AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046843.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046843.01.T01 MTR_4g115880 98.316 594 10 0 1 594 1 594 0.0 1222
MsG0880046843.01.T01 MTR_1g014260 48.997 598 212 14 10 589 11 533 0.0 535
MsG0880046843.01.T01 MTR_4g130940 30.457 394 184 14 192 580 87 395 9.24e-39 152
MsG0880046843.01.T01 MTR_4g130940 30.457 394 184 14 192 580 87 395 1.20e-38 152
MsG0880046843.01.T01 MTR_6g022290 29.306 389 180 15 198 581 30 328 8.93e-38 147
MsG0880046843.01.T01 MTR_6g022310 26.638 473 244 16 124 585 50 430 2.93e-37 147
MsG0880046843.01.T01 MTR_5g030360 26.221 389 189 12 198 581 155 450 8.69e-34 137
MsG0880046843.01.T01 MTR_3g100480 26.343 391 193 11 198 580 585 888 9.30e-34 138
MsG0880046843.01.T01 MTR_6g022300 27.390 387 190 11 198 581 68 366 3.48e-32 132
MsG0880046843.01.T01 MTR_8g090190 26.744 430 187 14 192 578 16 360 4.25e-32 127
MsG0880046843.01.T01 MTR_3g087140 27.419 434 181 15 191 578 15 360 1.99e-31 125
MsG0880046843.01.T01 MTR_5g066000 26.020 392 192 13 198 580 543 845 2.92e-31 130
MsG0880046843.01.T01 MTR_3g100480 26.000 400 213 13 198 580 585 918 1.23e-30 128
MsG0880046843.01.T01 MTR_8g067060 25.648 386 194 12 198 581 204 498 7.22e-30 124
MsG0880046843.01.T01 MTR_8g471100 25.648 386 194 12 198 581 213 507 9.24e-30 124
MsG0880046843.01.T01 MTR_5g032380 24.806 387 202 9 198 580 425 726 5.50e-29 123
MsG0880046843.01.T01 MTR_5g430360 26.154 325 171 11 262 581 22 282 1.61e-28 120
MsG0880046843.01.T01 MTR_2g071620 25.441 397 199 12 192 580 462 769 4.91e-28 120
MsG0880046843.01.T01 MTR_2g070390 25.840 387 198 10 198 578 23 326 7.15e-28 119
MsG0880046843.01.T01 MTR_1g014680 25.879 398 197 14 190 578 176 484 7.27e-26 113
MsG0880046843.01.T01 MTR_8g064910 25.758 396 187 16 198 581 55 355 3.31e-20 94.0
MsG0880046843.01.T01 MTR_7g088760 28.144 167 95 4 415 578 771 915 6.85e-19 91.7
MsG0880046843.01.T01 MTR_7g088760 28.144 167 95 4 415 578 754 898 7.20e-19 91.3
MsG0880046843.01.T01 MTR_1g077980 31.737 167 88 5 415 578 765 908 2.23e-18 89.7
MsG0880046843.01.T01 MTR_1g077980 30.622 209 96 5 195 382 318 498 1.77e-17 87.0
MsG0880046843.01.T01 MTR_1g041240 23.747 379 189 12 195 566 198 483 2.94e-18 89.7
MsG0880046843.01.T01 MTR_1g041240 23.747 379 189 12 195 566 199 484 2.97e-18 89.7
MsG0880046843.01.T01 MTR_1g041240 23.747 379 189 12 195 566 197 482 3.26e-18 89.4
MsG0880046843.01.T01 MTR_7g106570 29.665 209 98 4 195 382 285 465 8.03e-17 84.7
MsG0880046843.01.T01 MTR_7g106570 26.667 180 108 5 415 592 742 899 3.49e-14 76.3
MsG0880046843.01.T01 MTR_0279s0020 21.964 387 200 12 198 581 6 293 1.62e-16 81.6
MsG0880046843.01.T01 MTR_5g086700 23.077 377 190 12 195 564 202 485 1.94e-16 84.0
MsG0880046843.01.T01 MTR_5g086700 23.077 377 190 12 195 564 202 485 2.11e-16 83.6
MsG0880046843.01.T01 MTR_2g087710 26.506 166 97 4 415 578 717 859 9.33e-16 81.6
MsG0880046843.01.T01 MTR_2g087710 27.826 230 115 6 195 403 269 468 1.73e-14 77.4
MsG0880046843.01.T01 MTR_3g079840 23.280 378 188 13 195 564 198 481 1.21e-15 81.3
MsG0880046843.01.T01 MTR_3g079840 23.280 378 188 13 195 564 197 480 1.34e-15 81.3
MsG0880046843.01.T01 MTR_0279s0020 21.671 383 198 12 202 581 1 284 7.21e-15 75.9
MsG0880046843.01.T01 MTR_4g111860 23.274 391 206 14 198 581 88 391 1.37e-14 76.6
MsG0880046843.01.T01 MTR_3g083600 25.926 162 86 3 431 578 926 1067 1.60e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046843.01.T01 AT5G10790 46.980 596 248 14 1 587 1 537 1.10e-166 486
MsG0880046843.01.T01 AT5G10790 54.637 399 145 5 192 587 43 408 1.89e-138 409
MsG0880046843.01.T01 AT5G57990 29.009 424 195 15 168 580 81 409 6.58e-39 153
MsG0880046843.01.T01 AT4G17895 26.972 393 185 12 198 581 177 476 1.52e-33 136
MsG0880046843.01.T01 AT4G24560 26.478 389 195 9 198 580 543 846 2.54e-33 136
MsG0880046843.01.T01 AT3G14400 27.506 389 193 10 198 578 25 332 5.83e-32 131
MsG0880046843.01.T01 AT4G39910 25.866 433 191 13 192 578 16 364 1.81e-31 126
MsG0880046843.01.T01 AT2G22310 26.634 413 186 13 192 573 16 342 1.86e-31 126
MsG0880046843.01.T01 AT5G65450 26.873 387 195 11 198 580 349 651 8.85e-29 122
MsG0880046843.01.T01 AT5G65450 26.873 387 195 11 198 580 330 632 1.11e-28 122
MsG0880046843.01.T01 AT2G24640 26.582 395 184 15 198 578 5 307 1.16e-27 117
MsG0880046843.01.T01 AT5G46740 27.750 400 190 15 193 581 158 469 2.28e-27 117
MsG0880046843.01.T01 AT4G31670 24.422 389 200 12 198 578 169 471 2.85e-27 117
MsG0880046843.01.T01 AT2G24640 26.582 395 184 15 198 578 175 477 3.13e-27 117
MsG0880046843.01.T01 AT1G17110 24.490 392 202 12 197 580 442 747 1.31e-25 112
MsG0880046843.01.T01 AT1G17110 24.490 392 202 12 197 580 438 743 1.32e-25 112
MsG0880046843.01.T01 AT1G17110 24.490 392 202 12 197 580 438 743 1.32e-25 112
MsG0880046843.01.T01 AT5G46740 29.710 276 132 9 313 581 40 260 7.74e-25 108
MsG0880046843.01.T01 AT2G22310 26.087 345 167 10 258 573 25 310 4.73e-24 103
MsG0880046843.01.T01 AT2G22310 26.087 345 167 10 258 573 20 305 4.75e-24 103
MsG0880046843.01.T01 AT2G40930 27.358 212 127 6 375 581 727 916 1.27e-20 97.1
MsG0880046843.01.T01 AT2G40930 26.837 313 156 9 195 476 315 585 8.70e-17 84.7
MsG0880046843.01.T01 AT2G40930 27.358 212 127 6 375 581 727 916 1.27e-20 97.1
MsG0880046843.01.T01 AT2G40930 26.837 313 156 9 195 476 315 585 8.70e-17 84.7
MsG0880046843.01.T01 AT4G10590 32.934 167 86 4 415 578 748 891 1.70e-19 93.6
MsG0880046843.01.T01 AT4G10590 31.100 209 95 6 195 382 301 481 2.36e-17 86.7
MsG0880046843.01.T01 AT4G10590 32.934 167 86 4 415 578 748 891 1.70e-19 93.6
MsG0880046843.01.T01 AT4G10590 31.100 209 95 6 195 382 301 481 2.36e-17 86.7
MsG0880046843.01.T01 AT4G10590 32.934 167 86 4 415 578 748 891 1.70e-19 93.6
MsG0880046843.01.T01 AT4G10590 31.100 209 95 6 195 382 301 481 2.36e-17 86.7
MsG0880046843.01.T01 AT4G10590 32.934 167 86 4 415 578 748 891 1.70e-19 93.6
MsG0880046843.01.T01 AT4G10590 31.100 209 95 6 195 382 301 481 2.36e-17 86.7
MsG0880046843.01.T01 AT4G10570 32.934 167 86 4 415 578 749 892 5.23e-19 92.0
MsG0880046843.01.T01 AT4G10570 30.622 209 96 5 195 382 302 482 6.53e-17 85.1
MsG0880046843.01.T01 AT1G32850 30.476 210 97 4 194 382 298 479 6.30e-19 91.7
MsG0880046843.01.T01 AT1G32850 30.508 177 96 5 405 578 725 877 1.25e-15 81.3
MsG0880046843.01.T01 AT5G22030 27.711 166 96 4 415 578 723 866 9.72e-18 87.8
MsG0880046843.01.T01 AT5G22030 27.711 166 96 4 415 578 765 908 1.13e-17 87.8
MsG0880046843.01.T01 AT5G06600 22.539 386 195 14 195 572 196 485 6.01e-15 79.0
MsG0880046843.01.T01 AT5G06600 22.539 386 195 14 195 572 197 486 6.06e-15 79.0
MsG0880046843.01.T01 AT5G06600 22.539 386 195 14 195 572 197 486 7.58e-15 78.6
MsG0880046843.01.T01 AT3G11910 22.251 382 201 14 195 572 195 484 9.01e-15 78.6
MsG0880046843.01.T01 AT3G11910 22.251 382 201 14 195 572 195 484 9.01e-15 78.6
MsG0880046843.01.T01 AT3G11910 22.251 382 201 14 195 572 196 485 9.33e-15 78.6
MsG0880046843.01.T01 AT3G11910 22.251 382 201 14 195 572 196 485 9.33e-15 78.6
MsG0880046843.01.T01 AT1G04860 28.571 147 75 4 442 578 828 954 5.64e-11 66.2

Find 208 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTAGGCACTCCAACTTTC+TGG 0.152570 8:-78998503 MsG0880046843.01.T01:three_prime_UTR
TGAAATCTGACCGTTGATTT+TGG 0.232505 8:+79002693 None:intergenic
TGATTTCCCGCGGGGATTGC+GGG 0.236194 8:-79002131 MsG0880046843.01.T01:CDS
GCGGAGGGAGGCGCGGCCGC+CGG 0.262389 8:+79002582 None:intergenic
ATTTACAAGAGCAGAGAAAT+TGG 0.276376 8:-78999242 MsG0880046843.01.T01:CDS
AAGTTAGATTTCAAGGTCTT+TGG 0.281816 8:+79002767 None:intergenic
CGGAGGGAGGCGCGGCCGCC+GGG 0.289815 8:+79002583 None:intergenic
TTTCATGAATTCGGTGTTGC+AGG 0.290893 8:-79002083 MsG0880046843.01.T01:CDS
GACATTAAATGCCAATGATT+TGG 0.291008 8:+78998705 None:intergenic
CGCAATCCCCGCGGGAAATC+AGG 0.307100 8:+79002133 None:intergenic
CAAGAACTTTGCTGGGCTAT+AGG 0.310468 8:+79001835 None:intergenic
AAACACTTGTTTCATGAATT+CGG 0.335765 8:-79002092 MsG0880046843.01.T01:CDS
GCGATTGTTGTATTGCTCAT+AGG 0.342061 8:-78999480 MsG0880046843.01.T01:CDS
CTTTGGGATATCTACCTTGA+TGG 0.355939 8:-78999278 MsG0880046843.01.T01:CDS
CTGCTGCGTTTGCCGTGATC+AGG 0.363132 8:-79002365 MsG0880046843.01.T01:CDS
CTATAAAGCAACTGATAAAT+CGG 0.367733 8:-78998756 MsG0880046843.01.T01:CDS
ATTATGCTTAGCTTGTGATA+TGG 0.369132 8:-79001897 MsG0880046843.01.T01:CDS
CACCTGTACAAGAACTTTGC+TGG 0.372135 8:+79001827 None:intergenic
ATCTCTCATCCTCAATCTTA+AGG 0.377114 8:-78999030 MsG0880046843.01.T01:CDS
AACAAGGGGAAGCTTCCTTA+TGG 0.382446 8:+78999156 None:intergenic
TTTACAAGAGCAGAGAAATT+GGG 0.384632 8:-78999241 MsG0880046843.01.T01:CDS
GGTACAAGTGTGATGATTCT+TGG 0.387459 8:-78998853 MsG0880046843.01.T01:CDS
GTTTGATCCGGAGGCAGTTA+TGG 0.388383 8:+79002608 None:intergenic
AGGTAGATATCCCAAAGTTT+TGG 0.392594 8:+78999284 None:intergenic
ATAGCTTGCAAGGTTGGACT+TGG 0.397326 8:+79001541 None:intergenic
CCGATTCCAGCCAAAACTTT+GGG 0.398387 8:-78999294 MsG0880046843.01.T01:CDS
AAACATTGTGAGGGCTGCTC+AGG 0.399967 8:-78998813 MsG0880046843.01.T01:CDS
ATCTACCTTGATGGGGTGCT+TGG 0.401605 8:-78999269 MsG0880046843.01.T01:CDS
CTGATTTCCCGCGGGGATTG+CGG 0.404798 8:-79002132 MsG0880046843.01.T01:CDS
GCCGATTCCAGCCAAAACTT+TGG 0.412364 8:-78999295 MsG0880046843.01.T01:CDS
AAGAACTTTGCTGGGCTATA+GGG 0.417867 8:+79001836 None:intergenic
CATAGATCATTTGAAGCATC+AGG 0.419831 8:+78998965 None:intergenic
AGAAGTCATGGCATATCGTT+AGG 0.424302 8:+78998661 None:intergenic
TATGGATTCCTTATAATTTG+TGG 0.426265 8:-78998469 MsG0880046843.01.T01:three_prime_UTR
GCGGTCAGATGTTATGTGTA+TGG 0.427526 8:-78999440 MsG0880046843.01.T01:CDS
CCCTCAAGTTTCCAGAAAGT+TGG 0.428158 8:+78998492 None:intergenic
TTTCTGGAAACTTGAGGGTA+TGG 0.431385 8:-78998487 MsG0880046843.01.T01:three_prime_UTR
GATAGTAAAGTTAGATTTCA+AGG 0.439060 8:+79002760 None:intergenic
GCGAAAGAGGTGGGATGGGA+TGG 0.439510 8:-79002917 MsG0880046843.01.T01:five_prime_UTR
TCCTGAGTGATAAGCATAAT+CGG 0.439582 8:-79002027 MsG0880046843.01.T01:CDS
CGCCGCTTTCTGAGATTCTC+CGG 0.444030 8:+79002235 None:intergenic
ATAGCAACTGCGAAAAGAAA+TGG 0.452606 8:-79001947 MsG0880046843.01.T01:CDS
CCTTGCAAGCTATGAACAAC+AGG 0.455682 8:-79001531 MsG0880046843.01.T01:CDS
CTCTCAAGCAGATGTCCATA+AGG 0.460815 8:-78999171 MsG0880046843.01.T01:CDS
AGATTCAGAGTGGGAGGGAA+TGG 0.462664 8:+79002809 None:intergenic
CAGGTGATGGTCCAAATCAT+TGG 0.464643 8:-78998716 MsG0880046843.01.T01:three_prime_UTR
TTGTTCATAGCTTGCAAGGT+TGG 0.469502 8:+79001535 None:intergenic
GCCAAGTGGGGACATGGTTG+TGG 0.470459 8:+79002670 None:intergenic
ATGGAGGGAGAGGAATGGTT+TGG 0.473439 8:+79002627 None:intergenic
GATTTCCCGCGGGGATTGCG+GGG 0.474172 8:-79002130 MsG0880046843.01.T01:CDS
ATCATTGGCATTTAATGTCA+TGG 0.475216 8:-78998701 MsG0880046843.01.T01:three_prime_UTR
GGCCGCCGGGAGGTTTGATC+CGG 0.477725 8:+79002596 None:intergenic
TATGTCATCTACTCCGCATC+CGG 0.477988 8:-79002254 MsG0880046843.01.T01:CDS
CGATTGTTGTATTGCTCATA+GGG 0.478514 8:-78999479 MsG0880046843.01.T01:CDS
GGTGACATGTCCAGTGAGAA+TGG 0.480165 8:+78999055 None:intergenic
CAGACCGTTGCGTCCACAAT+CGG 0.485001 8:-79002304 MsG0880046843.01.T01:CDS
TTTGGGATATCTACCTTGAT+GGG 0.487341 8:-78999277 MsG0880046843.01.T01:CDS
CCAACTTTCTGGAAACTTGA+GGG 0.489263 8:-78998492 MsG0880046843.01.T01:three_prime_UTR
GGGCTGCGCTTCACTCAATA+TGG 0.489978 8:+79002860 None:intergenic
CTTGACTTGGAACCAAATCA+AGG 0.491810 8:-78999370 MsG0880046843.01.T01:CDS
TACAGCGGCGCATGAGATGC+AGG 0.492370 8:+79002495 None:intergenic
CGTAGACATCTCACTTGACT+TGG 0.493660 8:-78999383 MsG0880046843.01.T01:CDS
TCAATCTTAAGGAGTCGGTT+TGG 0.493910 8:-78999019 MsG0880046843.01.T01:CDS
GATCACGGCGGAGGGAGGCG+CGG 0.494606 8:+79002575 None:intergenic
TTCAGAGTGGGAGGGAATGG+AGG 0.494827 8:+79002812 None:intergenic
TTTGCAGTTCCCATTCTCAC+TGG 0.494834 8:-78999065 MsG0880046843.01.T01:CDS
GGCAGAATCATCACCATTTG+CGG 0.495711 8:+79001970 None:intergenic
ATGGAGCGAAAGAGGTGGGA+TGG 0.497361 8:-79002922 MsG0880046843.01.T01:five_prime_UTR
AAAGCATCAAAGAGGGGAGG+AGG 0.498976 8:+78998409 None:intergenic
GAGAGTTAATACTTTCATGT+TGG 0.499971 8:-78998549 MsG0880046843.01.T01:three_prime_UTR
CTCATGATTGGCACAGGTGA+TGG 0.503720 8:-78998729 MsG0880046843.01.T01:exon
AGAGCGCGTTCGCGTAGATC+CGG 0.505738 8:+79002187 None:intergenic
TAAATCGGTTGCCTCATGAT+TGG 0.507887 8:-78998741 MsG0880046843.01.T01:exon
CTCACCATTGCAAGAAGGAT+TGG 0.509379 8:+78999318 None:intergenic
GAGGGAGAGGAATGGTTTGG+TGG 0.509621 8:+79002630 None:intergenic
TTTCGTGAGGATCACGGCGG+AGG 0.510267 8:+79002566 None:intergenic
GGATGGAAGAGAGTAAAAGT+AGG 0.512354 8:-79002900 MsG0880046843.01.T01:five_prime_UTR
AACTCGGCCAAGTGGGGACA+TGG 0.512760 8:+79002664 None:intergenic
TTGATTGCTTAATCGCAGAT+AGG 0.512911 8:+78998877 None:intergenic
CACTCTGGTAAGTTAGATGC+TGG 0.512954 8:-78998911 MsG0880046843.01.T01:CDS
TCAGGCTCATCCCCATCAAA+AGG 0.513022 8:+78998983 None:intergenic
CCTGTTGTTCATAGCTTGCA+AGG 0.514285 8:+79001531 None:intergenic
CGGTGATTTGATAATGTGAA+TGG 0.515858 8:+79002725 None:intergenic
GTACAAGTGTGATGATTCTT+GGG 0.516165 8:-78998852 MsG0880046843.01.T01:CDS
ACCACAACCATGTCCCCACT+TGG 0.519117 8:-79002671 MsG0880046843.01.T01:CDS
ATTGCTCATAGGGTATTCTC+TGG 0.521986 8:-78999469 MsG0880046843.01.T01:CDS
CAGTTATGGAGGGAGAGGAA+TGG 0.523524 8:+79002622 None:intergenic
TCTCCCTCCATAACTGCCTC+CGG 0.524014 8:-79002615 MsG0880046843.01.T01:CDS
TTTCTGAGATTCTCCGGATG+CGG 0.524348 8:+79002241 None:intergenic
GCCCAGCAAAGTTCTTGTAC+AGG 0.529287 8:-79001829 MsG0880046843.01.T01:intron
CGCCGGGAGGTTTGATCCGG+AGG 0.530528 8:+79002599 None:intergenic
GTGACATGTCCAGTGAGAAT+GGG 0.531399 8:+78999056 None:intergenic
TCAGCAGTGTAAGGTGAAGC+AGG 0.532735 8:-78999197 MsG0880046843.01.T01:CDS
GGTGGAAGAGCGGCGGAACT+CGG 0.533556 8:+79002648 None:intergenic
TCGCGTAGATCCGGAGTTGA+AGG 0.536635 8:+79002196 None:intergenic
AGATTTCAAGGTCTTTGGAT+CGG 0.538069 8:+79002772 None:intergenic
AGGGAGGCGCGGCCGCCGGG+AGG 0.538738 8:+79002586 None:intergenic
TTTGCTGTCGTCACTCACTC+TGG 0.539742 8:-78998926 MsG0880046843.01.T01:CDS
CATCCTCAATCTTAAGGAGT+CGG 0.541711 8:-78999024 MsG0880046843.01.T01:CDS
GCTTCCAATCCTTCTTGCAA+TGG 0.542195 8:-78999322 MsG0880046843.01.T01:CDS
CAACGTTCCTGATTTCCCGC+GGG 0.545113 8:-79002140 MsG0880046843.01.T01:CDS
CTACGCGAACGCGCTCTGAT+CGG 0.545145 8:-79002181 MsG0880046843.01.T01:CDS
TGGAGCGAAAGAGGTGGGAT+GGG 0.546265 8:-79002921 MsG0880046843.01.T01:five_prime_UTR
CGACGTAAGCCACACAATGA+AGG 0.547420 8:-79001449 MsG0880046843.01.T01:intron
GCGGCGGAACTCGGCCAAGT+GGG 0.547829 8:+79002657 None:intergenic
ACCTGTACAAGAACTTTGCT+GGG 0.547919 8:+79001828 None:intergenic
CGCATGAGATGCAGGCATAG+AGG 0.550847 8:+79002503 None:intergenic
AAGCATCAAAGAGGGGAGGA+GGG 0.551004 8:+78998410 None:intergenic
AGCATCAAAGAGGGGAGGAG+GGG 0.551266 8:+78998411 None:intergenic
TCATGTCACTCTTCCACCGC+CGG 0.554123 8:-79002472 MsG0880046843.01.T01:CDS
GGGAAATCAGGAACGTTGAT+CGG 0.554225 8:+79002145 None:intergenic
AATACATTACCTTCATTGTG+TGG 0.554718 8:+79001440 None:intergenic
AAATATGGAGCGAAAGAGGT+GGG 0.554776 8:-79002926 MsG0880046843.01.T01:five_prime_UTR
GGAAGGAGCAGAGAGACCGC+AGG 0.555638 8:+79002528 None:intergenic
GGATTACCGTCCTTCAACTC+CGG 0.556868 8:-79002206 MsG0880046843.01.T01:CDS
TCCAACTTTCTGGAAACTTG+AGG 0.558593 8:-78998493 MsG0880046843.01.T01:three_prime_UTR
AAACCGACTCCTTAAGATTG+AGG 0.558602 8:+78999021 None:intergenic
AATGCTGATGATGCCGCAAA+TGG 0.559230 8:-79001983 MsG0880046843.01.T01:CDS
CAATCCTTCTTGCAATGGTG+AGG 0.559381 8:-78999317 MsG0880046843.01.T01:CDS
AGAATGGGAACTGCAAATAA+CGG 0.566367 8:+78999071 None:intergenic
CAACTAATATCAAGATTCGA+GGG 0.566733 8:+78998438 None:intergenic
ATGAGATGCAGGCATAGAGG+CGG 0.566788 8:+79002506 None:intergenic
GTGAGGATCACGGCGGAGGG+AGG 0.567687 8:+79002570 None:intergenic
CATTGATGCGGCATGTGCGG+CGG 0.567934 8:+79002435 None:intergenic
ACAACTAATATCAAGATTCG+AGG 0.568342 8:+78998437 None:intergenic
GGATGCGGAGTAGATGACAT+AGG 0.568578 8:+79002256 None:intergenic
CGGCTGAGATTCAGAGTGGG+AGG 0.569818 8:+79002803 None:intergenic
ATTTCCCGCGGGGATTGCGG+GGG 0.570254 8:-79002129 MsG0880046843.01.T01:CDS
ATCTGCGATTAAGCAATCAA+TGG 0.571438 8:-78998874 MsG0880046843.01.T01:CDS
ATGTGAATGGATCGAATGGA+TGG 0.571689 8:+79002738 None:intergenic
TGAGATGCAGGCATAGAGGC+GGG 0.572369 8:+79002507 None:intergenic
ACCGATTATGCTTATCACTC+AGG 0.573589 8:+79002026 None:intergenic
TTATATGGAAGCAAGAAACA+AGG 0.575945 8:+78999140 None:intergenic
GGAGGCAGTTATGGAGGGAG+AGG 0.576687 8:+79002617 None:intergenic
TGATCCGGAGGCAGTTATGG+AGG 0.576751 8:+79002611 None:intergenic
TTCGTGAGGATCACGGCGGA+GGG 0.577779 8:+79002567 None:intergenic
GTGAGAAATGACACCGGCGG+TGG 0.578310 8:+79002459 None:intergenic
GGTTGCCTCATGATTGGCAC+AGG 0.580009 8:-78998735 MsG0880046843.01.T01:exon
AAGATTGAGGATGAGAGATA+AGG 0.583138 8:+78999034 None:intergenic
TTACAAGAGCAGAGAAATTG+GGG 0.584043 8:-78999240 MsG0880046843.01.T01:CDS
AGACATTGATGCGGCATGTG+CGG 0.585359 8:+79002432 None:intergenic
TCAACGTTCCTGATTTCCCG+CGG 0.585556 8:-79002141 MsG0880046843.01.T01:CDS
TCTATCCAAGCACCCCATCA+AGG 0.586315 8:+78999264 None:intergenic
GATGCGGAGTAGATGACATA+GGG 0.587068 8:+79002257 None:intergenic
GCAAACGCAGCAGAAAAGCT+CGG 0.588350 8:+79002375 None:intergenic
CATGCCGCATCAATGTCTCC+TGG 0.594546 8:-79002427 MsG0880046843.01.T01:CDS
AACATTGTGAGGGCTGCTCA+GGG 0.594864 8:-78998812 MsG0880046843.01.T01:CDS
GATCCGGAGGCAGTTATGGA+GGG 0.595001 8:+79002612 None:intergenic
TATATGGAAGCAAGAAACAA+GGG 0.595854 8:+78999141 None:intergenic
TTGACTTGGAACCAAATCAA+GGG 0.596094 8:-78999369 MsG0880046843.01.T01:CDS
TCGATTGCGATCTGATGACC+AGG 0.596802 8:+79002409 None:intergenic
GCTTGATGGGATCCATGAAA+AGG 0.596972 8:-79001483 MsG0880046843.01.T01:CDS
GAAGTCATGGCATATCGTTA+GGG 0.598867 8:+78998662 None:intergenic
AAAATATGGAGCGAAAGAGG+TGG 0.600133 8:-79002927 MsG0880046843.01.T01:five_prime_UTR
CGGCGGAACTCGGCCAAGTG+GGG 0.600908 8:+79002658 None:intergenic
ATGCAGGCATAGAGGCGGGA+AGG 0.603348 8:+79002511 None:intergenic
AAAAGAAATGGAGAGAACAA+TGG 0.604176 8:-79001935 MsG0880046843.01.T01:CDS
TGTTTCACACGCCACCGTTG+AGG 0.604532 8:-79002057 MsG0880046843.01.T01:CDS
GAGGAATTTCGTGAGGATCA+CGG 0.607762 8:+79002560 None:intergenic
TCTTTGGATCGGAGAATCAA+CGG 0.609825 8:+79002783 None:intergenic
AGCGGCGGAACTCGGCCAAG+TGG 0.611618 8:+79002656 None:intergenic
GTCGCCGATTGTGGACGCAA+CGG 0.612082 8:+79002300 None:intergenic
GATAATGTGAATGGATCGAA+TGG 0.615478 8:+79002734 None:intergenic
ATCCGGAGAATCTCAGAAAG+CGG 0.616124 8:-79002237 MsG0880046843.01.T01:CDS
TTCAAAGCATCAAAGAGGGG+AGG 0.619344 8:+78998406 None:intergenic
GTTGCGTCCACAATCGGCGA+CGG 0.621132 8:-79002298 MsG0880046843.01.T01:CDS
TGACTTGGAACCAAATCAAG+GGG 0.622070 8:-78999368 MsG0880046843.01.T01:CDS
AGTTGTTGATGTGAAACCAC+AGG 0.622253 8:+78999417 None:intergenic
TTGCTGGGCTATAGGGAAGA+CGG 0.622634 8:+79001843 None:intergenic
TGCCTCCGGATCAAACCTCC+CGG 0.622961 8:-79002601 MsG0880046843.01.T01:CDS
ATTCCTCACTGCAACGCCTG+CGG 0.624299 8:-79002544 MsG0880046843.01.T01:CDS
GATCCATGAAAAGGTGGACA+AGG 0.624629 8:-79001474 MsG0880046843.01.T01:CDS
TCGGCCTCACCATTGCAAGA+AGG 0.626312 8:+78999313 None:intergenic
TCAAGTGAGATGTCTACGCA+CGG 0.626334 8:+78999388 None:intergenic
GTGTATGAATGGAGAAGTCA+TGG 0.626462 8:+78998649 None:intergenic
AAGTTGATGAAAACATTGTG+AGG 0.627661 8:-78998823 MsG0880046843.01.T01:CDS
GATGTTATGTGTATGGCCTG+TGG 0.629984 8:-78999433 MsG0880046843.01.T01:CDS
CACGATCGTAAACCTGATCA+CGG 0.630349 8:+79002353 None:intergenic
CATCACCTGTGCCAATCATG+AGG 0.630458 8:+78998730 None:intergenic
AGACCGCAGGCGTTGCAGTG+AGG 0.634031 8:+79002541 None:intergenic
TTGGGATATCTACCTTGATG+GGG 0.634651 8:-78999276 MsG0880046843.01.T01:CDS
CTCAGGAAGTAATTCCTCAA+CGG 0.634756 8:+79002043 None:intergenic
TCTCAGAAAGCGGCGCCGAG+TGG 0.636018 8:-79002227 MsG0880046843.01.T01:CDS
GGAATGGTTTGGTGGAAGAG+CGG 0.636084 8:+79002638 None:intergenic
GTCATGTCCTCCAAAATCAA+CGG 0.636395 8:-79002703 MsG0880046843.01.T01:CDS
ATATGGAAGCAAGAAACAAG+GGG 0.638379 8:+78999142 None:intergenic
TTGAAGGACGGTAATCCACT+CGG 0.644376 8:+79002212 None:intergenic
GGCTGAGATTCAGAGTGGGA+GGG 0.646527 8:+79002804 None:intergenic
AACGTTCCTGATTTCCCGCG+GGG 0.652139 8:-79002139 MsG0880046843.01.T01:CDS
TGATGGGATCCATGAAAAGG+TGG 0.653101 8:-79001480 MsG0880046843.01.T01:CDS
TTGCAGTGAGGAATTTCGTG+AGG 0.654104 8:+79002553 None:intergenic
CAAGTGAGATGTCTACGCAC+GGG 0.661752 8:+78999389 None:intergenic
ATGGTTTGGTGGAAGAGCGG+CGG 0.661966 8:+79002641 None:intergenic
CAACGGCTGAGATTCAGAGT+GGG 0.664470 8:+79002800 None:intergenic
AACTAATATCAAGATTCGAG+GGG 0.670063 8:+78998439 None:intergenic
GTAGATCCGGAGTTGAAGGA+CGG 0.681063 8:+79002200 None:intergenic
ACTAATATCAAGATTCGAGG+GGG 0.683193 8:+78998440 None:intergenic
GGTCTGTGCGATCACGACTG+CGG 0.684411 8:+79002321 None:intergenic
TCAACGGCTGAGATTCAGAG+TGG 0.692651 8:+79002799 None:intergenic
AGTTGATGAAAACATTGTGA+GGG 0.699031 8:-78998822 MsG0880046843.01.T01:CDS
AGGAAGTAATTCCTCAACGG+TGG 0.706756 8:+79002046 None:intergenic
ATGACCAGGAGACATTGATG+CGG 0.728953 8:+79002423 None:intergenic
GGCGGCGTGAGAAATGACAC+CGG 0.740854 8:+79002453 None:intergenic
GACTTGGAACCAAATCAAGG+GGG 0.743974 8:-78999367 MsG0880046843.01.T01:CDS
GGAAGAGTGACATGATACAG+CGG 0.752026 8:+79002480 None:intergenic
CTCCGGATCAAACCTCCCGG+CGG 0.757304 8:-79002598 MsG0880046843.01.T01:CDS
GGCGTGAGAAATGACACCGG+CGG 0.784348 8:+79002456 None:intergenic
GAATTTCGTGAGGATCACGG+CGG 0.842560 8:+79002563 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATATATAAAAAATA+TGG - Chr8:78998410-78998429 MsG0880046843.01.T01:three_prime_UTR 0.0%
!! AACTAAAAAAATAAAACAAA+AGG + Chr8:79001694-79001713 None:intergenic 10.0%
!! ACTAAAAAAATAAAACAAAA+GGG + Chr8:79001693-79001712 None:intergenic 10.0%
!! AAATACAAAAAATCAAAACA+GGG + Chr8:79000005-79000024 None:intergenic 15.0%
!!! TATTTTTGATCAAATCTTTT+AGG - Chr8:79000252-79000271 MsG0880046843.01.T01:intron 15.0%
!! CAAATACAAAAAATCAAAAC+AGG + Chr8:79000006-79000025 None:intergenic 20.0%
!! CACAAGAAAATTAAAAAACA+AGG - Chr8:79002722-79002741 MsG0880046843.01.T01:exon 20.0%
!! GATATATTTCAGTATCTTTA+AGG + Chr8:79000409-79000428 None:intergenic 20.0%
!! TAATCTAGTATACAATCTAA+AGG + Chr8:79000693-79000712 None:intergenic 20.0%
!! TATTTGTTTCAAAATGAAGT+TGG - Chr8:79001563-79001582 MsG0880046843.01.T01:intron 20.0%
!! TCATCTTAAATAATGGTAAA+TGG - Chr8:79000469-79000488 MsG0880046843.01.T01:intron 20.0%
!! TTATGTTCTTGAAAATCTAA+TGG + Chr8:79000668-79000687 None:intergenic 20.0%
!!! AGTTTTTAGAATTTATTCAC+TGG - Chr8:78999674-78999693 MsG0880046843.01.T01:intron 20.0%
!!! CAACAAAATACTATTTTTCT+AGG - Chr8:79000167-79000186 MsG0880046843.01.T01:intron 20.0%
!!! CTGTTTTGATTTTTTGTATT+TGG - Chr8:79000004-79000023 MsG0880046843.01.T01:intron 20.0%
!!! GTTTTTAGAATTTATTCACT+GGG - Chr8:78999675-78999694 MsG0880046843.01.T01:intron 20.0%
!!! TTAATTTTCTTGTGTATGAA+TGG + Chr8:79002716-79002735 None:intergenic 20.0%
! AAAATTTCAACATACTTCAC+AGG + Chr8:79000099-79000118 None:intergenic 25.0%
! AAACACTTGTTTCATGAATT+CGG - Chr8:78999259-78999278 MsG0880046843.01.T01:CDS 25.0%
! AAACAGTGACACAAATTTAT+TGG - Chr8:78999937-78999956 MsG0880046843.01.T01:intron 25.0%
! AAACCTCAATTTAATACAAC+AGG - Chr8:79001665-79001684 MsG0880046843.01.T01:intron 25.0%
! AAATTTCAACATACTTCACA+GGG + Chr8:79000098-79000117 None:intergenic 25.0%
! AAGAAAAAAAATGTCAAGGA+AGG - Chr8:79002253-79002272 MsG0880046843.01.T01:CDS 25.0%
! AAGGTATGTATGTTTGTATA+GGG + Chr8:79000390-79000409 None:intergenic 25.0%
! CTATAAAGCAACTGATAAAT+CGG - Chr8:79002595-79002614 MsG0880046843.01.T01:CDS 25.0%
! CTTCAAGAAAAAAAATGTCA+AGG - Chr8:79002249-79002268 MsG0880046843.01.T01:CDS 25.0%
! GATAGTAAAGTTAGATTTCA+AGG + Chr8:78998594-78998613 None:intergenic 25.0%
! GGTAAAAACCACAAATTATA+AGG + Chr8:79002893-79002912 None:intergenic 25.0%
! TAAGGTATGTATGTTTGTAT+AGG + Chr8:79000391-79000410 None:intergenic 25.0%
! TAGACATCAAGTCAATTTAT+CGG - Chr8:79001532-79001551 MsG0880046843.01.T01:CDS 25.0%
! TATCATAACATTGAAATGCA+GGG - Chr8:79000877-79000896 MsG0880046843.01.T01:intron 25.0%
! TATCTAAACATGGAAAAAAG+AGG + Chr8:79001102-79001121 None:intergenic 25.0%
! TATGGATTCCTTATAATTTG+TGG - Chr8:79002882-79002901 MsG0880046843.01.T01:five_prime_UTR 25.0%
! TCCTATATGATGAATTGAAT+AGG + Chr8:79001045-79001064 None:intergenic 25.0%
! TTATCATAACATTGAAATGC+AGG - Chr8:79000876-79000895 MsG0880046843.01.T01:intron 25.0%
! TTATTCACTGGGTTTATATT+TGG - Chr8:78999686-78999705 MsG0880046843.01.T01:intron 25.0%
! TTCCTAACTATAAAACCATA+CGG + Chr8:79000589-79000608 None:intergenic 25.0%
! TTTACAATGGTTGCAAAATT+AGG - Chr8:79001619-79001638 MsG0880046843.01.T01:intron 25.0%
!! AAAACTTTTGGCATTTTATG+TGG + Chr8:79001282-79001301 None:intergenic 25.0%
!! AAACTTTTGGCATTTTATGT+GGG + Chr8:79001281-79001300 None:intergenic 25.0%
!! AACAGAATATTTCCTTTTGA+TGG - Chr8:79002356-79002375 MsG0880046843.01.T01:CDS 25.0%
!! AATTTTTGCCTATGAAACAA+GGG + Chr8:79000564-79000583 None:intergenic 25.0%
!! ACAGAATATTTCCTTTTGAT+GGG - Chr8:79002357-79002376 MsG0880046843.01.T01:CDS 25.0%
!! AGTGCTCAAATCTTTTTATA+TGG + Chr8:79002229-79002248 None:intergenic 25.0%
!! GTGTCATTCATCTTAAATAA+TGG - Chr8:79000462-79000481 MsG0880046843.01.T01:intron 25.0%
!! TAATTTTTGCCTATGAAACA+AGG + Chr8:79000565-79000584 None:intergenic 25.0%
!! TTTGAAACTTAAAGAGTAAG+AGG - Chr8:79000613-79000632 MsG0880046843.01.T01:intron 25.0%
!! TTTTCATTTCAATGCTTGAT+GGG - Chr8:78999855-78999874 MsG0880046843.01.T01:intron 25.0%
!! TTTTTCATTTCAATGCTTGA+TGG - Chr8:78999854-78999873 MsG0880046843.01.T01:intron 25.0%
!!! AAGAGTATTCTGAATCATTT+TGG + Chr8:79000843-79000862 None:intergenic 25.0%
!!! AGTTATTTGAGTTGTTGTTA+TGG - Chr8:78999762-78999781 MsG0880046843.01.T01:intron 25.0%
!!! GCAATTGTGTATCATTTTTT+GGG - Chr8:79002773-79002792 MsG0880046843.01.T01:five_prime_UTR 25.0%
!!! GTGTCATTTATCTTCAATAA+TGG + Chr8:79000354-79000373 None:intergenic 25.0%
!!! TGCAATTGTGTATCATTTTT+TGG - Chr8:79002772-79002791 MsG0880046843.01.T01:five_prime_UTR 25.0%
AAAAAAAATGTCAAGGAAGG+TGG - Chr8:79002256-79002275 MsG0880046843.01.T01:CDS 30.0%
AAAACAGGGACAATTATACT+TGG + Chr8:78999991-79000010 None:intergenic 30.0%
AAAAGAAATGGAGAGAACAA+TGG - Chr8:78999416-78999435 MsG0880046843.01.T01:CDS 30.0%
AACTAATATCAAGATTCGAG+GGG + Chr8:79002915-79002934 None:intergenic 30.0%
AAGTTAGATTTCAAGGTCTT+TGG + Chr8:78998587-78998606 None:intergenic 30.0%
AATACATTACCTTCATTGTG+TGG + Chr8:78999914-78999933 None:intergenic 30.0%
ACAACTAATATCAAGATTCG+AGG + Chr8:79002917-79002936 None:intergenic 30.0%
ATAGGCAAAAATTAACCGTA+TGG - Chr8:79000571-79000590 MsG0880046843.01.T01:intron 30.0%
ATCATTGGCATTTAATGTCA+TGG - Chr8:79002650-79002669 MsG0880046843.01.T01:CDS 30.0%
ATGATGAATTGAATAGGCTA+GGG + Chr8:79001039-79001058 None:intergenic 30.0%
ATTTACAAGAGCAGAGAAAT+TGG - Chr8:79002109-79002128 MsG0880046843.01.T01:CDS 30.0%
CAACTAATATCAAGATTCGA+GGG + Chr8:79002916-79002935 None:intergenic 30.0%
CATGTTTAGATAATCGAACA+AGG - Chr8:79001110-79001129 MsG0880046843.01.T01:intron 30.0%
CCATTGTAAAACTAAACTTC+TGG + Chr8:79001609-79001628 None:intergenic 30.0%
CTATACTTCTATCACATTCA+CGG + Chr8:79001177-79001196 None:intergenic 30.0%
CTTGTTCGATTATCTAAACA+TGG + Chr8:79001112-79001131 None:intergenic 30.0%
GACATTAAATGCCAATGATT+TGG + Chr8:79002649-79002668 None:intergenic 30.0%
GAGAACAATGGAACAAAAAA+TGG - Chr8:78999428-78999447 MsG0880046843.01.T01:CDS 30.0%
GAGAGTTAATACTTTCATGT+TGG - Chr8:79002802-79002821 MsG0880046843.01.T01:five_prime_UTR 30.0%
GCCTATTCAATTCATCATAT+AGG - Chr8:79001041-79001060 MsG0880046843.01.T01:intron 30.0%
GGGTAACATTAAAACACATT+CGG - Chr8:79001443-79001462 MsG0880046843.01.T01:intron 30.0%
GTAGCAAATAAGTTCATTGT+TGG + Chr8:79001719-79001738 None:intergenic 30.0%
TAAAAAATATGGAGCGAAAG+AGG - Chr8:78998421-78998440 MsG0880046843.01.T01:three_prime_UTR 30.0%
TATACTTCTATCACATTCAC+GGG + Chr8:79001176-79001195 None:intergenic 30.0%
TATATGGAAGCAAGAAACAA+GGG + Chr8:79002213-79002232 None:intergenic 30.0%
TATGATGAATTGAATAGGCT+AGG + Chr8:79001040-79001059 None:intergenic 30.0%
TATGTATGTTTGTATAGGGA+TGG + Chr8:79000386-79000405 None:intergenic 30.0%
TTATATGGAAGCAAGAAACA+AGG + Chr8:79002214-79002233 None:intergenic 30.0%
TTTACAAGAGCAGAGAAATT+GGG - Chr8:79002110-79002129 MsG0880046843.01.T01:CDS 30.0%
! AAGTAGTGTTATTATCGTGT+TGG + Chr8:79000330-79000349 None:intergenic 30.0%
! AAGTTTTGCTCCTCATAATT+AGG + Chr8:79001471-79001490 None:intergenic 30.0%
! AATCAGTTCAGAATGTGTTT+TGG - Chr8:79001394-79001413 MsG0880046843.01.T01:intron 30.0%
! ACTGGGTTTTTGTAAATTCT+TGG - Chr8:79001198-79001217 MsG0880046843.01.T01:intron 30.0%
! AGTAGTGTTATTATCGTGTT+GGG + Chr8:79000329-79000348 None:intergenic 30.0%
! ATGTGATAGAAGTATAGAAC+TGG - Chr8:79001180-79001199 MsG0880046843.01.T01:intron 30.0%
! ATTGATTTACTGATACTCAC+AGG + Chr8:79001012-79001031 None:intergenic 30.0%
! CAGAATATTTCCTTTTGATG+GGG - Chr8:79002358-79002377 MsG0880046843.01.T01:CDS 30.0%
! GTTCTATTTTATGGCATGAA+AGG - Chr8:79000044-79000063 MsG0880046843.01.T01:intron 30.0%
! TACCACATAAGATTTTTCCA+AGG + Chr8:79001236-79001255 None:intergenic 30.0%
! TGTACAGAGACAAAAACTTT+TGG + Chr8:79001294-79001313 None:intergenic 30.0%
! TGTGATAGAAGTATAGAACT+GGG - Chr8:79001181-79001200 MsG0880046843.01.T01:intron 30.0%
!! AAATGGTGTTATTATCGTGT+TGG - Chr8:79000486-79000505 MsG0880046843.01.T01:intron 30.0%
!! AAGTTGATGAAAACATTGTG+AGG - Chr8:79002528-79002547 MsG0880046843.01.T01:CDS 30.0%
!! AGTTGATGAAAACATTGTGA+GGG - Chr8:79002529-79002548 MsG0880046843.01.T01:CDS 30.0%
!! ATTATGCTTAGCTTGTGATA+TGG - Chr8:78999454-78999473 MsG0880046843.01.T01:CDS 30.0%
!! CACAGATTTCATTTTTGTGA+GGG + Chr8:78998514-78998533 None:intergenic 30.0%
!! TCACAGATTTCATTTTTGTG+AGG + Chr8:78998515-78998534 None:intergenic 30.0%
!! TTTGGATTGGTTATTAGTGA+CGG - Chr8:78999704-78999723 MsG0880046843.01.T01:intron 30.0%
!!! AACCGTATGGTTTTATAGTT+AGG - Chr8:79000584-79000603 MsG0880046843.01.T01:intron 30.0%
!!! CCAGAAGTTTAGTTTTACAA+TGG - Chr8:79001606-79001625 MsG0880046843.01.T01:intron 30.0%
!!! GAGGATTTGGTTCTATTTTA+TGG - Chr8:79000035-79000054 MsG0880046843.01.T01:intron 30.0%
!!! TATGTTCTCTGCTGTTTTTT+CGG - Chr8:78999481-78999500 MsG0880046843.01.T01:CDS 30.0%
AACAAACAGGGTCCTAATTA+TGG + Chr8:79001370-79001389 None:intergenic 35.0%
AAGATTGAGGATGAGAGATA+AGG + Chr8:79002320-79002339 None:intergenic 35.0%
ACAAACAGGGTCCTAATTAT+GGG + Chr8:79001369-79001388 None:intergenic 35.0%
ACATTCGGTTCCTAATTATG+AGG - Chr8:79001458-79001477 MsG0880046843.01.T01:CDS 35.0%
ACTAATATCAAGATTCGAGG+GGG + Chr8:79002914-79002933 None:intergenic 35.0%
AGAATGGGAACTGCAAATAA+CGG + Chr8:79002283-79002302 None:intergenic 35.0%
AGATTTCAAGGTCTTTGGAT+CGG + Chr8:78998582-78998601 None:intergenic 35.0%
AGCCTTGGAAAAATCTTATG+TGG - Chr8:79001231-79001250 MsG0880046843.01.T01:intron 35.0%
AGTAAGAGGATACTGATCTT+TGG - Chr8:79000627-79000646 MsG0880046843.01.T01:intron 35.0%
ATACTTCTATCACATTCACG+GGG + Chr8:79001175-79001194 None:intergenic 35.0%
ATAGCAACTGCGAAAAGAAA+TGG - Chr8:78999404-78999423 MsG0880046843.01.T01:CDS 35.0%
ATATGGAAGCAAGAAACAAG+GGG + Chr8:79002212-79002231 None:intergenic 35.0%
ATCTCTCATCCTCAATCTTA+AGG - Chr8:79002321-79002340 MsG0880046843.01.T01:CDS 35.0%
ATCTGCGATTAAGCAATCAA+TGG - Chr8:79002477-79002496 MsG0880046843.01.T01:CDS 35.0%
ATTATGCTGAGCTAACTCTT+TGG + Chr8:79000735-79000754 None:intergenic 35.0%
ATTTACTGATACTCACAGGA+AGG + Chr8:79001008-79001027 None:intergenic 35.0%
CACTGGGTTTATATTTGGAT+TGG - Chr8:78999691-78999710 MsG0880046843.01.T01:intron 35.0%
CCTGCACAATCAATAAAATG+TGG + Chr8:79001849-79001868 None:intergenic 35.0%
CGATTGTTGTATTGCTCATA+GGG - Chr8:79001872-79001891 MsG0880046843.01.T01:CDS 35.0%
CTAAACATGGAAAAAAGAGG+TGG + Chr8:79001099-79001118 None:intergenic 35.0%
GAGCCTGTTGTATTAAATTG+AGG + Chr8:79001671-79001690 None:intergenic 35.0%
GATAATGTGAATGGATCGAA+TGG + Chr8:78998620-78998639 None:intergenic 35.0%
GTACAAGTGTGATGATTCTT+GGG - Chr8:79002499-79002518 MsG0880046843.01.T01:CDS 35.0%
TATAGCCTCTAACAATTGTG+TGG + Chr8:79001496-79001515 None:intergenic 35.0%
TCAATCAGAAGCCCATAATT+AGG - Chr8:79001355-79001374 MsG0880046843.01.T01:intron 35.0%
TCCTGAGTGATAAGCATAAT+CGG - Chr8:78999324-78999343 MsG0880046843.01.T01:CDS 35.0%
TGTACAGTAGTTATGTTTCC+TGG - Chr8:79001308-79001327 MsG0880046843.01.T01:intron 35.0%
TGTTGTTATGGTGTTTCAGT+TGG - Chr8:78999774-78999793 MsG0880046843.01.T01:intron 35.0%
TTACAAGAGCAGAGAAATTG+GGG - Chr8:79002111-79002130 MsG0880046843.01.T01:CDS 35.0%
TTGATTGCTTAATCGCAGAT+AGG + Chr8:79002477-79002496 None:intergenic 35.0%
TTGTACAGGTGTGTATACTT+TGG - Chr8:78999536-78999555 MsG0880046843.01.T01:intron 35.0%
! AACACATTCTGAACTGATTC+TGG + Chr8:79001393-79001412 None:intergenic 35.0%
! AGGTAGATATCCCAAAGTTT+TGG + Chr8:79002070-79002089 None:intergenic 35.0%
! AGTTACAAACATGCTGACTA+TGG - Chr8:79000758-79000777 MsG0880046843.01.T01:intron 35.0%
! ATCCAGTGTCGAATAGTATA+GGG - Chr8:79000426-79000445 MsG0880046843.01.T01:intron 35.0%
! ATTTCTTTTCGCAGTTGCTA+TGG + Chr8:78999405-78999424 None:intergenic 35.0%
! CATAGATCATTTGAAGCATC+AGG + Chr8:79002389-79002408 None:intergenic 35.0%
! CTTTTCCACACAATTGTTAG+AGG - Chr8:79001488-79001507 MsG0880046843.01.T01:CDS 35.0%
! GAAAAAAGAGGTGGTGTTAA+CGG + Chr8:79001090-79001109 None:intergenic 35.0%
! GTTACAAACATGCTGACTAT+GGG - Chr8:79000759-79000778 MsG0880046843.01.T01:intron 35.0%
! TATCCAGTGTCGAATAGTAT+AGG - Chr8:79000425-79000444 MsG0880046843.01.T01:intron 35.0%
! TGTACTTGCTAGAATCTGTA+AGG - Chr8:79000125-79000144 MsG0880046843.01.T01:intron 35.0%
! TTTGGGATATCTACCTTGAT+GGG - Chr8:79002074-79002093 MsG0880046843.01.T01:CDS 35.0%
!! AACTGATTCTGGAACAAACA+GGG + Chr8:79001382-79001401 None:intergenic 35.0%
!! CCACATTTTATTGATTGTGC+AGG - Chr8:79001846-79001865 MsG0880046843.01.T01:CDS 35.0%
!! CGGTGATTTGATAATGTGAA+TGG + Chr8:78998629-78998648 None:intergenic 35.0%
!! CTAACTCTTTGGCTTGTAAT+GGG + Chr8:79000724-79000743 None:intergenic 35.0%
!! TTGACTTGGAACCAAATCAA+GGG - Chr8:79001982-79002001 MsG0880046843.01.T01:CDS 35.0%
!!! AAATTGAGGTTTTCAAGTGC+AGG + Chr8:79001657-79001676 None:intergenic 35.0%
!!! AACGAGCCAGTATTTTTTGT+AGG - Chr8:79002832-79002851 MsG0880046843.01.T01:five_prime_UTR 35.0%
!!! ATGTTCTCTGCTGTTTTTTC+GGG - Chr8:78999482-78999501 MsG0880046843.01.T01:CDS 35.0%
!!! TGAAATCTGACCGTTGATTT+TGG + Chr8:78998661-78998680 None:intergenic 35.0%
AAAATATGGAGCGAAAGAGG+TGG - Chr8:78998424-78998443 MsG0880046843.01.T01:three_prime_UTR 40.0%
AAATATGGAGCGAAAGAGGT+GGG - Chr8:78998425-78998444 MsG0880046843.01.T01:three_prime_UTR 40.0%
AACTCTTCAGTGCACAAAGA+AGG + Chr8:79001741-79001760 None:intergenic 40.0%
AAGAACTTTGCTGGGCTATA+GGG + Chr8:78999518-78999537 None:intergenic 40.0%
ACCGATTATGCTTATCACTC+AGG + Chr8:78999328-78999347 None:intergenic 40.0%
ACCTGTACAAGAACTTTGCT+GGG + Chr8:78999526-78999545 None:intergenic 40.0%
ACTGCTGACAGAAAAACTTC+TGG + Chr8:79002142-79002161 None:intergenic 40.0%
AGAAACCAGAGCTTCAACAA+AGG + Chr8:79000228-79000247 None:intergenic 40.0%
AGAAGTCATGGCATATCGTT+AGG + Chr8:79002693-79002712 None:intergenic 40.0%
AGTTGTTGATGTGAAACCAC+AGG + Chr8:79001937-79001956 None:intergenic 40.0%
ATCCCTATACTATTCGACAC+TGG + Chr8:79000431-79000450 None:intergenic 40.0%
ATCTGTAAGGTGGCTTCTAT+TGG - Chr8:79000138-79000157 MsG0880046843.01.T01:intron 40.0%
ATGAAACAAGGGATTGAGGT+GGG + Chr8:79000553-79000572 None:intergenic 40.0%
ATGTGAATGGATCGAATGGA+TGG + Chr8:78998616-78998635 None:intergenic 40.0%
CATCCTCAATCTTAAGGAGT+CGG - Chr8:79002327-79002346 MsG0880046843.01.T01:CDS 40.0%
CTCAGGAAGTAATTCCTCAA+CGG + Chr8:78999311-78999330 None:intergenic 40.0%
CTGATCAATGTCAACTCCTA+GGG + Chr8:79000929-79000948 None:intergenic 40.0%
CTTGAACTTGCGTTTCATGA+AGG - Chr8:79001808-79001827 MsG0880046843.01.T01:intron 40.0%
GAAGTCATGGCATATCGTTA+GGG + Chr8:79002692-79002711 None:intergenic 40.0%
GCGATTGTTGTATTGCTCAT+AGG - Chr8:79001871-79001890 MsG0880046843.01.T01:CDS 40.0%
GCTTCTGATTGAGATTAAGG+AGG + Chr8:79001347-79001366 None:intergenic 40.0%
GGATGGAAGAGAGTAAAAGT+AGG - Chr8:78998451-78998470 MsG0880046843.01.T01:three_prime_UTR 40.0%
GGTACAAGTGTGATGATTCT+TGG - Chr8:79002498-79002517 MsG0880046843.01.T01:CDS 40.0%
GGTATGTCTGTTTCAACTCA+TGG - Chr8:79000273-79000292 MsG0880046843.01.T01:intron 40.0%
GTCATGTCCTCCAAAATCAA+CGG - Chr8:78998648-78998667 MsG0880046843.01.T01:three_prime_UTR 40.0%
GTGTATGAATGGAGAAGTCA+TGG + Chr8:79002705-79002724 None:intergenic 40.0%
GTTATTATCGTGTTGGAAGG+TGG - Chr8:79000493-79000512 MsG0880046843.01.T01:intron 40.0%
TAAATCGGTTGCCTCATGAT+TGG - Chr8:79002610-79002629 MsG0880046843.01.T01:CDS 40.0%
TATGAAACAAGGGATTGAGG+TGG + Chr8:79000554-79000573 None:intergenic 40.0%
TCAATCTTAAGGAGTCGGTT+TGG - Chr8:79002332-79002351 MsG0880046843.01.T01:CDS 40.0%
TCTGATCAATGTCAACTCCT+AGG + Chr8:79000930-79000949 None:intergenic 40.0%
TCTGTTTCAACTCATGGCTT+TGG - Chr8:79000279-79000298 MsG0880046843.01.T01:intron 40.0%
TCTTTGGATCGGAGAATCAA+CGG + Chr8:78998571-78998590 None:intergenic 40.0%
TGGGCTTCTGATTGAGATTA+AGG + Chr8:79001350-79001369 None:intergenic 40.0%
TGTTATGGTGTTTCAGTTGG+TGG - Chr8:78999777-78999796 MsG0880046843.01.T01:intron 40.0%
TTAGTAGAACCCCCTTGATT+TGG + Chr8:79001996-79002015 None:intergenic 40.0%
TTCACGGGGTTAAAATGCTA+AGG + Chr8:79001161-79001180 None:intergenic 40.0%
TTGGGATATCTACCTTGATG+GGG - Chr8:79002075-79002094 MsG0880046843.01.T01:CDS 40.0%
TTTGTATTTGGCTGAGAGAG+AGG - Chr8:79000016-79000035 MsG0880046843.01.T01:intron 40.0%
! AAACCGACTCCTTAAGATTG+AGG + Chr8:79002333-79002352 None:intergenic 40.0%
! ACCTCAATCCCTTGTTTCAT+AGG - Chr8:79000553-79000572 MsG0880046843.01.T01:intron 40.0%
! ACTTGCTAGAATCTGTAAGG+TGG - Chr8:79000128-79000147 MsG0880046843.01.T01:intron 40.0%
! AGTGTCGAATAGTATAGGGA+TGG - Chr8:79000430-79000449 MsG0880046843.01.T01:intron 40.0%
! AGTGTTATTATCGTGTTGGG+AGG + Chr8:79000326-79000345 None:intergenic 40.0%
! ATTGCTCATAGGGTATTCTC+TGG - Chr8:79001882-79001901 MsG0880046843.01.T01:CDS 40.0%
! CATCAGCATTGCTCATTTTC+TGG + Chr8:78999358-78999377 None:intergenic 40.0%
! CCAACTTTCTGGAAACTTGA+GGG - Chr8:79002859-79002878 MsG0880046843.01.T01:five_prime_UTR 40.0%
! GGAGTGCCTACAAAAAATAC+TGG + Chr8:79002841-79002860 None:intergenic 40.0%
! GGATAATGTAGGCTTTGGTT+TGG + Chr8:79000532-79000551 None:intergenic 40.0%
! GGGTATTCTCTGGTATTTTG+CGG - Chr8:79001892-79001911 MsG0880046843.01.T01:CDS 40.0%
! GTTTTTCTGTCAGCAGTGTA+AGG - Chr8:79002145-79002164 MsG0880046843.01.T01:CDS 40.0%
! TCCAACTTTCTGGAAACTTG+AGG - Chr8:79002858-79002877 MsG0880046843.01.T01:five_prime_UTR 40.0%
! TGACTTGGAACCAAATCAAG+GGG - Chr8:79001983-79002002 MsG0880046843.01.T01:CDS 40.0%
! TGTTGAAGCTCTGGTTTCTT+TGG - Chr8:79000229-79000248 MsG0880046843.01.T01:intron 40.0%
! TTGTTCATAGCTTGCAAGGT+TGG + Chr8:78999819-78999838 None:intergenic 40.0%
! TTTCTGGAAACTTGAGGGTA+TGG - Chr8:79002864-79002883 MsG0880046843.01.T01:five_prime_UTR 40.0%
!! AGATATCCCAAAGTTTTGGC+TGG + Chr8:79002066-79002085 None:intergenic 40.0%
!! CTTGACTTGGAACCAAATCA+AGG - Chr8:79001981-79002000 MsG0880046843.01.T01:CDS 40.0%
!! CTTGGCTAAGATTTTAGCCT+TGG - Chr8:79001216-79001235 MsG0880046843.01.T01:intron 40.0%
!! CTTTGGGATATCTACCTTGA+TGG - Chr8:79002073-79002092 MsG0880046843.01.T01:CDS 40.0%
!! GAACTGATTCTGGAACAAAC+AGG + Chr8:79001383-79001402 None:intergenic 40.0%
!! GCTAACTCTTTGGCTTGTAA+TGG + Chr8:79000725-79000744 None:intergenic 40.0%
!! GGTGTTATTATCGTGTTGGA+AGG - Chr8:79000490-79000509 MsG0880046843.01.T01:intron 40.0%
!! GTGTGTATACTTTGGAGCTT+AGG - Chr8:78999544-78999563 MsG0880046843.01.T01:intron 40.0%
!! GTTGATTTTGGAGGACATGA+CGG + Chr8:78998649-78998668 None:intergenic 40.0%
!! TTCAACTCATGGCTTTGGTT+TGG - Chr8:79000284-79000303 MsG0880046843.01.T01:intron 40.0%
!! TTTCATGAATTCGGTGTTGC+AGG - Chr8:78999268-78999287 MsG0880046843.01.T01:CDS 40.0%
!!! AATCTGACCGTTGATTTTGG+AGG + Chr8:78998658-78998677 None:intergenic 40.0%
AACAAGGGGAAGCTTCCTTA+TGG + Chr8:79002198-79002217 None:intergenic 45.0%
AACATTGAAATGCAGGGCGA+GGG - Chr8:79000883-79000902 MsG0880046843.01.T01:intron 45.0%
AGGAAGTAATTCCTCAACGG+TGG + Chr8:78999308-78999327 None:intergenic 45.0%
AGGTGGGATAATGTAGGCTT+TGG + Chr8:79000537-79000556 None:intergenic 45.0%
ATCCGGAGAATCTCAGAAAG+CGG - Chr8:78999114-78999133 MsG0880046843.01.T01:CDS 45.0%
ATGACCAGGAGACATTGATG+CGG + Chr8:78998931-78998950 None:intergenic 45.0%
ATGCCTTTGATCAGAGGTCT+CGG + Chr8:78999589-78999608 None:intergenic 45.0%
ATGCTAAGGCAACTTTCTCC+CGG + Chr8:79001147-79001166 None:intergenic 45.0%
CAACACTGACACATCAACAC+TGG + Chr8:78999614-78999633 None:intergenic 45.0%
CAAGAACTTTGCTGGGCTAT+AGG + Chr8:78999519-78999538 None:intergenic 45.0%
CAATCCTTCTTGCAATGGTG+AGG - Chr8:79002034-79002053 MsG0880046843.01.T01:CDS 45.0%
CACCTGTACAAGAACTTTGC+TGG + Chr8:78999527-78999546 None:intergenic 45.0%
CACGATCGTAAACCTGATCA+CGG + Chr8:78999001-78999020 None:intergenic 45.0%
CACTCTGGTAAGTTAGATGC+TGG - Chr8:79002440-79002459 MsG0880046843.01.T01:CDS 45.0%
CCCTCAAGTTTCCAGAAAGT+TGG + Chr8:79002862-79002881 None:intergenic 45.0%
CCGATTCCAGCCAAAACTTT+GGG - Chr8:79002057-79002076 MsG0880046843.01.T01:CDS 45.0%
CCTTGCAAGCTATGAACAAC+AGG - Chr8:78999820-78999839 MsG0880046843.01.T01:intron 45.0%
CGTAGACATCTCACTTGACT+TGG - Chr8:79001968-79001987 MsG0880046843.01.T01:CDS 45.0%
CTCACCATTGCAAGAAGGAT+TGG + Chr8:79002036-79002055 None:intergenic 45.0%
CTCTCAAGCAGATGTCCATA+AGG - Chr8:79002180-79002199 MsG0880046843.01.T01:CDS 45.0%
CTGGATATGCCTTTGATCAG+AGG + Chr8:78999595-78999614 None:intergenic 45.0%
CTTCACAGGGACAACATATC+TGG + Chr8:79000085-79000104 None:intergenic 45.0%
GACTTGGAACCAAATCAAGG+GGG - Chr8:79001984-79002003 MsG0880046843.01.T01:CDS 45.0%
GAGGAATTTCGTGAGGATCA+CGG + Chr8:78998794-78998813 None:intergenic 45.0%
GATCCATGAAAAGGTGGACA+AGG - Chr8:78999877-78999896 MsG0880046843.01.T01:intron 45.0%
GATGCGGAGTAGATGACATA+GGG + Chr8:78999097-78999116 None:intergenic 45.0%
GATGTTATGTGTATGGCCTG+TGG - Chr8:79001918-79001937 MsG0880046843.01.T01:CDS 45.0%
GCCTATGAAACAAGGGATTG+AGG + Chr8:79000557-79000576 None:intergenic 45.0%
GCGGTCAGATGTTATGTGTA+TGG - Chr8:79001911-79001930 MsG0880046843.01.T01:CDS 45.0%
GCTTCCAATCCTTCTTGCAA+TGG - Chr8:79002029-79002048 MsG0880046843.01.T01:CDS 45.0%
GCTTGATGGGATCCATGAAA+AGG - Chr8:78999868-78999887 MsG0880046843.01.T01:intron 45.0%
GGAAGAGTGACATGATACAG+CGG + Chr8:78998874-78998893 None:intergenic 45.0%
GGATTGAGGTGGGATAATGT+AGG + Chr8:79000543-79000562 None:intergenic 45.0%
GGCAGAATCATCACCATTTG+CGG + Chr8:78999384-78999403 None:intergenic 45.0%
GGGAAATCAGGAACGTTGAT+CGG + Chr8:78999209-78999228 None:intergenic 45.0%
GTCGAATAGTATAGGGATGG+CGG - Chr8:79000433-79000452 MsG0880046843.01.T01:intron 45.0%
GTGACATGTCCAGTGAGAAT+GGG + Chr8:79002298-79002317 None:intergenic 45.0%
GTTATTATCGTGTTGGGAGG+AGG + Chr8:79000323-79000342 None:intergenic 45.0%
TAACACCATCGAGATAGCAC+AGG + Chr8:79000978-79000997 None:intergenic 45.0%
TAACATTGAAATGCAGGGCG+AGG - Chr8:79000882-79000901 MsG0880046843.01.T01:intron 45.0%
TATGTCATCTACTCCGCATC+CGG - Chr8:78999097-78999116 MsG0880046843.01.T01:CDS 45.0%
TCAAGGGGGTTCTACTAAGA+TGG - Chr8:79001998-79002017 MsG0880046843.01.T01:CDS 45.0%
TCAAGTGAGATGTCTACGCA+CGG + Chr8:79001966-79001985 None:intergenic 45.0%
TCGAACCTTTGTTGAAGCTC+TGG - Chr8:79000220-79000239 MsG0880046843.01.T01:intron 45.0%
TGATGGGATCCATGAAAAGG+TGG - Chr8:78999871-78999890 MsG0880046843.01.T01:intron 45.0%
TTGAAGGACGGTAATCCACT+CGG + Chr8:78999142-78999161 None:intergenic 45.0%
TTGCAGTGAGGAATTTCGTG+AGG + Chr8:78998801-78998820 None:intergenic 45.0%
TTGTAGGCACTCCAACTTTC+TGG - Chr8:79002848-79002867 MsG0880046843.01.T01:five_prime_UTR 45.0%
TTTGCAGTTCCCATTCTCAC+TGG - Chr8:79002286-79002305 MsG0880046843.01.T01:CDS 45.0%
TTTGGCTGAGAGAGAGGATT+TGG - Chr8:79000022-79000041 MsG0880046843.01.T01:intron 45.0%
! AATGCTGATGATGCCGCAAA+TGG - Chr8:78999368-78999387 MsG0880046843.01.T01:CDS 45.0%
! ATAGCTTGCAAGGTTGGACT+TGG + Chr8:78999813-78999832 None:intergenic 45.0%
! CAGGTGATGGTCCAAATCAT+TGG - Chr8:79002635-79002654 MsG0880046843.01.T01:CDS 45.0%
! CCTGTTGTTCATAGCTTGCA+AGG + Chr8:78999823-78999842 None:intergenic 45.0%
! GATCCTTGTCCACCTTTTCA+TGG + Chr8:78999883-78999902 None:intergenic 45.0%
! TGCTATCTCGATGGTGTTAG+CGG - Chr8:79000979-79000998 MsG0880046843.01.T01:intron 45.0%
!! TTTCTGAGATTCTCCGGATG+CGG + Chr8:78999113-78999132 None:intergenic 45.0%
!!! CCCAAAGTTTTGGCTGGAAT+CGG + Chr8:79002060-79002079 None:intergenic 45.0%
AAACATTGTGAGGGCTGCTC+AGG - Chr8:79002538-79002557 MsG0880046843.01.T01:CDS 50.0%
AACAAGGCTTGTCTATCCCC+GGG - Chr8:79001126-79001145 MsG0880046843.01.T01:intron 50.0%
AACATTGTGAGGGCTGCTCA+GGG - Chr8:79002539-79002558 MsG0880046843.01.T01:CDS 50.0%
AAGCATCAAAGAGGGGAGGA+GGG + Chr8:79002944-79002963 None:intergenic 50.0%
ACTCCTGCATAGAGGGAGTA+TGG - Chr8:79001422-79001441 MsG0880046843.01.T01:intron 50.0%
AGACATTGATGCGGCATGTG+CGG + Chr8:78998922-78998941 None:intergenic 50.0%
AGATTCAGAGTGGGAGGGAA+TGG + Chr8:78998545-78998564 None:intergenic 50.0%
ATGAGATGCAGGCATAGAGG+CGG + Chr8:78998848-78998867 None:intergenic 50.0%
ATGGAGGGAGAGGAATGGTT+TGG + Chr8:78998727-78998746 None:intergenic 50.0%
CAACGGCTGAGATTCAGAGT+GGG + Chr8:78998554-78998573 None:intergenic 50.0%
CAAGTGAGATGTCTACGCAC+GGG + Chr8:79001965-79001984 None:intergenic 50.0%
CAGAGGTCTCGGTGATAAAC+AGG + Chr8:78999578-78999597 None:intergenic 50.0%
CAGTTATGGAGGGAGAGGAA+TGG + Chr8:78998732-78998751 None:intergenic 50.0%
CATCACCTGTGCCAATCATG+AGG + Chr8:79002624-79002643 None:intergenic 50.0%
CGACGTAAGCCACACAATGA+AGG - Chr8:78999902-78999921 MsG0880046843.01.T01:intron 50.0%
CTCATGATTGGCACAGGTGA+TGG - Chr8:79002622-79002641 MsG0880046843.01.T01:CDS 50.0%
GAACAAGGCTTGTCTATCCC+CGG - Chr8:79001125-79001144 MsG0880046843.01.T01:intron 50.0%
GAATTTCGTGAGGATCACGG+CGG + Chr8:78998791-78998810 None:intergenic 50.0%
GCAAACGCAGCAGAAAAGCT+CGG + Chr8:78998979-78998998 None:intergenic 50.0%
GCCCAGCAAAGTTCTTGTAC+AGG - Chr8:78999522-78999541 MsG0880046843.01.T01:intron 50.0%
GGAGGACTTGCAAAGAAACC+AGG + Chr8:79001329-79001348 None:intergenic 50.0%
GGATGCGGAGTAGATGACAT+AGG + Chr8:78999098-78999117 None:intergenic 50.0%
GGATTACCGTCCTTCAACTC+CGG - Chr8:78999145-78999164 MsG0880046843.01.T01:CDS 50.0%
GGTGACATGTCCAGTGAGAA+TGG + Chr8:79002299-79002318 None:intergenic 50.0%
GTAGATCCGGAGTTGAAGGA+CGG + Chr8:78999154-78999173 None:intergenic 50.0%
GTTTGATCCGGAGGCAGTTA+TGG + Chr8:78998746-78998765 None:intergenic 50.0%
TACCCATACTCCCTCTATGC+AGG + Chr8:79001428-79001447 None:intergenic 50.0%
TCAACGGCTGAGATTCAGAG+TGG + Chr8:78998555-78998574 None:intergenic 50.0%
TCAACGTTCCTGATTTCCCG+CGG - Chr8:78999210-78999229 MsG0880046843.01.T01:CDS 50.0%
TCACACCTGTGCTATCTCGA+TGG - Chr8:79000970-79000989 MsG0880046843.01.T01:intron 50.0%
TCACCGAGACCTCTGATCAA+AGG - Chr8:78999583-78999602 MsG0880046843.01.T01:intron 50.0%
TCAGCAGTGTAAGGTGAAGC+AGG - Chr8:79002154-79002173 MsG0880046843.01.T01:CDS 50.0%
TCAGGCTCATCCCCATCAAA+AGG + Chr8:79002371-79002390 None:intergenic 50.0%
TCGATTGCGATCTGATGACC+AGG + Chr8:78998945-78998964 None:intergenic 50.0%
TCTATCCAAGCACCCCATCA+AGG + Chr8:79002090-79002109 None:intergenic 50.0%
TGCTAAGGCAACTTTCTCCC+GGG + Chr8:79001146-79001165 None:intergenic 50.0%
TTGCGGGGGTTGAACAATCT+CGG - Chr8:78999236-78999255 MsG0880046843.01.T01:CDS 50.0%
TTGCTGGGCTATAGGGAAGA+CGG + Chr8:78999511-78999530 None:intergenic 50.0%
! ATCTACCTTGATGGGGTGCT+TGG - Chr8:79002082-79002101 MsG0880046843.01.T01:CDS 50.0%
! CTCCTGCATAGAGGGAGTAT+GGG - Chr8:79001423-79001442 MsG0880046843.01.T01:intron 50.0%
! GCCGATTCCAGCCAAAACTT+TGG - Chr8:79002056-79002075 MsG0880046843.01.T01:CDS 50.0%
! TTTGCTGTCGTCACTCACTC+TGG - Chr8:79002425-79002444 MsG0880046843.01.T01:CDS 50.0%
!! GGAATGGTTTGGTGGAAGAG+CGG + Chr8:78998716-78998735 None:intergenic 50.0%
!! TTTTTCTCCGTCGCCGATTG+TGG + Chr8:78999063-78999082 None:intergenic 50.0%
AACGTTCCTGATTTCCCGCG+GGG - Chr8:78999212-78999231 MsG0880046843.01.T01:CDS 55.0%
ACCACAACCATGTCCCCACT+TGG - Chr8:78998680-78998699 MsG0880046843.01.T01:three_prime_UTR 55.0%
AGCATCAAAGAGGGGAGGAG+GGG + Chr8:79002943-79002962 None:intergenic 55.0%
ATGGAGCGAAAGAGGTGGGA+TGG - Chr8:78998429-78998448 MsG0880046843.01.T01:three_prime_UTR 55.0%
ATTCCTCACTGCAACGCCTG+CGG - Chr8:78998807-78998826 MsG0880046843.01.T01:CDS 55.0%
CAACGTTCCTGATTTCCCGC+GGG - Chr8:78999211-78999230 MsG0880046843.01.T01:CDS 55.0%
CAGACCGTTGCGTCCACAAT+CGG - Chr8:78999047-78999066 MsG0880046843.01.T01:CDS 55.0%
CATGCCGCATCAATGTCTCC+TGG - Chr8:78998924-78998943 MsG0880046843.01.T01:CDS 55.0%
CGCATGAGATGCAGGCATAG+AGG + Chr8:78998851-78998870 None:intergenic 55.0%
GAAATGCAGGGCGAGGGTTT+AGG - Chr8:79000889-79000908 MsG0880046843.01.T01:intron 55.0%
GATCCGGAGGCAGTTATGGA+GGG + Chr8:78998742-78998761 None:intergenic 55.0%
GCTAAGGCAACTTTCTCCCG+GGG + Chr8:79001145-79001164 None:intergenic 55.0%
GGACTGCACTCCTGCATAGA+GGG - Chr8:79001415-79001434 MsG0880046843.01.T01:intron 55.0%
GGCTGAGATTCAGAGTGGGA+GGG + Chr8:78998550-78998569 None:intergenic 55.0%
GGGCTGCGCTTCACTCAATA+TGG + Chr8:78998494-78998513 None:intergenic 55.0%
GGTTGCCTCATGATTGGCAC+AGG - Chr8:79002616-79002635 MsG0880046843.01.T01:CDS 55.0%
TCATGTCACTCTTCCACCGC+CGG - Chr8:78998879-78998898 MsG0880046843.01.T01:CDS 55.0%
TCGCGTAGATCCGGAGTTGA+AGG + Chr8:78999158-78999177 None:intergenic 55.0%
TCGGCCTCACCATTGCAAGA+AGG + Chr8:79002041-79002060 None:intergenic 55.0%
TCTCCCTCCATAACTGCCTC+CGG - Chr8:78998736-78998755 MsG0880046843.01.T01:exon 55.0%
TGAGATGCAGGCATAGAGGC+GGG + Chr8:78998847-78998866 None:intergenic 55.0%
TGATCCGGAGGCAGTTATGG+AGG + Chr8:78998743-78998762 None:intergenic 55.0%
TGGACTGCACTCCTGCATAG+AGG - Chr8:79001414-79001433 MsG0880046843.01.T01:intron 55.0%
TGGAGCGAAAGAGGTGGGAT+GGG - Chr8:78998430-78998449 MsG0880046843.01.T01:three_prime_UTR 55.0%
TGTTTCACACGCCACCGTTG+AGG - Chr8:78999294-78999313 MsG0880046843.01.T01:CDS 55.0%
TTCAGAGTGGGAGGGAATGG+AGG + Chr8:78998542-78998561 None:intergenic 55.0%
! GAGGGAGAGGAATGGTTTGG+TGG + Chr8:78998724-78998743 None:intergenic 55.0%
! GGTCTCTTGCTTGTTGCCCT+AGG - Chr8:79000910-79000929 MsG0880046843.01.T01:intron 55.0%
!! ATGGTTTGGTGGAAGAGCGG+CGG + Chr8:78998713-78998732 None:intergenic 55.0%
!! CGCCGCTTTCTGAGATTCTC+CGG + Chr8:78999119-78999138 None:intergenic 55.0%
AACTCGGCCAAGTGGGGACA+TGG + Chr8:78998690-78998709 None:intergenic 60.0%
AGAGCGCGTTCGCGTAGATC+CGG + Chr8:78999167-78999186 None:intergenic 60.0%
ATGCAGGCATAGAGGCGGGA+AGG + Chr8:78998843-78998862 None:intergenic 60.0%
CATTGATGCGGCATGTGCGG+CGG + Chr8:78998919-78998938 None:intergenic 60.0%
CGGCTGAGATTCAGAGTGGG+AGG + Chr8:78998551-78998570 None:intergenic 60.0%
CTACGCGAACGCGCTCTGAT+CGG - Chr8:78999170-78999189 MsG0880046843.01.T01:CDS 60.0%
CTGATTTCCCGCGGGGATTG+CGG - Chr8:78999219-78999238 MsG0880046843.01.T01:CDS 60.0%
CTGCTGCGTTTGCCGTGATC+AGG - Chr8:78998986-78999005 MsG0880046843.01.T01:CDS 60.0%
GCCAAGTGGGGACATGGTTG+TGG + Chr8:78998684-78998703 None:intergenic 60.0%
GCGAAAGAGGTGGGATGGGA+TGG - Chr8:78998434-78998453 MsG0880046843.01.T01:three_prime_UTR 60.0%
GGAGGCAGTTATGGAGGGAG+AGG + Chr8:78998737-78998756 None:intergenic 60.0%
GGCGGCGTGAGAAATGACAC+CGG + Chr8:78998901-78998920 None:intergenic 60.0%
GGCGTGAGAAATGACACCGG+CGG + Chr8:78998898-78998917 None:intergenic 60.0%
GGTCTGTGCGATCACGACTG+CGG + Chr8:78999033-78999052 None:intergenic 60.0%
GTGAGAAATGACACCGGCGG+TGG + Chr8:78998895-78998914 None:intergenic 60.0%
GTTGCGTCCACAATCGGCGA+CGG - Chr8:78999053-78999072 MsG0880046843.01.T01:CDS 60.0%
TACAGCGGCGCATGAGATGC+AGG + Chr8:78998859-78998878 None:intergenic 60.0%
TGATTTCCCGCGGGGATTGC+GGG - Chr8:78999220-78999239 MsG0880046843.01.T01:CDS 60.0%
TGCCTCCGGATCAAACCTCC+CGG - Chr8:78998750-78998769 MsG0880046843.01.T01:CDS 60.0%
TTCGTGAGGATCACGGCGGA+GGG + Chr8:78998787-78998806 None:intergenic 60.0%
TTTCGTGAGGATCACGGCGG+AGG + Chr8:78998788-78998807 None:intergenic 60.0%
! GTCGCCGATTGTGGACGCAA+CGG + Chr8:78999054-78999073 None:intergenic 60.0%
ATTTCCCGCGGGGATTGCGG+GGG - Chr8:78999222-78999241 MsG0880046843.01.T01:CDS 65.0%
CGCAATCCCCGCGGGAAATC+AGG + Chr8:78999221-78999240 None:intergenic 65.0%
CTCCGGATCAAACCTCCCGG+CGG - Chr8:78998753-78998772 MsG0880046843.01.T01:CDS 65.0%
GATTTCCCGCGGGGATTGCG+GGG - Chr8:78999221-78999240 MsG0880046843.01.T01:CDS 65.0%
GGAAGGAGCAGAGAGACCGC+AGG + Chr8:78998826-78998845 None:intergenic 65.0%
GGTGGAAGAGCGGCGGAACT+CGG + Chr8:78998706-78998725 None:intergenic 65.0%
TTCAACCCCCGCAATCCCCG+CGG + Chr8:78999230-78999249 None:intergenic 65.0%
! AGACCGCAGGCGTTGCAGTG+AGG + Chr8:78998813-78998832 None:intergenic 65.0%
! TCTCAGAAAGCGGCGCCGAG+TGG - Chr8:78999124-78999143 MsG0880046843.01.T01:CDS 65.0%
AGCGGCGGAACTCGGCCAAG+TGG + Chr8:78998698-78998717 None:intergenic 70.0%
CGCCGGGAGGTTTGATCCGG+AGG + Chr8:78998755-78998774 None:intergenic 70.0%
CGGCGGAACTCGGCCAAGTG+GGG + Chr8:78998696-78998715 None:intergenic 70.0%
GCGGCGGAACTCGGCCAAGT+GGG + Chr8:78998697-78998716 None:intergenic 70.0%
GGCCGCCGGGAGGTTTGATC+CGG + Chr8:78998758-78998777 None:intergenic 70.0%
GTGAGGATCACGGCGGAGGG+AGG + Chr8:78998784-78998803 None:intergenic 70.0%
TCAACCCCCGCAATCCCCGC+GGG + Chr8:78999229-78999248 None:intergenic 70.0%
GATCACGGCGGAGGGAGGCG+CGG + Chr8:78998779-78998798 None:intergenic 75.0%
!! AGGGAGGCGCGGCCGCCGGG+AGG + Chr8:78998768-78998787 None:intergenic 90.0%
!! CGGAGGGAGGCGCGGCCGCC+GGG + Chr8:78998771-78998790 None:intergenic 90.0%
!! GCGGAGGGAGGCGCGGCCGC+CGG + Chr8:78998772-78998791 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
Chr8 gene 78998410 79002963 78998410 ID=MsG0880046843.01;Name=MsG0880046843.01
Chr8 mRNA 78998410 79002963 78998410 ID=MsG0880046843.01.T01;Parent=MsG0880046843.01;Name=MsG0880046843.01.T01;_AED=0.31;_eAED=0.31;_QI=241|1|1|1|1|1|3|335|594
Chr8 exon 78998410 78999505 78998410 ID=MsG0880046843.01.T01:exon:33361;Parent=MsG0880046843.01.T01
Chr8 exon 79001450 79001580 79001450 ID=MsG0880046843.01.T01:exon:33360;Parent=MsG0880046843.01.T01
Chr8 exon 79001830 79002963 79001830 ID=MsG0880046843.01.T01:exon:33359;Parent=MsG0880046843.01.T01
Chr8 five_prime_UTR 79002723 79002963 79002723 ID=MsG0880046843.01.T01:five_prime_utr;Parent=MsG0880046843.01.T01
Chr8 CDS 79001830 79002722 79001830 ID=MsG0880046843.01.T01:cds;Parent=MsG0880046843.01.T01
Chr8 CDS 79001450 79001580 79001450 ID=MsG0880046843.01.T01:cds;Parent=MsG0880046843.01.T01
Chr8 CDS 78998745 78999505 78998745 ID=MsG0880046843.01.T01:cds;Parent=MsG0880046843.01.T01
Chr8 three_prime_UTR 78998410 78998744 78998410 ID=MsG0880046843.01.T01:three_prime_utr;Parent=MsG0880046843.01.T01
Gene Sequence

>MsG0880046843.01.T01

ATGTCCTCCAAAATCAACGGTCAGATTTCACCACAACCATGTCCCCACTTGGCCGAGTTCCGCCGCTCTTCCACCAAACCATTCCTCTCCCTCCATAACTGCCTCCGGATCAAACCTCCCGGCGGCCGCGCCTCCCTCCGCCGTGATCCTCACGAAATTCCTCACTGCAACGCCTGCGGTCTCTCTGCTCCTTCCCGCCTCTATGCCTGCATCTCATGCGCCGCTGTATCATGTCACTCTTCCACCGCCGGTGTCATTTCTCACGCCGCCGCACATGCCGCATCAATGTCTCCTGGTCATCAGATCGCAATCGACGTCGATCGTGCCGAGCTTTTCTGCTGCGTTTGCCGTGATCAGGTTTACGATCGTGATTTCGACGCCGCAGTCGTGATCGCACAGACCGTTGCGTCCACAATCGGCGACGGAGAAAAATCAACAGTGATCCCTATGTCATCTACTCCGCATCCGGAGAATCTCAGAAAGCGGCGCCGAGTGGATTACCGTCCTTCAACTCCGGATCTACGCGAACGCGCTCTGATCGGAAGTTGTTCTTCTCCGATCAACGTTCCTGATTTCCCGCGGGGATTGCGGGGGTTGAACAATCTCGGAAACACTTGTTTCATGAATTCGGTGTTGCAGGCTTTGTTTCACACGCCACCGTTGAGGAATTACTTCCTGAGTGATAAGCATAATCGGTACTTTTGCCAGAAAATGAGCAATGCTGATGATGCCGCAAATGGTGATGATTCTGCCATAGCAACTGCGAAAAGAAATGGAGAGAACAATGGAACAAAAAATGGACGATTATGCTTAGCTTGTGATATGGATGCTATGTTCTCTGCTGTTTTTTCGGGAGACCGTCTTCCCTATAGCCCAGCAAAGTTCTTGTACAGTTGGTGGCAGCATGCAGCCAAGTCCAACCTTGCAAGCTATGAACAACAGGATGCACATGAATTTTTCATTTCAATGCTTGATGGGATCCATGAAAAGGTGGACAAGGATCGACGTAAGCCACACAATGAAGGCAGCGATTGTTGTATTGCTCATAGGGTATTCTCTGGTATTTTGCGGTCAGATGTTATGTGTATGGCCTGTGGTTTCACATCAACAACTTATGACCCGTGCGTAGACATCTCACTTGACTTGGAACCAAATCAAGGGGGTTCTACTAAGATGGCTGCTGCAGCTTCCAATCCTTCTTGCAATGGTGAGGCCGATTCCAGCCAAAACTTTGGGATATCTACCTTGATGGGGTGCTTGGATAGATTTACAAGAGCAGAGAAATTGGGGTCAAACCAGAAGTTTTTCTGTCAGCAGTGTAAGGTGAAGCAGGAAACTCTCAAGCAGATGTCCATAAGGAAGCTTCCCCTTGTTTCTTGCTTCCATATAAAAAGATTTGAGCACTCTTCAAGAAAAAAAATGTCAAGGAAGGTGGACCGTTATTTGCAGTTCCCATTCTCACTGGACATGTCACCTTATCTCTCATCCTCAATCTTAAGGAGTCGGTTTGGTAACAGAATATTTCCTTTTGATGGGGATGAGCCTGATGCTTCAAATGATCTATGTTCTGAGTTTGAATTGTTTGCTGTCGTCACTCACTCTGGTAAGTTAGATGCTGGTCATTATGTGACCTATCTGCGATTAAGCAATCAATGGTACAAGTGTGATGATTCTTGGGTTACTCAAGTTGATGAAAACATTGTGAGGGCTGCTCAGGGTTATATGATGTTCTATGTACAGAAGATGCTTTACTATAAAGCAACTGATAAATCGGTTGCCTCATGA
Protein sequence

>MsG0880046843.01.T01

MSSKINGQISPQPCPHLAEFRRSSTKPFLSLHNCLRIKPPGGRASLRRDPHEIPHCNACGLSAPSRLYACISCAAVSCHSSTAGVISHAAAHAASMSPGHQIAIDVDRAELFCCVCRDQVYDRDFDAAVVIAQTVASTIGDGEKSTVIPMSSTPHPENLRKRRRVDYRPSTPDLRERALIGSCSSPINVPDFPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDKHNRYFCQKMSNADDAANGDDSAIATAKRNGENNGTKNGRLCLACDMDAMFSAVFSGDRLPYSPAKFLYSWWQHAAKSNLASYEQQDAHEFFISMLDGIHEKVDKDRRKPHNEGSDCCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNQGGSTKMAAAASNPSCNGEADSSQNFGISTLMGCLDRFTRAEKLGSNQKFFCQQCKVKQETLKQMSIRKLPLVSCFHIKRFEHSSRKKMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFPFDGDEPDASNDLCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDSWVTQVDENIVRAAQGYMMFYVQKMLYYKATDKSVAS*