT+GGG + Chr1:99570701-99570720 MsG0180006061.01.T01:three_prime_UTR 0.0%
!!! TTAATTTAATTTAATTTAAT+TGG + Chr1:99570700-99570719 MsG0180006061.01.T01:three_prime_UTR 0.0%
!! AAATAAAAACAAATAACAAT+CGG + Chr1:99566564-99566583 MsG0180006061.01.T01:intron 10.0%
!! ACATATAAAAAAATCAATTA+TGG - Chr1:99567868-99567887 None:intergenic 10.0%
!!! AATGTAAATATTGTATTTTA+CGG - Chr1:99566525-99566544 None:intergenic 10.0%
!!! TTAACTTATTTGAAATTTTT+TGG + Chr1:99566163-99566182 MsG0180006061.01.T01:intron 10.0%
!!! TTTTTAATCTTAACTAATAA+TGG - Chr1:99569988-99570007 None:intergenic 10.0%
!! AATATAATAAATTGATCTTG+AGG - Chr1:99569843-99569862 None:intergenic 15.0%
!! AGATTGTAAAATTTATTACA+AGG - Chr1:99569669-99569688 None:intergenic 15.0%
!! ATAAACTGAAATATAAACTA+TGG - Chr1:99567829-99567848 None:intergenic 15.0%
!! ATTATATAAATTCGTATATG+TGG - Chr1:99566060-99566079 None:intergenic 15.0%
!! TAATATCCACAAATTTAAAT+GGG + Chr1:99565992-99566011 MsG0180006061.01.T01:intron 15.0%
!! TATATTATGTCACTAATTAT+AGG + Chr1:99565197-99565216 MsG0180006061.01.T01:intron 15.0%
!! TTATATAAATTCGTATATGT+GGG - Chr1:99566059-99566078 None:intergenic 15.0%
!!! ATAAATTCATATTTGGTAAT+CGG - Chr1:99569030-99569049 None:intergenic 15.0%
!!! GATTAAAATCTTGATTTTTA+TGG + Chr1:99567519-99567538 MsG0180006061.01.T01:intron 15.0%
!!! TTACTATCTTTTGTATAAAT+CGG - Chr1:99570883-99570902 None:intergenic 15.0%
!!! TTTATTTTTTACAAAACCAA+TGG - Chr1:99566551-99566570 None:intergenic 15.0%
!!! TTTTTGTTACATATTAGTTT+TGG + Chr1:99564758-99564777 MsG0180006061.01.T01:intron 15.0%
!!! TTTTTTTTAATTTCTTTGTG+AGG + Chr1:99565866-99565885 MsG0180006061.01.T01:intron 15.0%
!! AAAAAAATGCAAAATCTATC+AGG - Chr1:99564741-99564760 None:intergenic 20.0%
!! AAAAAGAAGAAGAAGAAAAA+AGG - Chr1:99567367-99567386 None:intergenic 20.0%
!! AAAAGAAGAAGAAGAAAAAA+GGG - Chr1:99567366-99567385 None:intergenic 20.0%
!! AAATTGTAAAGTTTGGAAAA+TGG + Chr1:99564646-99564665 MsG0180006061.01.T01:CDS 20.0%
!! AACTTCACTTTAAATTTATG+CGG + Chr1:99564966-99564985 MsG0180006061.01.T01:intron 20.0%
!! AATGACAATAAATAAAAGTC+AGG + Chr1:99565585-99565604 MsG0180006061.01.T01:CDS 20.0%
!! ACATAATATATTCGTTAACA+TGG - Chr1:99565187-99565206 None:intergenic 20.0%
!! AGAAAGAAAATTGAGAAAAA+GGG - Chr1:99567485-99567504 None:intergenic 20.0%
!! ATCGCAAACAATTATAATAT+TGG + Chr1:99569563-99569582 MsG0180006061.01.T01:intron 20.0%
!! ATGACAATAAATAAAAGTCA+GGG + Chr1:99565586-99565605 MsG0180006061.01.T01:CDS 20.0%
!! CATAATATATTCGTTAACAT+GGG - Chr1:99565186-99565205 None:intergenic 20.0%
!! GTAATATCCACAAATTTAAA+TGG + Chr1:99565991-99566010 MsG0180006061.01.T01:intron 20.0%
!! GTTCTCTAATCATAAATAAA+AGG - Chr1:99567765-99567784 None:intergenic 20.0%
!! GTTGTAATTAAAATTTGACA+TGG - Chr1:99567060-99567079 None:intergenic 20.0%
!! TCTAGAAAGATTCAAAAAAT+AGG + Chr1:99568490-99568509 MsG0180006061.01.T01:intron 20.0%
!! TGAAAATAATAATGTTTGCA+AGG + Chr1:99565726-99565745 MsG0180006061.01.T01:CDS 20.0%
!! TTATCATAAAGTTATAAGTG+TGG - Chr1:99567082-99567101 None:intergenic 20.0%
!! TTATTATATTTGCATCTGAT+GGG + Chr1:99569853-99569872 MsG0180006061.01.T01:CDS 20.0%
!! TTTATTATATTTGCATCTGA+TGG + Chr1:99569852-99569871 MsG0180006061.01.T01:CDS 20.0%
!!! AAATAAGTTAAGCAGTTTTT+AGG - Chr1:99566154-99566173 None:intergenic 20.0%
!!! AAATGGTTACTTTCAATTAA+AGG + Chr1:99564663-99564682 MsG0180006061.01.T01:CDS 20.0%
!!! ATGTTTTATGTTATTGTTTC+AGG + Chr1:99570402-99570421 MsG0180006061.01.T01:intron 20.0%
!!! GATCACATATAATTTGTTAT+AGG + Chr1:99570333-99570352 MsG0180006061.01.T01:intron 20.0%
!!! TAAATTCATATTTGGTAATC+GGG - Chr1:99569029-99569048 None:intergenic 20.0%
!!! TGCAAACGTTAAATTTTTTA+CGG - Chr1:99566623-99566642 None:intergenic 20.0%
!!! TGTTTTATGTTATTGTTTCA+GGG + Chr1:99570403-99570422 MsG0180006061.01.T01:intron 20.0%
!!! TTAAATTGCATATCTTTTGA+AGG + Chr1:99570763-99570782 MsG0180006061.01.T01:three_prime_UTR 20.0%
!!! TTCAGTTCTTTTTAATTGAA+AGG - Chr1:99567650-99567669 None:intergenic 20.0%
!!! TTGTTTTAAAGCATAATGTT+TGG + Chr1:99569403-99569422 MsG0180006061.01.T01:CDS 20.0%
!!! TTTTTAGACTGAAAACTTAA+GGG + Chr1:99570023-99570042 MsG0180006061.01.T01:intron 20.0%
!!! TTTTTTGACTGAAAACTTAA+GGG + Chr1:99570189-99570208 MsG0180006061.01.T01:intron 20.0%
! AAAATTTGTGCGGATAATTT+AGG + Chr1:99570285-99570304 MsG0180006061.01.T01:intron 25.0%
! AAAGAAGAAGAAGAAAAAAG+GGG - Chr1:99567365-99567384 None:intergenic 25.0%
! AATGTATTGTCGAATAATTC+AGG - Chr1:99568902-99568921 None:intergenic 25.0%
! ACAACAATATTTGAATCATC+AGG - Chr1:99569387-99569406 None:intergenic 25.0%
! ATCAATTAAAAGTCAATGAC+AGG - Chr1:99566450-99566469 None:intergenic 25.0%
! ATGAGACAGAAATATTATCT+CGG - Chr1:99568551-99568570 None:intergenic 25.0%
! CAACAATATTTGAATCATCA+GGG - Chr1:99569386-99569405 None:intergenic 25.0%
! CAATATTTACATTAGACCAT+TGG + Chr1:99566532-99566551 MsG0180006061.01.T01:intron 25.0%
! CAATGTAAAAATGTCAACAA+TGG + Chr1:99567570-99567589 MsG0180006061.01.T01:intron 25.0%
! GAGAAAGAAAATTGAGAAAA+AGG - Chr1:99567486-99567505 None:intergenic 25.0%
! GATCTTACCAAAGAATTTAT+TGG - Chr1:99567463-99567482 None:intergenic 25.0%
! GATTTAAATAAAATTGACCG+TGG + Chr1:99570493-99570512 MsG0180006061.01.T01:CDS 25.0%
! GGTGTGTATAAATATAGTTT+GGG - Chr1:99566601-99566620 None:intergenic 25.0%
! TACTACTTTACTTGTGAAAT+GGG - Chr1:99567303-99567322 None:intergenic 25.0%
! TACTCTTAAGATGTTGAAAT+AGG - Chr1:99568355-99568374 None:intergenic 25.0%
! TAGATCTGGGTATTTATTTA+TGG - Chr1:99567393-99567412 None:intergenic 25.0%
! TATGTGATCTCTATAAATCA+TGG - Chr1:99570322-99570341 None:intergenic 25.0%
! TATTATGGTATAAAGACTCA+GGG + Chr1:99568153-99568172 MsG0180006061.01.T01:CDS 25.0%
! TCTTAATGTATTAAAAGCTC+TGG + Chr1:99565307-99565326 MsG0180006061.01.T01:intron 25.0%
! TCTTCATCCAATAAATTCTT+TGG + Chr1:99567453-99567472 MsG0180006061.01.T01:intron 25.0%
! TGAGTAATCTTGACTAATAA+TGG - Chr1:99570122-99570141 None:intergenic 25.0%
! TTAAATTTGTGGATATTACC+CGG - Chr1:99565990-99566009 None:intergenic 25.0%
! TTATCTGTTGTAGTAGTAAA+AGG - Chr1:99570661-99570680 None:intergenic 25.0%
!! AACGTTTTTATTGCAAGTAT+CGG + Chr1:99570059-99570078 MsG0180006061.01.T01:intron 25.0%
!! ATTCTTTTGTTGGTATATAC+TGG - Chr1:99568580-99568599 None:intergenic 25.0%
!! CTTTTTAGACTGAAAACTTA+AGG + Chr1:99570022-99570041 MsG0180006061.01.T01:intron 25.0%
!! TTCTAGATAAGTGATTTTCT+TGG - Chr1:99568477-99568496 None:intergenic 25.0%
!! TTTTTGTGGCATTAATTCAA+TGG - Chr1:99568706-99568725 None:intergenic 25.0%
!!! ACCAAGATTTGCTATATAAA+GGG - Chr1:99569244-99569263 None:intergenic 25.0%
!!! ATAAACAGGATTTTTGTTTG+TGG + Chr1:99570851-99570870 MsG0180006061.01.T01:three_prime_UTR 25.0%
!!! ATTTTCTTGGTTCTAAAAGA+TGG - Chr1:99568464-99568483 None:intergenic 25.0%
!!! CTTTTTTGACTGAAAACTTA+AGG + Chr1:99570188-99570207 MsG0180006061.01.T01:intron 25.0%
!!! GATTACAAAGTACTTTTCTT+GGG - Chr1:99568811-99568830 None:intergenic 25.0%
!!! GCAAACGTTAAATTTTTTAC+GGG - Chr1:99566622-99566641 None:intergenic 25.0%
!!! TGTATATCTGCTATTTTTTG+TGG - Chr1:99568720-99568739 None:intergenic 25.0%
!!! TTTTAATTGATGCACTTTTC+AGG + Chr1:99566459-99566478 MsG0180006061.01.T01:intron 25.0%
!!! TTTTCTTGGTTCTAAAAGAT+GGG - Chr1:99568463-99568482 None:intergenic 25.0%
!!! TTTTTTCTCTGACCAATTTT+TGG - Chr1:99567616-99567635 None:intergenic 25.0%
AAACAAATGATTGAGCTAAG+TGG - Chr1:99568941-99568960 None:intergenic 30.0%
AAGAAGAAGAAGAAAAAAGG+GGG - Chr1:99567364-99567383 None:intergenic 30.0%
AATTAAAAGTCAATGACAGG+AGG - Chr1:99566447-99566466 None:intergenic 30.0%
AATTGGTCAGAGAAAAAAGT+TGG + Chr1:99567618-99567637 MsG0180006061.01.T01:intron 30.0%
ACCCTTTATATAGCAAATCT+TGG + Chr1:99569240-99569259 MsG0180006061.01.T01:CDS 30.0%
ACTACTACAACAGATAATGA+TGG + Chr1:99570664-99570683 MsG0180006061.01.T01:CDS 30.0%
ACTCAAAATAAGATTCATCC+TGG - Chr1:99565506-99565525 None:intergenic 30.0%
AGTAAAGTTTGGTCAAAGAT+TGG + Chr1:99568849-99568868 MsG0180006061.01.T01:intron 30.0%
ATATTGAGCTGACCAAAAAT+TGG + Chr1:99567601-99567620 MsG0180006061.01.T01:intron 30.0%
ATCAATAGAGTCTATAAGAC+AGG + Chr1:99569344-99569363 MsG0180006061.01.T01:CDS 30.0%
ATTTCATGAAACTTGGAAGT+TGG + Chr1:99569642-99569661 MsG0180006061.01.T01:intron 30.0%
CAAAAATCCTGTTTATGAAG+TGG - Chr1:99570847-99570866 None:intergenic 30.0%
CAATTACAGTGATATCATCA+TGG - Chr1:99570534-99570553 None:intergenic 30.0%
CACGAAGAAATTGTAAAGTT+TGG + Chr1:99564639-99564658 MsG0180006061.01.T01:CDS 30.0%
CTACTACTTTACTTGTGAAA+TGG - Chr1:99567304-99567323 None:intergenic 30.0%
CTATTATGGTATAAAGACTC+AGG + Chr1:99568152-99568171 MsG0180006061.01.T01:CDS 30.0%
CTCAAAATAAGATTCATCCT+GGG - Chr1:99565505-99565524 None:intergenic 30.0%
CTTACCATTACACAATACAT+TGG - Chr1:99565401-99565420 None:intergenic 30.0%
CTTTCTCTACTTCAAATTTC+AGG + Chr1:99569057-99569076 MsG0180006061.01.T01:intron 30.0%
GACAACAATGCAAATGAAAA+TGG + Chr1:99564690-99564709 MsG0180006061.01.T01:CDS 30.0%
GATAAGAGTTTAGTGCAAAA+TGG + Chr1:99570374-99570393 MsG0180006061.01.T01:intron 30.0%
GGGTGTGTATAAATATAGTT+TGG - Chr1:99566602-99566621 None:intergenic 30.0%
GTTCTTCATTTCATGAAACT+TGG + Chr1:99569635-99569654 MsG0180006061.01.T01:intron 30.0%
GTTTGTGTACAAAATTTGTG+CGG + Chr1:99570275-99570294 MsG0180006061.01.T01:intron 30.0%
TAATGGTTCTCTATTGAACT+CGG - Chr1:99569739-99569758 None:intergenic 30.0%
TAATTGGGATCTATACTAGT+AGG + Chr1:99570716-99570735 MsG0180006061.01.T01:three_prime_UTR 30.0%
TACCGTAATTACAGGAAAAA+TGG + Chr1:99565459-99565478 MsG0180006061.01.T01:CDS 30.0%
TCCACAAATTTAAATGGGTA+CGG + Chr1:99565997-99566016 MsG0180006061.01.T01:intron 30.0%
TGACCAAACTTTACTTATCT+CGG - Chr1:99568844-99568863 None:intergenic 30.0%
TTAATGTCCACTTCATAAAC+AGG + Chr1:99570837-99570856 MsG0180006061.01.T01:three_prime_UTR 30.0%
TTAGATGTTGAAATCCTTGA+TGG + Chr1:99568011-99568030 MsG0180006061.01.T01:intron 30.0%
TTCAGACAGATTGTTAAAGA+TGG - Chr1:99570803-99570822 None:intergenic 30.0%
TTTACTTGTGAAATGGGAAT+GGG - Chr1:99567297-99567316 None:intergenic 30.0%
TTTCATGAAACTTGGAAGTT+GGG + Chr1:99569643-99569662 MsG0180006061.01.T01:intron 30.0%
! ATCGTTTTCATTGCAAGTAT+CGG + Chr1:99570237-99570256 MsG0180006061.01.T01:intron 30.0%
! CTGTTTAATTGCATGCATTT+TGG + Chr1:99568769-99568788 MsG0180006061.01.T01:intron 30.0%
! GTCTTTTCATAGTTAAAGTG+CGG + Chr1:99566221-99566240 MsG0180006061.01.T01:intron 30.0%
! TCTTTTCATAGTTAAAGTGC+GGG + Chr1:99566222-99566241 MsG0180006061.01.T01:intron 30.0%
! TGGTTACTTTCAATTAAAGG+CGG + Chr1:99564666-99564685 MsG0180006061.01.T01:CDS 30.0%
!! AGAACCCAATTTCTGTTTTT+GGG + Chr1:99567780-99567799 MsG0180006061.01.T01:intron 30.0%
!! ATGTAATTTCTAGTACACCT+AGG - Chr1:99566398-99566417 None:intergenic 30.0%
!! CACCAAGATTTGCTATATAA+AGG - Chr1:99569245-99569264 None:intergenic 30.0%
!! CTTGTTGGTGTTATTTGTAA+TGG + Chr1:99569216-99569235 MsG0180006061.01.T01:CDS 30.0%
!! GGATTACAAAGTACTTTTCT+TGG - Chr1:99568812-99568831 None:intergenic 30.0%
!! GTAAACAAGATGGACTATTA+TGG + Chr1:99568138-99568157 MsG0180006061.01.T01:CDS 30.0%
!! TGTAATTTCTAGTACACCTA+GGG - Chr1:99566397-99566416 None:intergenic 30.0%
!!! AATCTTATTTTGAGTGATCC+AGG + Chr1:99565511-99565530 MsG0180006061.01.T01:CDS 30.0%
!!! ACATGCATTTTTTACAAACG+CGG + Chr1:99566320-99566339 MsG0180006061.01.T01:intron 30.0%
!!! ATCTTATTTTGAGTGATCCA+GGG + Chr1:99565512-99565531 MsG0180006061.01.T01:CDS 30.0%
!!! TGCCATTTTTCCTGTAATTA+CGG - Chr1:99565464-99565483 None:intergenic 30.0%
AGAAAAGCCTTAAATTCCCT+TGG + Chr1:99569598-99569617 MsG0180006061.01.T01:intron 35.0%
AGAAGAAGAAGAAAAAAGGG+GGG - Chr1:99567363-99567382 None:intergenic 35.0%
AGTCGAAACTTGGCATATAA+TGG - Chr1:99569756-99569775 None:intergenic 35.0%
ATAAAATTGACCGTGGAGTT+CGG + Chr1:99570500-99570519 MsG0180006061.01.T01:CDS 35.0%
ATAGTTGCTACCGTAATTAC+AGG + Chr1:99565451-99565470 MsG0180006061.01.T01:CDS 35.0%
ATCTCTATAAATCATGGCAC+AGG - Chr1:99570316-99570335 None:intergenic 35.0%
ATGTTTCTCATCAGCATAAC+TGG - Chr1:99565370-99565389 None:intergenic 35.0%
ATTAGTTAAAGCAACTGGTG+AGG + Chr1:99569287-99569306 MsG0180006061.01.T01:CDS 35.0%
ATTGGGAGTTTATCTTCCTA+AGG + Chr1:99565624-99565643 MsG0180006061.01.T01:CDS 35.0%
ATTTCACCAAACAACCATCA+AGG - Chr1:99568028-99568047 None:intergenic 35.0%
CAATGCATCTAGAAATCTGA+GGG - Chr1:99569695-99569714 None:intergenic 35.0%
CACAAATCCAAGGGAATTTA+AGG - Chr1:99569608-99569627 None:intergenic 35.0%
CCACAAATTTAAATGGGTAC+GGG + Chr1:99565998-99566017 MsG0180006061.01.T01:intron 35.0%
CGTGTGAAATCATTAGATCT+GGG - Chr1:99567406-99567425 None:intergenic 35.0%
CTATCAGAGACTATCTGTTA+TGG - Chr1:99569520-99569539 None:intergenic 35.0%
CTTAGTTTCAACCAGTGATT+TGG - Chr1:99565337-99565356 None:intergenic 35.0%
CTTTACTTGTGAAATGGGAA+TGG - Chr1:99567298-99567317 None:intergenic 35.0%
GAAAACACAAGTTCAAATCC+TGG - Chr1:99568880-99568899 None:intergenic 35.0%
GACACCCAAAAACAGAAATT+GGG - Chr1:99567787-99567806 None:intergenic 35.0%
GGTGAAATGAGGTATGTTAT+CGG + Chr1:99568040-99568059 MsG0180006061.01.T01:intron 35.0%
GTAATTACAGGAAAAATGGC+AGG + Chr1:99565463-99565482 MsG0180006061.01.T01:CDS 35.0%
GTACTTTGTAATCCAGAGTT+TGG + Chr1:99568818-99568837 MsG0180006061.01.T01:intron 35.0%
GTTCATGTTGTTGTAGTTTG+TGG + Chr1:99567896-99567915 MsG0180006061.01.T01:intron 35.0%
TAATTTCTTTGTGAGGCGTA+GGG + Chr1:99565873-99565892 MsG0180006061.01.T01:intron 35.0%
TACACGTACTAAGAAAACAG+TGG + Chr1:99568736-99568755 MsG0180006061.01.T01:intron 35.0%
TATTGTTTCAGGGAATTGCA+AGG + Chr1:99570413-99570432 MsG0180006061.01.T01:intron 35.0%
TCAAACTACCAGATTCAATC+TGG - Chr1:99568244-99568263 None:intergenic 35.0%
TGAAAACTTAAGGGTCTGTA+TGG + Chr1:99570198-99570217 MsG0180006061.01.T01:intron 35.0%
TGACACCCAAAAACAGAAAT+TGG - Chr1:99567788-99567807 None:intergenic 35.0%
TTAATTTCTTTGTGAGGCGT+AGG + Chr1:99565872-99565891 MsG0180006061.01.T01:intron 35.0%
TTCACGATACACAACATTTG+TGG - Chr1:99565755-99565774 None:intergenic 35.0%
! AAATTCGTATATGTGGGTTG+CGG - Chr1:99566053-99566072 None:intergenic 35.0%
! AACTGATGCACTAGTATTGA+TGG - Chr1:99569816-99569835 None:intergenic 35.0%
! AGTTTGAGTTTGAATGAGTC+TGG + Chr1:99568257-99568276 MsG0180006061.01.T01:CDS 35.0%
! ATACTTCTGTGACTTGTGTT+TGG + Chr1:99567542-99567561 MsG0180006061.01.T01:intron 35.0%
! ATAGAGTCTACTTGTTGCTT+TGG + Chr1:99568429-99568448 MsG0180006061.01.T01:intron 35.0%
! CAAATCACTGGTTGAAACTA+AGG + Chr1:99565335-99565354 MsG0180006061.01.T01:intron 35.0%
! GAGAACCCAATTTCTGTTTT+TGG + Chr1:99567779-99567798 MsG0180006061.01.T01:intron 35.0%
! GGAAGATTAGTTAAAGCAAC+TGG + Chr1:99569282-99569301 MsG0180006061.01.T01:CDS 35.0%
! GGAGTTAGTGAACTTTTTGA+AGG + Chr1:99568061-99568080 MsG0180006061.01.T01:CDS 35.0%
! TCATCATCATTGTTGTTGTG+AGG + Chr1:99567932-99567951 MsG0180006061.01.T01:intron 35.0%
! TCTCGAGTTACTTCTAGAAA+AGG + Chr1:99565682-99565701 MsG0180006061.01.T01:CDS 35.0%
! TGAAAACTTAAGGGTATGTG+TGG + Chr1:99570032-99570051 MsG0180006061.01.T01:intron 35.0%
! TGAAATCCTTGATGGTTGTT+TGG + Chr1:99568019-99568038 MsG0180006061.01.T01:intron 35.0%
!! CAGTTTTTAGGCTTAGGTTT+AGG - Chr1:99566142-99566161 None:intergenic 35.0%
!! CATATGTGGTGATTTTTCGA+TGG + Chr1:99568181-99568200 MsG0180006061.01.T01:CDS 35.0%
!! GTTAAGCAGTTTTTAGGCTT+AGG - Chr1:99566148-99566167 None:intergenic 35.0%
!!! ATTTTTTACAAACGCGGGTA+TGG + Chr1:99566326-99566345 MsG0180006061.01.T01:intron 35.0%
!!! CATGCATTTTTTACAAACGC+GGG + Chr1:99566321-99566340 MsG0180006061.01.T01:intron 35.0%
AAAAAATACCCACAACGGGT+AGG + Chr1:99565930-99565949 MsG0180006061.01.T01:CDS 40.0%
AACGTTTGCATTCACAGACT+AGG + Chr1:99566633-99566652 MsG0180006061.01.T01:intron 40.0%
AAGAAGAAGAAAAAAGGGGG+GGG - Chr1:99567361-99567380 None:intergenic 40.0%
AAGCTGACAGTTACACATCT+AGG + Chr1:99565418-99565437 MsG0180006061.01.T01:CDS 40.0%
AATTTAAATGGGTACGGGCA+CGG + Chr1:99566003-99566022 MsG0180006061.01.T01:intron 40.0%
AGCTGACAGTTACACATCTA+GGG + Chr1:99565419-99565438 MsG0180006061.01.T01:CDS 40.0%
ATGGTATGCTCGTAGTCAAT+TGG - Chr1:99568687-99568706 None:intergenic 40.0%
ATTAAAGTTGTTGCCCACGA+GGG + Chr1:99566284-99566303 MsG0180006061.01.T01:CDS 40.0%
CAATCTGTCTGAAAGAACTG+TGG + Chr1:99570810-99570829 MsG0180006061.01.T01:three_prime_UTR 40.0%
CAGACAAGGTCCATAAAAAG+CGG - Chr1:99567251-99567270 None:intergenic 40.0%
CAGGCCAATGTATTGTGTAA+TGG + Chr1:99565394-99565413 MsG0180006061.01.T01:CDS 40.0%
CATAATGTTTGGCGTGTGAA+GGG + Chr1:99569414-99569433 MsG0180006061.01.T01:CDS 40.0%
CATAGTTAAAGTGCGGGTAA+TGG + Chr1:99566228-99566247 MsG0180006061.01.T01:intron 40.0%
CCAATGCATCTAGAAATCTG+AGG - Chr1:99569696-99569715 None:intergenic 40.0%
CCCGTACCCATTTAAATTTG+TGG - Chr1:99566001-99566020 None:intergenic 40.0%
CTAATTTCCCATGCTTAGCA+CGG + Chr1:99565108-99565127 MsG0180006061.01.T01:intron 40.0%
CTATAGTGAGTGAAAGCTGT+AGG + Chr1:99567988-99568007 MsG0180006061.01.T01:intron 40.0%
CTCCTCTAACAGAAATACCA+GGG - Chr1:99570606-99570625 None:intergenic 40.0%
CTCTGATTCTGTTTGTCGAT+CGG + Chr1:99565241-99565260 MsG0180006061.01.T01:intron 40.0%
CTGATCTTCCAGCAAGTTAT+TGG - Chr1:99568219-99568238 None:intergenic 40.0%
GAAGAAGAAGAAAAAAGGGG+GGG - Chr1:99567362-99567381 None:intergenic 40.0%
GATTGAGCTAAGTGGTTGAT+GGG - Chr1:99568933-99568952 None:intergenic 40.0%
GCGTGTGAAATCATTAGATC+TGG - Chr1:99567407-99567426 None:intergenic 40.0%
GGAGTAACATAGCATAGCAT+TGG + Chr1:99567178-99567197 MsG0180006061.01.T01:intron 40.0%
GGTCAATCTTCATCTCGATT+GGG + Chr1:99565607-99565626 MsG0180006061.01.T01:CDS 40.0%
TAATTTCCCATGCTTAGCAC+GGG + Chr1:99565109-99565128 MsG0180006061.01.T01:intron 40.0%
TACTATAGTACCCTACCCAT+GGG + Chr1:99566356-99566375 MsG0180006061.01.T01:intron 40.0%
TATTAAAGTTGTTGCCCACG+AGG + Chr1:99566283-99566302 MsG0180006061.01.T01:CDS 40.0%
TCAACTTTAGCTGCTGTAGA+TGG + Chr1:99567684-99567703 MsG0180006061.01.T01:intron 40.0%
TCTGATTCTGTTTGTCGATC+GGG + Chr1:99565242-99565261 MsG0180006061.01.T01:intron 40.0%
TGATTGAGCTAAGTGGTTGA+TGG - Chr1:99568934-99568953 None:intergenic 40.0%
TGGCCGAGATAAGTAAAGTT+TGG + Chr1:99568838-99568857 MsG0180006061.01.T01:intron 40.0%
TTAGCACGGGTATCATACTA+GGG + Chr1:99565122-99565141 MsG0180006061.01.T01:intron 40.0%
! AATTCGTATATGTGGGTTGC+GGG - Chr1:99566052-99566071 None:intergenic 40.0%
! AGCAAATCTTGGTGATTCCA+GGG + Chr1:99569251-99569270 MsG0180006061.01.T01:CDS 40.0%
! AGGTTTGAAGCTGCTTATCT+TGG + Chr1:99565702-99565721 MsG0180006061.01.T01:CDS 40.0%
! AGTTCAAGCCAATAACTTGC+TGG + Chr1:99568208-99568227 MsG0180006061.01.T01:CDS 40.0%
! ATTGTTGTTGTGAGGATTGC+AGG + Chr1:99567940-99567959 MsG0180006061.01.T01:intron 40.0%
! CACTGGTTGAAACTAAGGTT+AGG + Chr1:99565340-99565359 MsG0180006061.01.T01:intron 40.0%
! CATAGCATAGCATTGGAATG+TGG + Chr1:99567185-99567204 MsG0180006061.01.T01:intron 40.0%
! CATGTTGTTGTAGTTTGTGG+TGG + Chr1:99567899-99567918 MsG0180006061.01.T01:intron 40.0%
! CCTCAGATTTCTAGATGCAT+TGG + Chr1:99569693-99569712 MsG0180006061.01.T01:intron 40.0%
! GATGGTTGTTTGGTGAAATG+AGG + Chr1:99568029-99568048 MsG0180006061.01.T01:intron 40.0%
! GTCAGTTGATGTAATTCGCA+AGG + Chr1:99569104-99569123 MsG0180006061.01.T01:CDS 40.0%
! TACTTTTCTTGGGAACCTGA+GGG - Chr1:99568801-99568820 None:intergenic 40.0%
! TAGCAAATCTTGGTGATTCC+AGG + Chr1:99569250-99569269 MsG0180006061.01.T01:CDS 40.0%
! TTCCCTGGTATTTCTGTTAG+AGG + Chr1:99570601-99570620 MsG0180006061.01.T01:CDS 40.0%
!! ACTTTTTGAAGGCCTGCTTT+CGG + Chr1:99568072-99568091 MsG0180006061.01.T01:CDS 40.0%
!! ATTTCTAGTACACCTAGGGA+TGG - Chr1:99566393-99566412 None:intergenic 40.0%
!! GTGCTCTGTTGATAATTGCA+TGG - Chr1:99569319-99569338 None:intergenic 40.0%
!! TGAGCTTCTGAGACTCTTAT+GGG + Chr1:99564786-99564805 MsG0180006061.01.T01:intron 40.0%
!! TTGAGCTTCTGAGACTCTTA+TGG + Chr1:99564785-99564804 MsG0180006061.01.T01:intron 40.0%
!!! AGTTTTTTATTCCCCGTGCT+TGG + Chr1:99567135-99567154 MsG0180006061.01.T01:intron 40.0%
!!! TATTTTTTGCGGGTACCCAT+CGG - Chr1:99565918-99565937 None:intergenic 40.0%
AACACAAGCGCACAAATCCA+AGG - Chr1:99569618-99569637 None:intergenic 45.0%
AATGAGTATCTTACAGCGCG+AGG - Chr1:99569930-99569949 None:intergenic 45.0%
ACACAAGCGCACAAATCCAA+GGG - Chr1:99569617-99569636 None:intergenic 45.0%
ACCTTTGTTGGCGTCTATGA+TGG + Chr1:99568290-99568309 MsG0180006061.01.T01:CDS 45.0%
ACGCCAACAAAGGTTCCATA+AGG - Chr1:99568284-99568303 None:intergenic 45.0%
ACTATAGTACCCTACCCATG+GGG + Chr1:99566357-99566376 MsG0180006061.01.T01:intron 45.0%
AGAAGAGGGGTTTATGTCAC+TGG + Chr1:99569140-99569159 MsG0180006061.01.T01:CDS 45.0%
AGGAAAAATGGCAGGTACCA+GGG + Chr1:99565471-99565490 MsG0180006061.01.T01:CDS 45.0%
AGGATAAAACCCCGCTTTCA+TGG + Chr1:99565950-99565969 MsG0180006061.01.T01:CDS 45.0%
ATGATACCCGTGCTAAGCAT+GGG - Chr1:99565118-99565137 None:intergenic 45.0%
ATTTAAATGGGTACGGGCAC+GGG + Chr1:99566004-99566023 MsG0180006061.01.T01:intron 45.0%
CAAGGTCCATAAAAAGCGGT+TGG - Chr1:99567247-99567266 None:intergenic 45.0%
CATTCCAAGCAACAGAAGAG+GGG + Chr1:99569127-99569146 MsG0180006061.01.T01:CDS 45.0%
CCCGCAAAAAATACCCACAA+CGG + Chr1:99565925-99565944 MsG0180006061.01.T01:CDS 45.0%
CCGCAAAAAATACCCACAAC+GGG + Chr1:99565926-99565945 MsG0180006061.01.T01:CDS 45.0%
CCTCCTCTAACAGAAATACC+AGG - Chr1:99570607-99570626 None:intergenic 45.0%
CGCCAACAAAGGTTCCATAA+GGG - Chr1:99568283-99568302 None:intergenic 45.0%
CTAAGCAGAGGTTCACCAAT+GGG - Chr1:99567218-99567237 None:intergenic 45.0%
CTTAGCACGGGTATCATACT+AGG + Chr1:99565121-99565140 MsG0180006061.01.T01:intron 45.0%
CTTTAGCTGCTGTAGATGGA+TGG + Chr1:99567688-99567707 MsG0180006061.01.T01:intron 45.0%
GATCAGAGCCAGATTGAATC+TGG + Chr1:99568233-99568252 MsG0180006061.01.T01:CDS 45.0%
GATGCTGGAGGTAAACAAGA+TGG + Chr1:99568128-99568147 MsG0180006061.01.T01:CDS 45.0%
GCATAATGTTTGGCGTGTGA+AGG + Chr1:99569413-99569432 MsG0180006061.01.T01:CDS 45.0%
GCATTCCAAGCAACAGAAGA+GGG + Chr1:99569126-99569145 MsG0180006061.01.T01:CDS 45.0%
GCTGATGAGAAACATCGATC+AGG + Chr1:99565375-99565394 MsG0180006061.01.T01:CDS 45.0%
GCTGCAATTTGCGGTGAAAT+TGG - Chr1:99569180-99569199 None:intergenic 45.0%
GGATAAAACCCCGCTTTCAT+GGG + Chr1:99565951-99565970 MsG0180006061.01.T01:CDS 45.0%
GGGTCAATCTTCATCTCGAT+TGG + Chr1:99565606-99565625 MsG0180006061.01.T01:CDS 45.0%
GTACTATAGTACCCTACCCA+TGG + Chr1:99566355-99566374 MsG0180006061.01.T01:intron 45.0%
TAAACCCCTCTTCTGTTGCT+TGG - Chr1:99569134-99569153 None:intergenic 45.0%
TAAGCGCACTTTGATCCTTG+AGG - Chr1:99564822-99564841 None:intergenic 45.0%
TAATCTTCCCAAAACAGCCC+TGG - Chr1:99569271-99569290 None:intergenic 45.0%
TACTTATCTCGGCCAAACTC+TGG - Chr1:99568833-99568852 None:intergenic 45.0%
TAGCACGGGTATCATACTAG+GGG + Chr1:99565123-99565142 MsG0180006061.01.T01:intron 45.0%
TAGCATCCCTCACAACACAT+TGG + Chr1:99570633-99570652 MsG0180006061.01.T01:CDS 45.0%
TAGGGGGGAAAAACTTAGCA+CGG + Chr1:99565140-99565159 MsG0180006061.01.T01:intron 45.0%
TATGATACCCGTGCTAAGCA+TGG - Chr1:99565119-99565138 None:intergenic 45.0%
TCCATCATAGACGCCAACAA+AGG - Chr1:99568294-99568313 None:intergenic 45.0%
TCGAGTTTCAGCTCAATGGT+TGG + Chr1:99568653-99568672 MsG0180006061.01.T01:intron 45.0%
TGCATGCGCCTGAATTTGAA+GGG - Chr1:99565541-99565560 None:intergenic 45.0%
TGTTTCAGGGAATTGCAAGG+AGG + Chr1:99570416-99570435 MsG0180006061.01.T01:intron 45.0%
TTGAATGAGTCTGGCCCTTA+TGG + Chr1:99568266-99568285 MsG0180006061.01.T01:CDS 45.0%
TTGCATGCGCCTGAATTTGA+AGG - Chr1:99565542-99565561 None:intergenic 45.0%
! AAGGTGCCAATGTGTTGTGA+GGG - Chr1:99570642-99570661 None:intergenic 45.0%
! CATAGCATTGGAATGTGGTG+TGG + Chr1:99567190-99567209 MsG0180006061.01.T01:intron 45.0%
! CCTGGTATTTCTGTTAGAGG+AGG + Chr1:99570604-99570623 MsG0180006061.01.T01:CDS 45.0%
! GAGTTCGAGTTTCAGCTCAA+TGG + Chr1:99568649-99568668 MsG0180006061.01.T01:intron 45.0%
! GGTATTTCTGTTAGAGGAGG+TGG + Chr1:99570607-99570626 MsG0180006061.01.T01:CDS 45.0%
! GTACTTTTCTTGGGAACCTG+AGG - Chr1:99568802-99568821 None:intergenic 45.0%
!! AAAGGTGCCAATGTGTTGTG+AGG - Chr1:99570643-99570662 None:intergenic 45.0%
!! ATTTGCATCTGATGGGCTCT+GGG + Chr1:99569860-99569879 MsG0180006061.01.T01:CDS 45.0%
!! CTCAGTATTGGCCTCTTGAA+CGG - Chr1:99569786-99569805 None:intergenic 45.0%
!! GATGGTTCTGAGCTCAGTAT+TGG - Chr1:99569798-99569817 None:intergenic 45.0%
!! GCTCTGGAATTCCAAATCAC+TGG + Chr1:99565323-99565342 MsG0180006061.01.T01:intron 45.0%
!! GGTTTTATCCTACCCGTTGT+GGG - Chr1:99565941-99565960 None:intergenic 45.0%
!! TATTTGCATCTGATGGGCTC+TGG + Chr1:99569859-99569878 MsG0180006061.01.T01:CDS 45.0%
!! TGCAAGTATCGGTCATGCTT+GGG + Chr1:99570070-99570089 MsG0180006061.01.T01:intron 45.0%
!! TTGCAAGTATCGGTCATGCT+TGG + Chr1:99570069-99570088 MsG0180006061.01.T01:intron 45.0%
!!! ATTTTTTGCGGGTACCCATC+GGG - Chr1:99565917-99565936 None:intergenic 45.0%
!!! CCCGTTGTGGGTATTTTTTG+CGG - Chr1:99565929-99565948 None:intergenic 45.0%
!!! CCGTTGTGGGTATTTTTTGC+GGG - Chr1:99565928-99565947 None:intergenic 45.0%
!!! GCATTTTGGTCTTAACCCTC+AGG + Chr1:99568783-99568802 MsG0180006061.01.T01:intron 45.0%
!! AATATATATAAATTCATATT+TGG - Chr1:99569037-99569056 None:intergenic 5.0%
!!! ATAAATAATTTATTTACTTT+TGG + Chr1:99566083-99566102 MsG0180006061.01.T01:intron 5.0%
AAGAAGGAGTGAGGCAGACA+AGG - Chr1:99567265-99567284 None:intergenic 50.0%
ACAAACGCGGGTATGGAGAT+GGG + Chr1:99566333-99566352 MsG0180006061.01.T01:intron 50.0%
ACTTAGATGCCCAGAGGGTA+TGG + Chr1:99566253-99566272 MsG0180006061.01.T01:intron 50.0%
AGCACGGGTATCATACTAGG+GGG + Chr1:99565124-99565143 MsG0180006061.01.T01:intron 50.0%
AGGGGGGAAAAACTTAGCAC+GGG + Chr1:99565141-99565160 MsG0180006061.01.T01:intron 50.0%
AGTACACCTAGGGATGGCAA+TGG - Chr1:99566387-99566406 None:intergenic 50.0%
ATACCCTCTGGGCATCTAAG+TGG - Chr1:99566254-99566273 None:intergenic 50.0%
ATGGGTCAAGACACACCTCA+AGG + Chr1:99564804-99564823 MsG0180006061.01.T01:intron 50.0%
ATTCTGATGTCCAGAGCGAG+TGG + Chr1:99565270-99565289 MsG0180006061.01.T01:intron 50.0%
CACCGCAAATTGCAGCAGTT+GGG + Chr1:99569184-99569203 MsG0180006061.01.T01:CDS 50.0%
CAGGAAAAATGGCAGGTACC+AGG + Chr1:99565470-99565489 MsG0180006061.01.T01:CDS 50.0%
CAGGGCTACCCTTCAAATTC+AGG + Chr1:99565530-99565549 MsG0180006061.01.T01:CDS 50.0%
CATCCTGGGAATGAATACCC+TGG - Chr1:99565491-99565510 None:intergenic 50.0%
CTATAGTACCCTACCCATGG+GGG + Chr1:99566358-99566377 MsG0180006061.01.T01:intron 50.0%
CTGAATTTGAAGGGTAGCCC+TGG - Chr1:99565532-99565551 None:intergenic 50.0%
CTGTTGGAGCATAGATAGCG+AGG + Chr1:99568619-99568638 MsG0180006061.01.T01:intron 50.0%
CTTGTGAAATGGGAATGGGC+AGG - Chr1:99567293-99567312 None:intergenic 50.0%
GACCCAACTGCTGCAATTTG+CGG - Chr1:99569189-99569208 None:intergenic 50.0%
GAGTTGTCCATGCGTGAACA+CGG - Chr1:99565650-99565669 None:intergenic 50.0%
GCACGGGTCACTATACTAGT+TGG + Chr1:99567157-99567176 MsG0180006061.01.T01:intron 50.0%
GCTAAGCAGAGGTTCACCAA+TGG - Chr1:99567219-99567238 None:intergenic 50.0%
GGCATTCCAAGCAACAGAAG+AGG + Chr1:99569125-99569144 MsG0180006061.01.T01:CDS 50.0%
GGCCCTTATGGAACCTTTGT+TGG + Chr1:99568278-99568297 MsG0180006061.01.T01:CDS 50.0%
GTACACCTAGGGATGGCAAT+GGG - Chr1:99566386-99566405 None:intergenic 50.0%
TACAAACGCGGGTATGGAGA+TGG + Chr1:99566332-99566351 MsG0180006061.01.T01:intron 50.0%
TCACCGCAAATTGCAGCAGT+TGG + Chr1:99569183-99569202 MsG0180006061.01.T01:CDS 50.0%
TCAGGGAATTGCAAGGAGGA+TGG + Chr1:99570420-99570439 MsG0180006061.01.T01:intron 50.0%
TGAGGCGTAGGGATGACAAT+TGG + Chr1:99565884-99565903 MsG0180006061.01.T01:intron 50.0%
TTGATAAACCGCGACGTCTC+AGG - Chr1:99568326-99568345 None:intergenic 50.0%
TTGGTGAACCTCTGCTTAGC+TGG + Chr1:99567219-99567238 MsG0180006061.01.T01:intron 50.0%
TTTATTCCCCGTGCTTGGCA+CGG + Chr1:99567140-99567159 MsG0180006061.01.T01:intron 50.0%
! CTTAGATGCCCAGAGGGTAT+GGG + Chr1:99566254-99566273 MsG0180006061.01.T01:intron 50.0%
! GTACCAGGGTATTCATTCCC+AGG + Chr1:99565485-99565504 MsG0180006061.01.T01:CDS 50.0%
! GTTGGGTCTTGCTGTCTTGT+TGG + Chr1:99569201-99569220 MsG0180006061.01.T01:CDS 50.0%
! TATATGTGGGTTGCGGGACT+GGG - Chr1:99566046-99566065 None:intergenic 50.0%
! TGGTGATTCCAGGGCTGTTT+TGG + Chr1:99569260-99569279 MsG0180006061.01.T01:CDS 50.0%
! TTAGATGCCCAGAGGGTATG+GGG + Chr1:99566255-99566274 MsG0180006061.01.T01:intron 50.0%
!! AAGTATCGGTCATGCTTGGG+TGG + Chr1:99570073-99570092 MsG0180006061.01.T01:intron 50.0%
!! GGGTTTTATCCTACCCGTTG+TGG - Chr1:99565942-99565961 None:intergenic 50.0%
!! GGTCAAAGATTGGTCTAGCC+AGG + Chr1:99568859-99568878 MsG0180006061.01.T01:intron 50.0%
!! GGTGATTCCAGGGCTGTTTT+GGG + Chr1:99569261-99569280 MsG0180006061.01.T01:CDS 50.0%
!! GTTGGCGTCTATGATGGACA+TGG + Chr1:99568296-99568315 MsG0180006061.01.T01:CDS 50.0%
!!! CTGGCTCCAACCGCTTTTTA+TGG + Chr1:99567238-99567257 MsG0180006061.01.T01:intron 50.0%
AAACCCCGCTTTCATGGGTC+TGG + Chr1:99565956-99565975 MsG0180006061.01.T01:CDS 55.0%
AACCCCGCTTTCATGGGTCT+GGG + Chr1:99565957-99565976 MsG0180006061.01.T01:CDS 55.0%
AATGGGTACCCCCATGGGTA+GGG - Chr1:99566369-99566388 None:intergenic 55.0%
ACAATTGGACCCAGTCCCGA+TGG + Chr1:99565899-99565918 MsG0180006061.01.T01:CDS 55.0%
ATACCCTTCCCCATACCCTC+TGG - Chr1:99566266-99566285 None:intergenic 55.0%
ATAGTGACCCGTGCCAAGCA+CGG - Chr1:99567151-99567170 None:intergenic 55.0%
ATGGCAATGGGTACCCCCAT+GGG - Chr1:99566374-99566393 None:intergenic 55.0%
ATGGCCACTTAGATGCCCAG+AGG + Chr1:99566247-99566266 MsG0180006061.01.T01:intron 55.0%
CAATTGGACCCAGTCCCGAT+GGG + Chr1:99565900-99565919 MsG0180006061.01.T01:CDS 55.0%
CAGGCAAGGAAGAAGGAGTG+AGG - Chr1:99567274-99567293 None:intergenic 55.0%
CCAGAGCGAGTGGTTCACAA+CGG + Chr1:99565280-99565299 MsG0180006061.01.T01:intron 55.0%
CGGCTGAGGAAGTCGAAACT+TGG - Chr1:99569766-99569785 None:intergenic 55.0%
GAAATGGGAATGGGCAGGCA+AGG - Chr1:99567288-99567307 None:intergenic 55.0%
GAATGGGCAGGCAAGGAAGA+AGG - Chr1:99567281-99567300 None:intergenic 55.0%
GAATGTGGTGTGGAGCCCAT+TGG + Chr1:99567200-99567219 MsG0180006061.01.T01:intron 55.0%
GACTCAGGGCAGCACATATG+TGG + Chr1:99568167-99568186 MsG0180006061.01.T01:CDS 55.0%
GACTTCCTCAGCCGTTCAAG+AGG + Chr1:99569772-99569791 MsG0180006061.01.T01:CDS 55.0%
GCACGGGTATCATACTAGGG+GGG + Chr1:99565125-99565144 MsG0180006061.01.T01:intron 55.0%
GGAAATGTCGCCGAACTCCA+CGG - Chr1:99570513-99570532 None:intergenic 55.0%
GGGGGGAAAAACTTAGCACG+GGG + Chr1:99565142-99565161 MsG0180006061.01.T01:intron 55.0%
TACCCTTCCCCATACCCTCT+GGG - Chr1:99566265-99566284 None:intergenic 55.0%
TGGCCACTTAGATGCCCAGA+GGG + Chr1:99566248-99566267 MsG0180006061.01.T01:intron 55.0%
TTATTCCCCGTGCTTGGCAC+GGG + Chr1:99567141-99567160 MsG0180006061.01.T01:intron 55.0%
TTTGAAGGCCTGCTTTCGGC+CGG + Chr1:99568076-99568095 MsG0180006061.01.T01:CDS 55.0%
! ATTGGCCTCTTGAACGGCTG+AGG - Chr1:99569780-99569799 None:intergenic 55.0%
! GCAAGCACTGTGAAGTTCCC+TGG + Chr1:99570586-99570605 MsG0180006061.01.T01:CDS 55.0%
! GTATATGTGGGTTGCGGGAC+TGG - Chr1:99566047-99566066 None:intergenic 55.0%
!! GGCGTCTATGATGGACATGG+AGG + Chr1:99568299-99568318 MsG0180006061.01.T01:CDS 55.0%
!! TGTCACTGGTTTCGCAGCTG+TGG + Chr1:99569154-99569173 MsG0180006061.01.T01:CDS 55.0%
AATGGGTACGGGCACGGGTA+AGG + Chr1:99566009-99566028 MsG0180006061.01.T01:intron 60.0%
ACCCGAACTCGTACCCTCGT+GGG - Chr1:99566300-99566319 None:intergenic 60.0%
ATGGAGGTCCTGAGACGTCG+CGG + Chr1:99568315-99568334 MsG0180006061.01.T01:CDS 60.0%
ATGGGTACGGGCACGGGTAA+GGG + Chr1:99566010-99566029 MsG0180006061.01.T01:intron 60.0%
CAATGGGTACCCCCATGGGT+AGG - Chr1:99566370-99566389 None:intergenic 60.0%
CCATGCGTGAACACGGCCTT+AGG - Chr1:99565643-99565662 None:intergenic 60.0%
CCGTTGTGAACCACTCGCTC+TGG - Chr1:99565283-99565302 None:intergenic 60.0%
CCTAAGGCCGTGTTCACGCA+TGG + Chr1:99565640-99565659 MsG0180006061.01.T01:CDS 60.0%
CGCACAACGTCAGATGCTGG+AGG + Chr1:99568116-99568135 MsG0180006061.01.T01:CDS 60.0%
CGCGCATATCCATCCGAACC+CGG - Chr1:99568098-99568117 None:intergenic 60.0%
CGTGCCCAGACCCATGAAAG+CGG - Chr1:99565964-99565983 None:intergenic 60.0%
GATGGCAATGGGTACCCCCA+TGG - Chr1:99566375-99566394 None:intergenic 60.0%
GGGTACCCATTGCCATCCCT+AGG + Chr1:99566378-99566397 MsG0180006061.01.T01:intron 60.0%
GGTTGGAGCCAGCTAAGCAG+AGG - Chr1:99567230-99567249 None:intergenic 60.0%
GTGCCCAGACCCATGAAAGC+GGG - Chr1:99565963-99565982 None:intergenic 60.0%
TACCCGAACTCGTACCCTCG+TGG - Chr1:99566301-99566320 None:intergenic 60.0%
TAGTGACCCGTGCCAAGCAC+GGG - Chr1:99567150-99567169 None:intergenic 60.0%
TGCCCAGACCCATGAAAGCG+GGG - Chr1:99565962-99565981 None:intergenic 60.0%
TTGAAGGCCTGCTTTCGGCC+GGG + Chr1:99568077-99568096 MsG0180006061.01.T01:CDS 60.0%
! ATGCCCAGAGGGTATGGGGA+AGG + Chr1:99566259-99566278 MsG0180006061.01.T01:CDS 60.0%
! TGCCCACGAGGGTACGAGTT+CGG + Chr1:99566295-99566314 MsG0180006061.01.T01:intron 60.0%
! TGCCCAGAGGGTATGGGGAA+GGG + Chr1:99566260-99566279 MsG0180006061.01.T01:CDS 60.0%
AGTGACCCGTGCCAAGCACG+GGG - Chr1:99567149-99567168 None:intergenic 65.0%
ATCCGAACCCGGCCGAAAGC+AGG - Chr1:99568087-99568106 None:intergenic 65.0%
ATGGGTCTGGGCACGAGTCC+GGG + Chr1:99565969-99565988 MsG0180006061.01.T01:CDS 65.0%
CATGGGTCTGGGCACGAGTC+CGG + Chr1:99565968-99565987 MsG0180006061.01.T01:CDS 65.0%
GCGCGCACAACGTCAGATGC+TGG + Chr1:99568113-99568132 MsG0180006061.01.T01:CDS 65.0%
TGCGGGTACCCATCGGGACT+GGG - Chr1:99565911-99565930 None:intergenic 65.0%
TGCTTTCGGCCGGGTTCGGA+TGG + Chr1:99568086-99568105 MsG0180006061.01.T01:CDS 65.0%
TTGCGGGTACCCATCGGGAC+TGG - Chr1:99565912-99565931 None:intergenic 65.0%
! GCCCACGAGGGTACGAGTTC+GGG + Chr1:99566296-99566315 MsG0180006061.01.T01:intron 65.0%
GGCCTGCTTTCGGCCGGGTT+CGG + Chr1:99568082-99568101 MsG0180006061.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 99564606 99570912 99564606 ID=MsG0180006061.01;Name=MsG0180006061.01
Chr1 mRNA 99564606 99570912 99564606 ID=MsG0180006061.01.T01;Parent=MsG0180006061.01;Name=MsG0180006061.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.42|0.37|0.75|0.71|0.87|8|219|617
Chr1 exon 99564606 99564711 99564606 ID=MsG0180006061.01.T01:exon:9663;Parent=MsG0180006061.01.T01
Chr1 exon 99565362 99565769 99565362 ID=MsG0180006061.01.T01:exon:9664;Parent=MsG0180006061.01.T01
Chr1 exon 99565894 99565990 99565894 ID=MsG0180006061.01.T01:exon:9665;Parent=MsG0180006061.01.T01
Chr1 exon 99566259 99566305 99566259 ID=MsG0180006061.01.T01:exon:9666;Parent=MsG0180006061.01.T01
Chr1 exon 99568051 99568371 99568051 ID=MsG0180006061.01.T01:exon:9667;Parent=MsG0180006061.01.T01
Chr1 exon 99569079 99569446 99569079 ID=MsG0180006061.01.T01:exon:9668;Parent=MsG0180006061.01.T01
Chr1 exon 99569699 99569935 99569699 ID=MsG0180006061.01.T01:exon:9669;Parent=MsG0180006061.01.T01
Chr1 exon 99570424 99570912 99570424 ID=MsG0180006061.01.T01:exon:9670;Parent=MsG0180006061.01.T01
Chr1 CDS 99564606 99564711 99564606 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99565362 99565769 99565362 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99565894 99565990 99565894 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99566259 99566305 99566259 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99568051 99568371 99568051 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99569079 99569446 99569079 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99569699 99569935 99569699 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 CDS 99570424 99570693 99570424 ID=MsG0180006061.01.T01:cds;Parent=MsG0180006061.01.T01
Chr1 three_prime_UTR 99570694 99570912 99570694 ID=MsG0180006061.01.T01:three_prime_utr;Parent=MsG0180006061.01.T01
Gene Sequence

>MsG0180006061.01.T01

ATGAGTTTGGGGGCATATATTGTATTAGCAGAGCACGAAGAAATTGTAAAGTTTGGAAAATGGTTACTTTCAATTAAAGGCGGTGACAACAATGCAAATGAAAATGGATGTCCAGTTATGCTGATGAGAAACATCGATCAGGCCAATGTATTGTGTAATGGTAAGCTGACAGTTACACATCTAGGGAAGAGCACGATAGTTGCTACCGTAATTACAGGAAAAATGGCAGGTACCAGGGTATTCATTCCCAGGATGAATCTTATTTTGAGTGATCCAGGGCTACCCTTCAAATTCAGGCGCATGCAATTTTCATTGACTCTTTGTTTTACAATGACAATAAATAAAAGTCAGGGTCAATCTTCATCTCGATTGGGAGTTTATCTTCCTAAGGCCGTGTTCACGCATGGACAACTCTATGTCGTTGTCTCTCGAGTTACTTCTAGAAAAGGTTTGAAGCTGCTTATCTTGGATGAAAATAATAATGTTTGCAAGGAGACCACAAATGTTGTGTATCGGATGACAATTGGACCCAGTCCCGATGGGTACCCGCAAAAAATACCCACAACGGGTAGGATAAAACCCCGCTTTCATGGGTCTGGGCACGAGTCCGGATGCCCAGAGGGTATGGGGAAGGGTATTAAAGTTGTTGCCCACGAGGGTATGTTATCGGAGTTAGTGAACTTTTTGAAGGCCTGCTTTCGGCCGGGTTCGGATGGATATGCGCGCACAACGTCAGATGCTGGAGGTAAACAAGATGGACTATTATGGTATAAAGACTCAGGGCAGCACATATGTGGTGATTTTTCGATGGCTGTAGTTCAAGCCAATAACTTGCTGGAAGATCAGAGCCAGATTGAATCTGGTAGTTTGAGTTTGAATGAGTCTGGCCCTTATGGAACCTTTGTTGGCGTCTATGATGGACATGGAGGTCCTGAGACGTCGCGGTTTATCAACAATCACCTATTTCAACATCTTAAGAGATTTACTTCTGAGCAACAATCTATGTCAGTTGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAGGGGTTTATGTCACTGGTTTCGCAGCTGTGGCCAATTTCACCGCAAATTGCAGCAGTTGGGTCTTGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCAAATCTTGGTGATTCCAGGGCTGTTTTGGGAAGATTAGTTAAAGCAACTGGTGAGGTTTTAGCCATGCAATTATCAACAGAGCACAATGCATCAATAGAGTCTATAAGACAGGAGCTTCATTCTATGCACCCTGATGATTCAAATATTGTTGTTTTAAAGCATAATGTTTGGCGTGTGAAGGGAATTATTCAAATTTCTAGATGCATTGGCGATGTATATTTGAAAAAAGCCGAGTTCAATAGAGAACCATTATATGCCAAGTTTCGACTTCCTCAGCCGTTCAAGAGGCCAATACTGAGCTCAGAACCATCAATACTAGTGCATCAGTTGCAGCCTCAAGATCAATTTATTATATTTGCATCTGATGGGCTCTGGGAGCACTTCAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAATCCTCGCGCTGGAATTGCAAGGAGGATGGTGAAAACTGCGCTTAAAGCAGCAGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAATAAAATTGACCGTGGAGTTCGGCGACATTTCCATGATGATATCACTGTAATTGTTGTGTTTCTTGACTCAAATCTTATGAGTAGAGCAAGCACTGTGAAGTTCCCTGGTATTTCTGTTAGAGGAGGTGGTGTTAGCATCCCTCACAACACATTGGCACCTTTTACTACTACAACAGATAATGATGGTACTTGA

Protein sequence

>MsG0180006061.01.T01

MSLGAYIVLAEHEEIVKFGKWLLSIKGGDNNANENGCPVMLMRNIDQANVLCNGKLTVTHLGKSTIVATVITGKMAGTRVFIPRMNLILSDPGLPFKFRRMQFSLTLCFTMTINKSQGQSSSRLGVYLPKAVFTHGQLYVVVSRVTSRKGLKLLILDENNNVCKETTNVVYRMTIGPSPDGYPQKIPTTGRIKPRFHGSGHESGCPEGMGKGIKVVAHEGMLSELVNFLKACFRPGSDGYARTTSDAGGKQDGLLWYKDSGQHICGDFSMAVVQANNLLEDQSQIESGSLSLNESGPYGTFVGVYDGHGGPETSRFINNHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGFMSLVSQLWPISPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRLVKATGEVLAMQLSTEHNASIESIRQELHSMHPDDSNIVVLKHNVWRVKGIIQISRCIGDVYLKKAEFNREPLYAKFRLPQPFKRPILSSEPSILVHQLQPQDQFIIFASDGLWEHFSNQEAVDIVQNNPRAGIARRMVKTALKAAAKKREMRYSDLNKIDRGVRRHFHDDITVIVVFLDSNLMSRASTVKFPGISVRGGGVSIPHNTLAPFTTTTDNDGT*