AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036747.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036747.01.T01 MTR_7g018170 95.285 403 10 4 1 401 1 396 0.0 785
MsG0780036747.01.T01 MTR_4g128930 40.587 409 159 13 24 401 20 375 2.38e-80 252
MsG0780036747.01.T01 MTR_1g013450 39.433 388 148 15 24 400 4 315 6.17e-74 233
MsG0780036747.01.T01 MTR_3g105710 39.691 388 123 12 23 400 3 289 4.47e-69 220
MsG0780036747.01.T01 MTR_4g067320 43.478 92 43 1 26 108 5 96 1.84e-18 84.3
MsG0780036747.01.T01 MTR_4g067320 39.474 76 40 1 69 138 5 80 3.43e-11 63.2
MsG0780036747.01.T01 MTR_4g067320 43.478 92 43 1 26 108 5 96 1.94e-18 84.3
MsG0780036747.01.T01 MTR_4g067320 39.474 76 40 1 69 138 5 80 3.41e-11 63.5
MsG0780036747.01.T01 MTR_1g023260 41.935 93 44 1 26 108 5 97 7.16e-18 83.6
MsG0780036747.01.T01 MTR_5g021580 48.750 80 33 1 26 97 5 84 9.02e-18 81.3
MsG0780036747.01.T01 MTR_5g021580 48.750 80 33 1 26 97 5 84 9.21e-18 81.3
MsG0780036747.01.T01 MTR_1g023260 41.935 93 44 1 26 108 5 97 1.02e-17 81.3
MsG0780036747.01.T01 MTR_5g069480 42.857 91 52 0 26 116 5 95 2.27e-17 82.4
MsG0780036747.01.T01 MTR_2g073370 43.011 93 44 1 26 109 5 97 3.04e-17 82.0
MsG0780036747.01.T01 MTR_5g069480 42.857 91 52 0 26 116 5 95 3.12e-17 83.2
MsG0780036747.01.T01 MTR_7g108150 35.088 114 66 3 23 132 17 126 5.33e-17 82.4
MsG0780036747.01.T01 MTR_2g099010 40.217 92 46 1 26 108 5 96 1.84e-16 79.0
MsG0780036747.01.T01 MTR_2g099010 50.000 50 25 0 69 118 5 54 7.09e-11 62.4
MsG0780036747.01.T01 MTR_2g099010 40.217 92 46 1 26 108 5 96 2.09e-16 78.6
MsG0780036747.01.T01 MTR_2g099010 50.000 50 25 0 69 118 5 54 7.83e-11 62.4
MsG0780036747.01.T01 MTR_3g113070 33.333 111 63 1 26 125 5 115 3.43e-15 74.7
MsG0780036747.01.T01 MTR_4g071200 38.710 93 47 1 26 108 5 97 1.74e-14 72.8
MsG0780036747.01.T01 MTR_3g082630 41.758 91 52 1 26 116 5 94 2.79e-14 74.3
MsG0780036747.01.T01 MTR_3g117320 35.417 96 52 1 26 111 5 100 2.03e-13 69.7
MsG0780036747.01.T01 MTR_8g104190 32.275 189 92 5 204 375 232 401 3.39e-12 68.2
MsG0780036747.01.T01 MTR_1g109350 37.838 74 46 0 24 97 3 76 1.43e-11 65.9
MsG0780036747.01.T01 MTR_2g088900 35.165 91 59 0 16 106 91 181 3.59e-11 65.1
MsG0780036747.01.T01 MTR_1g110870 69.767 43 13 0 332 374 382 424 4.62e-11 64.7
MsG0780036747.01.T01 MTR_7g083540 68.293 41 13 0 336 376 345 385 5.13e-11 64.3
MsG0780036747.01.T01 MTR_3g034680 47.368 57 25 1 58 114 4 55 5.27e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036747.01.T01 AT3G02380 54.887 399 104 11 19 401 9 347 4.34e-130 378
MsG0780036747.01.T01 AT5G15840 52.405 395 134 13 23 401 17 373 1.14e-116 345
MsG0780036747.01.T01 AT5G15850 52.357 403 126 10 16 401 2 355 4.38e-115 340
MsG0780036747.01.T01 AT5G57660 43.590 390 156 14 23 401 19 355 8.11e-77 242
MsG0780036747.01.T01 AT5G24930 39.900 401 178 11 23 401 3 362 1.02e-74 237
MsG0780036747.01.T01 AT2G24790 40.000 360 125 12 20 376 2 273 5.17e-71 225
MsG0780036747.01.T01 AT5G15840 47.653 277 100 9 23 290 17 257 4.20e-63 204
MsG0780036747.01.T01 AT2G24790 42.857 182 78 5 20 198 2 160 7.54e-41 144
MsG0780036747.01.T01 AT5G48250 29.737 380 208 16 26 373 5 357 2.52e-24 103
MsG0780036747.01.T01 AT1G78600 44.565 92 42 1 26 108 5 96 1.87e-18 85.5
MsG0780036747.01.T01 AT1G78600 44.565 92 42 1 26 108 5 96 1.94e-18 85.9
MsG0780036747.01.T01 AT1G06040 43.478 92 43 1 26 108 5 96 2.89e-17 81.3
MsG0780036747.01.T01 AT2G21320 47.500 80 34 1 26 97 5 84 5.00e-17 78.6
MsG0780036747.01.T01 AT2G47890 38.710 93 55 1 24 116 11 101 6.42e-17 81.3
MsG0780036747.01.T01 AT1G06040 43.478 92 43 1 26 108 5 96 8.96e-17 78.2
MsG0780036747.01.T01 AT2G47890 38.710 93 55 1 24 116 11 101 1.11e-16 79.3
MsG0780036747.01.T01 AT2G47890 38.710 93 55 1 24 116 11 101 1.17e-16 80.9
MsG0780036747.01.T01 AT4G38960 45.000 80 36 1 26 97 5 84 1.50e-16 77.8
MsG0780036747.01.T01 AT4G38960 45.000 80 36 1 26 97 5 84 1.50e-16 77.8
MsG0780036747.01.T01 AT3G21880 26.098 387 210 13 26 376 5 351 3.25e-16 80.1
MsG0780036747.01.T01 AT3G21880 26.098 387 210 13 26 376 9 355 3.35e-16 80.1
MsG0780036747.01.T01 AT3G21880 26.098 387 210 13 26 376 9 355 3.35e-16 80.1
MsG0780036747.01.T01 AT2G33500 34.127 126 75 2 25 150 11 128 4.76e-16 79.7
MsG0780036747.01.T01 AT2G33500 63.043 46 17 0 331 376 355 400 1.39e-11 66.2
MsG0780036747.01.T01 AT2G33500 34.127 126 75 2 25 150 11 128 4.78e-16 79.7
MsG0780036747.01.T01 AT2G33500 63.043 46 17 0 331 376 356 401 1.39e-11 66.2
MsG0780036747.01.T01 AT2G31380 40.217 92 46 1 26 108 5 96 7.03e-16 77.0
MsG0780036747.01.T01 AT1G75540 37.895 95 47 1 26 108 5 99 9.09e-16 78.2
MsG0780036747.01.T01 AT1G28050 35.922 103 63 1 26 128 9 108 1.53e-14 75.5
MsG0780036747.01.T01 AT1G68520 36.290 124 73 3 257 377 282 402 7.20e-13 70.1
MsG0780036747.01.T01 AT1G73870 68.085 47 15 0 331 377 344 390 9.43e-13 69.7
MsG0780036747.01.T01 AT1G68190 34.000 100 61 2 24 123 41 135 9.83e-13 69.7
MsG0780036747.01.T01 AT3G07650 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
MsG0780036747.01.T01 AT3G07650 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
MsG0780036747.01.T01 AT3G07650 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
MsG0780036747.01.T01 AT3G07650 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
MsG0780036747.01.T01 AT1G68190 34.000 100 61 2 24 123 12 106 1.48e-12 68.9
MsG0780036747.01.T01 AT1G68190 34.000 100 61 2 24 123 12 106 1.48e-12 68.9
MsG0780036747.01.T01 AT1G25440 37.778 135 65 3 250 374 278 403 1.90e-12 68.9
MsG0780036747.01.T01 AT4G15250 35.714 84 54 0 26 109 5 88 2.80e-12 67.8
MsG0780036747.01.T01 AT4G10240 34.694 98 45 2 26 108 5 98 6.47e-12 63.9
MsG0780036747.01.T01 AT4G39070 36.559 93 49 1 26 108 5 97 4.18e-11 63.2
MsG0780036747.01.T01 AT5G14370 47.619 63 33 0 314 376 276 338 5.55e-11 63.9

Find 129 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGTTTGTTTGTCAATTT+TGG 0.123201 7:+13099364 None:intergenic
TTGACGAAATTACAGTAATT+TGG 0.192997 7:+13095963 None:intergenic
GTCCCGATTCTTCCAATTTC+CGG 0.213967 7:-13098996 MsG0780036747.01.T01:CDS
CTCATCATGATGAGTATTAT+TGG 0.214592 7:+13098650 None:intergenic
CTTCATCTTCGGCACCTAAA+AGG 0.221370 7:+13098949 None:intergenic
TGAAATGATGTTAAACAAAA+TGG 0.230587 7:-13096082 MsG0780036747.01.T01:three_prime_UTR
CCAATTTCCGGTTACCTTTA+CGG 0.243807 7:-13098984 MsG0780036747.01.T01:CDS
AATAGGTCAATTGTTCCTTT+TGG 0.257022 7:+13096361 None:intergenic
CCTCGAGGCACGAACGCGTC+TGG 0.290131 7:-13099142 MsG0780036747.01.T01:CDS
GAATAGGTCATGGTTGATTC+TGG 0.297791 7:+13096391 None:intergenic
GAAACTCGGCCGCGTATAAA+AGG 0.298232 7:-13096202 MsG0780036747.01.T01:CDS
ATATATTGACACAATATAAA+AGG 0.303540 7:-13095642 MsG0780036747.01.T01:three_prime_UTR
CCACGTTGCCGCAGACCTTA+TGG 0.314996 7:+13099277 None:intergenic
TAAGTGCATGTTTGAATTGA+TGG 0.319110 7:-13096050 MsG0780036747.01.T01:three_prime_UTR
TTGTTATTGATGTTCTTTAG+AGG 0.325161 7:+13098813 None:intergenic
ATGAAAATGAAGCTGCTTCA+TGG 0.340820 7:-13098848 MsG0780036747.01.T01:CDS
CTCTATCCATTGGAGAGAAA+TGG 0.342666 7:+13096311 None:intergenic
GAAAATTTGAGAAAACAATT+AGG 0.345101 7:-13096249 MsG0780036747.01.T01:CDS
TGGTAATAGTAAAAGATAAA+TGG 0.346877 7:+13095874 None:intergenic
AGCCGCCGGGGCACGCTCGC+AGG 0.350184 7:+13099109 None:intergenic
CATAATCAAGAGGGTAATAA+TGG 0.353323 7:-13098756 MsG0780036747.01.T01:CDS
GGCTTTGTCGGCGGTGGTTG+CGG 0.358641 7:-13098927 MsG0780036747.01.T01:CDS
CAACAACAACAAGATCATTA+TGG 0.359775 7:-13098618 MsG0780036747.01.T01:CDS
TTTAACATCATTTCAGAAAG+AGG 0.365033 7:+13096090 None:intergenic
CTAATTACAGAAGTTGGATA+TGG 0.366492 7:-13096121 MsG0780036747.01.T01:CDS
TGGGAAGACATTTGAATAGA+AGG 0.383605 7:+13096331 None:intergenic
CCGTAAAGGTAACCGGAAAT+TGG 0.390811 7:+13098984 None:intergenic
GTCGGCGGTGGTTGCGGTGG+CGG 0.397594 7:-13098921 MsG0780036747.01.T01:CDS
GACACAATATAAAAGGATAA+TGG 0.398986 7:-13095635 MsG0780036747.01.T01:three_prime_UTR
GAATAGAAGGACCTGAAAAT+AGG 0.406008 7:+13096344 None:intergenic
TAACCGGAAATTGGAAGAAT+CGG 0.415877 7:+13098993 None:intergenic
TATCCATGAGTGTATTACTT+TGG 0.422011 7:-13095590 MsG0780036747.01.T01:three_prime_UTR
GAGTTTGAGTCTTCCAAAGC+TGG 0.426808 7:-13098516 MsG0780036747.01.T01:CDS
GGTGGCTGTGGCTGAGGTGG+TGG 0.428121 7:+13099298 None:intergenic
GAAGAATCGGGACACGTTGA+TGG 0.431550 7:+13099006 None:intergenic
TCAGGTTTCAGTTTCATCAA+TGG 0.434568 7:-13096428 MsG0780036747.01.T01:intron
CAAACATGCACTTAGTTCTC+TGG 0.436340 7:+13096059 None:intergenic
CCTTATGGTGGCTGTGGCTG+AGG 0.436720 7:+13099292 None:intergenic
GGCACCTAAAAGGGTGGCCG+GGG 0.437460 7:+13098959 None:intergenic
AAATCTTGCTCCAACATTTG+TGG 0.438282 7:+13099326 None:intergenic
ATTGTAACTGAATCCAGCTT+TGG 0.441148 7:+13098503 None:intergenic
TGTACCTGCTGTTGTTGAAC+AGG 0.442029 7:+13098558 None:intergenic
TGAAGGTGTTGATCATGATA+TGG 0.443702 7:-13098874 MsG0780036747.01.T01:CDS
GATGAAGGCTTTGTCGGCGG+TGG 0.445280 7:-13098933 MsG0780036747.01.T01:CDS
ATTACTGTAATTTCGTCAAA+CGG 0.446563 7:-13095959 MsG0780036747.01.T01:three_prime_UTR
TCTATCCATTGGAGAGAAAT+GGG 0.447374 7:+13096312 None:intergenic
GTCTTCCCATTTCTCTCCAA+TGG 0.450964 7:-13096317 MsG0780036747.01.T01:CDS
ACATCACTAATTACAGAAGT+TGG 0.453991 7:-13096127 MsG0780036747.01.T01:CDS
CGCGGCAGAAAACCGCGCAT+GGG 0.457653 7:+13099225 None:intergenic
TTCATCTTCGGCACCTAAAA+GGG 0.458034 7:+13098950 None:intergenic
GGCCTGCGAGCGTGCCCCGG+CGG 0.459298 7:-13099111 MsG0780036747.01.T01:CDS
GCCGACAAAGCCTTCATCTT+CGG 0.465052 7:+13098938 None:intergenic
TGAGGCCTGCGAGCGTGCCC+CGG 0.465827 7:-13099114 MsG0780036747.01.T01:CDS
CTCGAGGCACGAACGCGTCT+GGG 0.468750 7:-13099141 MsG0780036747.01.T01:CDS
TGGAGAAGTTGATGAGTACT+TGG 0.471287 7:-13098721 MsG0780036747.01.T01:CDS
TGCTCCAACATTTGTGGAGA+GGG 0.475498 7:+13099332 None:intergenic
GCCGAAGATGAAGGCTTTGT+CGG 0.477058 7:-13098939 MsG0780036747.01.T01:CDS
ACTCTTGCTTCTCTATCCAT+TGG 0.478486 7:+13096301 None:intergenic
GTGGAAGAAGAGGAGGATGA+AGG 0.479258 7:-13098891 MsG0780036747.01.T01:CDS
CGGCACCTAAAAGGGTGGCC+GGG 0.479998 7:+13098958 None:intergenic
TCAGTTTCATCAATGGATGT+TGG 0.481745 7:-13096421 MsG0780036747.01.T01:CDS
TTGCGGTGGCGGCTGTGAGG+TGG 0.489296 7:-13098910 MsG0780036747.01.T01:CDS
AGTGTTAAGGAAGTTCAAAT+AGG 0.491879 7:+13099393 None:intergenic
TCGGCACCTAAAAGGGTGGC+CGG 0.494213 7:+13098957 None:intergenic
TGGAGGTCTTGAATAGGTCA+TGG 0.494897 7:+13096381 None:intergenic
CGCAGACCTTATGGTGGCTG+TGG 0.501654 7:+13099286 None:intergenic
TTACTGTAATTTCGTCAAAC+GGG 0.504207 7:-13095958 MsG0780036747.01.T01:three_prime_UTR
AAAATACAAAAGCTATATGA+TGG 0.510161 7:+13095612 None:intergenic
AAACAATTAGGTATGCTTCA+AGG 0.513566 7:-13096237 MsG0780036747.01.T01:CDS
CCTCAGCCACAGCCACCATA+AGG 0.513892 7:-13099292 MsG0780036747.01.T01:CDS
AACCGGAAATTGGAAGAATC+GGG 0.527364 7:+13098994 None:intergenic
TTAACATCATTTCAGAAAGA+GGG 0.529345 7:+13096091 None:intergenic
CTTTACAAAGAAAAGCCGCC+GGG 0.532716 7:+13099096 None:intergenic
TATGGTGGCTGTGGCTGAGG+TGG 0.539082 7:+13099295 None:intergenic
GTGCCGCTCGGCCCCATGCG+CGG 0.541980 7:-13099237 MsG0780036747.01.T01:CDS
CGGTTACCTTTACGGTCCCC+CGG 0.545256 7:-13098976 MsG0780036747.01.T01:CDS
CTGTGGCTGAGGTGGTGGTG+AGG 0.545540 7:+13099303 None:intergenic
TTTGTCGGCGGTGGTTGCGG+TGG 0.546188 7:-13098924 MsG0780036747.01.T01:CDS
ACCTATTCAAGACCTCCAAA+AGG 0.546280 7:-13096376 MsG0780036747.01.T01:CDS
CGTTGATGGCGGCTTGCAAG+AGG 0.550196 7:+13099020 None:intergenic
TCAAATATACACTAAGGAGA+AGG 0.556269 7:-13095927 MsG0780036747.01.T01:three_prime_UTR
TCGCCAAAGTAATACACTCA+TGG 0.556273 7:+13095587 None:intergenic
AACTTCTGTAATTAGTGATG+TGG 0.558143 7:+13096129 None:intergenic
GCGCGGCAGAAAACCGCGCA+TGG 0.558424 7:+13099224 None:intergenic
TTAGTGTATATTTGAAAGCA+CGG 0.559419 7:+13095935 None:intergenic
CTTGTTGATTGCAATTCTTG+TGG 0.560089 7:-13098696 MsG0780036747.01.T01:CDS
TGGTTGCGGTGGCGGCTGTG+AGG 0.566153 7:-13098913 MsG0780036747.01.T01:CDS
CGGCTGTGAGGTGGAAGAAG+AGG 0.566525 7:-13098901 MsG0780036747.01.T01:CDS
GTTGATTGCAATTCTTGTGG+TGG 0.567048 7:-13098693 MsG0780036747.01.T01:CDS
CTCCAACATTTGTGGAGAGG+GGG 0.567790 7:+13099334 None:intergenic
CATAAGGTCTGCGGCAACGT+GGG 0.569294 7:-13099276 MsG0780036747.01.T01:CDS
TGTTCCTGTTCAACAACAGC+AGG 0.577069 7:-13098562 MsG0780036747.01.T01:CDS
AGCATGTGACACGTGCCGCT+CGG 0.577146 7:-13099249 MsG0780036747.01.T01:CDS
ATAGAGAAGCAAGAGTCCTA+AGG 0.578755 7:-13096294 MsG0780036747.01.T01:CDS
GTGCTTTCAAATATACACTA+AGG 0.578909 7:-13095933 MsG0780036747.01.T01:three_prime_UTR
GTTCGTGCCTCGAGGCTACA+CGG 0.579119 7:+13099150 None:intergenic
GCGGCAGAAAACCGCGCATG+GGG 0.588981 7:+13099226 None:intergenic
GCTTTACAAAGAAAAGCCGC+CGG 0.590036 7:+13099095 None:intergenic
AATAACAACAACATTAGCAA+TGG 0.607541 7:-13098780 MsG0780036747.01.T01:CDS
AAACCGCGCATGGGGCCGAG+CGG 0.610346 7:+13099234 None:intergenic
CTGTGAGGTGGAAGAAGAGG+AGG 0.610586 7:-13098898 MsG0780036747.01.T01:CDS
GCTCCAACATTTGTGGAGAG+GGG 0.610704 7:+13099333 None:intergenic
TTGCTCCAACATTTGTGGAG+AGG 0.611435 7:+13099331 None:intergenic
TAGCAATGGTCATAATCAAG+AGG 0.613653 7:-13098766 MsG0780036747.01.T01:CDS
ACGCGGCCGAGTTTCAGCAT+AGG 0.616320 7:+13096210 None:intergenic
CCATAAGGTCTGCGGCAACG+TGG 0.618452 7:-13099277 MsG0780036747.01.T01:CDS
GTGGATGCGTGCATCACAAG+CGG 0.620677 7:+13099181 None:intergenic
GGAAAGCCTATGCTGAAACT+CGG 0.623923 7:-13096216 MsG0780036747.01.T01:CDS
AAAGCTGGATTCAGTTACAA+TGG 0.625769 7:-13098501 MsG0780036747.01.T01:CDS
AGCAATGGTCATAATCAAGA+GGG 0.627143 7:-13098765 MsG0780036747.01.T01:CDS
CACAGCCACCATAAGGTCTG+CGG 0.627512 7:-13099285 MsG0780036747.01.T01:CDS
GCACCTAAAAGGGTGGCCGG+GGG 0.630323 7:+13098960 None:intergenic
GTTGATGGCGGCTTGCAAGA+GGG 0.631032 7:+13099021 None:intergenic
GTGGATATCAGCATCACAAG+TGG 0.632088 7:+13099052 None:intergenic
AGGCTACACGGTTTGCCGCG+TGG 0.644154 7:+13099162 None:intergenic
ATCTTCGGCACCTAAAAGGG+TGG 0.644787 7:+13098953 None:intergenic
ATAAATATGCCGAGTCTGCG+CGG 0.648190 7:+13099207 None:intergenic
TTGCAAGAGGGTTAGCAGAG+TGG 0.655218 7:+13099033 None:intergenic
GAAGATGAAGGCTTTGTCGG+CGG 0.655301 7:-13098936 MsG0780036747.01.T01:CDS
CACAAGAATTGCAATCAACA+AGG 0.655647 7:+13098697 None:intergenic
CGAACGCGTCTGGGTCTGTG+AGG 0.656001 7:-13099132 MsG0780036747.01.T01:CDS
GCTGGATTCAGTTACAATGG+TGG 0.656212 7:-13098498 MsG0780036747.01.T01:CDS
GAATCGGGACACGTTGATGG+CGG 0.662257 7:+13099009 None:intergenic
ACAGTATTAGTAGAAAGACT+TGG 0.669242 7:+13095854 None:intergenic
CGTTGCCGCAGACCTTATGG+TGG 0.670034 7:+13099280 None:intergenic
TTGTGATGCACGCATCCACG+CGG 0.677080 7:-13099177 MsG0780036747.01.T01:CDS
CGGCAAACCGTGTAGCCTCG+AGG 0.686538 7:-13099157 MsG0780036747.01.T01:CDS
TTTACAAAGAAAAGCCGCCG+GGG 0.712447 7:+13099097 None:intergenic
CCAGACGCGTTCGTGCCTCG+AGG 0.721870 7:+13099142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAAATATTTATCTTTAA+GGG - Chr7:13098108-13098127 MsG0780036747.01.T01:intron 10.0%
!! TATTGAAATATTTATCTTTA+AGG - Chr7:13098107-13098126 MsG0780036747.01.T01:intron 10.0%
!!! TGATTTTTTCAAATTATTAA+CGG - Chr7:13097762-13097781 MsG0780036747.01.T01:intron 10.0%
!! AGAGTTTGATATTATAAATT+AGG + Chr7:13097138-13097157 None:intergenic 15.0%
!! ATATATTGACACAATATAAA+AGG - Chr7:13099356-13099375 MsG0780036747.01.T01:five_prime_UTR 15.0%
!! ATATTAGTGATAAAAAAAGT+AGG + Chr7:13098529-13098548 None:intergenic 15.0%
!! CCTATAAATTATAATCTAAA+AGG + Chr7:13096811-13096830 None:intergenic 15.0%
!!! AAAAAAGTGTAAAGAAAAAA+GGG + Chr7:13097844-13097863 None:intergenic 15.0%
!!! CCTTTTAGATTATAATTTAT+AGG - Chr7:13096808-13096827 MsG0780036747.01.T01:intron 15.0%
!!! TTGTAGTTTTTTTTTCTTAA+GGG + Chr7:13096883-13096902 None:intergenic 15.0%
!!! TTTATTTTATTTTTTGCCTT+GGG + Chr7:13096944-13096963 None:intergenic 15.0%
!!! TTTGTAGTTTTTTTTTCTTA+AGG + Chr7:13096884-13096903 None:intergenic 15.0%
!!! TTTTATGAAATTGTTGAAAA+TGG + Chr7:13097601-13097620 None:intergenic 15.0%
!!! TTTTATTTTATTTTTTGCCT+TGG + Chr7:13096945-13096964 None:intergenic 15.0%
!!! TTTTTTTGAAGAAATCAAAA+TGG + Chr7:13097542-13097561 None:intergenic 15.0%
!! AAAATAAAAAAAAAGACACG+TGG - Chr7:13096956-13096975 MsG0780036747.01.T01:intron 20.0%
!! AAAATACAAAAGCTATATGA+TGG + Chr7:13099389-13099408 None:intergenic 20.0%
!! AAAATGGAATATATTAACAG+CGG + Chr7:13097526-13097545 None:intergenic 20.0%
!! GAAAATTTGAGAAAACAATT+AGG - Chr7:13098749-13098768 MsG0780036747.01.T01:CDS 20.0%
!! TATCAGCATTAAAATTCATA+AGG + Chr7:13097223-13097242 None:intergenic 20.0%
!! TCAACAATTTCATAAAAACA+TGG - Chr7:13097604-13097623 MsG0780036747.01.T01:intron 20.0%
!! TGAAATGATGTTAAACAAAA+TGG - Chr7:13098916-13098935 MsG0780036747.01.T01:CDS 20.0%
!! TGGTAATAGTAAAAGATAAA+TGG + Chr7:13099127-13099146 None:intergenic 20.0%
!! TTCAGTGTAATTATATGAAT+CGG + Chr7:13097737-13097756 None:intergenic 20.0%
!!! AAAAGTTGTTAATTTGCATT+TGG - Chr7:13097413-13097432 MsG0780036747.01.T01:intron 20.0%
!!! AATAATGGATTTTTGTTTAG+TGG - Chr7:13096257-13096276 MsG0780036747.01.T01:CDS 20.0%
!!! ATTTTTCTCAATTTGTATTG+TGG - Chr7:13099314-13099333 MsG0780036747.01.T01:CDS 20.0%
!!! GAAAAAAGTGTAAAGAAAAA+AGG + Chr7:13097845-13097864 None:intergenic 20.0%
!!! TATTCTAGAAAATTGATACT+TGG + Chr7:13097985-13098004 None:intergenic 20.0%
!!! TGTAGTTTTTTTTTCTTAAG+GGG + Chr7:13096882-13096901 None:intergenic 20.0%
!!! TTATTTTATTTTTTGCCTTG+GGG + Chr7:13096943-13096962 None:intergenic 20.0%
!!! TTTCATTTTCTTTTCTTATC+AGG - Chr7:13098552-13098571 MsG0780036747.01.T01:CDS 20.0%
! AAAAAAGTAGGAGATATCAA+AGG + Chr7:13098517-13098536 None:intergenic 25.0%
! AAAAAGGGTAAAGAGTTATA+CGG + Chr7:13097829-13097848 None:intergenic 25.0%
! AATAACAACAACATTAGCAA+TGG - Chr7:13096218-13096237 MsG0780036747.01.T01:CDS 25.0%
! ATTACTGTAATTTCGTCAAA+CGG - Chr7:13099039-13099058 MsG0780036747.01.T01:CDS 25.0%
! CCAATAATTGTCATTCTTAT+CGG + Chr7:13098435-13098454 None:intergenic 25.0%
! GACACAATATAAAAGGATAA+TGG - Chr7:13099363-13099382 MsG0780036747.01.T01:five_prime_UTR 25.0%
! TCAGGTCTAATATTGTAAAT+TGG - Chr7:13098255-13098274 MsG0780036747.01.T01:intron 25.0%
! TTAAAATTCATAAGGTTCGA+TGG + Chr7:13097215-13097234 None:intergenic 25.0%
! TTAACATCATTTCAGAAAGA+GGG + Chr7:13098910-13098929 None:intergenic 25.0%
! TTAGTGTATATTTGAAAGCA+CGG + Chr7:13099066-13099085 None:intergenic 25.0%
! TTGACGAAATTACAGTAATT+TGG + Chr7:13099038-13099057 None:intergenic 25.0%
! TTTAACATCATTTCAGAAAG+AGG + Chr7:13098911-13098930 None:intergenic 25.0%
! TTTCAAATTATTAACGGTGT+CGG - Chr7:13097768-13097787 MsG0780036747.01.T01:intron 25.0%
! TTTGAATTTGATATGCTTTG+TGG - Chr7:13097315-13097334 MsG0780036747.01.T01:intron 25.0%
!! AATCTACAGAAGTCAATTTT+GGG + Chr7:13098172-13098191 None:intergenic 25.0%
!! TTGTTATTGATGTTCTTTAG+AGG + Chr7:13096188-13096207 None:intergenic 25.0%
!! TTTTTCTTTTCTTTAGTGGA+AGG - Chr7:13097859-13097878 MsG0780036747.01.T01:intron 25.0%
!!! AATGGTTTGTTTGTCAATTT+TGG + Chr7:13095637-13095656 None:intergenic 25.0%
!!! CACTTTTTTCTTTTCTTTAG+TGG - Chr7:13097855-13097874 MsG0780036747.01.T01:intron 25.0%
!!! TATTTTATTTTTTGCCTTGG+GGG + Chr7:13096942-13096961 None:intergenic 25.0%
!!! TGTAGCTTTTAGAAAAATGA+CGG + Chr7:13099001-13099020 None:intergenic 25.0%
!!! TTGTTTTGTTTGCAATTGTT+TGG - Chr7:13096605-13096624 MsG0780036747.01.T01:intron 25.0%
!!! TTTTTCTAAAAGCTACACTT+TGG - Chr7:13099004-13099023 MsG0780036747.01.T01:CDS 25.0%
AAACAATTAGGTATGCTTCA+AGG - Chr7:13098761-13098780 MsG0780036747.01.T01:CDS 30.0%
AACTTCTGTAATTAGTGATG+TGG + Chr7:13098872-13098891 None:intergenic 30.0%
ACAGTATTAGTAGAAAGACT+TGG + Chr7:13099147-13099166 None:intergenic 30.0%
ACATCACTAATTACAGAAGT+TGG - Chr7:13098871-13098890 MsG0780036747.01.T01:CDS 30.0%
AGTGTTAAGGAAGTTCAAAT+AGG + Chr7:13095608-13095627 None:intergenic 30.0%
ATCGGTAAGAACATAAATCT+TGG + Chr7:13098417-13098436 None:intergenic 30.0%
CAACAACAACAAGATCATTA+TGG - Chr7:13096380-13096399 MsG0780036747.01.T01:CDS 30.0%
CATAATCAAGAGGGTAATAA+TGG - Chr7:13096242-13096261 MsG0780036747.01.T01:CDS 30.0%
CCGATAAGAATGACAATTAT+TGG - Chr7:13098432-13098451 MsG0780036747.01.T01:intron 30.0%
CTAATTACAGAAGTTGGATA+TGG - Chr7:13098877-13098896 MsG0780036747.01.T01:CDS 30.0%
CTCATCATGATGAGTATTAT+TGG + Chr7:13096351-13096370 None:intergenic 30.0%
GGACAAATTTCAAATCATGT+CGG + Chr7:13096790-13096809 None:intergenic 30.0%
GGATCGCAATATTTAAACAA+AGG - Chr7:13098276-13098295 MsG0780036747.01.T01:intron 30.0%
GTGCTTTCAAATATACACTA+AGG - Chr7:13099065-13099084 MsG0780036747.01.T01:CDS 30.0%
TAAGTGCATGTTTGAATTGA+TGG - Chr7:13098948-13098967 MsG0780036747.01.T01:CDS 30.0%
TACTACTAAAGTGGACAAAT+CGG - Chr7:13097158-13097177 MsG0780036747.01.T01:intron 30.0%
TATCCATGAGTGTATTACTT+TGG - Chr7:13099408-13099427 MsG0780036747.01.T01:five_prime_UTR 30.0%
TCAAACTCTTACTACTAAAG+TGG - Chr7:13097149-13097168 MsG0780036747.01.T01:intron 30.0%
TCAAATATACACTAAGGAGA+AGG - Chr7:13099071-13099090 MsG0780036747.01.T01:CDS 30.0%
TGATTTATCTCTGCTTAATC+TGG - Chr7:13097438-13097457 MsG0780036747.01.T01:intron 30.0%
TGTTTGCAATTGTTTGGAAA+GGG - Chr7:13096611-13096630 MsG0780036747.01.T01:intron 30.0%
TTACTGTAATTTCGTCAAAC+GGG - Chr7:13099040-13099059 MsG0780036747.01.T01:CDS 30.0%
TTGTTTGCAATTGTTTGGAA+AGG - Chr7:13096610-13096629 MsG0780036747.01.T01:intron 30.0%
! AAATGGTTGCAATTTTCTGT+TGG + Chr7:13099110-13099129 None:intergenic 30.0%
! AATAGGTCAATTGTTCCTTT+TGG + Chr7:13098640-13098659 None:intergenic 30.0%
! AGGTACAGAATTTTCAACTT+GGG - Chr7:13096456-13096475 MsG0780036747.01.T01:intron 30.0%
! ATCTACAGAAGTCAATTTTG+GGG + Chr7:13098171-13098190 None:intergenic 30.0%
! CAGAATCTTGGTTTGAAAAT+CGG - Chr7:13097267-13097286 MsG0780036747.01.T01:intron 30.0%
! CTTTTCCAAATTTGCGATTT+TGG + Chr7:13097091-13097110 None:intergenic 30.0%
! GAATCTACAGAAGTCAATTT+TGG + Chr7:13098173-13098192 None:intergenic 30.0%
! GATTTTCAAACCAAGATTCT+GGG + Chr7:13097268-13097287 None:intergenic 30.0%
!! TGGATTGTATGTTTGCTTTT+CGG - Chr7:13097458-13097477 MsG0780036747.01.T01:intron 30.0%
AAAGCTGGATTCAGTTACAA+TGG - Chr7:13096497-13096516 MsG0780036747.01.T01:intron 35.0%
AAATCTTGCTCCAACATTTG+TGG + Chr7:13095675-13095694 None:intergenic 35.0%
AAGTATCATGCTTTCTTGCT+AGG - Chr7:13097894-13097913 MsG0780036747.01.T01:intron 35.0%
ACTCAGAGTTTACTGATAAG+TGG - Chr7:13098219-13098238 MsG0780036747.01.T01:intron 35.0%
AGCAATGGTCATAATCAAGA+GGG - Chr7:13096233-13096252 MsG0780036747.01.T01:CDS 35.0%
ATGAAAATGAAGCTGCTTCA+TGG - Chr7:13096150-13096169 MsG0780036747.01.T01:CDS 35.0%
ATGAAACACGAAACACTCTT+CGG - Chr7:13097670-13097689 MsG0780036747.01.T01:intron 35.0%
ATGGAATATATTAACAGCGG+CGG + Chr7:13097523-13097542 None:intergenic 35.0%
ATTGTAACTGAATCCAGCTT+TGG + Chr7:13096498-13096517 None:intergenic 35.0%
CACAAGAATTGCAATCAACA+AGG + Chr7:13096304-13096323 None:intergenic 35.0%
CAGTTTCAATTAGTGCTACA+TGG - Chr7:13098461-13098480 MsG0780036747.01.T01:intron 35.0%
CTTGAAGCCATTTACTAGTA+CGG - Chr7:13098007-13098026 MsG0780036747.01.T01:intron 35.0%
GAATAGAAGGACCTGAAAAT+AGG + Chr7:13098657-13098676 None:intergenic 35.0%
GCTACAGTTGCAAAACTTAT+GGG + Chr7:13096911-13096930 None:intergenic 35.0%
GTTCCTCAAAAAAGCTATGT+GGG - Chr7:13096404-13096423 MsG0780036747.01.T01:CDS 35.0%
TAACCGGAAATTGGAAGAAT+CGG + Chr7:13096008-13096027 None:intergenic 35.0%
TAGCAATGGTCATAATCAAG+AGG - Chr7:13096232-13096251 MsG0780036747.01.T01:CDS 35.0%
TCAGGTTTCAGTTTCATCAA+TGG - Chr7:13098570-13098589 MsG0780036747.01.T01:CDS 35.0%
TCAGTTTCATCAATGGATGT+TGG - Chr7:13098577-13098596 MsG0780036747.01.T01:CDS 35.0%
TCTATCCATTGGAGAGAAAT+GGG + Chr7:13098689-13098708 None:intergenic 35.0%
TCTTTAGTGGAAGGAATCTA+AGG - Chr7:13097868-13097887 MsG0780036747.01.T01:intron 35.0%
TGCTACAGTTGCAAAACTTA+TGG + Chr7:13096912-13096931 None:intergenic 35.0%
TGGGAAGACATTTGAATAGA+AGG + Chr7:13098670-13098689 None:intergenic 35.0%
TGTTCCTCAAAAAAGCTATG+TGG - Chr7:13096403-13096422 MsG0780036747.01.T01:CDS 35.0%
TGTTGTTCCGTACTAGTAAA+TGG + Chr7:13098017-13098036 None:intergenic 35.0%
TGTTTGGAAAGGGTTGAAAT+TGG - Chr7:13096621-13096640 MsG0780036747.01.T01:intron 35.0%
TTCCTCAATACCAATTCAAG+AGG + Chr7:13096713-13096732 None:intergenic 35.0%
! ACAAGTACAAGTAGTGTTGA+AGG - Chr7:13098034-13098053 MsG0780036747.01.T01:intron 35.0%
! ACAGAATTTTCAACTTGGGT+TGG - Chr7:13096460-13096479 MsG0780036747.01.T01:intron 35.0%
! AGTGGACAAATCGGTATTTT+TGG - Chr7:13097167-13097186 MsG0780036747.01.T01:intron 35.0%
! ATTTTGGACAGACAGTGTTA+AGG + Chr7:13095621-13095640 None:intergenic 35.0%
! CAGGTACAGAATTTTCAACT+TGG - Chr7:13096455-13096474 MsG0780036747.01.T01:intron 35.0%
! CGATTTTCAAACCAAGATTC+TGG + Chr7:13097269-13097288 None:intergenic 35.0%
! CTTGAATTGGTATTGAGGAA+GGG - Chr7:13096713-13096732 MsG0780036747.01.T01:intron 35.0%
! CTTGTTGATTGCAATTCTTG+TGG - Chr7:13096302-13096321 MsG0780036747.01.T01:CDS 35.0%
! GGAACAATTGACCTATTTTC+AGG - Chr7:13098643-13098662 MsG0780036747.01.T01:CDS 35.0%
! TACTACAGTCACTTTGCAAT+AGG - Chr7:13098314-13098333 MsG0780036747.01.T01:intron 35.0%
! TAGCAAGAAAGCATGATACT+TGG + Chr7:13097895-13097914 None:intergenic 35.0%
! TCTACAGAAGTCAATTTTGG+GGG + Chr7:13098170-13098189 None:intergenic 35.0%
! TCTTGAATTGGTATTGAGGA+AGG - Chr7:13096712-13096731 MsG0780036747.01.T01:intron 35.0%
! TCTTTTTCTCTCTGTACCTT+AGG + Chr7:13098723-13098742 None:intergenic 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG - Chr7:13096916-13096935 MsG0780036747.01.T01:intron 35.0%
!! ACAACTTTTGAGTCCAACTA+TGG + Chr7:13097402-13097421 None:intergenic 35.0%
!! ATTTTGGGGGAATTAGATTC+TGG + Chr7:13098157-13098176 None:intergenic 35.0%
!! GATTGTATGTTTGCTTTTCG+GGG - Chr7:13097460-13097479 MsG0780036747.01.T01:intron 35.0%
!! GGATTGTATGTTTGCTTTTC+GGG - Chr7:13097459-13097478 MsG0780036747.01.T01:intron 35.0%
!! GGCGGTTTTGTAGTTTTTTT+GGG - Chr7:13097063-13097082 MsG0780036747.01.T01:intron 35.0%
!! TGAAGGTGTTGATCATGATA+TGG - Chr7:13096124-13096143 MsG0780036747.01.T01:CDS 35.0%
!!! CGGTTTTGTAGTTTTTTTGG+GGG - Chr7:13097065-13097084 MsG0780036747.01.T01:intron 35.0%
!!! GCGGTTTTGTAGTTTTTTTG+GGG - Chr7:13097064-13097083 MsG0780036747.01.T01:intron 35.0%
!!! TCGGTATTTTTGGTGTAAAC+CGG - Chr7:13097177-13097196 MsG0780036747.01.T01:intron 35.0%
AAAACAGCATGTCAGTCATG+TGG + Chr7:13097377-13097396 None:intergenic 40.0%
AACCGGAAATTGGAAGAATC+GGG + Chr7:13096007-13096026 None:intergenic 40.0%
ACAGTTGCAAAACTTATGGG+AGG + Chr7:13096908-13096927 None:intergenic 40.0%
ACCTATTCAAGACCTCCAAA+AGG - Chr7:13098622-13098641 MsG0780036747.01.T01:CDS 40.0%
ACTCTTGCTTCTCTATCCAT+TGG + Chr7:13098700-13098719 None:intergenic 40.0%
AGAGGCTCAAGATCTTGAAT+TGG + Chr7:13096695-13096714 None:intergenic 40.0%
AGATCTTGAGCCTCTTGAAT+TGG - Chr7:13096700-13096719 MsG0780036747.01.T01:intron 40.0%
AGCCTCTTGAATTGGTATTG+AGG - Chr7:13096708-13096727 MsG0780036747.01.T01:intron 40.0%
ATAGAGAAGCAAGAGTCCTA+AGG - Chr7:13098704-13098723 MsG0780036747.01.T01:CDS 40.0%
CATGCTTTCTTGCTAGGAAA+CGG - Chr7:13097900-13097919 MsG0780036747.01.T01:intron 40.0%
CCAATTTCCGGTTACCTTTA+CGG - Chr7:13096014-13096033 MsG0780036747.01.T01:three_prime_UTR 40.0%
CTCTATCCATTGGAGAGAAA+TGG + Chr7:13098690-13098709 None:intergenic 40.0%
GGTAAAGAGTTATACGGACA+TGG + Chr7:13097823-13097842 None:intergenic 40.0%
GTTGATTGCAATTCTTGTGG+TGG - Chr7:13096305-13096324 MsG0780036747.01.T01:CDS 40.0%
TAGATTCGAACCCAGAATCT+TGG - Chr7:13097255-13097274 MsG0780036747.01.T01:intron 40.0%
TCGCCAAAGTAATACACTCA+TGG + Chr7:13099414-13099433 None:intergenic 40.0%
TCTGGGTTCGAATCTAACTT+TGG + Chr7:13097251-13097270 None:intergenic 40.0%
TGCCACAGTTGCAAAACTTA+GGG - Chr7:13097040-13097059 MsG0780036747.01.T01:intron 40.0%
TTCATCTTCGGCACCTAAAA+GGG + Chr7:13096051-13096070 None:intergenic 40.0%
TTGGAAAGGGTTGAAATTGG+TGG - Chr7:13096624-13096643 MsG0780036747.01.T01:intron 40.0%
! AGGTCAATTGTTCCTTTTGG+AGG + Chr7:13098637-13098656 None:intergenic 40.0%
! ATCGCAACTTTGGGAAAGTT+AGG + Chr7:13096854-13096873 None:intergenic 40.0%
! CAAACATGCACTTAGTTCTC+TGG + Chr7:13098942-13098961 None:intergenic 40.0%
! CTTTCCCAAAGTTGCGATTT+TGG - Chr7:13096856-13096875 MsG0780036747.01.T01:intron 40.0%
! GAATAGGTCATGGTTGATTC+TGG + Chr7:13098610-13098629 None:intergenic 40.0%
! GTCAGTGTTTGAGTTCTATC+TGG - Chr7:13097794-13097813 MsG0780036747.01.T01:intron 40.0%
! TCGCAACTTTGGGAAAGTTA+GGG + Chr7:13096853-13096872 None:intergenic 40.0%
! TTTTGCAACTGTGGCAGTTT+TGG + Chr7:13097036-13097055 None:intergenic 40.0%
!! GGGCGGTTTTGTAGTTTTTT+TGG - Chr7:13097062-13097081 MsG0780036747.01.T01:intron 40.0%
!! TCCTTTTGGAGGTCTTGAAT+AGG + Chr7:13098626-13098645 None:intergenic 40.0%
!! TGGAGAAGTTGATGAGTACT+TGG - Chr7:13096277-13096296 MsG0780036747.01.T01:CDS 40.0%
!!! CATGCTGTTTTTGCCATAGT+TGG - Chr7:13097386-13097405 MsG0780036747.01.T01:intron 40.0%
!!! CGGTATTTTTGGTGTAAACC+GGG - Chr7:13097178-13097197 MsG0780036747.01.T01:intron 40.0%
!!! TATTTTTGGTGTAAACCGGG+TGG - Chr7:13097181-13097200 MsG0780036747.01.T01:intron 40.0%
!!! TCACCCACATAGCTTTTTTG+AGG + Chr7:13096410-13096429 None:intergenic 40.0%
AGAAAAATGACGGTGACACG+AGG + Chr7:13098991-13099010 None:intergenic 45.0%
AGCATGTCAGTCATGTGGAA+AGG + Chr7:13097372-13097391 None:intergenic 45.0%
AGCGTAGACCGAGTCAAAAT+TGG - Chr7:13097002-13097021 MsG0780036747.01.T01:intron 45.0%
AGTGGACAAGTCACTTGTTC+AGG - Chr7:13098237-13098256 MsG0780036747.01.T01:intron 45.0%
ATAAATATGCCGAGTCTGCG+CGG + Chr7:13095794-13095813 None:intergenic 45.0%
CACGAAACACTCTTCGGATT+AGG - Chr7:13097676-13097695 MsG0780036747.01.T01:intron 45.0%
CCACAGTTGCAAAACTTAGG+GGG - Chr7:13097042-13097061 MsG0780036747.01.T01:intron 45.0%
CCGTAAAGGTAACCGGAAAT+TGG + Chr7:13096017-13096036 None:intergenic 45.0%
CTCTGGTACACCTTGTACTT+TGG - Chr7:13097489-13097508 MsG0780036747.01.T01:intron 45.0%
CTGCCACAGTTGCAAAACTT+AGG - Chr7:13097039-13097058 MsG0780036747.01.T01:intron 45.0%
CTTCATCTTCGGCACCTAAA+AGG + Chr7:13096052-13096071 None:intergenic 45.0%
CTTTACAAAGAAAAGCCGCC+GGG + Chr7:13095905-13095924 None:intergenic 45.0%
GAGTTTGAGTCTTCCAAAGC+TGG - Chr7:13096482-13096501 MsG0780036747.01.T01:intron 45.0%
GCCACAGTTGCAAAACTTAG+GGG - Chr7:13097041-13097060 MsG0780036747.01.T01:intron 45.0%
GCTGGATTCAGTTACAATGG+TGG - Chr7:13096500-13096519 MsG0780036747.01.T01:intron 45.0%
GCTTTACAAAGAAAAGCCGC+CGG + Chr7:13095906-13095925 None:intergenic 45.0%
GGAAAGCCTATGCTGAAACT+CGG - Chr7:13098782-13098801 MsG0780036747.01.T01:CDS 45.0%
GGTGTAAGCTCCAAAGTACA+AGG + Chr7:13097502-13097521 None:intergenic 45.0%
GTCCCGATTCTTCCAATTTC+CGG - Chr7:13096002-13096021 MsG0780036747.01.T01:three_prime_UTR 45.0%
GTCTTCCCATTTCTCTCCAA+TGG - Chr7:13098681-13098700 MsG0780036747.01.T01:CDS 45.0%
GTGGATATCAGCATCACAAG+TGG + Chr7:13095949-13095968 None:intergenic 45.0%
TGCTCCAACATTTGTGGAGA+GGG + Chr7:13095669-13095688 None:intergenic 45.0%
TGGAGGTCTTGAATAGGTCA+TGG + Chr7:13098620-13098639 None:intergenic 45.0%
TGTACCTGCTGTTGTTGAAC+AGG + Chr7:13096443-13096462 None:intergenic 45.0%
TGTTCCTGTTCAACAACAGC+AGG - Chr7:13096436-13096455 MsG0780036747.01.T01:intron 45.0%
TTGCTCCAACATTTGTGGAG+AGG + Chr7:13095670-13095689 None:intergenic 45.0%
TTGGGGGAATTAGATTCTGG+AGG + Chr7:13098154-13098173 None:intergenic 45.0%
TTTACAAAGAAAAGCCGCCG+GGG + Chr7:13095904-13095923 None:intergenic 45.0%
! CGCAACTTTGGGAAAGTTAG+GGG + Chr7:13096852-13096871 None:intergenic 45.0%
! GCAACTTTGGGAAAGTTAGG+GGG + Chr7:13096851-13096870 None:intergenic 45.0%
! GCGAATCGACCTTTTATACG+CGG + Chr7:13098808-13098827 None:intergenic 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG - Chr7:13097009-13097028 MsG0780036747.01.T01:intron 45.0%
!! GCTTTTCGGGGTATTTTCTC+TGG - Chr7:13097472-13097491 MsG0780036747.01.T01:intron 45.0%
!!! CTTTTAGGTGCCGAAGATGA+AGG - Chr7:13096050-13096069 MsG0780036747.01.T01:three_prime_UTR 45.0%
!! AAAAAATTTATTATGTATAT+TGG + Chr7:13097944-13097963 None:intergenic 5.0%
AGGGGCCAAAATCGCAACTT+TGG + Chr7:13096864-13096883 None:intergenic 50.0%
ATCTTCGGCACCTAAAAGGG+TGG + Chr7:13096048-13096067 None:intergenic 50.0%
CAGTTGCAAAACTTAGGGGG+CGG - Chr7:13097045-13097064 MsG0780036747.01.T01:intron 50.0%
CTCCAACATTTGTGGAGAGG+GGG + Chr7:13095667-13095686 None:intergenic 50.0%
GAAACTCGGCCGCGTATAAA+AGG - Chr7:13098796-13098815 MsG0780036747.01.T01:CDS 50.0%
GAAGAATCGGGACACGTTGA+TGG + Chr7:13095995-13096014 None:intergenic 50.0%
GCCGACAAAGCCTTCATCTT+CGG + Chr7:13096063-13096082 None:intergenic 50.0%
GCTCCAACATTTGTGGAGAG+GGG + Chr7:13095668-13095687 None:intergenic 50.0%
GGGGCCAAAATCGCAACTTT+GGG + Chr7:13096863-13096882 None:intergenic 50.0%
GGGGGCCAAAATCGCAAATT+TGG - Chr7:13097083-13097102 MsG0780036747.01.T01:intron 50.0%
GTGGAAGAAGAGGAGGATGA+AGG - Chr7:13096107-13096126 MsG0780036747.01.T01:CDS 50.0%
GTGTCAGACACGAGATCTGT+CGG + Chr7:13097715-13097734 None:intergenic 50.0%
! CCCCCTAAGTTTTGCAACTG+TGG + Chr7:13097045-13097064 None:intergenic 50.0%
! GAAGATGAAGGCTTTGTCGG+CGG - Chr7:13096062-13096081 MsG0780036747.01.T01:three_prime_UTR 50.0%
! GACCGAGTCAAAATTGGCCT+TGG - Chr7:13097008-13097027 MsG0780036747.01.T01:intron 50.0%
! GCCGAAGATGAAGGCTTTGT+CGG - Chr7:13096059-13096078 MsG0780036747.01.T01:three_prime_UTR 50.0%
! GGGGAATTAGATTCTGGAGG+TGG + Chr7:13098151-13098170 None:intergenic 50.0%
! TCTTCGGATTAGGCGTGTCT+TGG - Chr7:13097686-13097705 MsG0780036747.01.T01:intron 50.0%
! TTGCAAGAGGGTTAGCAGAG+TGG + Chr7:13095968-13095987 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG - Chr7:13097010-13097029 MsG0780036747.01.T01:intron 50.0%
!! TCGATGGATTAGTCTCCACC+CGG + Chr7:13097199-13097218 None:intergenic 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG + Chr7:13097013-13097032 None:intergenic 50.0%
AGACACGTGGCACCTCACTT+AGG - Chr7:13096969-13096988 MsG0780036747.01.T01:intron 55.0%
CACAGCCACCATAAGGTCTG+CGG - Chr7:13095713-13095732 MsG0780036747.01.T01:three_prime_UTR 55.0%
CATAAGGTCTGCGGCAACGT+GGG - Chr7:13095722-13095741 MsG0780036747.01.T01:three_prime_UTR 55.0%
CTCCCCCTCTCCACAAATGT+TGG - Chr7:13095662-13095681 MsG0780036747.01.T01:three_prime_UTR 55.0%
CTGTGAGGTGGAAGAAGAGG+AGG - Chr7:13096100-13096119 MsG0780036747.01.T01:exon 55.0%
GACACGTGGCACCTCACTTA+GGG - Chr7:13096970-13096989 MsG0780036747.01.T01:intron 55.0%
GTGGATGCGTGCATCACAAG+CGG + Chr7:13095820-13095839 None:intergenic 55.0%
TGGAGAGGGGGAGTGATGAA+TGG + Chr7:13095655-13095674 None:intergenic 55.0%
TTGTGATGCACGCATCCACG+CGG - Chr7:13095821-13095840 MsG0780036747.01.T01:three_prime_UTR 55.0%
! GAATCGGGACACGTTGATGG+CGG + Chr7:13095992-13096011 None:intergenic 55.0%
!! GTTGATGGCGGCTTGCAAGA+GGG + Chr7:13095980-13095999 None:intergenic 55.0%
!! TGTAGCAGTTTTGGCCCCCA+AGG - Chr7:13096925-13096944 MsG0780036747.01.T01:intron 55.0%
ACGCGGCCGAGTTTCAGCAT+AGG + Chr7:13098791-13098810 None:intergenic 60.0%
CCACGTTGCCGCAGACCTTA+TGG + Chr7:13095724-13095743 None:intergenic 60.0%
CCATAAGGTCTGCGGCAACG+TGG - Chr7:13095721-13095740 MsG0780036747.01.T01:three_prime_UTR 60.0%
CCTCAGCCACAGCCACCATA+AGG - Chr7:13095706-13095725 MsG0780036747.01.T01:three_prime_UTR 60.0%
CCTTATGGTGGCTGTGGCTG+AGG + Chr7:13095709-13095728 None:intergenic 60.0%
CGCAGACCTTATGGTGGCTG+TGG + Chr7:13095715-13095734 None:intergenic 60.0%
CGGCTGTGAGGTGGAAGAAG+AGG - Chr7:13096097-13096116 MsG0780036747.01.T01:exon 60.0%
CGGGGGACCGTAAAGGTAAC+CGG + Chr7:13096024-13096043 None:intergenic 60.0%
CGGTTACCTTTACGGTCCCC+CGG - Chr7:13096022-13096041 MsG0780036747.01.T01:three_prime_UTR 60.0%
CGTTGCCGCAGACCTTATGG+TGG + Chr7:13095721-13095740 None:intergenic 60.0%
CTGACGTGGCACCCTAAGTG+AGG + Chr7:13096984-13097003 None:intergenic 60.0%
GTTCGTGCCTCGAGGCTACA+CGG + Chr7:13095851-13095870 None:intergenic 60.0%
TATGGTGGCTGTGGCTGAGG+TGG + Chr7:13095706-13095725 None:intergenic 60.0%
TCGGCACCTAAAAGGGTGGC+CGG + Chr7:13096044-13096063 None:intergenic 60.0%
! AGCATGTGACACGTGCCGCT+CGG - Chr7:13095749-13095768 MsG0780036747.01.T01:three_prime_UTR 60.0%
! GATGAAGGCTTTGTCGGCGG+TGG - Chr7:13096065-13096084 MsG0780036747.01.T01:three_prime_UTR 60.0%
! GGTTTTCTGCCGCGCAGACT+CGG - Chr7:13095782-13095801 MsG0780036747.01.T01:three_prime_UTR 60.0%
!! CGTTGATGGCGGCTTGCAAG+AGG + Chr7:13095981-13096000 None:intergenic 60.0%
!! CTGTGGCAGTTTTGGCCCCA+AGG + Chr7:13097028-13097047 None:intergenic 60.0%
!! TGACTCGGTCTACGCTGACG+TGG + Chr7:13096998-13097017 None:intergenic 60.0%
AGGCTACACGGTTTGCCGCG+TGG + Chr7:13095839-13095858 None:intergenic 65.0%
CGAACGCGTCTGGGTCTGTG+AGG - Chr7:13095866-13095885 MsG0780036747.01.T01:three_prime_UTR 65.0%
CGCGGCAGAAAACCGCGCAT+GGG + Chr7:13095776-13095795 None:intergenic 65.0%
CGGCAAACCGTGTAGCCTCG+AGG - Chr7:13095841-13095860 MsG0780036747.01.T01:three_prime_UTR 65.0%
CGGCACCTAAAAGGGTGGCC+GGG + Chr7:13096043-13096062 None:intergenic 65.0%
CTCGAGGCACGAACGCGTCT+GGG - Chr7:13095857-13095876 MsG0780036747.01.T01:three_prime_UTR 65.0%
GCACCTAAAAGGGTGGCCGG+GGG + Chr7:13096041-13096060 None:intergenic 65.0%
GCGGCAGAAAACCGCGCATG+GGG + Chr7:13095775-13095794 None:intergenic 65.0%
GGCACCTAAAAGGGTGGCCG+GGG + Chr7:13096042-13096061 None:intergenic 65.0%
TTTGTCGGCGGTGGTTGCGG+TGG - Chr7:13096074-13096093 MsG0780036747.01.T01:three_prime_UTR 65.0%
! CTGTGGCTGAGGTGGTGGTG+AGG + Chr7:13095698-13095717 None:intergenic 65.0%
! GGCTTTGTCGGCGGTGGTTG+CGG - Chr7:13096071-13096090 MsG0780036747.01.T01:three_prime_UTR 65.0%
AAACCGCGCATGGGGCCGAG+CGG + Chr7:13095767-13095786 None:intergenic 70.0%
CCAGACGCGTTCGTGCCTCG+AGG + Chr7:13095859-13095878 None:intergenic 70.0%
CCTCGAGGCACGAACGCGTC+TGG - Chr7:13095856-13095875 MsG0780036747.01.T01:three_prime_UTR 70.0%
GCGCGGCAGAAAACCGCGCA+TGG + Chr7:13095777-13095796 None:intergenic 70.0%
GGTGGCTGTGGCTGAGGTGG+TGG + Chr7:13095703-13095722 None:intergenic 70.0%
! GGTCCCCCGGCCACCCTTTT+AGG - Chr7:13096035-13096054 MsG0780036747.01.T01:three_prime_UTR 70.0%
! TGGTTGCGGTGGCGGCTGTG+AGG - Chr7:13096085-13096104 MsG0780036747.01.T01:exon 70.0%
! TTGCGGTGGCGGCTGTGAGG+TGG - Chr7:13096088-13096107 MsG0780036747.01.T01:exon 70.0%
GGGTGGCCGGGGGACCGTAA+AGG + Chr7:13096031-13096050 None:intergenic 75.0%
GTCGGCGGTGGTTGCGGTGG+CGG - Chr7:13096077-13096096 MsG0780036747.01.T01:three_prime_UTR 75.0%
TGAGGCCTGCGAGCGTGCCC+CGG - Chr7:13095884-13095903 MsG0780036747.01.T01:three_prime_UTR 75.0%
!! GTGCCGCTCGGCCCCATGCG+CGG - Chr7:13095761-13095780 MsG0780036747.01.T01:three_prime_UTR 80.0%
! AGCCGCCGGGGCACGCTCGC+AGG + Chr7:13095892-13095911 None:intergenic 85.0%
! GGCCTGCGAGCGTGCCCCGG+CGG - Chr7:13095887-13095906 MsG0780036747.01.T01:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 13095576 13099444 13095576 ID=MsG0780036747.01;Name=MsG0780036747.01
Chr7 mRNA 13095576 13099444 13095576 ID=MsG0780036747.01.T01;Parent=MsG0780036747.01;Name=MsG0780036747.01.T01;_AED=0.27;_eAED=0.27;_QI=102|1|1|1|1|1|2|526|401
Chr7 exon 13095576 13096446 13095576 ID=MsG0780036747.01.T01:exon:1881;Parent=MsG0780036747.01.T01
Chr7 exon 13098482 13099444 13098482 ID=MsG0780036747.01.T01:exon:1880;Parent=MsG0780036747.01.T01
Chr7 five_prime_UTR 13099343 13099444 13099343 ID=MsG0780036747.01.T01:five_prime_utr;Parent=MsG0780036747.01.T01
Chr7 CDS 13098482 13099342 13098482 ID=MsG0780036747.01.T01:cds;Parent=MsG0780036747.01.T01
Chr7 CDS 13096102 13096446 13096102 ID=MsG0780036747.01.T01:cds;Parent=MsG0780036747.01.T01
Chr7 three_prime_UTR 13095576 13096101 13095576 ID=MsG0780036747.01.T01:three_prime_utr;Parent=MsG0780036747.01.T01
Gene Sequence

>MsG0780036747.01.T01

ATGTTGGAGCAAGATTTCCTCACCACCACCTCAGCCACAGCCACCATAAGGTCTGCGGCAACGTGGGCACGAGCATGTGACACGTGCCGCTCGGCCCCATGCGCGGTTTTCTGCCGCGCAGACTCGGCATATTTATGTGCCGCTTGTGATGCACGCATCCACGCGGCAAACCGTGTAGCCTCGAGGCACGAACGCGTCTGGGTCTGTGAGGCCTGCGAGCGTGCCCCGGCGGCTTTTCTTTGTAAAGCTGATGCTGCTTCTCTTTGCTCCACTTGTGATGCTGATATCCACTCTGCTAACCCTCTTGCAAGCCGCCATCAACGTGTCCCGATTCTTCCAATTTCCGGTTACCTTTACGGTCCCCCGGCCACCCTTTTAGGTGCCGAAGATGAAGGCTTTGTCGGCGGTGGTTGCGGTGGCGGCTGTGAGGTGGAAGAAGAGGAGGATGAAGGTGTTGATCATGATATGGAAGATGAAAATGAAGCTGCTTCATGGCTTTTGTTGAATCCTCTAAAGAACATCAATAACAATAGTAACAACAATAACAACAACATTAGCAATGGTCATAATCAAGAGGGTAATAATGGATTTTTGTTTAGTGGAGAAGTTGATGAGTACTTGGACCTTGTTGATTGCAATTCTTGTGGTGGTGATGAAAACACTTTCAATACCAATAATACTCATCATGATGAGTATAGTCAACAACAACAACAAGATCATTATGGTGTTCCTCAAAAAAGCTATGTGGGTGATAGTGTTGTTCCTGTTCAACAACAGCAGGTACAGAATTTTCAACTTGGGTTGGAGTTTGAGTCTTCCAAAGCTGGATTCAGTTACAATGGTGGTTCTATTAGTCAAAGTGTTTCAGTTTCATCAATGGATGTTGGTGTTGTACCAGAATCAACCATGACCTATTCAAGACCTCCAAAAGGAACAATTGACCTATTTTCAGGTCCTTCTATTCAAATGTCTTCCCATTTCTCTCCAATGGATAGAGAAGCAAGAGTCCTAAGGTACAGAGAGAAAAAGAAGACAAGAAAATTTGAGAAAACAATTAGGTATGCTTCAAGGAAAGCCTATGCTGAAACTCGGCCGCGTATAAAAGGTCGATTCGCGAAGAGAACAGATGTAGAAGCTGAAGTTGATCAAATGTTTTCCACATCACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGA

Protein sequence

>MsG0780036747.01.T01

MLEQDFLTTTSATATIRSAATWARACDTCRSAPCAVFCRADSAYLCAACDARIHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSTCDADIHSANPLASRHQRVPILPISGYLYGPPATLLGAEDEGFVGGGCGGGCEVEEEEDEGVDHDMEDENEAASWLLLNPLKNINNNSNNNNNNISNGHNQEGNNGFLFSGEVDEYLDLVDCNSCGGDENTFNTNNTHHDEYSQQQQQDHYGVPQKSYVGDSVVPVQQQQVQNFQLGLEFESSKAGFSYNGGSISQSVSVSSMDVGVVPESTMTYSRPPKGTIDLFSGPSIQMSSHFSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTSLITEVGYGIVPSF*