Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004597.01.T01 | XP_003591144.1 | 81.924 | 343 | 36 | 8 | 1 | 326 | 69 | 402 | 2.24E-145 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004597.01.T01 | G7I8P5 | 81.924 | 343 | 36 | 8 | 1 | 326 | 69 | 402 | 1.07e-145 | 426 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001143.01 | MsG0180004597.01 | 0.806630 | 7.493915e-50 | 4.087192e-47 |
| MsG0180003324.01 | MsG0180004597.01 | -0.828278 | 9.824744e-55 | 9.719935e-52 |
| MsG0180003620.01 | MsG0180004597.01 | 0.867834 | 1.021861e-65 | 3.617760e-62 |
| MsG0180003898.01 | MsG0180004597.01 | 0.803391 | 3.565725e-49 | 1.789643e-46 |
| MsG0180004124.01 | MsG0180004597.01 | -0.822845 | 1.904327e-53 | 1.612539e-50 |
| MsG0180004125.01 | MsG0180004597.01 | -0.823260 | 1.524423e-53 | 1.305960e-50 |
| MsG0180004597.01 | MsG0180005608.01 | 0.821595 | 3.714413e-53 | 3.035048e-50 |
| MsG0180004597.01 | MsG0480021175.01 | 0.828968 | 6.691557e-55 | 6.754213e-52 |
| MsG0180004597.01 | MsG0580026073.01 | -0.800067 | 1.714939e-48 | 7.910413e-46 |
| MsG0180004597.01 | MsG0580026546.01 | 0.812099 | 5.027256e-51 | 3.167247e-48 |
| MsG0180004597.01 | MsG0780039816.01 | -0.809275 | 2.050382e-50 | 1.198648e-47 |
| MsG0180004597.01 | MsG0780040460.01 | 0.823199 | 1.575092e-53 | 1.347081e-50 |
| MsG0180004597.01 | MsG0880047512.01 | -0.817711 | 2.861501e-52 | 2.099588e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004597.01.T01 | MTR_1g083310 | 81.924 | 343 | 36 | 8 | 1 | 326 | 69 | 402 | 2.72e-149 | 426 |
| MsG0180004597.01.T01 | MTR_7g113110 | 30.636 | 346 | 154 | 15 | 1 | 326 | 86 | 365 | 3.54e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 75 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGTTCTTCTCTGGTTT+TGG | 0.218419 | 1:-80169546 | None:intergenic |
| TGTGATGAATTATACGATTC+TGG | 0.253530 | 1:-80170374 | None:intergenic |
| GCCGTTAACTTGAACGTTCT+TGG | 0.324864 | 1:-80169670 | None:intergenic |
| TGTTTCTCTTTGTTCTTCTC+TGG | 0.327013 | 1:-80169552 | None:intergenic |
| AACATGCTTCCCTGTCTTGT+TGG | 0.331354 | 1:-80169481 | None:intergenic |
| CCCGGTTGTGGAACCTTCGT+TGG | 0.354242 | 1:-80169742 | None:intergenic |
| GGTTCATACGTGTACGGCCT+TGG | 0.369283 | 1:-80170353 | None:intergenic |
| TTTCATGGGCAAGTACATTC+AGG | 0.376558 | 1:+80170098 | MsG0180004597.01.T01:CDS |
| GCACCGGGTACTGGTGGTTC+AGG | 0.381070 | 1:+80170035 | MsG0180004597.01.T01:CDS |
| CCCAACGAAGGTTCCACAAC+CGG | 0.387354 | 1:+80169741 | MsG0180004597.01.T01:CDS |
| ACTGTTTGCTTTCTCACCTC+TGG | 0.389171 | 1:-80169798 | None:intergenic |
| TCCAAGAACGTTCAAGTTAA+CGG | 0.392742 | 1:+80169669 | MsG0180004597.01.T01:CDS |
| GCTATCACCACCAGTGTTAC+CGG | 0.393369 | 1:-80169919 | None:intergenic |
| ACCAGTGTTACCGGTTGAAC+CGG | 0.408584 | 1:-80169910 | None:intergenic |
| TTCTCGGCTACCGGTTTGGC+TGG | 0.414295 | 1:-80169828 | None:intergenic |
| GGTTCCACAACCGGGAAAAC+CGG | 0.417195 | 1:+80169750 | MsG0180004597.01.T01:CDS |
| CAGGGAAGCATGTTGAGCTT+TGG | 0.426685 | 1:+80169490 | MsG0180004597.01.T01:CDS |
| ATGACGTGGCGGTACTTCAT+TGG | 0.427491 | 1:-80170132 | None:intergenic |
| TTCCGTGATGCACCGGGTAC+TGG | 0.429866 | 1:+80170026 | MsG0180004597.01.T01:CDS |
| TTTCACCCACCGCAGTACTA+TGG | 0.437794 | 1:+80170170 | MsG0180004597.01.T01:CDS |
| GTGGCGGTACTTCATTGGTT+AGG | 0.440696 | 1:-80170127 | None:intergenic |
| TTTGAGAAAACCGGTTCAAC+CGG | 0.444090 | 1:+80169900 | MsG0180004597.01.T01:CDS |
| GTACTGGTGGTTCAGGTAAC+CGG | 0.450368 | 1:+80170042 | MsG0180004597.01.T01:CDS |
| GGTTCTTCATTATCATCGTT+AGG | 0.452727 | 1:-80169876 | None:intergenic |
| CCGGTTGTGGAACCTTCGTT+GGG | 0.457013 | 1:-80169741 | None:intergenic |
| GATGAATACGGGAAATGAAA+TGG | 0.459560 | 1:+80170322 | MsG0180004597.01.T01:CDS |
| TGATGGCTCACGGTAACAAC+CGG | 0.471619 | 1:-80170224 | None:intergenic |
| AACTTGAACGTTCTTGGATG+TGG | 0.475224 | 1:-80169664 | None:intergenic |
| CACATGACATTACACGCATT+AGG | 0.475926 | 1:-80170434 | None:intergenic |
| ATCACATGCGCGTATTGATA+CGG | 0.476164 | 1:-80170302 | None:intergenic |
| GAAGAACCATTTGAGAAAAC+CGG | 0.477484 | 1:+80169891 | MsG0180004597.01.T01:CDS |
| GAAAACAACAACAACGGAAC+AGG | 0.484637 | 1:+80169627 | MsG0180004597.01.T01:CDS |
| TACGTGTACGGCCTTGGCTG+AGG | 0.491015 | 1:-80170347 | None:intergenic |
| TTTGAAATTGACCATTTGAC+CGG | 0.491553 | 1:-80170061 | None:intergenic |
| AGTGGTGTTACCAGCCAAAC+CGG | 0.494179 | 1:+80169818 | MsG0180004597.01.T01:CDS |
| GGTTCAGGTAACCGGTCAAA+TGG | 0.494989 | 1:+80170050 | MsG0180004597.01.T01:CDS |
| CCACAACTGACCAACAAGAC+AGG | 0.503021 | 1:+80169471 | None:intergenic |
| TGAACACTTCCGTGATGCAC+CGG | 0.507152 | 1:+80170019 | MsG0180004597.01.T01:CDS |
| TATCCTAGCAGCAGTAGTTA+CGG | 0.527016 | 1:+80170254 | MsG0180004597.01.T01:CDS |
| GCTAAAAGCGGCAACGGAAG+CGG | 0.527918 | 1:+80169699 | MsG0180004597.01.T01:CDS |
| ATACGCGCATGTGATGAATA+CGG | 0.539599 | 1:+80170310 | MsG0180004597.01.T01:CDS |
| ACCGGTTCAACCGGTAACAC+TGG | 0.546173 | 1:+80169909 | MsG0180004597.01.T01:CDS |
| GCAGCAGCAAAATGAGATTG+AGG | 0.556418 | 1:-80170197 | None:intergenic |
| TACGCGCATGTGATGAATAC+GGG | 0.564097 | 1:+80170311 | MsG0180004597.01.T01:CDS |
| TGCGCGTATTGATACGGTTG+TGG | 0.564403 | 1:-80170296 | None:intergenic |
| CCAACGAAGGTTCCACAACC+GGG | 0.575422 | 1:+80169742 | MsG0180004597.01.T01:CDS |
| GAACACTTCCGTGATGCACC+GGG | 0.582325 | 1:+80170020 | MsG0180004597.01.T01:CDS |
| GCACCGTAACTACTGCTGCT+AGG | 0.585225 | 1:-80170257 | None:intergenic |
| TGCTAGGATACGCTGTATGA+TGG | 0.586279 | 1:-80170241 | None:intergenic |
| AACACCGCTAAAAGCGGCAA+CGG | 0.586332 | 1:+80169693 | MsG0180004597.01.T01:CDS |
| TTACCTGAACCACCAGTACC+CGG | 0.601937 | 1:-80170038 | None:intergenic |
| CACCAGTACCCGGTGCATCA+CGG | 0.602569 | 1:-80170028 | None:intergenic |
| CGTGATGCACCGGGTACTGG+TGG | 0.603532 | 1:+80170029 | MsG0180004597.01.T01:CDS |
| ATGAAATGGAGCCTCAGCCA+AGG | 0.607085 | 1:+80170336 | MsG0180004597.01.T01:CDS |
| CACAACTGACCAACAAGACA+GGG | 0.610882 | 1:+80169472 | None:intergenic |
| AACGGCAACACCGCTAAAAG+CGG | 0.614579 | 1:+80169687 | MsG0180004597.01.T01:CDS |
| AACAGTGAAAACAACAACAA+CGG | 0.621781 | 1:+80169621 | MsG0180004597.01.T01:CDS |
| GGAGGACCATAGTACTGCGG+TGG | 0.622560 | 1:-80170176 | None:intergenic |
| GATTCTGGTTCATACGTGTA+CGG | 0.638610 | 1:-80170359 | None:intergenic |
| AAATAAACAAAAGAATCTGA+CGG | 0.643148 | 1:-80170398 | None:intergenic |
| ATACGCTGTATGATGGCTCA+CGG | 0.643410 | 1:-80170234 | None:intergenic |
| AACACTGGTGGTGATAGCAG+TGG | 0.644515 | 1:+80169924 | MsG0180004597.01.T01:CDS |
| GAGGACCATAGTACTGCGGT+GGG | 0.654907 | 1:-80170175 | None:intergenic |
| TGGCTCACGGTAACAACCGG+TGG | 0.659488 | 1:-80170221 | None:intergenic |
| GCGTATTGATACGGTTGTGG+AGG | 0.666718 | 1:-80170293 | None:intergenic |
| GGTTCAACCGGTAACACTGG+TGG | 0.667820 | 1:+80169912 | MsG0180004597.01.T01:CDS |
| CTCTTGAACATGTACCACGC+CGG | 0.671118 | 1:-80169769 | None:intergenic |
| GCAGCAAAATGAGATTGAGG+AGG | 0.681939 | 1:-80170194 | None:intergenic |
| AGAGGTGAGAAAGCAAACAG+TGG | 0.698353 | 1:+80169800 | MsG0180004597.01.T01:CDS |
| AAAGTTAACAAACCCAACGA+AGG | 0.699189 | 1:+80169729 | MsG0180004597.01.T01:CDS |
| TGTTCAAGAGCTAAAGCCAG+AGG | 0.702356 | 1:+80169782 | MsG0180004597.01.T01:CDS |
| CACAACCGGGAAAACCGGCG+TGG | 0.709165 | 1:+80169755 | MsG0180004597.01.T01:CDS |
| TGTTCGTTAATGTAATGACG+TGG | 0.709464 | 1:-80170146 | None:intergenic |
| TCGTTAATGTAATGACGTGG+CGG | 0.723759 | 1:-80170143 | None:intergenic |
| TGAGGAGGACCATAGTACTG+CGG | 0.754897 | 1:-80170179 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAACAAAAGAATCTGA+CGG | - | Chr1:80170401-80170420 | None:intergenic | 20.0% |
| !! | TGAAAAAGAAGAAAAAGAAA+GGG | + | Chr1:80169949-80169968 | MsG0180004597.01.T01:CDS | 20.0% |
| ! | GTGAAAAAGAAGAAAAAGAA+AGG | + | Chr1:80169948-80169967 | MsG0180004597.01.T01:CDS | 25.0% |
| !! | AGTCAAAGTAGTAATTTTCA+TGG | + | Chr1:80170083-80170102 | MsG0180004597.01.T01:CDS | 25.0% |
| !! | GTCAAAGTAGTAATTTTCAT+GGG | + | Chr1:80170084-80170103 | MsG0180004597.01.T01:CDS | 25.0% |
| !!! | TTCTTCTTTTTTGATTCTGT+TGG | - | Chr1:80169522-80169541 | None:intergenic | 25.0% |
| AACAGTGAAAACAACAACAA+CGG | + | Chr1:80169621-80169640 | MsG0180004597.01.T01:CDS | 30.0% | |
| AAGAAGAAAAAGAAAGGGAA+AGG | + | Chr1:80169954-80169973 | MsG0180004597.01.T01:CDS | 30.0% | |
| TGTGATGAATTATACGATTC+TGG | - | Chr1:80170377-80170396 | None:intergenic | 30.0% | |
| ! | TTTGAAATTGACCATTTGAC+CGG | - | Chr1:80170064-80170083 | None:intergenic | 30.0% |
| !!! | TTTTTTGATTCTGTTGGTTC+AGG | - | Chr1:80169516-80169535 | None:intergenic | 30.0% |
| AAAGTTAACAAACCCAACGA+AGG | + | Chr1:80169729-80169748 | MsG0180004597.01.T01:CDS | 35.0% | |
| GAAGAACCATTTGAGAAAAC+CGG | + | Chr1:80169891-80169910 | MsG0180004597.01.T01:CDS | 35.0% | |
| GATGAATACGGGAAATGAAA+TGG | + | Chr1:80170322-80170341 | MsG0180004597.01.T01:CDS | 35.0% | |
| GGTTCTTCATTATCATCGTT+AGG | - | Chr1:80169879-80169898 | None:intergenic | 35.0% | |
| TGTTCGTTAATGTAATGACG+TGG | - | Chr1:80170149-80170168 | None:intergenic | 35.0% | |
| TGTTTCTCTTTGTTCTTCTC+TGG | - | Chr1:80169555-80169574 | None:intergenic | 35.0% | |
| ! | TCCAAGAACGTTCAAGTTAA+CGG | + | Chr1:80169669-80169688 | MsG0180004597.01.T01:CDS | 35.0% |
| !! | TCTTTGTTCTTCTCTGGTTT+TGG | - | Chr1:80169549-80169568 | None:intergenic | 35.0% |
| AACTTGAACGTTCTTGGATG+TGG | - | Chr1:80169667-80169686 | None:intergenic | 40.0% | |
| ATACGCGCATGTGATGAATA+CGG | + | Chr1:80170310-80170329 | MsG0180004597.01.T01:CDS | 40.0% | |
| CACATGACATTACACGCATT+AGG | - | Chr1:80170437-80170456 | None:intergenic | 40.0% | |
| GAAAACAACAACAACGGAAC+AGG | + | Chr1:80169627-80169646 | MsG0180004597.01.T01:CDS | 40.0% | |
| TATCCTAGCAGCAGTAGTTA+CGG | + | Chr1:80170254-80170273 | MsG0180004597.01.T01:CDS | 40.0% | |
| TCGTTAATGTAATGACGTGG+CGG | - | Chr1:80170146-80170165 | None:intergenic | 40.0% | |
| TTTCATGGGCAAGTACATTC+AGG | + | Chr1:80170098-80170117 | MsG0180004597.01.T01:CDS | 40.0% | |
| ! | ATCACATGCGCGTATTGATA+CGG | - | Chr1:80170305-80170324 | None:intergenic | 40.0% |
| ! | TTTGAGAAAACCGGTTCAAC+CGG | + | Chr1:80169900-80169919 | MsG0180004597.01.T01:CDS | 40.0% |
| !! | GATTCTGGTTCATACGTGTA+CGG | - | Chr1:80170362-80170381 | None:intergenic | 40.0% |
| !! | GTTGAACCGGTTTTCTCAAA+TGG | - | Chr1:80169900-80169919 | None:intergenic | 40.0% |
| !!! | CTAACTTTTTTCTCGGCTAC+CGG | - | Chr1:80169840-80169859 | None:intergenic | 40.0% |
| !!! | TGCGACGCTAACTTTTTTCT+CGG | - | Chr1:80169847-80169866 | None:intergenic | 40.0% |
| AACATGCTTCCCTGTCTTGT+TGG | - | Chr1:80169484-80169503 | None:intergenic | 45.0% | |
| ACTGTTTGCTTTCTCACCTC+TGG | - | Chr1:80169801-80169820 | None:intergenic | 45.0% | |
| AGAGGTGAGAAAGCAAACAG+TGG | + | Chr1:80169800-80169819 | MsG0180004597.01.T01:CDS | 45.0% | |
| ATACGCTGTATGATGGCTCA+CGG | - | Chr1:80170237-80170256 | None:intergenic | 45.0% | |
| GCAGCAAAATGAGATTGAGG+AGG | - | Chr1:80170197-80170216 | None:intergenic | 45.0% | |
| GCAGCAGCAAAATGAGATTG+AGG | - | Chr1:80170200-80170219 | None:intergenic | 45.0% | |
| TACGCGCATGTGATGAATAC+GGG | + | Chr1:80170311-80170330 | MsG0180004597.01.T01:CDS | 45.0% | |
| TGCTAGGATACGCTGTATGA+TGG | - | Chr1:80170244-80170263 | None:intergenic | 45.0% | |
| TGTTCAAGAGCTAAAGCCAG+AGG | + | Chr1:80169782-80169801 | MsG0180004597.01.T01:CDS | 45.0% | |
| ! | GCCGTTAACTTGAACGTTCT+TGG | - | Chr1:80169673-80169692 | None:intergenic | 45.0% |
| !!! | TTTTTTCTCGGCTACCGGTT+TGG | - | Chr1:80169835-80169854 | None:intergenic | 45.0% |
| AACACCGCTAAAAGCGGCAA+CGG | + | Chr1:80169693-80169712 | MsG0180004597.01.T01:CDS | 50.0% | |
| AACGGCAACACCGCTAAAAG+CGG | + | Chr1:80169687-80169706 | MsG0180004597.01.T01:CDS | 50.0% | |
| ATGAAATGGAGCCTCAGCCA+AGG | + | Chr1:80170336-80170355 | MsG0180004597.01.T01:CDS | 50.0% | |
| ATGACGTGGCGGTACTTCAT+TGG | - | Chr1:80170135-80170154 | None:intergenic | 50.0% | |
| CTCTTGAACATGTACCACGC+CGG | - | Chr1:80169772-80169791 | None:intergenic | 50.0% | |
| GCTATCACCACCAGTGTTAC+CGG | - | Chr1:80169922-80169941 | None:intergenic | 50.0% | |
| GGTTCAGGTAACCGGTCAAA+TGG | + | Chr1:80170050-80170069 | MsG0180004597.01.T01:CDS | 50.0% | |
| TGAACACTTCCGTGATGCAC+CGG | + | Chr1:80170019-80170038 | MsG0180004597.01.T01:CDS | 50.0% | |
| TGAGGAGGACCATAGTACTG+CGG | - | Chr1:80170182-80170201 | None:intergenic | 50.0% | |
| TGATGGCTCACGGTAACAAC+CGG | - | Chr1:80170227-80170246 | None:intergenic | 50.0% | |
| TTACCTGAACCACCAGTACC+CGG | - | Chr1:80170041-80170060 | None:intergenic | 50.0% | |
| TTTCACCCACCGCAGTACTA+TGG | + | Chr1:80170170-80170189 | MsG0180004597.01.T01:CDS | 50.0% | |
| ! | AACACTGGTGGTGATAGCAG+TGG | + | Chr1:80169924-80169943 | MsG0180004597.01.T01:CDS | 50.0% |
| ! | ACCAGTGTTACCGGTTGAAC+CGG | - | Chr1:80169913-80169932 | None:intergenic | 50.0% |
| ! | CAGGGAAGCATGTTGAGCTT+TGG | + | Chr1:80169490-80169509 | MsG0180004597.01.T01:CDS | 50.0% |
| ! | GCGTATTGATACGGTTGTGG+AGG | - | Chr1:80170296-80170315 | None:intergenic | 50.0% |
| ! | GTACTGGTGGTTCAGGTAAC+CGG | + | Chr1:80170042-80170061 | MsG0180004597.01.T01:CDS | 50.0% |
| ! | GTGGCGGTACTTCATTGGTT+AGG | - | Chr1:80170130-80170149 | None:intergenic | 50.0% |
| ! | TCATTTTGCTGCTGCTCCAC+CGG | + | Chr1:80170205-80170224 | MsG0180004597.01.T01:CDS | 50.0% |
| ! | TGCGCGTATTGATACGGTTG+TGG | - | Chr1:80170299-80170318 | None:intergenic | 50.0% |
| !! | AGTGGTGTTACCAGCCAAAC+CGG | + | Chr1:80169818-80169837 | MsG0180004597.01.T01:CDS | 50.0% |
| CCAACGAAGGTTCCACAACC+GGG | + | Chr1:80169742-80169761 | MsG0180004597.01.T01:CDS | 55.0% | |
| CCCAACGAAGGTTCCACAAC+CGG | + | Chr1:80169741-80169760 | MsG0180004597.01.T01:CDS | 55.0% | |
| CCGGTTGTGGAACCTTCGTT+GGG | - | Chr1:80169744-80169763 | None:intergenic | 55.0% | |
| GAACACTTCCGTGATGCACC+GGG | + | Chr1:80170020-80170039 | MsG0180004597.01.T01:CDS | 55.0% | |
| GAGGACCATAGTACTGCGGT+GGG | - | Chr1:80170178-80170197 | None:intergenic | 55.0% | |
| GCACCGTAACTACTGCTGCT+AGG | - | Chr1:80170260-80170279 | None:intergenic | 55.0% | |
| GCTAAAAGCGGCAACGGAAG+CGG | + | Chr1:80169699-80169718 | MsG0180004597.01.T01:CDS | 55.0% | |
| GGTTCAACCGGTAACACTGG+TGG | + | Chr1:80169912-80169931 | MsG0180004597.01.T01:CDS | 55.0% | |
| GGTTCATACGTGTACGGCCT+TGG | - | Chr1:80170356-80170375 | None:intergenic | 55.0% | |
| GGTTCCACAACCGGGAAAAC+CGG | + | Chr1:80169750-80169769 | MsG0180004597.01.T01:CDS | 55.0% | |
| ! | ACCGGTTCAACCGGTAACAC+TGG | + | Chr1:80169909-80169928 | MsG0180004597.01.T01:CDS | 55.0% |
| !!! | ATGTACCACGCCGGTTTTCC+CGG | - | Chr1:80169763-80169782 | None:intergenic | 55.0% |
| !!! | GCTTCCGTTGCCGCTTTTAG+CGG | - | Chr1:80169700-80169719 | None:intergenic | 55.0% |
| CACCAGTACCCGGTGCATCA+CGG | - | Chr1:80170031-80170050 | None:intergenic | 60.0% | |
| CCCGGTTGTGGAACCTTCGT+TGG | - | Chr1:80169745-80169764 | None:intergenic | 60.0% | |
| GGAGGACCATAGTACTGCGG+TGG | - | Chr1:80170179-80170198 | None:intergenic | 60.0% | |
| TACGTGTACGGCCTTGGCTG+AGG | - | Chr1:80170350-80170369 | None:intergenic | 60.0% | |
| TGGCTCACGGTAACAACCGG+TGG | - | Chr1:80170224-80170243 | None:intergenic | 60.0% | |
| TTCCGTGATGCACCGGGTAC+TGG | + | Chr1:80170026-80170045 | MsG0180004597.01.T01:CDS | 60.0% | |
| !! | TTCTCGGCTACCGGTTTGGC+TGG | - | Chr1:80169831-80169850 | None:intergenic | 60.0% |
| CACAACCGGGAAAACCGGCG+TGG | + | Chr1:80169755-80169774 | MsG0180004597.01.T01:CDS | 65.0% | |
| !! | CGTGATGCACCGGGTACTGG+TGG | + | Chr1:80170029-80170048 | MsG0180004597.01.T01:CDS | 65.0% |
| !! | GCACCGGGTACTGGTGGTTC+AGG | + | Chr1:80170035-80170054 | MsG0180004597.01.T01:CDS | 65.0% |
| !!! | CACGCCGGTTTTCCCGGTTG+TGG | - | Chr1:80169757-80169776 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 80169477 | 80170457 | 80169477 | ID=MsG0180004597.01;Name=MsG0180004597.01 |
| Chr1 | mRNA | 80169477 | 80170457 | 80169477 | ID=MsG0180004597.01.T01;Parent=MsG0180004597.01;Name=MsG0180004597.01.T01;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|326 |
| Chr1 | exon | 80169477 | 80170457 | 80169477 | ID=MsG0180004597.01.T01:exon:45796;Parent=MsG0180004597.01.T01 |
| Chr1 | CDS | 80169477 | 80170457 | 80169477 | ID=MsG0180004597.01.T01:cds;Parent=MsG0180004597.01.T01 |
| Gene Sequence |
| Protein sequence |
