Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047512.01.T01 | XP_003610187.1 | 96.543 | 376 | 12 | 1 | 1 | 376 | 1 | 375 | 0 | 750 |
| MsG0880047512.01.T02 | XP_003610187.1 | 96.543 | 376 | 12 | 1 | 1 | 376 | 1 | 375 | 0 | 750 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047512.01.T01 | Q9FHH8 | 52.699 | 389 | 137 | 10 | 1 | 376 | 1 | 355 | 4.72E-116 | 344 |
| MsG0880047512.01.T02 | Q9FHH8 | 52.699 | 389 | 137 | 10 | 1 | 376 | 1 | 355 | 4.72E-116 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047512.01.T02 | G7JD46 | 96.543 | 376 | 12 | 1 | 1 | 376 | 1 | 375 | 0.0 | 750 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049043.01 | MsG0880047512.01 | -0.803143 | 4.011662e-49 | 2.000719e-46 |
| MsG0180003324.01 | MsG0880047512.01 | 0.839836 | 1.248412e-57 | 1.745272e-54 |
| MsG0180004597.01 | MsG0880047512.01 | -0.817711 | 2.861501e-52 | 2.099588e-49 |
| MsG0180005856.01 | MsG0880047512.01 | 0.853996 | 1.651076e-61 | 3.634325e-58 |
| MsG0880043510.01 | MsG0880047512.01 | -0.808080 | 3.691625e-50 | 2.090974e-47 |
| MsG0280010825.01 | MsG0880047512.01 | -0.812626 | 3.857574e-51 | 2.464839e-48 |
| MsG0480019668.01 | MsG0880047512.01 | 0.800081 | 1.703352e-48 | 7.859780e-46 |
| MsG0480022296.01 | MsG0880047512.01 | 0.801774 | 7.682701e-49 | 3.700198e-46 |
| MsG0580026546.01 | MsG0880047512.01 | -0.830966 | 2.180888e-55 | 2.333741e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780036747.01 | MsG0880047512.01 | PPI |
| MsG0780036747.01 | MsG0880047512.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047512.01.T01 | MTR_4g128930 | 96.543 | 376 | 12 | 1 | 1 | 376 | 1 | 375 | 0.0 | 750 |
| MsG0880047512.01.T01 | MTR_1g013450 | 46.518 | 359 | 142 | 7 | 20 | 375 | 4 | 315 | 1.79e-99 | 298 |
| MsG0880047512.01.T01 | MTR_3g105710 | 49.444 | 360 | 104 | 11 | 20 | 375 | 4 | 289 | 3.01e-89 | 271 |
| MsG0880047512.01.T01 | MTR_7g018170 | 64.835 | 91 | 32 | 0 | 20 | 110 | 24 | 114 | 6.31e-39 | 143 |
| MsG0880047512.01.T01 | MTR_3g034680 | 79.487 | 78 | 16 | 0 | 67 | 144 | 12 | 89 | 1.15e-37 | 131 |
| MsG0880047512.01.T01 | MTR_1g023260 | 45.161 | 93 | 41 | 1 | 22 | 104 | 5 | 97 | 2.01e-20 | 88.6 |
| MsG0880047512.01.T01 | MTR_1g023260 | 45.161 | 93 | 41 | 1 | 22 | 104 | 5 | 97 | 2.39e-20 | 90.1 |
| MsG0880047512.01.T01 | MTR_5g069480 | 43.333 | 90 | 51 | 0 | 21 | 110 | 4 | 93 | 1.26e-18 | 87.0 |
| MsG0880047512.01.T01 | MTR_5g069480 | 43.333 | 90 | 51 | 0 | 21 | 110 | 4 | 93 | 1.43e-18 | 85.5 |
| MsG0880047512.01.T01 | MTR_4g067320 | 39.130 | 92 | 47 | 1 | 22 | 104 | 5 | 96 | 1.48e-16 | 78.6 |
| MsG0880047512.01.T01 | MTR_4g067320 | 39.130 | 92 | 47 | 1 | 22 | 104 | 5 | 96 | 1.50e-16 | 78.6 |
| MsG0880047512.01.T01 | MTR_3g117320 | 32.331 | 133 | 73 | 2 | 22 | 137 | 5 | 137 | 2.26e-16 | 77.8 |
| MsG0880047512.01.T01 | MTR_7g108150 | 39.326 | 89 | 53 | 1 | 22 | 110 | 20 | 107 | 2.61e-16 | 80.1 |
| MsG0880047512.01.T01 | MTR_5g021580 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 4.11e-16 | 76.3 |
| MsG0880047512.01.T01 | MTR_4g071200 | 40.860 | 93 | 45 | 1 | 22 | 104 | 5 | 97 | 4.24e-16 | 77.0 |
| MsG0880047512.01.T01 | MTR_5g021580 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 4.42e-16 | 76.3 |
| MsG0880047512.01.T01 | MTR_3g082630 | 38.889 | 90 | 54 | 1 | 21 | 110 | 4 | 92 | 6.73e-15 | 75.9 |
| MsG0880047512.01.T01 | MTR_2g099010 | 36.957 | 92 | 49 | 1 | 22 | 104 | 5 | 96 | 6.90e-15 | 73.9 |
| MsG0880047512.01.T01 | MTR_2g099010 | 36.957 | 92 | 49 | 1 | 22 | 104 | 5 | 96 | 6.94e-15 | 73.9 |
| MsG0880047512.01.T01 | MTR_2g073370 | 38.043 | 92 | 48 | 1 | 22 | 104 | 5 | 96 | 2.64e-14 | 73.2 |
| MsG0880047512.01.T01 | MTR_3g113070 | 36.170 | 94 | 49 | 1 | 22 | 104 | 5 | 98 | 1.02e-13 | 70.5 |
| MsG0880047512.01.T01 | MTR_8g104190 | 54.795 | 73 | 31 | 1 | 270 | 342 | 331 | 401 | 1.24e-13 | 72.0 |
| MsG0880047512.01.T01 | MTR_2g088900 | 39.024 | 82 | 50 | 0 | 21 | 102 | 100 | 181 | 1.08e-12 | 69.7 |
| MsG0880047512.01.T01 | MTR_1g110870 | 49.351 | 77 | 28 | 2 | 265 | 341 | 359 | 424 | 4.93e-12 | 67.4 |
| MsG0880047512.01.T01 | MTR_7g083540 | 40.541 | 74 | 44 | 0 | 22 | 95 | 5 | 78 | 8.96e-12 | 66.2 |
| MsG0880047512.01.T01 | MTR_5g072780 | 53.226 | 62 | 26 | 1 | 283 | 341 | 155 | 216 | 1.63e-11 | 63.9 |
| MsG0880047512.01.T01 | MTR_1g109350 | 34.146 | 82 | 54 | 0 | 20 | 101 | 3 | 84 | 7.92e-11 | 63.2 |
| MsG0880047512.01.T02 | MTR_4g128930 | 96.543 | 376 | 12 | 1 | 1 | 376 | 1 | 375 | 0.0 | 750 |
| MsG0880047512.01.T02 | MTR_1g013450 | 46.518 | 359 | 142 | 7 | 20 | 375 | 4 | 315 | 1.79e-99 | 298 |
| MsG0880047512.01.T02 | MTR_3g105710 | 49.444 | 360 | 104 | 11 | 20 | 375 | 4 | 289 | 3.01e-89 | 271 |
| MsG0880047512.01.T02 | MTR_7g018170 | 64.835 | 91 | 32 | 0 | 20 | 110 | 24 | 114 | 6.31e-39 | 143 |
| MsG0880047512.01.T02 | MTR_3g034680 | 79.487 | 78 | 16 | 0 | 67 | 144 | 12 | 89 | 1.15e-37 | 131 |
| MsG0880047512.01.T02 | MTR_1g023260 | 45.161 | 93 | 41 | 1 | 22 | 104 | 5 | 97 | 2.01e-20 | 88.6 |
| MsG0880047512.01.T02 | MTR_1g023260 | 45.161 | 93 | 41 | 1 | 22 | 104 | 5 | 97 | 2.39e-20 | 90.1 |
| MsG0880047512.01.T02 | MTR_5g069480 | 43.333 | 90 | 51 | 0 | 21 | 110 | 4 | 93 | 1.26e-18 | 87.0 |
| MsG0880047512.01.T02 | MTR_5g069480 | 43.333 | 90 | 51 | 0 | 21 | 110 | 4 | 93 | 1.43e-18 | 85.5 |
| MsG0880047512.01.T02 | MTR_4g067320 | 39.130 | 92 | 47 | 1 | 22 | 104 | 5 | 96 | 1.48e-16 | 78.6 |
| MsG0880047512.01.T02 | MTR_4g067320 | 39.130 | 92 | 47 | 1 | 22 | 104 | 5 | 96 | 1.50e-16 | 78.6 |
| MsG0880047512.01.T02 | MTR_3g117320 | 32.331 | 133 | 73 | 2 | 22 | 137 | 5 | 137 | 2.26e-16 | 77.8 |
| MsG0880047512.01.T02 | MTR_7g108150 | 39.326 | 89 | 53 | 1 | 22 | 110 | 20 | 107 | 2.61e-16 | 80.1 |
| MsG0880047512.01.T02 | MTR_5g021580 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 4.11e-16 | 76.3 |
| MsG0880047512.01.T02 | MTR_4g071200 | 40.860 | 93 | 45 | 1 | 22 | 104 | 5 | 97 | 4.24e-16 | 77.0 |
| MsG0880047512.01.T02 | MTR_5g021580 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 4.42e-16 | 76.3 |
| MsG0880047512.01.T02 | MTR_3g082630 | 38.889 | 90 | 54 | 1 | 21 | 110 | 4 | 92 | 6.73e-15 | 75.9 |
| MsG0880047512.01.T02 | MTR_2g099010 | 36.957 | 92 | 49 | 1 | 22 | 104 | 5 | 96 | 6.90e-15 | 73.9 |
| MsG0880047512.01.T02 | MTR_2g099010 | 36.957 | 92 | 49 | 1 | 22 | 104 | 5 | 96 | 6.94e-15 | 73.9 |
| MsG0880047512.01.T02 | MTR_2g073370 | 38.043 | 92 | 48 | 1 | 22 | 104 | 5 | 96 | 2.64e-14 | 73.2 |
| MsG0880047512.01.T02 | MTR_3g113070 | 36.170 | 94 | 49 | 1 | 22 | 104 | 5 | 98 | 1.02e-13 | 70.5 |
| MsG0880047512.01.T02 | MTR_8g104190 | 54.795 | 73 | 31 | 1 | 270 | 342 | 331 | 401 | 1.24e-13 | 72.0 |
| MsG0880047512.01.T02 | MTR_2g088900 | 39.024 | 82 | 50 | 0 | 21 | 102 | 100 | 181 | 1.08e-12 | 69.7 |
| MsG0880047512.01.T02 | MTR_1g110870 | 49.351 | 77 | 28 | 2 | 265 | 341 | 359 | 424 | 4.93e-12 | 67.4 |
| MsG0880047512.01.T02 | MTR_7g083540 | 40.541 | 74 | 44 | 0 | 22 | 95 | 5 | 78 | 8.96e-12 | 66.2 |
| MsG0880047512.01.T02 | MTR_5g072780 | 53.226 | 62 | 26 | 1 | 283 | 341 | 155 | 216 | 1.63e-11 | 63.9 |
| MsG0880047512.01.T02 | MTR_1g109350 | 34.146 | 82 | 54 | 0 | 20 | 101 | 3 | 84 | 7.92e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047512.01.T01 | AT5G57660 | 52.699 | 389 | 137 | 10 | 1 | 376 | 1 | 355 | 4.81e-117 | 344 |
| MsG0880047512.01.T01 | AT5G24930 | 48.974 | 390 | 135 | 12 | 20 | 376 | 4 | 362 | 1.78e-97 | 294 |
| MsG0880047512.01.T01 | AT2G24790 | 50.915 | 328 | 97 | 13 | 20 | 343 | 6 | 273 | 2.10e-92 | 279 |
| MsG0880047512.01.T01 | AT3G02380 | 39.782 | 367 | 178 | 11 | 20 | 376 | 14 | 347 | 4.33e-79 | 247 |
| MsG0880047512.01.T01 | AT5G15840 | 38.298 | 376 | 207 | 12 | 13 | 376 | 11 | 373 | 1.03e-76 | 241 |
| MsG0880047512.01.T01 | AT5G15850 | 39.257 | 377 | 189 | 8 | 13 | 376 | 6 | 355 | 3.79e-76 | 239 |
| MsG0880047512.01.T01 | AT2G24790 | 48.276 | 232 | 78 | 10 | 20 | 248 | 6 | 198 | 1.22e-56 | 185 |
| MsG0880047512.01.T01 | AT5G15840 | 34.649 | 228 | 138 | 6 | 13 | 229 | 11 | 238 | 1.23e-39 | 142 |
| MsG0880047512.01.T01 | AT1G49130 | 25.656 | 343 | 190 | 11 | 19 | 342 | 25 | 321 | 6.23e-19 | 87.0 |
| MsG0880047512.01.T01 | AT1G49130 | 25.656 | 343 | 190 | 11 | 19 | 342 | 18 | 314 | 6.82e-19 | 87.0 |
| MsG0880047512.01.T01 | AT2G33500 | 44.944 | 89 | 49 | 0 | 22 | 110 | 12 | 100 | 3.95e-18 | 85.5 |
| MsG0880047512.01.T01 | AT2G33500 | 44.944 | 89 | 49 | 0 | 22 | 110 | 12 | 100 | 4.17e-18 | 85.5 |
| MsG0880047512.01.T01 | AT1G28050 | 43.820 | 89 | 50 | 0 | 22 | 110 | 9 | 97 | 3.68e-17 | 82.8 |
| MsG0880047512.01.T01 | AT2G21320 | 40.449 | 89 | 45 | 1 | 21 | 101 | 4 | 92 | 1.72e-16 | 77.0 |
| MsG0880047512.01.T01 | AT1G75540 | 36.434 | 129 | 68 | 2 | 22 | 136 | 5 | 133 | 1.80e-16 | 80.1 |
| MsG0880047512.01.T01 | AT2G47890 | 38.462 | 91 | 54 | 1 | 20 | 110 | 11 | 99 | 5.65e-16 | 77.0 |
| MsG0880047512.01.T01 | AT1G06040 | 40.217 | 92 | 46 | 1 | 22 | 104 | 5 | 96 | 5.66e-16 | 77.4 |
| MsG0880047512.01.T01 | AT4G38960 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 6.03e-16 | 75.9 |
| MsG0880047512.01.T01 | AT4G38960 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 6.03e-16 | 75.9 |
| MsG0880047512.01.T01 | AT2G47890 | 38.462 | 91 | 54 | 1 | 20 | 110 | 11 | 99 | 7.05e-16 | 77.8 |
| MsG0880047512.01.T01 | AT2G47890 | 38.462 | 91 | 54 | 1 | 20 | 110 | 11 | 99 | 8.21e-16 | 78.2 |
| MsG0880047512.01.T01 | AT1G06040 | 40.217 | 92 | 46 | 1 | 22 | 104 | 5 | 96 | 9.66e-16 | 75.1 |
| MsG0880047512.01.T01 | AT5G48250 | 46.575 | 73 | 39 | 0 | 21 | 93 | 4 | 76 | 2.00e-15 | 77.4 |
| MsG0880047512.01.T01 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T01 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T01 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T01 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T01 | AT2G31380 | 36.036 | 111 | 57 | 2 | 22 | 123 | 5 | 110 | 5.89e-15 | 74.3 |
| MsG0880047512.01.T01 | AT4G15250 | 39.560 | 91 | 53 | 1 | 22 | 112 | 5 | 93 | 1.28e-14 | 74.7 |
| MsG0880047512.01.T01 | AT1G78600 | 38.043 | 92 | 48 | 1 | 22 | 104 | 5 | 96 | 1.92e-14 | 73.6 |
| MsG0880047512.01.T01 | AT1G78600 | 38.043 | 92 | 48 | 1 | 22 | 104 | 5 | 96 | 2.31e-14 | 73.6 |
| MsG0880047512.01.T01 | AT3G21880 | 40.000 | 95 | 54 | 2 | 16 | 110 | 4 | 95 | 9.05e-14 | 72.4 |
| MsG0880047512.01.T01 | AT3G21880 | 40.000 | 95 | 54 | 2 | 16 | 110 | 4 | 95 | 9.05e-14 | 72.4 |
| MsG0880047512.01.T01 | AT1G73870 | 52.000 | 75 | 31 | 2 | 272 | 344 | 319 | 390 | 1.06e-13 | 72.4 |
| MsG0880047512.01.T01 | AT3G21880 | 39.326 | 89 | 52 | 1 | 22 | 110 | 5 | 91 | 1.65e-13 | 71.6 |
| MsG0880047512.01.T01 | AT1G68190 | 36.585 | 82 | 52 | 0 | 20 | 101 | 41 | 122 | 2.96e-12 | 67.8 |
| MsG0880047512.01.T01 | AT1G68190 | 36.585 | 82 | 52 | 0 | 20 | 101 | 12 | 93 | 3.08e-12 | 67.8 |
| MsG0880047512.01.T01 | AT1G68190 | 36.585 | 82 | 52 | 0 | 20 | 101 | 12 | 93 | 3.08e-12 | 67.8 |
| MsG0880047512.01.T01 | AT4G39070 | 32.500 | 120 | 71 | 1 | 22 | 131 | 5 | 124 | 9.48e-12 | 65.1 |
| MsG0880047512.01.T01 | AT1G68520 | 67.391 | 46 | 15 | 0 | 299 | 344 | 357 | 402 | 1.66e-11 | 65.9 |
| MsG0880047512.01.T01 | AT4G10240 | 28.767 | 146 | 82 | 3 | 22 | 149 | 5 | 146 | 3.49e-11 | 61.6 |
| MsG0880047512.01.T01 | AT1G25440 | 51.389 | 72 | 30 | 2 | 275 | 341 | 332 | 403 | 4.03e-11 | 64.7 |
| MsG0880047512.01.T02 | AT5G57660 | 52.699 | 389 | 137 | 10 | 1 | 376 | 1 | 355 | 4.81e-117 | 344 |
| MsG0880047512.01.T02 | AT5G24930 | 48.974 | 390 | 135 | 12 | 20 | 376 | 4 | 362 | 1.78e-97 | 294 |
| MsG0880047512.01.T02 | AT2G24790 | 50.915 | 328 | 97 | 13 | 20 | 343 | 6 | 273 | 2.10e-92 | 279 |
| MsG0880047512.01.T02 | AT3G02380 | 39.782 | 367 | 178 | 11 | 20 | 376 | 14 | 347 | 4.33e-79 | 247 |
| MsG0880047512.01.T02 | AT5G15840 | 38.298 | 376 | 207 | 12 | 13 | 376 | 11 | 373 | 1.03e-76 | 241 |
| MsG0880047512.01.T02 | AT5G15850 | 39.257 | 377 | 189 | 8 | 13 | 376 | 6 | 355 | 3.79e-76 | 239 |
| MsG0880047512.01.T02 | AT2G24790 | 48.276 | 232 | 78 | 10 | 20 | 248 | 6 | 198 | 1.22e-56 | 185 |
| MsG0880047512.01.T02 | AT5G15840 | 34.649 | 228 | 138 | 6 | 13 | 229 | 11 | 238 | 1.23e-39 | 142 |
| MsG0880047512.01.T02 | AT1G49130 | 25.656 | 343 | 190 | 11 | 19 | 342 | 25 | 321 | 6.23e-19 | 87.0 |
| MsG0880047512.01.T02 | AT1G49130 | 25.656 | 343 | 190 | 11 | 19 | 342 | 18 | 314 | 6.82e-19 | 87.0 |
| MsG0880047512.01.T02 | AT2G33500 | 44.944 | 89 | 49 | 0 | 22 | 110 | 12 | 100 | 3.95e-18 | 85.5 |
| MsG0880047512.01.T02 | AT2G33500 | 44.944 | 89 | 49 | 0 | 22 | 110 | 12 | 100 | 4.17e-18 | 85.5 |
| MsG0880047512.01.T02 | AT1G28050 | 43.820 | 89 | 50 | 0 | 22 | 110 | 9 | 97 | 3.68e-17 | 82.8 |
| MsG0880047512.01.T02 | AT2G21320 | 40.449 | 89 | 45 | 1 | 21 | 101 | 4 | 92 | 1.72e-16 | 77.0 |
| MsG0880047512.01.T02 | AT1G75540 | 36.434 | 129 | 68 | 2 | 22 | 136 | 5 | 133 | 1.80e-16 | 80.1 |
| MsG0880047512.01.T02 | AT2G47890 | 38.462 | 91 | 54 | 1 | 20 | 110 | 11 | 99 | 5.65e-16 | 77.0 |
| MsG0880047512.01.T02 | AT1G06040 | 40.217 | 92 | 46 | 1 | 22 | 104 | 5 | 96 | 5.66e-16 | 77.4 |
| MsG0880047512.01.T02 | AT4G38960 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 6.03e-16 | 75.9 |
| MsG0880047512.01.T02 | AT4G38960 | 43.210 | 81 | 38 | 1 | 21 | 93 | 4 | 84 | 6.03e-16 | 75.9 |
| MsG0880047512.01.T02 | AT2G47890 | 38.462 | 91 | 54 | 1 | 20 | 110 | 11 | 99 | 7.05e-16 | 77.8 |
| MsG0880047512.01.T02 | AT2G47890 | 38.462 | 91 | 54 | 1 | 20 | 110 | 11 | 99 | 8.21e-16 | 78.2 |
| MsG0880047512.01.T02 | AT1G06040 | 40.217 | 92 | 46 | 1 | 22 | 104 | 5 | 96 | 9.66e-16 | 75.1 |
| MsG0880047512.01.T02 | AT5G48250 | 46.575 | 73 | 39 | 0 | 21 | 93 | 4 | 76 | 2.00e-15 | 77.4 |
| MsG0880047512.01.T02 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T02 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T02 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T02 | AT3G07650 | 45.205 | 73 | 40 | 0 | 21 | 93 | 4 | 76 | 3.53e-15 | 76.6 |
| MsG0880047512.01.T02 | AT2G31380 | 36.036 | 111 | 57 | 2 | 22 | 123 | 5 | 110 | 5.89e-15 | 74.3 |
| MsG0880047512.01.T02 | AT4G15250 | 39.560 | 91 | 53 | 1 | 22 | 112 | 5 | 93 | 1.28e-14 | 74.7 |
| MsG0880047512.01.T02 | AT1G78600 | 38.043 | 92 | 48 | 1 | 22 | 104 | 5 | 96 | 1.92e-14 | 73.6 |
| MsG0880047512.01.T02 | AT1G78600 | 38.043 | 92 | 48 | 1 | 22 | 104 | 5 | 96 | 2.31e-14 | 73.6 |
| MsG0880047512.01.T02 | AT3G21880 | 40.000 | 95 | 54 | 2 | 16 | 110 | 4 | 95 | 9.05e-14 | 72.4 |
| MsG0880047512.01.T02 | AT3G21880 | 40.000 | 95 | 54 | 2 | 16 | 110 | 4 | 95 | 9.05e-14 | 72.4 |
| MsG0880047512.01.T02 | AT1G73870 | 52.000 | 75 | 31 | 2 | 272 | 344 | 319 | 390 | 1.06e-13 | 72.4 |
| MsG0880047512.01.T02 | AT3G21880 | 39.326 | 89 | 52 | 1 | 22 | 110 | 5 | 91 | 1.65e-13 | 71.6 |
| MsG0880047512.01.T02 | AT1G68190 | 36.585 | 82 | 52 | 0 | 20 | 101 | 41 | 122 | 2.96e-12 | 67.8 |
| MsG0880047512.01.T02 | AT1G68190 | 36.585 | 82 | 52 | 0 | 20 | 101 | 12 | 93 | 3.08e-12 | 67.8 |
| MsG0880047512.01.T02 | AT1G68190 | 36.585 | 82 | 52 | 0 | 20 | 101 | 12 | 93 | 3.08e-12 | 67.8 |
| MsG0880047512.01.T02 | AT4G39070 | 32.500 | 120 | 71 | 1 | 22 | 131 | 5 | 124 | 9.48e-12 | 65.1 |
| MsG0880047512.01.T02 | AT1G68520 | 67.391 | 46 | 15 | 0 | 299 | 344 | 357 | 402 | 1.66e-11 | 65.9 |
| MsG0880047512.01.T02 | AT4G10240 | 28.767 | 146 | 82 | 3 | 22 | 149 | 5 | 146 | 3.49e-11 | 61.6 |
| MsG0880047512.01.T02 | AT1G25440 | 51.389 | 72 | 30 | 2 | 275 | 341 | 332 | 403 | 4.03e-11 | 64.7 |
Find 72 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATCGGAATCGATGGTTTC+AGG | 0.197771 | 8:+87329282 | MsG0880047512.01.T02:CDS |
| GCGAACCGGCCTTTAATTCT+AGG | 0.209256 | 8:-87329462 | None:intergenic |
| TCAGAGATATCATACAATTT+TGG | 0.229801 | 8:+87329261 | MsG0880047512.01.T02:CDS |
| AGTGGTGAATTTGTTAGATT+TGG | 0.277983 | 8:+87329891 | MsG0880047512.01.T02:three_prime_UTR |
| TTAAAGAAAGGAGAACTTTA+CGG | 0.307730 | 8:+87330022 | MsG0880047512.01.T02:three_prime_UTR |
| GTCCACATCCGAGTCAATTT+CGG | 0.307960 | 8:-87329493 | None:intergenic |
| GGAGAACTTTACGGGACTTT+TGG | 0.316406 | 8:+87330031 | MsG0880047512.01.T02:three_prime_UTR |
| GAAACCCGGCCTAGAATTAA+AGG | 0.334745 | 8:+87329453 | MsG0880047512.01.T02:CDS |
| TTTGGTTGATAGTATTAATC+TGG | 0.339570 | 8:+87330049 | MsG0880047512.01.T02:three_prime_UTR |
| ATCTGTATCCCCATTCCTAT+TGG | 0.357942 | 8:+87330184 | MsG0880047512.01.T02:three_prime_UTR |
| TAAAGAAAGGAGAACTTTAC+GGG | 0.370392 | 8:+87330023 | MsG0880047512.01.T02:three_prime_UTR |
| TTGGCGCGGTTGTACGGTAT+GGG | 0.377403 | 8:+87329910 | MsG0880047512.01.T02:three_prime_UTR |
| ACTTGAATTGAAGATTTGTC+TGG | 0.402334 | 8:+87329968 | MsG0880047512.01.T02:three_prime_UTR |
| TTTCGGTTCGTTTAGCGAAC+CGG | 0.407227 | 8:-87329476 | None:intergenic |
| TTGCTCCTTGCACCATCCCT+TGG | 0.426586 | 8:-87329320 | None:intergenic |
| GATCGGAATCGATGGTTTCA+GGG | 0.428883 | 8:+87329283 | MsG0880047512.01.T02:CDS |
| AGTTCCTTCATCTATGCTAA+TGG | 0.433285 | 8:+87329545 | MsG0880047512.01.T02:CDS |
| TCAGTCGATTTCTTACCAAC+TGG | 0.434072 | 8:+87329819 | MsG0880047512.01.T02:three_prime_UTR |
| TCTGACACCGTGTTTGCATC+TGG | 0.435148 | 8:-87329243 | None:intergenic |
| TTTGGCGCGGTTGTACGGTA+TGG | 0.437776 | 8:+87329909 | MsG0880047512.01.T02:three_prime_UTR |
| ACACATTGAAACCATGGTAT+AGG | 0.446939 | 8:-87329635 | None:intergenic |
| TTAGATTTGGCGCGGTTGTA+CGG | 0.448042 | 8:+87329904 | MsG0880047512.01.T02:three_prime_UTR |
| TATCCCCATTCCTATTGGAT+GGG | 0.456584 | 8:+87330189 | MsG0880047512.01.T02:three_prime_UTR |
| GCACCCCATCCAATAGGAAT+GGG | 0.458086 | 8:-87330193 | None:intergenic |
| GTATCCCCATTCCTATTGGA+TGG | 0.463059 | 8:+87330188 | MsG0880047512.01.T02:three_prime_UTR |
| TGTCTCTGATCTTGATCTGA+GGG | 0.465071 | 8:-87329754 | None:intergenic |
| TGGCGCGGTTGTACGGTATG+GGG | 0.469487 | 8:+87329911 | MsG0880047512.01.T02:three_prime_UTR |
| AAAGTGGGAACGACGCCGTA+TGG | 0.475583 | 8:-87329573 | None:intergenic |
| GGAGTGGCACCCCATCCAAT+AGG | 0.476032 | 8:-87330199 | None:intergenic |
| AACCGAAATTGACTCGGATG+TGG | 0.481901 | 8:+87329491 | MsG0880047512.01.T02:CDS |
| CCGGCCTTTAATTCTAGGCC+GGG | 0.498099 | 8:-87329457 | None:intergenic |
| ATTATTATTAGGATGAAAAG+TGG | 0.498800 | 8:+87329873 | MsG0880047512.01.T02:three_prime_UTR |
| ACCGGCCTTTAATTCTAGGC+CGG | 0.502804 | 8:-87329458 | None:intergenic |
| GGAACTGCGAGAGGATCAGC+AGG | 0.506955 | 8:-87329528 | None:intergenic |
| TTGTCTCTGATCTTGATCTG+AGG | 0.511866 | 8:-87329755 | None:intergenic |
| AGCAACACAATTATGTGGAA+TGG | 0.513777 | 8:+87329338 | MsG0880047512.01.T02:CDS |
| TACAGATACAGCTTGAGAAA+AGG | 0.522004 | 8:-87330220 | None:intergenic |
| ATTAAAACAGTTGATCCAGT+TGG | 0.525383 | 8:-87329834 | None:intergenic |
| GGCACCCCATCCAATAGGAA+TGG | 0.527469 | 8:-87330194 | None:intergenic |
| ATGCTAATGGACTGTCCATA+CGG | 0.541142 | 8:+87329558 | MsG0880047512.01.T02:CDS |
| ATCCCCATTCCTATTGGATG+GGG | 0.548830 | 8:+87330190 | MsG0880047512.01.T02:three_prime_UTR |
| TTTCTAATGGGATCAGATCA+CGG | 0.558451 | 8:+87330155 | MsG0880047512.01.T02:three_prime_UTR |
| GGCGCGGTTGTACGGTATGG+GGG | 0.562048 | 8:+87329912 | MsG0880047512.01.T02:three_prime_UTR |
| TTATGAGGTACAGAGAGAAG+AGG | 0.563746 | 8:+87329376 | MsG0880047512.01.T02:CDS |
| TTACACATCGCGCACTAATG+AGG | 0.564234 | 8:+87329790 | MsG0880047512.01.T02:three_prime_UTR |
| ATCGGAATCGATGGTTTCAG+GGG | 0.573412 | 8:+87329284 | MsG0880047512.01.T02:CDS |
| GATTAGTGATGATGATTCTG+TGG | 0.575368 | 8:+87329673 | MsG0880047512.01.T02:three_prime_UTR |
| CAGTCCATTAGCATAGATGA+AGG | 0.582055 | 8:-87329549 | None:intergenic |
| ATTCTAACACATTGAAACCA+TGG | 0.582224 | 8:-87329641 | None:intergenic |
| TGGAATGGATCGTGAAGCGA+GGG | 0.592479 | 8:+87329353 | MsG0880047512.01.T02:CDS |
| CAAGGAGCAACACAATTATG+TGG | 0.592806 | 8:+87329333 | MsG0880047512.01.T02:CDS |
| GATCAGCAGGGTTATAGAGA+CGG | 0.597767 | 8:-87329515 | None:intergenic |
| AGTAACCAAGGGATGGTGCA+AGG | 0.600112 | 8:+87329315 | MsG0880047512.01.T02:CDS |
| ATCGTGAAGCGAGGGTTATG+AGG | 0.603818 | 8:+87329361 | MsG0880047512.01.T02:CDS |
| CCCGGCCTAGAATTAAAGGC+CGG | 0.612766 | 8:+87329457 | MsG0880047512.01.T02:CDS |
| ATCTTCACTTGACGTAGGAG+TGG | 0.622983 | 8:+87329218 | MsG0880047512.01.T02:CDS |
| TCGTCATCTTCACTTGACGT+AGG | 0.628545 | 8:+87329213 | MsG0880047512.01.T02:CDS |
| GAAAAGCTTATGCAGAAACC+CGG | 0.633617 | 8:+87329439 | MsG0880047512.01.T02:CDS |
| GTGGAATGGATCGTGAAGCG+AGG | 0.634097 | 8:+87329352 | MsG0880047512.01.T02:CDS |
| TGTGAATAGTAACCAAGGGA+TGG | 0.646742 | 8:+87329308 | MsG0880047512.01.T02:CDS |
| AGTGGTGCCAGATGCAAACA+CGG | 0.653433 | 8:+87329236 | MsG0880047512.01.T02:CDS |
| ATAGATGAAGGAACTGCGAG+AGG | 0.656412 | 8:-87329537 | None:intergenic |
| TAAACGAACCGAAATTGACT+CGG | 0.658214 | 8:+87329485 | MsG0880047512.01.T02:CDS |
| ATTAGTGATGATGATTCTGT+GGG | 0.668921 | 8:+87329674 | MsG0880047512.01.T02:three_prime_UTR |
| CACCCCATCCAATAGGAATG+GGG | 0.670692 | 8:-87330192 | None:intergenic |
| AGTATGAATCTCCTATACCA+TGG | 0.679029 | 8:+87329624 | MsG0880047512.01.T02:three_prime_UTR |
| TGAATTTGTTAGATTTGGCG+CGG | 0.681844 | 8:+87329896 | MsG0880047512.01.T02:three_prime_UTR |
| GGGGTGTGAATAGTAACCAA+GGG | 0.682316 | 8:+87329304 | MsG0880047512.01.T02:CDS |
| AAACAAGGTCAGGATAACAG+AGG | 0.687745 | 8:+87329601 | MsG0880047512.01.T02:three_prime_UTR |
| ATACAGCTTGAGAAAAGGAG+TGG | 0.688833 | 8:-87330215 | None:intergenic |
| TCGGAATCGATGGTTTCAGG+GGG | 0.701775 | 8:+87329285 | MsG0880047512.01.T02:CDS |
| GAACTGCGAGAGGATCAGCA+GGG | 0.795439 | 8:-87329527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAACAAAATAATCAAA+CGG | - | Chr8:87329702-87329721 | None:intergenic | 10.0% |
| !! | TTAATCAATTAATAATGATT+TGG | + | Chr8:87329173-87329192 | MsG0880047512.01.T02:intron | 10.0% |
| !! | ATTATTATTAGGATGAAAAG+TGG | + | Chr8:87329873-87329892 | MsG0880047512.01.T02:three_prime_UTR | 20.0% |
| !! | TAACAAGCAAAAGTAAAAAA+CGG | - | Chr8:87330005-87330024 | None:intergenic | 20.0% |
| !! | TTAATTAATTACTTACGCTA+TGG | - | Chr8:87329105-87329124 | None:intergenic | 20.0% |
| ! | AACAAGCAAAAGTAAAAAAC+GGG | - | Chr8:87330004-87330023 | None:intergenic | 25.0% |
| ! | AGCATAACATAACATAAGAT+GGG | + | Chr8:87328350-87328369 | MsG0880047512.01.T02:intron | 25.0% |
| ! | CTTCAGAAAAAAGAAAAACA+CGG | - | Chr8:87330247-87330266 | None:intergenic | 25.0% |
| ! | GAGTAATCAAAATCAAGAAA+TGG | - | Chr8:87328908-87328927 | None:intergenic | 25.0% |
| ! | TAGCATAACATAACATAAGA+TGG | + | Chr8:87328349-87328368 | MsG0880047512.01.T02:intron | 25.0% |
| ! | TTAAAGAAAGGAGAACTTTA+CGG | + | Chr8:87330022-87330041 | MsG0880047512.01.T02:three_prime_UTR | 25.0% |
| ! | TTGTTTGAATGAATTTGAGT+TGG | - | Chr8:87328256-87328275 | None:intergenic | 25.0% |
| !! | GATATCATACAATTTTGGAT+CGG | + | Chr8:87329266-87329285 | MsG0880047512.01.T02:CDS | 25.0% |
| !! | TCAGAGATATCATACAATTT+TGG | + | Chr8:87329261-87329280 | MsG0880047512.01.T02:CDS | 25.0% |
| !! | TGTTTGAATGAATTTGAGTT+GGG | - | Chr8:87328255-87328274 | None:intergenic | 25.0% |
| !!! | AAGAAAGTGTCTTTTTCTAA+TGG | + | Chr8:87330142-87330161 | MsG0880047512.01.T02:three_prime_UTR | 25.0% |
| !!! | AGAAAGTGTCTTTTTCTAAT+GGG | + | Chr8:87330143-87330162 | MsG0880047512.01.T02:three_prime_UTR | 25.0% |
| !!! | TACTTTTGCTTGTTAAAGAA+AGG | + | Chr8:87330010-87330029 | MsG0880047512.01.T02:three_prime_UTR | 25.0% |
| !!! | TTTGGTTGATAGTATTAATC+TGG | + | Chr8:87330049-87330068 | MsG0880047512.01.T02:three_prime_UTR | 25.0% |
| ACTTGAATTGAAGATTTGTC+TGG | + | Chr8:87329968-87329987 | MsG0880047512.01.T02:three_prime_UTR | 30.0% | |
| ATAAGCGATTTCATTAGTAG+TGG | + | Chr8:87328326-87328345 | MsG0880047512.01.T02:five_prime_UTR | 30.0% | |
| ATGATGAATCATAACTCAGA+AGG | + | Chr8:87329013-87329032 | MsG0880047512.01.T02:CDS | 30.0% | |
| ATTAAAACAGTTGATCCAGT+TGG | - | Chr8:87329837-87329856 | None:intergenic | 30.0% | |
| ATTCTAACACATTGAAACCA+TGG | - | Chr8:87329644-87329663 | None:intergenic | 30.0% | |
| GCTTCTTAGCTTATTTGAAT+GGG | - | Chr8:87328288-87328307 | None:intergenic | 30.0% | |
| TAAAGAAAGGAGAACTTTAC+GGG | + | Chr8:87330023-87330042 | MsG0880047512.01.T02:three_prime_UTR | 30.0% | |
| ! | ATCTAGAGTTTCATTGAGTT+TGG | - | Chr8:87328849-87328868 | None:intergenic | 30.0% |
| ! | ATTAGTGATGATGATTCTGT+GGG | + | Chr8:87329674-87329693 | MsG0880047512.01.T02:three_prime_UTR | 30.0% |
| ! | GAATAGTCTTCTCGAATTTT+CGG | - | Chr8:87329407-87329426 | None:intergenic | 30.0% |
| ! | GACCTTGTTTACTAAAAAGT+GGG | - | Chr8:87329591-87329610 | None:intergenic | 30.0% |
| ! | GTGAGTTTGATGATTTCTTA+GGG | - | Chr8:87328233-87328252 | None:intergenic | 30.0% |
| ! | TGACCTTGTTTACTAAAAAG+TGG | - | Chr8:87329592-87329611 | None:intergenic | 30.0% |
| !! | ACTTTTTAGTAAACAAGGTC+AGG | + | Chr8:87329591-87329610 | MsG0880047512.01.T02:exon | 30.0% |
| !! | AGTGGTGAATTTGTTAGATT+TGG | + | Chr8:87329891-87329910 | MsG0880047512.01.T02:three_prime_UTR | 30.0% |
| !! | TGATTTGGTTTGTTATTAGC+AGG | + | Chr8:87329188-87329207 | MsG0880047512.01.T02:intron | 30.0% |
| !!! | TTCCCACTTTTTAGTAAACA+AGG | + | Chr8:87329586-87329605 | MsG0880047512.01.T02:exon | 30.0% |
| AACAACGAAATTGAAAGACG+CGG | - | Chr8:87328753-87328772 | None:intergenic | 35.0% | |
| ACACATTGAAACCATGGTAT+AGG | - | Chr8:87329638-87329657 | None:intergenic | 35.0% | |
| AGAGATGTTCTTCTCTGATA+TGG | + | Chr8:87328880-87328899 | MsG0880047512.01.T02:CDS | 35.0% | |
| AGCAACACAATTATGTGGAA+TGG | + | Chr8:87329338-87329357 | MsG0880047512.01.T02:CDS | 35.0% | |
| AGTATGAATCTCCTATACCA+TGG | + | Chr8:87329624-87329643 | MsG0880047512.01.T02:three_prime_UTR | 35.0% | |
| AGTTCCTTCATCTATGCTAA+TGG | + | Chr8:87329545-87329564 | MsG0880047512.01.T02:CDS | 35.0% | |
| ATAGAAACGCAGAATCAGAA+CGG | - | Chr8:87328472-87328491 | None:intergenic | 35.0% | |
| ATTACTTACGCTATGGCTAA+TGG | - | Chr8:87329098-87329117 | None:intergenic | 35.0% | |
| CGCTTCTTAGCTTATTTGAA+TGG | - | Chr8:87328289-87328308 | None:intergenic | 35.0% | |
| CTGATTCCGAATCCTAATTT+CGG | + | Chr8:87328821-87328840 | MsG0880047512.01.T02:CDS | 35.0% | |
| TAAACGAACCGAAATTGACT+CGG | + | Chr8:87329485-87329504 | MsG0880047512.01.T02:CDS | 35.0% | |
| TACAGATACAGCTTGAGAAA+AGG | - | Chr8:87330223-87330242 | None:intergenic | 35.0% | |
| TCTTAGCTTATTTGAATGGG+AGG | - | Chr8:87328285-87328304 | None:intergenic | 35.0% | |
| TGGTGCAGTTATTATTGTTC+TGG | - | Chr8:87328940-87328959 | None:intergenic | 35.0% | |
| TTGAGTTTGGATCCGAAATT+AGG | - | Chr8:87328836-87328855 | None:intergenic | 35.0% | |
| TTGCAAGAATCACATAGCTT+AGG | - | Chr8:87328425-87328444 | None:intergenic | 35.0% | |
| TTGGATCCGAAATTAGGATT+CGG | - | Chr8:87328830-87328849 | None:intergenic | 35.0% | |
| TTTCTAATGGGATCAGATCA+CGG | + | Chr8:87330155-87330174 | MsG0880047512.01.T02:three_prime_UTR | 35.0% | |
| ! | GATTAGTGATGATGATTCTG+TGG | + | Chr8:87329673-87329692 | MsG0880047512.01.T02:three_prime_UTR | 35.0% |
| ! | GGTGAGTTTGATGATTTCTT+AGG | - | Chr8:87328234-87328253 | None:intergenic | 35.0% |
| ! | TTTGATGATTTCTTAGGGTG+CGG | - | Chr8:87328228-87328247 | None:intergenic | 35.0% |
| !! | CATAAGATGGGTATTGAAAG+AGG | + | Chr8:87328362-87328381 | MsG0880047512.01.T02:intron | 35.0% |
| !! | GGAATGTGATGGATAGTTAA+AGG | - | Chr8:87329077-87329096 | None:intergenic | 35.0% |
| !! | TGAATTTGTTAGATTTGGCG+CGG | + | Chr8:87329896-87329915 | MsG0880047512.01.T02:three_prime_UTR | 35.0% |
| AAACAAGGTCAGGATAACAG+AGG | + | Chr8:87329601-87329620 | MsG0880047512.01.T02:three_prime_UTR | 40.0% | |
| ATACAGCTTGAGAAAAGGAG+TGG | - | Chr8:87330218-87330237 | None:intergenic | 40.0% | |
| ATCTGTATCCCCATTCCTAT+TGG | + | Chr8:87330184-87330203 | MsG0880047512.01.T02:three_prime_UTR | 40.0% | |
| CAAGAATCACATAGCTTAGG+TGG | - | Chr8:87328422-87328441 | None:intergenic | 40.0% | |
| CAAGGAGCAACACAATTATG+TGG | + | Chr8:87329333-87329352 | MsG0880047512.01.T02:CDS | 40.0% | |
| CAGTCCATTAGCATAGATGA+AGG | - | Chr8:87329552-87329571 | None:intergenic | 40.0% | |
| CTATGGCTAATGGAATGTGA+TGG | - | Chr8:87329088-87329107 | None:intergenic | 40.0% | |
| GAAAAGCTTATGCAGAAACC+CGG | + | Chr8:87329439-87329458 | MsG0880047512.01.T02:CDS | 40.0% | |
| TATCCCCATTCCTATTGGAT+GGG | + | Chr8:87330189-87330208 | MsG0880047512.01.T02:three_prime_UTR | 40.0% | |
| TGTCTCTGATCTTGATCTGA+GGG | - | Chr8:87329757-87329776 | None:intergenic | 40.0% | |
| TGTGAATAGTAACCAAGGGA+TGG | + | Chr8:87329308-87329327 | MsG0880047512.01.T02:CDS | 40.0% | |
| TTATGAGGTACAGAGAGAAG+AGG | + | Chr8:87329376-87329395 | MsG0880047512.01.T02:CDS | 40.0% | |
| TTGTCTCTGATCTTGATCTG+AGG | - | Chr8:87329758-87329777 | None:intergenic | 40.0% | |
| TTTGTTAGCAGAGTGAATGG+TGG | - | Chr8:87328510-87328529 | None:intergenic | 40.0% | |
| ! | AAGAGCATGGTGAAAAAGCT+TGG | + | Chr8:87329941-87329960 | MsG0880047512.01.T02:three_prime_UTR | 40.0% |
| ! | CAATTTTGGATCGGAATCGA+TGG | + | Chr8:87329275-87329294 | MsG0880047512.01.T02:CDS | 40.0% |
| ! | GGACTAAAGAGTTTTCGAAG+CGG | + | Chr8:87328386-87328405 | MsG0880047512.01.T02:CDS | 40.0% |
| ! | TCAGTCGATTTCTTACCAAC+TGG | + | Chr8:87329819-87329838 | MsG0880047512.01.T02:three_prime_UTR | 40.0% |
| !! | AAGATGGGTATTGAAAGAGG+AGG | + | Chr8:87328365-87328384 | MsG0880047512.01.T02:intron | 40.0% |
| !! | ATGCTAATGGACTGTCCATA+CGG | + | Chr8:87329558-87329577 | MsG0880047512.01.T02:CDS | 40.0% |
| !! | GAGTTTGTTAGCAGAGTGAA+TGG | - | Chr8:87328513-87328532 | None:intergenic | 40.0% |
| !! | GGAGTAGGTTTAGTTTGAAC+AGG | - | Chr8:87328986-87329005 | None:intergenic | 40.0% |
| AAACTAAACCTACTCCAGCG+CGG | + | Chr8:87328990-87329009 | MsG0880047512.01.T02:CDS | 45.0% | |
| AGGAACAACGCTATCGTTCA+TGG | - | Chr8:87328966-87328985 | None:intergenic | 45.0% | |
| ATAGATGAAGGAACTGCGAG+AGG | - | Chr8:87329540-87329559 | None:intergenic | 45.0% | |
| ATCAGAACGGCAAAAAAGCG+CGG | - | Chr8:87328459-87328478 | None:intergenic | 45.0% | |
| ATCCCCATTCCTATTGGATG+GGG | + | Chr8:87330190-87330209 | MsG0880047512.01.T02:three_prime_UTR | 45.0% | |
| ATCGGAATCGATGGTTTCAG+GGG | + | Chr8:87329284-87329303 | MsG0880047512.01.T02:CDS | 45.0% | |
| ATCTTCACTTGACGTAGGAG+TGG | + | Chr8:87329218-87329237 | MsG0880047512.01.T02:CDS | 45.0% | |
| GAAACCCGGCCTAGAATTAA+AGG | + | Chr8:87329453-87329472 | MsG0880047512.01.T02:CDS | 45.0% | |
| GATCAGCAGGGTTATAGAGA+CGG | - | Chr8:87329518-87329537 | None:intergenic | 45.0% | |
| GATCGGAATCGATGGTTTCA+GGG | + | Chr8:87329283-87329302 | MsG0880047512.01.T02:CDS | 45.0% | |
| GATTCAGCGGAGTCAAAGAA+AGG | - | Chr8:87328695-87328714 | None:intergenic | 45.0% | |
| GGGGTGTGAATAGTAACCAA+GGG | + | Chr8:87329304-87329323 | MsG0880047512.01.T02:CDS | 45.0% | |
| GTATCCCCATTCCTATTGGA+TGG | + | Chr8:87330188-87330207 | MsG0880047512.01.T02:three_prime_UTR | 45.0% | |
| GTCCACATCCGAGTCAATTT+CGG | - | Chr8:87329496-87329515 | None:intergenic | 45.0% | |
| TCGTCATCTTCACTTGACGT+AGG | + | Chr8:87329213-87329232 | MsG0880047512.01.T02:CDS | 45.0% | |
| TTACACATCGCGCACTAATG+AGG | + | Chr8:87329790-87329809 | MsG0880047512.01.T02:three_prime_UTR | 45.0% | |
| TTAGATTTGGCGCGGTTGTA+CGG | + | Chr8:87329904-87329923 | MsG0880047512.01.T02:three_prime_UTR | 45.0% | |
| TTATGATTCATCATCCGCGC+TGG | - | Chr8:87329007-87329026 | None:intergenic | 45.0% | |
| TTCGTTGTTCCTACTGACGA+CGG | + | Chr8:87328764-87328783 | MsG0880047512.01.T02:CDS | 45.0% | |
| ! | GGAGAACTTTACGGGACTTT+TGG | + | Chr8:87330031-87330050 | MsG0880047512.01.T02:three_prime_UTR | 45.0% |
| ! | TAAAGAGTTTTCGAAGCGGC+TGG | + | Chr8:87328390-87328409 | MsG0880047512.01.T02:CDS | 45.0% |
| ! | TTTCGGTTCGTTTAGCGAAC+CGG | - | Chr8:87329479-87329498 | None:intergenic | 45.0% |
| !! | AACCGAAATTGACTCGGATG+TGG | + | Chr8:87329491-87329510 | MsG0880047512.01.T02:CDS | 45.0% |
| !! | TGATTATTATTATTATTATT+AGG | + | Chr8:87329862-87329881 | MsG0880047512.01.T02:three_prime_UTR | 5.0% |
| AACGCTATCGTTCATGGCGT+TGG | - | Chr8:87328960-87328979 | None:intergenic | 50.0% | |
| ACCGGCCTTTAATTCTAGGC+CGG | - | Chr8:87329461-87329480 | None:intergenic | 50.0% | |
| AGTAACCAAGGGATGGTGCA+AGG | + | Chr8:87329315-87329334 | MsG0880047512.01.T02:CDS | 50.0% | |
| ATCGTGAAGCGAGGGTTATG+AGG | + | Chr8:87329361-87329380 | MsG0880047512.01.T02:CDS | 50.0% | |
| CACCCCATCCAATAGGAATG+GGG | - | Chr8:87330195-87330214 | None:intergenic | 50.0% | |
| GAGTCAAAGAAAGGCTCGAC+GGG | - | Chr8:87328686-87328705 | None:intergenic | 50.0% | |
| GCACCCCATCCAATAGGAAT+GGG | - | Chr8:87330196-87330215 | None:intergenic | 50.0% | |
| GCATGGTGAAAAAGCTTGGC+TGG | + | Chr8:87329945-87329964 | MsG0880047512.01.T02:three_prime_UTR | 50.0% | |
| GCGAACCGGCCTTTAATTCT+AGG | - | Chr8:87329465-87329484 | None:intergenic | 50.0% | |
| GGAGTCAAAGAAAGGCTCGA+CGG | - | Chr8:87328687-87328706 | None:intergenic | 50.0% | |
| GGATCGGAATCGATGGTTTC+AGG | + | Chr8:87329282-87329301 | MsG0880047512.01.T02:CDS | 50.0% | |
| GTTCCTACTGACGACGGTTA+CGG | + | Chr8:87328770-87328789 | MsG0880047512.01.T02:CDS | 50.0% | |
| TCGGAATCGATGGTTTCAGG+GGG | + | Chr8:87329285-87329304 | MsG0880047512.01.T02:CDS | 50.0% | |
| TCTGACACCGTGTTTGCATC+TGG | - | Chr8:87329246-87329265 | None:intergenic | 50.0% | |
| TGGAATGGATCGTGAAGCGA+GGG | + | Chr8:87329353-87329372 | MsG0880047512.01.T02:CDS | 50.0% | |
| ! | AGTGGTGCCAGATGCAAACA+CGG | + | Chr8:87329236-87329255 | MsG0880047512.01.T02:CDS | 50.0% |
| ! | GGATTTGACGACGGATTCAG+CGG | - | Chr8:87328708-87328727 | None:intergenic | 50.0% |
| ! | GGGGGTGTGAATAGTAACCA+AGG | + | Chr8:87329303-87329322 | MsG0880047512.01.T02:CDS | 50.0% |
| AAAGTGGGAACGACGCCGTA+TGG | - | Chr8:87329576-87329595 | None:intergenic | 55.0% | |
| ATGATGCTGAAGCAGCTGCG+TGG | + | Chr8:87328798-87328817 | MsG0880047512.01.T02:CDS | 55.0% | |
| CCCGGCCTAGAATTAAAGGC+CGG | + | Chr8:87329457-87329476 | MsG0880047512.01.T02:CDS | 55.0% | |
| CCGGCCTTTAATTCTAGGCC+GGG | - | Chr8:87329460-87329479 | None:intergenic | 55.0% | |
| GAACTGCGAGAGGATCAGCA+GGG | - | Chr8:87329530-87329549 | None:intergenic | 55.0% | |
| GGCACCCCATCCAATAGGAA+TGG | - | Chr8:87330197-87330216 | None:intergenic | 55.0% | |
| GTGGAATGGATCGTGAAGCG+AGG | + | Chr8:87329352-87329371 | MsG0880047512.01.T02:CDS | 55.0% | |
| TGACCGTAACCGTCGTCAGT+AGG | - | Chr8:87328776-87328795 | None:intergenic | 55.0% | |
| TGCGTCAGCTTTGCACGTGA+CGG | - | Chr8:87328591-87328610 | None:intergenic | 55.0% | |
| TTCATCATCCGCGCTGGAGT+AGG | - | Chr8:87329001-87329020 | None:intergenic | 55.0% | |
| TTGCTCCTTGCACCATCCCT+TGG | - | Chr8:87329323-87329342 | None:intergenic | 55.0% | |
| TTGGCGCGGTTGTACGGTAT+GGG | + | Chr8:87329910-87329929 | MsG0880047512.01.T02:three_prime_UTR | 55.0% | |
| TTTGGCGCGGTTGTACGGTA+TGG | + | Chr8:87329909-87329928 | MsG0880047512.01.T02:three_prime_UTR | 55.0% | |
| ! | AGAACGGCAAAAAAGCGCGG+CGG | - | Chr8:87328456-87328475 | None:intergenic | 55.0% |
| !! | TGGATTGGCGGAGTGGATGT+CGG | - | Chr8:87328639-87328658 | None:intergenic | 55.0% |
| ATGGGGGCAGAGCAAGAGCA+TGG | + | Chr8:87329928-87329947 | MsG0880047512.01.T02:three_prime_UTR | 60.0% | |
| GGAACTGCGAGAGGATCAGC+AGG | - | Chr8:87329531-87329550 | None:intergenic | 60.0% | |
| GGAGTGGCACCCCATCCAAT+AGG | - | Chr8:87330202-87330221 | None:intergenic | 60.0% | |
| GGCGGTGGAGGATTTGACGA+CGG | - | Chr8:87328717-87328736 | None:intergenic | 60.0% | |
| GTGACGACGAGCGAGTGGAT+TGG | - | Chr8:87328654-87328673 | None:intergenic | 60.0% | |
| TGGCGCGGTTGTACGGTATG+GGG | + | Chr8:87329911-87329930 | MsG0880047512.01.T02:three_prime_UTR | 60.0% | |
| ! | GAACGGCAAAAAAGCGCGGC+GGG | - | Chr8:87328455-87328474 | None:intergenic | 60.0% |
| ! | GCTTTGCACGTGACGGAAGC+TGG | - | Chr8:87328584-87328603 | None:intergenic | 60.0% |
| !! | ACGACGAGCGAGTGGATTGG+CGG | - | Chr8:87328651-87328670 | None:intergenic | 60.0% |
| ACATCCAGACGCGCTCGTGG+CGG | - | Chr8:87328541-87328560 | None:intergenic | 65.0% | |
| CACACATCCAGACGCGCTCG+TGG | - | Chr8:87328544-87328563 | None:intergenic | 65.0% | |
| CGTTCGTGACGACGAGCGAG+TGG | - | Chr8:87328659-87328678 | None:intergenic | 65.0% | |
| GGCGCGGTTGTACGGTATGG+GGG | + | Chr8:87329912-87329931 | MsG0880047512.01.T02:three_prime_UTR | 65.0% | |
| !! | GAGCGAGTGGATTGGCGGAG+TGG | - | Chr8:87328646-87328665 | None:intergenic | 65.0% |
| AGACGCGGCTGCTGCAGCAG+CGG | - | Chr8:87328738-87328757 | None:intergenic | 70.0% | |
| CATCCAGACGCGCTCGTGGC+GGG | - | Chr8:87328540-87328559 | None:intergenic | 70.0% | |
| CTTCCCGCCACGAGCGCGTC+TGG | + | Chr8:87328534-87328553 | MsG0880047512.01.T02:CDS | 75.0% | |
| TGCTGCAGCAGCGGCGGTGG+AGG | - | Chr8:87328729-87328748 | None:intergenic | 75.0% | |
| ! | CGCGGCTGCTGCAGCAGCGG+CGG | - | Chr8:87328735-87328754 | None:intergenic | 80.0% |
| ! | GGCTGCTGCAGCAGCGGCGG+TGG | - | Chr8:87328732-87328751 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 87328205 | 87330288 | 87328205 | ID=MsG0880047512.01;Name=MsG0880047512.01 |
| Chr8 | mRNA | 87328205 | 87330288 | 87328205 | ID=MsG0880047512.01.T01;Parent=MsG0880047512.01;Name=MsG0880047512.01.T01;_AED=0.11;_eAED=0.11;_QI=163|1|1|1|0.5|0.33|3|413|376 |
| Chr8 | exon | 87329210 | 87329607 | 87329210 | ID=MsG0880047512.01.T01:exon:34689;Parent=MsG0880047512.01.T01 |
| Chr8 | exon | 87329884 | 87330288 | 87329884 | ID=MsG0880047512.01.T01:exon:34690;Parent=MsG0880047512.01.T01 |
| Chr8 | five_prime_UTR | 87328205 | 87328367 | 87328205 | ID=MsG0880047512.01.T01:five_prime_utr;Parent=MsG0880047512.01.T01 |
| Chr8 | CDS | 87328368 | 87329108 | 87328368 | ID=MsG0880047512.01.T01:cds;Parent=MsG0880047512.01.T01 |
| Chr8 | CDS | 87329210 | 87329599 | 87329210 | ID=MsG0880047512.01.T01:cds;Parent=MsG0880047512.01.T01 |
| Chr8 | three_prime_UTR | 87329600 | 87329607 | 87329600 | ID=MsG0880047512.01.T01:three_prime_utr;Parent=MsG0880047512.01.T01 |
| Chr8 | three_prime_UTR | 87329884 | 87330288 | 87329884 | ID=MsG0880047512.01.T01:three_prime_utr;Parent=MsG0880047512.01.T01 |
| Chr8 | mRNA | 87328205 | 87330288 | 87328205 | ID=MsG0880047512.01.T02;Parent=MsG0880047512.01;Name=MsG0880047512.01.T02;_AED=0.05;_eAED=0.05;_QI=163|1|1|1|1|1|2|689|376 |
| Chr8 | exon | 87329210 | 87330288 | 87329210 | ID=MsG0880047512.01.T02:exon:34691;Parent=MsG0880047512.01.T02 |
| Chr8 | five_prime_UTR | 87328205 | 87328367 | 87328205 | ID=MsG0880047512.01.T02:five_prime_utr;Parent=MsG0880047512.01.T02 |
| Chr8 | CDS | 87328368 | 87329108 | 87328368 | ID=MsG0880047512.01.T02:cds;Parent=MsG0880047512.01.T02 |
| Chr8 | CDS | 87329210 | 87329599 | 87329210 | ID=MsG0880047512.01.T02:cds;Parent=MsG0880047512.01.T02 |
| Chr8 | three_prime_UTR | 87329600 | 87330288 | 87329600 | ID=MsG0880047512.01.T02:three_prime_utr;Parent=MsG0880047512.01.T02 |
| Gene Sequence |
| Protein sequence |
