Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002020 | XP_003588379.2 | 97.375 | 381 | 4 | 1 | 1 | 375 | 208 | 588 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002020 | sp|Q9FFN2|GLYT3_ARATH | 44.156 | 385 | 195 | 6 | 2 | 370 | 131 | 511 | 2.94e-103 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002020 | G7IB43 | 97.375 | 381 | 4 | 1 | 1 | 375 | 208 | 588 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002020 | Msa0058730 | 0.915492 | 5.517140e-85 | -8.615850e-47 |
| Msa0002020 | Msa0103620 | 0.810931 | 9.016286e-51 | -8.615850e-47 |
| Msa0002020 | Msa0103640 | 0.930463 | 1.580238e-93 | -8.615850e-47 |
| Msa0002020 | Msa0149990 | 0.929425 | 7.082257e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002020 | MtrunA17_Chr1g0146181 | 97.375 | 381 | 4 | 1 | 1 | 375 | 208 | 588 | 0.0 | 774 |
| Msa0002020 | MtrunA17_Chr3g0140131 | 79.790 | 381 | 71 | 1 | 1 | 375 | 215 | 595 | 0.0 | 646 |
| Msa0002020 | MtrunA17_Chr7g0265381 | 78.075 | 374 | 76 | 1 | 8 | 375 | 2 | 375 | 0.0 | 616 |
| Msa0002020 | MtrunA17_Chr8g0390121 | 65.963 | 379 | 122 | 2 | 1 | 372 | 230 | 608 | 0.0 | 535 |
| Msa0002020 | MtrunA17_Chr3g0140141 | 64.096 | 376 | 129 | 1 | 2 | 371 | 174 | 549 | 0.0 | 533 |
| Msa0002020 | MtrunA17_Chr1g0197381 | 62.772 | 368 | 125 | 3 | 10 | 370 | 182 | 544 | 7.89e-170 | 485 |
| Msa0002020 | MtrunA17_Chr4g0055991 | 59.140 | 372 | 140 | 4 | 11 | 370 | 161 | 532 | 2.50e-156 | 450 |
| Msa0002020 | MtrunA17_Chr7g0265451 | 45.573 | 384 | 189 | 6 | 3 | 370 | 132 | 511 | 1.03e-112 | 338 |
| Msa0002020 | MtrunA17_Chr7g0265461 | 44.974 | 378 | 191 | 5 | 6 | 370 | 21 | 394 | 3.39e-109 | 325 |
| Msa0002020 | MtrunA17_Chr3g0131051 | 43.536 | 379 | 193 | 5 | 9 | 370 | 113 | 487 | 5.32e-109 | 328 |
| Msa0002020 | MtrunA17_Chr3g0120131 | 43.814 | 388 | 193 | 5 | 4 | 370 | 95 | 478 | 2.18e-101 | 308 |
| Msa0002020 | MtrunA17_Chr1g0179651 | 45.133 | 339 | 172 | 5 | 42 | 370 | 1 | 335 | 2.26e-99 | 298 |
| Msa0002020 | MtrunA17_Chr3g0119721 | 45.808 | 334 | 168 | 4 | 46 | 370 | 11 | 340 | 4.17e-96 | 290 |
| Msa0002020 | MtrunA17_Chr3g0137491 | 44.282 | 341 | 176 | 5 | 41 | 370 | 50 | 387 | 2.15e-91 | 280 |
| Msa0002020 | MtrunA17_Chr4g0064471 | 39.740 | 385 | 205 | 7 | 9 | 370 | 86 | 466 | 3.95e-87 | 271 |
| Msa0002020 | MtrunA17_Chr4g0064411 | 39.793 | 387 | 200 | 8 | 9 | 370 | 80 | 458 | 2.50e-83 | 261 |
| Msa0002020 | MtrunA17_Chr4g0064461 | 37.047 | 386 | 213 | 10 | 9 | 370 | 82 | 461 | 3.15e-75 | 240 |
| Msa0002020 | MtrunA17_Chr5g0411991 | 34.682 | 346 | 203 | 9 | 33 | 366 | 73 | 407 | 4.76e-70 | 225 |
| Msa0002020 | MtrunA17_Chr7g0253441 | 34.551 | 356 | 191 | 11 | 36 | 369 | 141 | 476 | 1.92e-57 | 194 |
| Msa0002020 | MtrunA17_Chr5g0421571 | 33.032 | 221 | 126 | 8 | 33 | 242 | 126 | 335 | 2.14e-31 | 121 |
| Msa0002020 | MtrunA17_Chr8g0385671 | 27.273 | 352 | 201 | 14 | 53 | 365 | 49 | 384 | 1.54e-24 | 103 |
| Msa0002020 | MtrunA17_Chr8g0385651 | 26.836 | 354 | 200 | 15 | 53 | 365 | 49 | 384 | 2.13e-23 | 100 |
| Msa0002020 | MtrunA17_Chr7g0254391 | 27.946 | 297 | 172 | 11 | 95 | 365 | 190 | 470 | 5.19e-18 | 85.5 |
| Msa0002020 | MtrunA17_Chr4g0028201 | 26.616 | 263 | 154 | 8 | 135 | 365 | 189 | 444 | 1.53e-17 | 84.0 |
| Msa0002020 | MtrunA17_Chr2g0320251 | 25.000 | 316 | 179 | 11 | 50 | 324 | 85 | 383 | 4.80e-17 | 82.4 |
| Msa0002020 | MtrunA17_Chr3g0092341 | 25.256 | 293 | 188 | 8 | 94 | 365 | 188 | 470 | 9.51e-17 | 81.6 |
| Msa0002020 | MtrunA17_Chr6g0460631 | 26.351 | 296 | 180 | 10 | 94 | 365 | 184 | 465 | 1.91e-16 | 80.9 |
| Msa0002020 | MtrunA17_Chr4g0043801 | 24.333 | 300 | 177 | 10 | 96 | 366 | 163 | 441 | 4.13e-15 | 76.6 |
| Msa0002020 | MtrunA17_Chr3g0122631 | 23.333 | 300 | 182 | 9 | 96 | 365 | 119 | 400 | 9.19e-15 | 75.1 |
| Msa0002020 | MtrunA17_Chr1g0159421 | 26.727 | 333 | 193 | 15 | 48 | 343 | 68 | 386 | 4.54e-13 | 70.1 |
| Msa0002020 | MtrunA17_Chr8g0377331 | 23.547 | 327 | 192 | 13 | 76 | 365 | 93 | 398 | 7.95e-13 | 69.3 |
| Msa0002020 | MtrunA17_Chr1g0200871 | 24.012 | 329 | 183 | 13 | 76 | 349 | 115 | 431 | 1.84e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002020 | AT5G25820.1 | 70.185 | 379 | 104 | 4 | 2 | 371 | 272 | 650 | 0.0 | 566 |
| Msa0002020 | AT4G32790.1 | 67.725 | 378 | 115 | 2 | 1 | 371 | 214 | 591 | 0.0 | 553 |
| Msa0002020 | AT4G32790.3 | 67.725 | 378 | 115 | 2 | 1 | 371 | 214 | 591 | 0.0 | 553 |
| Msa0002020 | AT4G32790.2 | 67.725 | 378 | 115 | 2 | 1 | 371 | 214 | 591 | 0.0 | 553 |
| Msa0002020 | AT5G19670.1 | 66.579 | 380 | 120 | 2 | 1 | 373 | 228 | 607 | 0.0 | 543 |
| Msa0002020 | AT5G19670.2 | 66.579 | 380 | 120 | 2 | 1 | 373 | 228 | 607 | 0.0 | 543 |
| Msa0002020 | AT5G11610.1 | 61.880 | 383 | 132 | 5 | 1 | 373 | 167 | 545 | 4.19e-173 | 494 |
| Msa0002020 | AT5G37000.1 | 60.372 | 376 | 141 | 3 | 2 | 370 | 174 | 548 | 7.07e-167 | 478 |
| Msa0002020 | AT4G16745.1 | 58.108 | 370 | 143 | 4 | 11 | 368 | 157 | 526 | 1.09e-153 | 444 |
| Msa0002020 | AT4G16745.2 | 56.667 | 360 | 144 | 4 | 11 | 358 | 157 | 516 | 3.75e-142 | 416 |
| Msa0002020 | AT5G11610.2 | 58.156 | 282 | 105 | 4 | 1 | 273 | 167 | 444 | 1.00e-113 | 339 |
| Msa0002020 | AT5G03795.1 | 44.156 | 385 | 195 | 6 | 2 | 370 | 131 | 511 | 2.99e-104 | 317 |
| Msa0002020 | AT5G25310.1 | 44.094 | 381 | 188 | 9 | 9 | 370 | 101 | 475 | 9.25e-95 | 291 |
| Msa0002020 | AT3G07620.1 | 42.147 | 382 | 197 | 5 | 9 | 370 | 77 | 454 | 9.33e-94 | 288 |
| Msa0002020 | AT5G20260.2 | 38.845 | 381 | 210 | 7 | 9 | 370 | 85 | 461 | 7.96e-85 | 265 |
| Msa0002020 | AT5G11130.1 | 40.805 | 348 | 191 | 6 | 34 | 370 | 129 | 472 | 2.23e-83 | 262 |
| Msa0002020 | AT5G20260.3 | 40.882 | 340 | 185 | 5 | 43 | 370 | 21 | 356 | 5.11e-83 | 257 |
| Msa0002020 | AT5G20260.1 | 41.141 | 333 | 180 | 5 | 50 | 370 | 1 | 329 | 1.26e-82 | 255 |
| Msa0002020 | AT5G11130.2 | 41.265 | 332 | 180 | 6 | 50 | 370 | 1 | 328 | 2.21e-81 | 252 |
| Msa0002020 | AT3G42180.1 | 38.873 | 355 | 195 | 5 | 34 | 370 | 114 | 464 | 2.98e-81 | 256 |
| Msa0002020 | AT3G42180.4 | 38.938 | 339 | 185 | 5 | 50 | 370 | 1 | 335 | 1.84e-79 | 248 |
| Msa0002020 | AT5G33290.1 | 39.276 | 359 | 194 | 7 | 31 | 370 | 141 | 494 | 3.51e-79 | 252 |
| Msa0002020 | AT4G38040.1 | 36.705 | 346 | 196 | 9 | 33 | 366 | 83 | 417 | 7.09e-71 | 228 |
| Msa0002020 | AT5G11610.3 | 61.392 | 158 | 59 | 1 | 1 | 156 | 167 | 324 | 1.65e-65 | 212 |
| Msa0002020 | AT4G38040.2 | 34.347 | 329 | 190 | 10 | 33 | 346 | 83 | 400 | 1.48e-57 | 193 |
| Msa0002020 | AT1G27440.1 | 26.420 | 352 | 204 | 14 | 53 | 365 | 45 | 380 | 1.80e-23 | 101 |
| Msa0002020 | AT5G61840.1 | 26.705 | 352 | 203 | 14 | 53 | 365 | 48 | 383 | 2.02e-23 | 101 |
| Msa0002020 | AT1G67410.1 | 26.140 | 329 | 200 | 12 | 70 | 365 | 88 | 406 | 3.34e-18 | 85.9 |
| Msa0002020 | AT2G28110.1 | 21.785 | 381 | 219 | 13 | 2 | 338 | 58 | 403 | 1.35e-16 | 81.3 |
| Msa0002020 | AT5G22940.1 | 25.484 | 310 | 180 | 10 | 94 | 366 | 153 | 448 | 5.66e-16 | 79.7 |
| Msa0002020 | AT5G22940.2 | 25.484 | 310 | 180 | 10 | 94 | 366 | 182 | 477 | 8.62e-16 | 79.0 |
| Msa0002020 | AT3G45400.1 | 25.517 | 290 | 186 | 7 | 96 | 365 | 157 | 436 | 9.09e-15 | 75.9 |
| Msa0002020 | AT3G03650.1 | 25.175 | 286 | 197 | 6 | 94 | 366 | 194 | 475 | 1.61e-14 | 75.1 |
| Msa0002020 | AT1G21480.1 | 23.988 | 346 | 212 | 13 | 54 | 362 | 89 | 420 | 1.52e-13 | 72.0 |
| Msa0002020 | AT2G35100.1 | 25.342 | 292 | 185 | 10 | 96 | 365 | 130 | 410 | 2.75e-13 | 71.2 |
| Msa0002020 | AT1G74680.1 | 26.394 | 269 | 175 | 9 | 95 | 346 | 151 | 413 | 2.17e-12 | 68.6 |
| Msa0002020 | AT1G21480.2 | 24.915 | 293 | 170 | 12 | 54 | 310 | 89 | 367 | 4.59e-12 | 67.4 |
| Msa0002020 | AT1G34270.1 | 28.902 | 173 | 109 | 5 | 184 | 349 | 259 | 424 | 9.89e-12 | 66.6 |
Find 77 sgRNAs with CRISPR-Local
Find 526 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCGGCGAGACATTCTTTC+TGG | 0.164104 | 1_1:+3878049 | Msa0002020:CDS |
| ATATGATCCTTCACTCTATT+TGG | 0.169874 | 1_1:+3879317 | Msa0002020:CDS |
| TTTACTTACCTTTCAGTTCT+AGG | 0.170050 | 1_1:+3877944 | Msa0002020:CDS |
| AAGAATGATCCAAATCTTTA+TGG | 0.195262 | 1_1:+3877404 | Msa0002020:CDS |
| GGAAAATTGCCAAAGGTTAA+AGG | 0.228106 | 1_1:+3878971 | Msa0002020:CDS |
| CCAATCCAAAACCTCGAAAA+AGG | 0.233899 | 1_1:-3879134 | None:intergenic |
| ATGGAAACATTATGATAAAT+TGG | 0.239209 | 1_1:-3877428 | None:intergenic |
| TTTCAGGAGCTATGAATTAA+TGG | 0.250482 | 1_1:+3877765 | Msa0002020:intron |
| GTGTATATCTTTGGAGGTTT+GGG | 0.253031 | 1_1:+3879483 | Msa0002020:three_prime_UTR |
| TAAAACAGATGAGCCTTCTT+TGG | 0.253536 | 1_1:-3877925 | None:intergenic |
| TGTGTATATCTTTGGAGGTT+TGG | 0.266492 | 1_1:+3879482 | Msa0002020:three_prime_UTR |
| ATGCATGCTCCCTGCGAAAA+AGG | 0.268698 | 1_1:-3878885 | None:intergenic |
| GCGTTTCGGACGTATGTTTC+AGG | 0.278879 | 1_1:-3878806 | None:intergenic |
| AATTCAAAGTGACTTTATTA+AGG | 0.287966 | 1_1:-3879506 | None:intergenic |
| TGTGAATTTGTGTATATCTT+TGG | 0.312781 | 1_1:+3879474 | Msa0002020:three_prime_UTR |
| TAAATTGGACCATAAAGATT+TGG | 0.346934 | 1_1:-3877413 | None:intergenic |
| TTTGGATCATTCTTTACAAT+TGG | 0.380163 | 1_1:-3877395 | None:intergenic |
| GGTATCTAAGCATGCTTATG+AGG | 0.380545 | 1_1:+3879233 | Msa0002020:CDS |
| CATTCTTTCTGGAACAGAAC+TGG | 0.382167 | 1_1:+3878060 | Msa0002020:CDS |
| TTACTGTTTCCTTTAACCTT+TGG | 0.391535 | 1_1:-3878980 | None:intergenic |
| TCCCAATGTTTCAATAGTAT+TGG | 0.397546 | 1_1:-3878920 | None:intergenic |
| AAAATTGCTTCCACGACTCT+TGG | 0.401803 | 1_1:-3879067 | None:intergenic |
| AAAACAGATGAGCCTTCTTT+GGG | 0.402028 | 1_1:-3877924 | None:intergenic |
| AAGTACTGTATTTGTGCAAA+AGG | 0.404759 | 1_1:+3879028 | Msa0002020:CDS |
| TTGTTGGAATTTGAGCGTTT+CGG | 0.415130 | 1_1:-3878820 | None:intergenic |
| GCAGTTCGCCAATCGTAGTT+TGG | 0.417691 | 1_1:-3878720 | None:intergenic |
| AAGAATGTCTCGCCGCAATC+AGG | 0.432014 | 1_1:-3878044 | None:intergenic |
| AGGTACAGAAGCATTTCCTT+TGG | 0.434501 | 1_1:+3879263 | Msa0002020:CDS |
| TACGATTGGCGAACTGCATA+AGG | 0.436363 | 1_1:+3878726 | Msa0002020:CDS |
| CTCTTCTATGCAGGCTCCAT+CGG | 0.442496 | 1_1:+3878694 | Msa0002020:intron |
| CAAATTCCAACAAGGGATCT+TGG | 0.446305 | 1_1:+3878830 | Msa0002020:CDS |
| GCCAATACTATTGAAACATT+GGG | 0.446619 | 1_1:+3878919 | Msa0002020:CDS |
| CTTGAAGATAAAGTAGGAAC+AGG | 0.452481 | 1_1:+3879374 | Msa0002020:three_prime_UTR |
| GTAAAAGAAGGATTTGTCTT+CGG | 0.456224 | 1_1:+3878767 | Msa0002020:CDS |
| TTCTGTCATTGTTCTGGAGA+AGG | 0.459845 | 1_1:+3879165 | Msa0002020:CDS |
| TACTTTCTATTCCAGAAAAG+AGG | 0.465367 | 1_1:+3879212 | Msa0002020:CDS |
| GATCCTGACATGAAAATCTT+CGG | 0.466006 | 1_1:+3878950 | Msa0002020:CDS |
| GGCCAATACTATTGAAACAT+TGG | 0.469555 | 1_1:+3878918 | Msa0002020:CDS |
| AAATTATCAGATATAATAAC+CGG | 0.469771 | 1_1:-3879103 | None:intergenic |
| GCATAGATTCCGGTGAGAAA+CGG | 0.474338 | 1_1:-3877844 | None:intergenic |
| GAATTTGTGTATATCTTTGG+AGG | 0.484052 | 1_1:+3879477 | Msa0002020:three_prime_UTR |
| CTGCATTCGCCGTTTCTCAC+CGG | 0.484618 | 1_1:+3877835 | Msa0002020:CDS |
| TTGCCACCAAGATCCCTTGT+TGG | 0.484877 | 1_1:-3878836 | None:intergenic |
| CTCCAGAACAATGACAGAAA+AGG | 0.491004 | 1_1:-3879161 | None:intergenic |
| AATCGTAGTTTGGTTTCCGA+TGG | 0.498915 | 1_1:-3878710 | None:intergenic |
| AGAAACGGCGAATGCAGTAT+AGG | 0.502439 | 1_1:-3877829 | None:intergenic |
| GGAGCATGCATGGTTATGTA+AGG | 0.512586 | 1_1:+3878897 | Msa0002020:CDS |
| TGACAGGATTCTTGTTCCAA+AGG | 0.530529 | 1_1:-3879279 | None:intergenic |
| CCCTTCAGAAGCATAGATTC+CGG | 0.536340 | 1_1:-3877854 | None:intergenic |
| TGAAATATATCATACTTGAC+AGG | 0.536585 | 1_1:-3879295 | None:intergenic |
| ATGCGAATTCTTCACATACA+AGG | 0.538204 | 1_1:-3877980 | None:intergenic |
| ATCGGAAACCAAACTACGAT+TGG | 0.542015 | 1_1:+3878712 | Msa0002020:CDS |
| AGTACTGTATTTGTGCAAAA+GGG | 0.542312 | 1_1:+3879029 | Msa0002020:CDS |
| ACCGGAATCTATGCTTCTGA+AGG | 0.545542 | 1_1:+3877853 | Msa0002020:CDS |
| AGATAACTTGAAGATAAAGT+AGG | 0.551404 | 1_1:+3879368 | Msa0002020:exon |
| TGCAACGCCGATGTAAAAGA+AGG | 0.554573 | 1_1:+3878755 | Msa0002020:CDS |
| AGGGTGGTTTATGAAGCTAA+TGG | 0.555086 | 1_1:+3877873 | Msa0002020:CDS |
| GATATTGAATCAAGTTCTTG+TGG | 0.555739 | 1_1:-3878005 | None:intergenic |
| TGAGTAATACCTCTTGAACA+TGG | 0.569127 | 1_1:-3877447 | None:intergenic |
| TGTTGATCAAGAGTTACTAC+AGG | 0.570250 | 1_1:+3877349 | Msa0002020:CDS |
| ATAATGTTTCCATGTTCAAG+AGG | 0.579284 | 1_1:+3877438 | Msa0002020:CDS |
| TCTTCAAGTTATCTAGCTAG+TGG | 0.584802 | 1_1:-3879359 | None:intergenic |
| GAATCTATGCTTCTGAAGGG+TGG | 0.610066 | 1_1:+3877857 | Msa0002020:CDS |
| TTTCAGTTCTAGGATGCTAG+AGG | 0.611661 | 1_1:+3877954 | Msa0002020:CDS |
| GTATCTAAGCATGCTTATGA+GGG | 0.611871 | 1_1:+3879234 | Msa0002020:CDS |
| TCTAGCATCCTAGAACTGAA+AGG | 0.616743 | 1_1:-3877952 | None:intergenic |
| ATTCCAACAAGGGATCTTGG+TGG | 0.620085 | 1_1:+3878833 | Msa0002020:CDS |
| AAAGTGTATGTATACAGAGA+AGG | 0.623220 | 1_1:+3877799 | Msa0002020:CDS |
| AGTGAATAGTCCAAGAGTCG+TGG | 0.626623 | 1_1:+3879057 | Msa0002020:CDS |
| AATCTTCGGAAAATTGCCAA+AGG | 0.640718 | 1_1:+3878964 | Msa0002020:CDS |
| TATTGTACCAAATAGAGTGA+AGG | 0.643007 | 1_1:-3879324 | None:intergenic |
| GAAACGCTCAAATTCCAACA+AGG | 0.653680 | 1_1:+3878822 | Msa0002020:CDS |
| CCGGAATCTATGCTTCTGAA+GGG | 0.655733 | 1_1:+3877854 | Msa0002020:CDS |
| TCAACATTTGAAAACCACCT+CGG | 0.656673 | 1_1:-3877332 | None:intergenic |
| TCTTTCTGGAACAGAACTGG+AGG | 0.657177 | 1_1:+3878063 | Msa0002020:CDS |
| AAACGCTCAAATTCCAACAA+GGG | 0.666050 | 1_1:+3878823 | Msa0002020:CDS |
| TGATTATGTAGACCTGATTG+CGG | 0.677519 | 1_1:+3878032 | Msa0002020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAACTAAAATCATTTT+CGG | + | chr1_1:3875692-3875711 | Msa0002020:intron | 10.0% |
| !!! | NNNNNNNNNNATGAAAGTAT+TGG | - | chr1_1:3877150-3877169 | None:intergenic | 10.0% |
| !!! | TATTAAACTAAAATCATTTT+CGG | + | chr1_1:3875692-3875711 | Msa0002020:intron | 10.0% |
| !!! | NNNNNNNNNNATGAAAGTAT+TGG | - | chr1_1:3877150-3877169 | None:intergenic | 10.0% |
| !! | AATGTGATATTTGATTAAAT+GGG | - | chr1_1:3875618-3875637 | None:intergenic | 15.0% |
| !! | AAATGTGATATTTGATTAAA+TGG | - | chr1_1:3875619-3875638 | None:intergenic | 15.0% |
| !! | TACCAAATTTAAAAACAAAT+AGG | + | chr1_1:3875927-3875946 | Msa0002020:intron | 15.0% |
| !!! | AACCTATTTGTTTTTAAATT+TGG | - | chr1_1:3875932-3875951 | None:intergenic | 15.0% |
| !!! | TACATAATTTAAAACCAAAT+AGG | + | chr1_1:3876218-3876237 | Msa0002020:intron | 15.0% |
| !! | ATGATATATATGAAAACTAT+TGG | - | chr1_1:3876384-3876403 | None:intergenic | 15.0% |
| !!! | TTGATTTAAAACTTGATATT+TGG | - | chr1_1:3876618-3876637 | None:intergenic | 15.0% |
| !!! | AAATATCAAGTTTTAAATCA+AGG | + | chr1_1:3876617-3876636 | Msa0002020:intron | 15.0% |
| !!! | AATATCAAGTTTTAAATCAA+GGG | + | chr1_1:3876618-3876637 | Msa0002020:intron | 15.0% |
| !!! | TACAATTTTGATAAATATGA+AGG | - | chr1_1:3876664-3876683 | None:intergenic | 15.0% |
| !! | TAAAAGTTTGATAAATATGA+AGG | - | chr1_1:3876961-3876980 | None:intergenic | 15.0% |
| !!! | TATCAAACTTTTAATCATAT+AGG | + | chr1_1:3876968-3876987 | Msa0002020:intron | 15.0% |
| !!! | TACCTTATTTAAAACAAAAT+AGG | + | chr1_1:3877035-3877054 | Msa0002020:intron | 15.0% |
| !!! | AACCTATTTTGTTTTAAATA+AGG | - | chr1_1:3877040-3877059 | None:intergenic | 15.0% |
| !!! | TTTTTTTACCATACATATTA+AGG | - | chr1_1:3878202-3878221 | None:intergenic | 15.0% |
| !! | AAATTATCAGATATAATAAC+CGG | - | chr1_1:3879106-3879125 | None:intergenic | 15.0% |
| !!! | AGTAGTATATTTTTCAAATT+TGG | - | chr1_1:3879196-3879215 | None:intergenic | 15.0% |
| !! | AATGTGATATTTGATTAAAT+GGG | - | chr1_1:3875618-3875637 | None:intergenic | 15.0% |
| !! | AAATGTGATATTTGATTAAA+TGG | - | chr1_1:3875619-3875638 | None:intergenic | 15.0% |
| !! | TACCAAATTTAAAAACAAAT+AGG | + | chr1_1:3875927-3875946 | Msa0002020:intron | 15.0% |
| !!! | AACCTATTTGTTTTTAAATT+TGG | - | chr1_1:3875932-3875951 | None:intergenic | 15.0% |
| !!! | TACATAATTTAAAACCAAAT+AGG | + | chr1_1:3876218-3876237 | Msa0002020:intron | 15.0% |
| !! | ATGATATATATGAAAACTAT+TGG | - | chr1_1:3876384-3876403 | None:intergenic | 15.0% |
| !!! | TTGATTTAAAACTTGATATT+TGG | - | chr1_1:3876618-3876637 | None:intergenic | 15.0% |
| !!! | AAATATCAAGTTTTAAATCA+AGG | + | chr1_1:3876617-3876636 | Msa0002020:intron | 15.0% |
| !!! | AATATCAAGTTTTAAATCAA+GGG | + | chr1_1:3876618-3876637 | Msa0002020:intron | 15.0% |
| !!! | TACAATTTTGATAAATATGA+AGG | - | chr1_1:3876664-3876683 | None:intergenic | 15.0% |
| !! | TAAAAGTTTGATAAATATGA+AGG | - | chr1_1:3876961-3876980 | None:intergenic | 15.0% |
| !!! | TATCAAACTTTTAATCATAT+AGG | + | chr1_1:3876968-3876987 | Msa0002020:intron | 15.0% |
| !!! | TACCTTATTTAAAACAAAAT+AGG | + | chr1_1:3877035-3877054 | Msa0002020:intron | 15.0% |
| !!! | AACCTATTTTGTTTTAAATA+AGG | - | chr1_1:3877040-3877059 | None:intergenic | 15.0% |
| !!! | TTTTTTTACCATACATATTA+AGG | - | chr1_1:3878202-3878221 | None:intergenic | 15.0% |
| !! | AAATTATCAGATATAATAAC+CGG | - | chr1_1:3879106-3879125 | None:intergenic | 15.0% |
| !!! | AGTAGTATATTTTTCAAATT+TGG | - | chr1_1:3879196-3879215 | None:intergenic | 15.0% |
| !!! | TTAGAAGTTGATAAATATGA+AGG | - | chr1_1:3876000-3876019 | None:intergenic | 20.0% |
| !! | TACAAGTTTGATAAATATGA+AGG | - | chr1_1:3876142-3876161 | None:intergenic | 20.0% |
| !! | AACATAATATTGAACCTATT+TGG | - | chr1_1:3876235-3876254 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTGATAAATATGA+AGG | - | chr1_1:3876000-3876019 | None:intergenic | 20.0% |
| !!! | AAAACTATTGGTTTTGTATT+CGG | - | chr1_1:3876372-3876391 | None:intergenic | 20.0% |
| !!! | ATATATCATATTTTGCATCA+AGG | + | chr1_1:3876395-3876414 | Msa0002020:intron | 20.0% |
| !!! | TATATCATATTTTGCATCAA+GGG | + | chr1_1:3876396-3876415 | Msa0002020:intron | 20.0% |
| !!! | ATTCGGTAATATAAAAGTAT+TGG | - | chr1_1:3876580-3876599 | None:intergenic | 20.0% |
| !!! | GGACATATTTGATTTAAATT+CGG | - | chr1_1:3876597-3876616 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTTATATGCTTAA+AGG | - | chr1_1:3876831-3876850 | None:intergenic | 20.0% |
| !!! | GAACTATTTGGTTTTAAATT+TGG | - | chr1_1:3876894-3876913 | None:intergenic | 20.0% |
| !! | AACATAATATGTGAACTATT+TGG | - | chr1_1:3876906-3876925 | None:intergenic | 20.0% |
| !!! | ACAATTCATTTTTCAAATCA+GGG | + | chr1_1:3877061-3877080 | Msa0002020:intron | 20.0% |
| !! | ATGGAAACATTATGATAAAT+TGG | - | chr1_1:3877431-3877450 | None:intergenic | 20.0% |
| !! | ATTCATATTTGTGAAATTTC+AGG | - | chr1_1:3877540-3877559 | None:intergenic | 20.0% |
| !!! | AGTAAATAGGTTTTAAATTG+CGG | - | chr1_1:3878307-3878326 | None:intergenic | 20.0% |
| !!! | ATTTAAAACCTATTTACTGT+TGG | + | chr1_1:3878309-3878328 | Msa0002020:intron | 20.0% |
| !!! | TTTTCAATGGTTTCAAATTA+CGG | - | chr1_1:3878492-3878511 | None:intergenic | 20.0% |
| !!! | AACAATAGCAATTTTTTCAA+TGG | - | chr1_1:3878505-3878524 | None:intergenic | 20.0% |
| !! | AATTCAAAGTGACTTTATTA+AGG | - | chr1_1:3879509-3879528 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTGATAAATATGA+AGG | - | chr1_1:3876000-3876019 | None:intergenic | 20.0% |
| !! | TACAAGTTTGATAAATATGA+AGG | - | chr1_1:3876142-3876161 | None:intergenic | 20.0% |
| !! | AACATAATATTGAACCTATT+TGG | - | chr1_1:3876235-3876254 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTGATAAATATGA+AGG | - | chr1_1:3876000-3876019 | None:intergenic | 20.0% |
| !!! | AAAACTATTGGTTTTGTATT+CGG | - | chr1_1:3876372-3876391 | None:intergenic | 20.0% |
| !!! | ATATATCATATTTTGCATCA+AGG | + | chr1_1:3876395-3876414 | Msa0002020:intron | 20.0% |
| !!! | TATATCATATTTTGCATCAA+GGG | + | chr1_1:3876396-3876415 | Msa0002020:intron | 20.0% |
| !!! | ATTCGGTAATATAAAAGTAT+TGG | - | chr1_1:3876580-3876599 | None:intergenic | 20.0% |
| !!! | GGACATATTTGATTTAAATT+CGG | - | chr1_1:3876597-3876616 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTTATATGCTTAA+AGG | - | chr1_1:3876831-3876850 | None:intergenic | 20.0% |
| !!! | GAACTATTTGGTTTTAAATT+TGG | - | chr1_1:3876894-3876913 | None:intergenic | 20.0% |
| !! | AACATAATATGTGAACTATT+TGG | - | chr1_1:3876906-3876925 | None:intergenic | 20.0% |
| !!! | ACAATTCATTTTTCAAATCA+GGG | + | chr1_1:3877061-3877080 | Msa0002020:intron | 20.0% |
| !! | ATGGAAACATTATGATAAAT+TGG | - | chr1_1:3877431-3877450 | None:intergenic | 20.0% |
| !! | ATTCATATTTGTGAAATTTC+AGG | - | chr1_1:3877540-3877559 | None:intergenic | 20.0% |
| !!! | AGTAAATAGGTTTTAAATTG+CGG | - | chr1_1:3878307-3878326 | None:intergenic | 20.0% |
| !!! | ATTTAAAACCTATTTACTGT+TGG | + | chr1_1:3878309-3878328 | Msa0002020:intron | 20.0% |
| !!! | TTTTCAATGGTTTCAAATTA+CGG | - | chr1_1:3878492-3878511 | None:intergenic | 20.0% |
| !!! | AACAATAGCAATTTTTTCAA+TGG | - | chr1_1:3878505-3878524 | None:intergenic | 20.0% |
| !! | AATTCAAAGTGACTTTATTA+AGG | - | chr1_1:3879509-3879528 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGCTGAGTTTGTT+TGG | - | chr1_1:3875765-3875784 | None:intergenic | 25.0% |
| ! | TAAAAATCATATTTCGCATC+AGG | + | chr1_1:3875778-3875797 | Msa0002020:intron | 25.0% |
| ! | AAAAATCATATTTCGCATCA+GGG | + | chr1_1:3875779-3875798 | Msa0002020:intron | 25.0% |
| ! | TACGAAAATGATAAATGAGA+AGG | - | chr1_1:3875825-3875844 | None:intergenic | 25.0% |
| !!! | AAATGAGGTTTTAGCATTTA+TGG | - | chr1_1:3875849-3875868 | None:intergenic | 25.0% |
| ! | AAATATCATGTTTCGCATAA+AGG | + | chr1_1:3875953-3875972 | Msa0002020:intron | 25.0% |
| ! | AATATCATGTTTCGCATAAA+GGG | + | chr1_1:3875954-3875973 | Msa0002020:intron | 25.0% |
| ! | TTATCAACTTCTAACCATAT+AGG | + | chr1_1:3876006-3876025 | Msa0002020:intron | 25.0% |
| !! | ATTCGGTAAAATGAAAGTAT+TGG | - | chr1_1:3876063-3876082 | None:intergenic | 25.0% |
| !! | AACCTATTTGGTTTCATATT+CGG | - | chr1_1:3876080-3876099 | None:intergenic | 25.0% |
| ! | AATATTATGTTACGCATCAA+AGG | + | chr1_1:3876244-3876263 | Msa0002020:intron | 25.0% |
| ! | TTATCAACTTCTAACCATAT+AGG | + | chr1_1:3876006-3876025 | Msa0002020:intron | 25.0% |
| !!! | AAATGAGATTTTAGCCTATA+TGG | - | chr1_1:3876313-3876332 | None:intergenic | 25.0% |
| !!! | AAAATCTCATTTTTGTGACA+AGG | + | chr1_1:3876321-3876340 | Msa0002020:intron | 25.0% |
| !!! | AAATCTCATTTTTGTGACAA+GGG | + | chr1_1:3876322-3876341 | Msa0002020:intron | 25.0% |
| !! | TATGGTTTGAAGTTTGATAA+AGG | - | chr1_1:3876442-3876461 | None:intergenic | 25.0% |
| ! | TATCAAACTTCAAACCATAT+AGG | + | chr1_1:3876443-3876462 | Msa0002020:intron | 25.0% |
| !!! | AAATGAGATTTTAGCCTATA+TGG | - | chr1_1:3876313-3876332 | None:intergenic | 25.0% |
| ! | TTCTCATTTATCAAACTTGT+AGG | + | chr1_1:3876516-3876535 | Msa0002020:intron | 25.0% |
| !! | AAACGAGATTTTAGACTATA+TGG | - | chr1_1:3876688-3876707 | None:intergenic | 25.0% |
| !!! | AAAATCTCGTTTTTGCAATA+AGG | + | chr1_1:3876846-3876865 | Msa0002020:intron | 25.0% |
| !!! | AAATCTCGTTTTTGCAATAA+GGG | + | chr1_1:3876847-3876866 | Msa0002020:intron | 25.0% |
| !! | AATTTGGTAACAGAAAGTAA+TGG | - | chr1_1:3876878-3876897 | None:intergenic | 25.0% |
| !!! | CACAATTCATTTTTCAAATC+AGG | + | chr1_1:3877060-3877079 | Msa0002020:intron | 25.0% |
| ! | GAACATTTGAACATTATAGA+AGG | - | chr1_1:3877279-3877298 | None:intergenic | 25.0% |
| ! | TTTGGATCATTCTTTACAAT+TGG | - | chr1_1:3877398-3877417 | None:intergenic | 25.0% |
| ! | AAGAATGATCCAAATCTTTA+TGG | + | chr1_1:3877404-3877423 | Msa0002020:CDS | 25.0% |
| ! | TAAATTGGACCATAAAGATT+TGG | - | chr1_1:3877416-3877435 | None:intergenic | 25.0% |
| !!! | CTTCTATAAGTTGTTTTTGA+AGG | - | chr1_1:3877491-3877510 | None:intergenic | 25.0% |
| ! | ACATGAAACATGATAGTTAT+TGG | + | chr1_1:3877695-3877714 | Msa0002020:intron | 25.0% |
| ! | TAAAAAAATGCTGACAAATG+TGG | + | chr1_1:3878214-3878233 | Msa0002020:intron | 25.0% |
| !! | AATTTTCTATGAATGTGTTC+CGG | + | chr1_1:3879084-3879103 | Msa0002020:CDS | 25.0% |
| ! | TGAAATATATCATACTTGAC+AGG | - | chr1_1:3879298-3879317 | None:intergenic | 25.0% |
| ! | AGATAACTTGAAGATAAAGT+AGG | + | chr1_1:3879368-3879387 | Msa0002020:exon | 25.0% |
| ! | CTCGAGTAAAAATATAGATA+CGG | + | chr1_1:3879442-3879461 | Msa0002020:three_prime_UTR | 25.0% |
| ! | TGTGAATTTGTGTATATCTT+TGG | + | chr1_1:3879474-3879493 | Msa0002020:three_prime_UTR | 25.0% |
| !!! | ATTTTTAAGCTGAGTTTGTT+TGG | - | chr1_1:3875765-3875784 | None:intergenic | 25.0% |
| ! | TAAAAATCATATTTCGCATC+AGG | + | chr1_1:3875778-3875797 | Msa0002020:intron | 25.0% |
| ! | AAAAATCATATTTCGCATCA+GGG | + | chr1_1:3875779-3875798 | Msa0002020:intron | 25.0% |
| ! | TACGAAAATGATAAATGAGA+AGG | - | chr1_1:3875825-3875844 | None:intergenic | 25.0% |
| !!! | AAATGAGGTTTTAGCATTTA+TGG | - | chr1_1:3875849-3875868 | None:intergenic | 25.0% |
| ! | AAATATCATGTTTCGCATAA+AGG | + | chr1_1:3875953-3875972 | Msa0002020:intron | 25.0% |
| ! | AATATCATGTTTCGCATAAA+GGG | + | chr1_1:3875954-3875973 | Msa0002020:intron | 25.0% |
| ! | TTATCAACTTCTAACCATAT+AGG | + | chr1_1:3876006-3876025 | Msa0002020:intron | 25.0% |
| !! | ATTCGGTAAAATGAAAGTAT+TGG | - | chr1_1:3876063-3876082 | None:intergenic | 25.0% |
| !! | AACCTATTTGGTTTCATATT+CGG | - | chr1_1:3876080-3876099 | None:intergenic | 25.0% |
| ! | AATATTATGTTACGCATCAA+AGG | + | chr1_1:3876244-3876263 | Msa0002020:intron | 25.0% |
| ! | TTATCAACTTCTAACCATAT+AGG | + | chr1_1:3876006-3876025 | Msa0002020:intron | 25.0% |
| !!! | AAATGAGATTTTAGCCTATA+TGG | - | chr1_1:3876313-3876332 | None:intergenic | 25.0% |
| !!! | AAAATCTCATTTTTGTGACA+AGG | + | chr1_1:3876321-3876340 | Msa0002020:intron | 25.0% |
| !!! | AAATCTCATTTTTGTGACAA+GGG | + | chr1_1:3876322-3876341 | Msa0002020:intron | 25.0% |
| !! | TATGGTTTGAAGTTTGATAA+AGG | - | chr1_1:3876442-3876461 | None:intergenic | 25.0% |
| ! | TATCAAACTTCAAACCATAT+AGG | + | chr1_1:3876443-3876462 | Msa0002020:intron | 25.0% |
| !!! | AAATGAGATTTTAGCCTATA+TGG | - | chr1_1:3876313-3876332 | None:intergenic | 25.0% |
| ! | TTCTCATTTATCAAACTTGT+AGG | + | chr1_1:3876516-3876535 | Msa0002020:intron | 25.0% |
| !! | AAACGAGATTTTAGACTATA+TGG | - | chr1_1:3876688-3876707 | None:intergenic | 25.0% |
| !!! | AAAATCTCGTTTTTGCAATA+AGG | + | chr1_1:3876846-3876865 | Msa0002020:intron | 25.0% |
| !!! | AAATCTCGTTTTTGCAATAA+GGG | + | chr1_1:3876847-3876866 | Msa0002020:intron | 25.0% |
| !! | AATTTGGTAACAGAAAGTAA+TGG | - | chr1_1:3876878-3876897 | None:intergenic | 25.0% |
| !!! | CACAATTCATTTTTCAAATC+AGG | + | chr1_1:3877060-3877079 | Msa0002020:intron | 25.0% |
| ! | GAACATTTGAACATTATAGA+AGG | - | chr1_1:3877279-3877298 | None:intergenic | 25.0% |
| ! | TTTGGATCATTCTTTACAAT+TGG | - | chr1_1:3877398-3877417 | None:intergenic | 25.0% |
| ! | AAGAATGATCCAAATCTTTA+TGG | + | chr1_1:3877404-3877423 | Msa0002020:CDS | 25.0% |
| ! | TAAATTGGACCATAAAGATT+TGG | - | chr1_1:3877416-3877435 | None:intergenic | 25.0% |
| !!! | CTTCTATAAGTTGTTTTTGA+AGG | - | chr1_1:3877491-3877510 | None:intergenic | 25.0% |
| ! | ACATGAAACATGATAGTTAT+TGG | + | chr1_1:3877695-3877714 | Msa0002020:intron | 25.0% |
| ! | TAAAAAAATGCTGACAAATG+TGG | + | chr1_1:3878214-3878233 | Msa0002020:intron | 25.0% |
| !! | AATTTTCTATGAATGTGTTC+CGG | + | chr1_1:3879084-3879103 | Msa0002020:CDS | 25.0% |
| ! | TGAAATATATCATACTTGAC+AGG | - | chr1_1:3879298-3879317 | None:intergenic | 25.0% |
| ! | AGATAACTTGAAGATAAAGT+AGG | + | chr1_1:3879368-3879387 | Msa0002020:exon | 25.0% |
| ! | CTCGAGTAAAAATATAGATA+CGG | + | chr1_1:3879442-3879461 | Msa0002020:three_prime_UTR | 25.0% |
| ! | TGTGAATTTGTGTATATCTT+TGG | + | chr1_1:3879474-3879493 | Msa0002020:three_prime_UTR | 25.0% |
| ATGAATAAAGAGAGATGTTG+TGG | + | chr1_1:3875494-3875513 | Msa0002020:intron | 30.0% | |
| TTAAATATGCAGTTCTCTCA+AGG | - | chr1_1:3875559-3875578 | None:intergenic | 30.0% | |
| ATACGAAGCTTCTTGATTAA+TGG | - | chr1_1:3875590-3875609 | None:intergenic | 30.0% | |
| !! | CTAAAATCATTTTCGGTTTG+AGG | + | chr1_1:3875699-3875718 | Msa0002020:intron | 30.0% |
| ! | AAACTGGAAGTATGAAAATG+TGG | - | chr1_1:3875734-3875753 | None:intergenic | 30.0% |
| ! | TTGTTTGGATTTTGCTAAAC+TGG | - | chr1_1:3875750-3875769 | None:intergenic | 30.0% |
| TCATCGAGAAACAATATGAT+AGG | + | chr1_1:3875881-3875900 | Msa0002020:intron | 30.0% | |
| !! | AAACGAGATTTTAGCCTATA+TGG | - | chr1_1:3876023-3876042 | None:intergenic | 30.0% |
| TACCGAATATGAAACCAAAT+AGG | + | chr1_1:3876075-3876094 | Msa0002020:intron | 30.0% | |
| ACATGATATGTGAACCTATT+TGG | - | chr1_1:3876092-3876111 | None:intergenic | 30.0% | |
| ! | ACATATCATGTTTTGCATCA+GGG | + | chr1_1:3876101-3876120 | Msa0002020:intron | 30.0% |
| ! | TCGGTAAAATGAAAGTGTAT+TGG | - | chr1_1:3876353-3876372 | None:intergenic | 30.0% |
| ! | AAATCAAATTTTCGCGACAT+GGG | + | chr1_1:3876549-3876568 | Msa0002020:intron | 30.0% |
| ! | TTTTAAATCAAGGGAAGTTG+AGG | + | chr1_1:3876627-3876646 | Msa0002020:intron | 30.0% |
| TTTAAATCAAGGGAAGTTGA+GGG | + | chr1_1:3876628-3876647 | Msa0002020:intron | 30.0% | |
| ! | ATTCGGTAAAATGAAGGTAT+TGG | - | chr1_1:3876729-3876748 | None:intergenic | 30.0% |
| TTTCGTATTCGGTAAAATGA+AGG | - | chr1_1:3876735-3876754 | None:intergenic | 30.0% | |
| ! | AACCTATTTGGTTTCGTATT+CGG | - | chr1_1:3876746-3876765 | None:intergenic | 30.0% |
| ACATGATATGTGAACCTATT+TGG | - | chr1_1:3876092-3876111 | None:intergenic | 30.0% | |
| CATATTATGTTACGCATCAA+AGG | + | chr1_1:3876915-3876934 | Msa0002020:intron | 30.0% | |
| ATAATGTTTCCATGTTCAAG+AGG | + | chr1_1:3877438-3877457 | Msa0002020:CDS | 30.0% | |
| TTTAAAAACCGACATCAAAC+CGG | + | chr1_1:3877594-3877613 | Msa0002020:intron | 30.0% | |
| ACTGCCTTAAACTGTTAAAA+CGG | + | chr1_1:3877627-3877646 | Msa0002020:intron | 30.0% | |
| TTTCAGGAGCTATGAATTAA+TGG | + | chr1_1:3877765-3877784 | Msa0002020:intron | 30.0% | |
| AAAGTGTATGTATACAGAGA+AGG | + | chr1_1:3877799-3877818 | Msa0002020:CDS | 30.0% | |
| TTTACTTACCTTTCAGTTCT+AGG | + | chr1_1:3877944-3877963 | Msa0002020:CDS | 30.0% | |
| GATATTGAATCAAGTTCTTG+TGG | - | chr1_1:3878008-3878027 | None:intergenic | 30.0% | |
| !! | CGTATTTTAAATTGCGATAG+CGG | + | chr1_1:3878158-3878177 | Msa0002020:intron | 30.0% |
| GTTGTGATCCTTAATATGTA+TGG | + | chr1_1:3878191-3878210 | Msa0002020:intron | 30.0% | |
| CAGTTACAATATAGTTGAGA+AGG | + | chr1_1:3878251-3878270 | Msa0002020:intron | 30.0% | |
| ! | CAATCACAGTATAAAGGTTT+TGG | - | chr1_1:3878280-3878299 | None:intergenic | 30.0% |
| ! | CAGAAAAGTACAGACAAATT+TGG | + | chr1_1:3878383-3878402 | Msa0002020:intron | 30.0% |
| ! | CAGTGAGAATATAAAGGTTT+TGG | - | chr1_1:3878453-3878472 | None:intergenic | 30.0% |
| CAATTGCAGTGAGAATATAA+AGG | - | chr1_1:3878459-3878478 | None:intergenic | 30.0% | |
| TTATATTCTCACTGCAATTG+TGG | + | chr1_1:3878459-3878478 | Msa0002020:intron | 30.0% | |
| TACATAGTGTTGTCAAGAAA+CGG | + | chr1_1:3878543-3878562 | Msa0002020:intron | 30.0% | |
| ! | GACAAATCCTTCTTTTACAT+CGG | - | chr1_1:3878765-3878784 | None:intergenic | 30.0% |
| GTAAAAGAAGGATTTGTCTT+CGG | + | chr1_1:3878767-3878786 | Msa0002020:CDS | 30.0% | |
| GCCAATACTATTGAAACATT+GGG | + | chr1_1:3878919-3878938 | Msa0002020:CDS | 30.0% | |
| TCCCAATGTTTCAATAGTAT+TGG | - | chr1_1:3878923-3878942 | None:intergenic | 30.0% | |
| TTACTGTTTCCTTTAACCTT+TGG | - | chr1_1:3878983-3879002 | None:intergenic | 30.0% | |
| ! | AAGTACTGTATTTGTGCAAA+AGG | + | chr1_1:3879028-3879047 | Msa0002020:CDS | 30.0% |
| AGTACTGTATTTGTGCAAAA+GGG | + | chr1_1:3879029-3879048 | Msa0002020:CDS | 30.0% | |
| TACTTTCTATTCCAGAAAAG+AGG | + | chr1_1:3879212-3879231 | Msa0002020:CDS | 30.0% | |
| ATATGATCCTTCACTCTATT+TGG | + | chr1_1:3879317-3879336 | Msa0002020:CDS | 30.0% | |
| TATTGTACCAAATAGAGTGA+AGG | - | chr1_1:3879327-3879346 | None:intergenic | 30.0% | |
| GAATTTGTGTATATCTTTGG+AGG | + | chr1_1:3879477-3879496 | Msa0002020:three_prime_UTR | 30.0% | |
| ATGAATAAAGAGAGATGTTG+TGG | + | chr1_1:3875494-3875513 | Msa0002020:intron | 30.0% | |
| TTAAATATGCAGTTCTCTCA+AGG | - | chr1_1:3875559-3875578 | None:intergenic | 30.0% | |
| ATACGAAGCTTCTTGATTAA+TGG | - | chr1_1:3875590-3875609 | None:intergenic | 30.0% | |
| !! | CTAAAATCATTTTCGGTTTG+AGG | + | chr1_1:3875699-3875718 | Msa0002020:intron | 30.0% |
| ! | AAACTGGAAGTATGAAAATG+TGG | - | chr1_1:3875734-3875753 | None:intergenic | 30.0% |
| ! | TTGTTTGGATTTTGCTAAAC+TGG | - | chr1_1:3875750-3875769 | None:intergenic | 30.0% |
| TCATCGAGAAACAATATGAT+AGG | + | chr1_1:3875881-3875900 | Msa0002020:intron | 30.0% | |
| !! | AAACGAGATTTTAGCCTATA+TGG | - | chr1_1:3876023-3876042 | None:intergenic | 30.0% |
| TACCGAATATGAAACCAAAT+AGG | + | chr1_1:3876075-3876094 | Msa0002020:intron | 30.0% | |
| ACATGATATGTGAACCTATT+TGG | - | chr1_1:3876092-3876111 | None:intergenic | 30.0% | |
| ! | ACATATCATGTTTTGCATCA+GGG | + | chr1_1:3876101-3876120 | Msa0002020:intron | 30.0% |
| ! | TCGGTAAAATGAAAGTGTAT+TGG | - | chr1_1:3876353-3876372 | None:intergenic | 30.0% |
| ! | AAATCAAATTTTCGCGACAT+GGG | + | chr1_1:3876549-3876568 | Msa0002020:intron | 30.0% |
| ! | TTTTAAATCAAGGGAAGTTG+AGG | + | chr1_1:3876627-3876646 | Msa0002020:intron | 30.0% |
| TTTAAATCAAGGGAAGTTGA+GGG | + | chr1_1:3876628-3876647 | Msa0002020:intron | 30.0% | |
| ! | ATTCGGTAAAATGAAGGTAT+TGG | - | chr1_1:3876729-3876748 | None:intergenic | 30.0% |
| TTTCGTATTCGGTAAAATGA+AGG | - | chr1_1:3876735-3876754 | None:intergenic | 30.0% | |
| ! | AACCTATTTGGTTTCGTATT+CGG | - | chr1_1:3876746-3876765 | None:intergenic | 30.0% |
| ACATGATATGTGAACCTATT+TGG | - | chr1_1:3876092-3876111 | None:intergenic | 30.0% | |
| CATATTATGTTACGCATCAA+AGG | + | chr1_1:3876915-3876934 | Msa0002020:intron | 30.0% | |
| ATAATGTTTCCATGTTCAAG+AGG | + | chr1_1:3877438-3877457 | Msa0002020:CDS | 30.0% | |
| TTTAAAAACCGACATCAAAC+CGG | + | chr1_1:3877594-3877613 | Msa0002020:intron | 30.0% | |
| ACTGCCTTAAACTGTTAAAA+CGG | + | chr1_1:3877627-3877646 | Msa0002020:intron | 30.0% | |
| TTTCAGGAGCTATGAATTAA+TGG | + | chr1_1:3877765-3877784 | Msa0002020:intron | 30.0% | |
| AAAGTGTATGTATACAGAGA+AGG | + | chr1_1:3877799-3877818 | Msa0002020:CDS | 30.0% | |
| TTTACTTACCTTTCAGTTCT+AGG | + | chr1_1:3877944-3877963 | Msa0002020:CDS | 30.0% | |
| GATATTGAATCAAGTTCTTG+TGG | - | chr1_1:3878008-3878027 | None:intergenic | 30.0% | |
| !! | CGTATTTTAAATTGCGATAG+CGG | + | chr1_1:3878158-3878177 | Msa0002020:intron | 30.0% |
| GTTGTGATCCTTAATATGTA+TGG | + | chr1_1:3878191-3878210 | Msa0002020:intron | 30.0% | |
| CAGTTACAATATAGTTGAGA+AGG | + | chr1_1:3878251-3878270 | Msa0002020:intron | 30.0% | |
| ! | CAATCACAGTATAAAGGTTT+TGG | - | chr1_1:3878280-3878299 | None:intergenic | 30.0% |
| ! | CAGAAAAGTACAGACAAATT+TGG | + | chr1_1:3878383-3878402 | Msa0002020:intron | 30.0% |
| ! | CAGTGAGAATATAAAGGTTT+TGG | - | chr1_1:3878453-3878472 | None:intergenic | 30.0% |
| CAATTGCAGTGAGAATATAA+AGG | - | chr1_1:3878459-3878478 | None:intergenic | 30.0% | |
| TTATATTCTCACTGCAATTG+TGG | + | chr1_1:3878459-3878478 | Msa0002020:intron | 30.0% | |
| TACATAGTGTTGTCAAGAAA+CGG | + | chr1_1:3878543-3878562 | Msa0002020:intron | 30.0% | |
| ! | GACAAATCCTTCTTTTACAT+CGG | - | chr1_1:3878765-3878784 | None:intergenic | 30.0% |
| GTAAAAGAAGGATTTGTCTT+CGG | + | chr1_1:3878767-3878786 | Msa0002020:CDS | 30.0% | |
| GCCAATACTATTGAAACATT+GGG | + | chr1_1:3878919-3878938 | Msa0002020:CDS | 30.0% | |
| TCCCAATGTTTCAATAGTAT+TGG | - | chr1_1:3878923-3878942 | None:intergenic | 30.0% | |
| TTACTGTTTCCTTTAACCTT+TGG | - | chr1_1:3878983-3879002 | None:intergenic | 30.0% | |
| ! | AAGTACTGTATTTGTGCAAA+AGG | + | chr1_1:3879028-3879047 | Msa0002020:CDS | 30.0% |
| AGTACTGTATTTGTGCAAAA+GGG | + | chr1_1:3879029-3879048 | Msa0002020:CDS | 30.0% | |
| TACTTTCTATTCCAGAAAAG+AGG | + | chr1_1:3879212-3879231 | Msa0002020:CDS | 30.0% | |
| ATATGATCCTTCACTCTATT+TGG | + | chr1_1:3879317-3879336 | Msa0002020:CDS | 30.0% | |
| TATTGTACCAAATAGAGTGA+AGG | - | chr1_1:3879327-3879346 | None:intergenic | 30.0% | |
| GAATTTGTGTATATCTTTGG+AGG | + | chr1_1:3879477-3879496 | Msa0002020:three_prime_UTR | 30.0% | |
| TTTCGCATAAAGGGATATAG+AGG | + | chr1_1:3875963-3875982 | Msa0002020:intron | 35.0% | |
| TTCGCATAAAGGGATATAGA+GGG | + | chr1_1:3875964-3875983 | Msa0002020:intron | 35.0% | |
| ! | CACATATCATGTTTTGCATC+AGG | + | chr1_1:3876100-3876119 | Msa0002020:intron | 35.0% |
| ! | AAAATTTCGTTTTCGCAGCA+AGG | + | chr1_1:3876174-3876193 | Msa0002020:intron | 35.0% |
| CATGTCGCGAAAATTTGATT+TGG | - | chr1_1:3876550-3876569 | None:intergenic | 35.0% | |
| ! | CAAATCAAATTTTCGCGACA+TGG | + | chr1_1:3876548-3876567 | Msa0002020:intron | 35.0% |
| TACCGAATACGAAACCAAAT+AGG | + | chr1_1:3876741-3876760 | Msa0002020:intron | 35.0% | |
| TACATCTCATTTCACGACAA+GGG | + | chr1_1:3876992-3877011 | Msa0002020:intron | 35.0% | |
| !!! | CATTCTCTTTTTTGCGACAA+GGG | + | chr1_1:3877119-3877138 | Msa0002020:intron | 35.0% |
| !! | TCAATGTATTTTAGAAGCCG+AGG | + | chr1_1:3877315-3877334 | Msa0002020:intron | 35.0% |
| TCAACATTTGAAAACCACCT+CGG | - | chr1_1:3877335-3877354 | None:intergenic | 35.0% | |
| TGTTGATCAAGAGTTACTAC+AGG | + | chr1_1:3877349-3877368 | Msa0002020:CDS | 35.0% | |
| TGAGTAATACCTCTTGAACA+TGG | - | chr1_1:3877450-3877469 | None:intergenic | 35.0% | |
| CTGCCTTAAACTGTTAAAAC+GGG | + | chr1_1:3877628-3877647 | Msa0002020:intron | 35.0% | |
| !! | AGTCCCGTTTTAACAGTTTA+AGG | - | chr1_1:3877634-3877653 | None:intergenic | 35.0% |
| !!! | GTTATTTTGGTGGTCAATCA+CGG | - | chr1_1:3877660-3877679 | None:intergenic | 35.0% |
| CATGTTTCATGTAACCACTA+CGG | - | chr1_1:3877687-3877706 | None:intergenic | 35.0% | |
| TGTTACCAAAAACCCAAAGA+AGG | + | chr1_1:3877912-3877931 | Msa0002020:CDS | 35.0% | |
| AAAACAGATGAGCCTTCTTT+GGG | - | chr1_1:3877927-3877946 | None:intergenic | 35.0% | |
| TAAAACAGATGAGCCTTCTT+TGG | - | chr1_1:3877928-3877947 | None:intergenic | 35.0% | |
| ATGCGAATTCTTCACATACA+AGG | - | chr1_1:3877983-3878002 | None:intergenic | 35.0% | |
| TGATTATGTAGACCTGATTG+CGG | + | chr1_1:3878032-3878051 | Msa0002020:CDS | 35.0% | |
| ! | TTCTAGTTGGTTGTCATGAT+TGG | + | chr1_1:3878097-3878116 | Msa0002020:intron | 35.0% |
| TCTAGTTGGTTGTCATGATT+GGG | + | chr1_1:3878098-3878117 | Msa0002020:intron | 35.0% | |
| TTGTAACTGCAAAGTTGCAT+TGG | - | chr1_1:3878240-3878259 | None:intergenic | 35.0% | |
| GGTTCACAATCACAGTATAA+AGG | - | chr1_1:3878286-3878305 | None:intergenic | 35.0% | |
| ACCTATTTACTGTTGGAACT+TGG | + | chr1_1:3878316-3878335 | Msa0002020:intron | 35.0% | |
| TCCAAGTTCCAACAGTAAAT+AGG | - | chr1_1:3878320-3878339 | None:intergenic | 35.0% | |
| TGATCGCAATATAAAACCTG+AGG | - | chr1_1:3878345-3878364 | None:intergenic | 35.0% | |
| ATAACAACTGCATTTGTGGT+CGG | - | chr1_1:3878414-3878433 | None:intergenic | 35.0% | |
| CTACATAACAACTGCATTTG+TGG | - | chr1_1:3878418-3878437 | None:intergenic | 35.0% | |
| CAGTTGTTATGTAGTTGTGA+AGG | + | chr1_1:3878424-3878443 | Msa0002020:intron | 35.0% | |
| TTACAAGACTAGTGCTACAA+AGG | - | chr1_1:3878643-3878662 | None:intergenic | 35.0% | |
| AAGATACTTCTCTTCTATGC+AGG | + | chr1_1:3878685-3878704 | Msa0002020:intron | 35.0% | |
| TTGTTGGAATTTGAGCGTTT+CGG | - | chr1_1:3878823-3878842 | None:intergenic | 35.0% | |
| AAACGCTCAAATTCCAACAA+GGG | + | chr1_1:3878823-3878842 | Msa0002020:CDS | 35.0% | |
| GGCCAATACTATTGAAACAT+TGG | + | chr1_1:3878918-3878937 | Msa0002020:CDS | 35.0% | |
| GATCCTGACATGAAAATCTT+CGG | + | chr1_1:3878950-3878969 | Msa0002020:CDS | 35.0% | |
| ! | TTTCCGAAGATTTTCATGTC+AGG | - | chr1_1:3878956-3878975 | None:intergenic | 35.0% |
| AATCTTCGGAAAATTGCCAA+AGG | + | chr1_1:3878964-3878983 | Msa0002020:CDS | 35.0% | |
| GGAAAATTGCCAAAGGTTAA+AGG | + | chr1_1:3878971-3878990 | Msa0002020:CDS | 35.0% | |
| CAATCCAAAACCTCGAAAAA+GGG | - | chr1_1:3879136-3879155 | None:intergenic | 35.0% | |
| !!! | CTTTTTCGAGGTTTTGGATT+GGG | + | chr1_1:3879135-3879154 | Msa0002020:CDS | 35.0% |
| ! | ATCCTTTTCTGTCATTGTTC+TGG | + | chr1_1:3879159-3879178 | Msa0002020:CDS | 35.0% |
| ! | ATGCTTAGATACCTCTTTTC+TGG | - | chr1_1:3879226-3879245 | None:intergenic | 35.0% |
| GTATCTAAGCATGCTTATGA+GGG | + | chr1_1:3879234-3879253 | Msa0002020:CDS | 35.0% | |
| CATGCTTATGAGGGTAAAAA+AGG | + | chr1_1:3879243-3879262 | Msa0002020:CDS | 35.0% | |
| ! | TCTTCAAGTTATCTAGCTAG+TGG | - | chr1_1:3879362-3879381 | None:intergenic | 35.0% |
| CTTGAAGATAAAGTAGGAAC+AGG | + | chr1_1:3879374-3879393 | Msa0002020:three_prime_UTR | 35.0% | |
| ! | TGTGTATATCTTTGGAGGTT+TGG | + | chr1_1:3879482-3879501 | Msa0002020:three_prime_UTR | 35.0% |
| ! | GTGTATATCTTTGGAGGTTT+GGG | + | chr1_1:3879483-3879502 | Msa0002020:three_prime_UTR | 35.0% |
| TTTCGCATAAAGGGATATAG+AGG | + | chr1_1:3875963-3875982 | Msa0002020:intron | 35.0% | |
| TTCGCATAAAGGGATATAGA+GGG | + | chr1_1:3875964-3875983 | Msa0002020:intron | 35.0% | |
| ! | CACATATCATGTTTTGCATC+AGG | + | chr1_1:3876100-3876119 | Msa0002020:intron | 35.0% |
| ! | AAAATTTCGTTTTCGCAGCA+AGG | + | chr1_1:3876174-3876193 | Msa0002020:intron | 35.0% |
| CATGTCGCGAAAATTTGATT+TGG | - | chr1_1:3876550-3876569 | None:intergenic | 35.0% | |
| ! | CAAATCAAATTTTCGCGACA+TGG | + | chr1_1:3876548-3876567 | Msa0002020:intron | 35.0% |
| TACCGAATACGAAACCAAAT+AGG | + | chr1_1:3876741-3876760 | Msa0002020:intron | 35.0% | |
| TACATCTCATTTCACGACAA+GGG | + | chr1_1:3876992-3877011 | Msa0002020:intron | 35.0% | |
| !!! | CATTCTCTTTTTTGCGACAA+GGG | + | chr1_1:3877119-3877138 | Msa0002020:intron | 35.0% |
| !! | TCAATGTATTTTAGAAGCCG+AGG | + | chr1_1:3877315-3877334 | Msa0002020:intron | 35.0% |
| TCAACATTTGAAAACCACCT+CGG | - | chr1_1:3877335-3877354 | None:intergenic | 35.0% | |
| TGTTGATCAAGAGTTACTAC+AGG | + | chr1_1:3877349-3877368 | Msa0002020:CDS | 35.0% | |
| TGAGTAATACCTCTTGAACA+TGG | - | chr1_1:3877450-3877469 | None:intergenic | 35.0% | |
| CTGCCTTAAACTGTTAAAAC+GGG | + | chr1_1:3877628-3877647 | Msa0002020:intron | 35.0% | |
| !! | AGTCCCGTTTTAACAGTTTA+AGG | - | chr1_1:3877634-3877653 | None:intergenic | 35.0% |
| !!! | GTTATTTTGGTGGTCAATCA+CGG | - | chr1_1:3877660-3877679 | None:intergenic | 35.0% |
| CATGTTTCATGTAACCACTA+CGG | - | chr1_1:3877687-3877706 | None:intergenic | 35.0% | |
| TGTTACCAAAAACCCAAAGA+AGG | + | chr1_1:3877912-3877931 | Msa0002020:CDS | 35.0% | |
| AAAACAGATGAGCCTTCTTT+GGG | - | chr1_1:3877927-3877946 | None:intergenic | 35.0% | |
| TAAAACAGATGAGCCTTCTT+TGG | - | chr1_1:3877928-3877947 | None:intergenic | 35.0% | |
| ATGCGAATTCTTCACATACA+AGG | - | chr1_1:3877983-3878002 | None:intergenic | 35.0% | |
| TGATTATGTAGACCTGATTG+CGG | + | chr1_1:3878032-3878051 | Msa0002020:CDS | 35.0% | |
| ! | TTCTAGTTGGTTGTCATGAT+TGG | + | chr1_1:3878097-3878116 | Msa0002020:intron | 35.0% |
| TCTAGTTGGTTGTCATGATT+GGG | + | chr1_1:3878098-3878117 | Msa0002020:intron | 35.0% | |
| TTGTAACTGCAAAGTTGCAT+TGG | - | chr1_1:3878240-3878259 | None:intergenic | 35.0% | |
| GGTTCACAATCACAGTATAA+AGG | - | chr1_1:3878286-3878305 | None:intergenic | 35.0% | |
| ACCTATTTACTGTTGGAACT+TGG | + | chr1_1:3878316-3878335 | Msa0002020:intron | 35.0% | |
| TCCAAGTTCCAACAGTAAAT+AGG | - | chr1_1:3878320-3878339 | None:intergenic | 35.0% | |
| TGATCGCAATATAAAACCTG+AGG | - | chr1_1:3878345-3878364 | None:intergenic | 35.0% | |
| ATAACAACTGCATTTGTGGT+CGG | - | chr1_1:3878414-3878433 | None:intergenic | 35.0% | |
| CTACATAACAACTGCATTTG+TGG | - | chr1_1:3878418-3878437 | None:intergenic | 35.0% | |
| CAGTTGTTATGTAGTTGTGA+AGG | + | chr1_1:3878424-3878443 | Msa0002020:intron | 35.0% | |
| TTACAAGACTAGTGCTACAA+AGG | - | chr1_1:3878643-3878662 | None:intergenic | 35.0% | |
| AAGATACTTCTCTTCTATGC+AGG | + | chr1_1:3878685-3878704 | Msa0002020:intron | 35.0% | |
| TTGTTGGAATTTGAGCGTTT+CGG | - | chr1_1:3878823-3878842 | None:intergenic | 35.0% | |
| AAACGCTCAAATTCCAACAA+GGG | + | chr1_1:3878823-3878842 | Msa0002020:CDS | 35.0% | |
| GGCCAATACTATTGAAACAT+TGG | + | chr1_1:3878918-3878937 | Msa0002020:CDS | 35.0% | |
| GATCCTGACATGAAAATCTT+CGG | + | chr1_1:3878950-3878969 | Msa0002020:CDS | 35.0% | |
| ! | TTTCCGAAGATTTTCATGTC+AGG | - | chr1_1:3878956-3878975 | None:intergenic | 35.0% |
| AATCTTCGGAAAATTGCCAA+AGG | + | chr1_1:3878964-3878983 | Msa0002020:CDS | 35.0% | |
| GGAAAATTGCCAAAGGTTAA+AGG | + | chr1_1:3878971-3878990 | Msa0002020:CDS | 35.0% | |
| CAATCCAAAACCTCGAAAAA+GGG | - | chr1_1:3879136-3879155 | None:intergenic | 35.0% | |
| !!! | CTTTTTCGAGGTTTTGGATT+GGG | + | chr1_1:3879135-3879154 | Msa0002020:CDS | 35.0% |
| ! | ATCCTTTTCTGTCATTGTTC+TGG | + | chr1_1:3879159-3879178 | Msa0002020:CDS | 35.0% |
| ! | ATGCTTAGATACCTCTTTTC+TGG | - | chr1_1:3879226-3879245 | None:intergenic | 35.0% |
| GTATCTAAGCATGCTTATGA+GGG | + | chr1_1:3879234-3879253 | Msa0002020:CDS | 35.0% | |
| CATGCTTATGAGGGTAAAAA+AGG | + | chr1_1:3879243-3879262 | Msa0002020:CDS | 35.0% | |
| ! | TCTTCAAGTTATCTAGCTAG+TGG | - | chr1_1:3879362-3879381 | None:intergenic | 35.0% |
| CTTGAAGATAAAGTAGGAAC+AGG | + | chr1_1:3879374-3879393 | Msa0002020:three_prime_UTR | 35.0% | |
| ! | TGTGTATATCTTTGGAGGTT+TGG | + | chr1_1:3879482-3879501 | Msa0002020:three_prime_UTR | 35.0% |
| ! | GTGTATATCTTTGGAGGTTT+GGG | + | chr1_1:3879483-3879502 | Msa0002020:three_prime_UTR | 35.0% |
| TGACTCTTGTCGCAAAAATG+AGG | - | chr1_1:3875864-3875883 | None:intergenic | 40.0% | |
| ! | AAATCTCGTTTTCCGCAACA+AGG | + | chr1_1:3876697-3876716 | Msa0002020:intron | 40.0% |
| ! | AATCTCGTTTTCCGCAACAA+GGG | + | chr1_1:3876698-3876717 | Msa0002020:intron | 40.0% |
| TATTGGAATGTCCCTTGTTG+CGG | - | chr1_1:3876712-3876731 | None:intergenic | 40.0% | |
| ACATATCATGTTTCGCGTCA+AGG | + | chr1_1:3876767-3876786 | Msa0002020:intron | 40.0% | |
| CATATCATGTTTCGCGTCAA+GGG | + | chr1_1:3876768-3876787 | Msa0002020:intron | 40.0% | |
| CTACATCTCATTTCACGACA+AGG | + | chr1_1:3876991-3877010 | Msa0002020:intron | 40.0% | |
| CCTTGTCGCAAAAAAGAGAA+TGG | - | chr1_1:3877121-3877140 | None:intergenic | 40.0% | |
| !!! | CCATTCTCTTTTTTGCGACA+AGG | + | chr1_1:3877118-3877137 | Msa0002020:intron | 40.0% |
| !! | ATGTATTTTAGAAGCCGAGG+TGG | + | chr1_1:3877318-3877337 | Msa0002020:intron | 40.0% |
| TTCATGTAACCACTACGGTT+CGG | - | chr1_1:3877682-3877701 | None:intergenic | 40.0% | |
| TCCATGTGACTGTAACTTTC+AGG | + | chr1_1:3877749-3877768 | Msa0002020:intron | 40.0% | |
| TCCTGAAAGTTACAGTCACA+TGG | - | chr1_1:3877753-3877772 | None:intergenic | 40.0% | |
| AGGGTGGTTTATGAAGCTAA+TGG | + | chr1_1:3877873-3877892 | Msa0002020:CDS | 40.0% | |
| !! | ATGAGCCTTCTTTGGGTTTT+TGG | - | chr1_1:3877920-3877939 | None:intergenic | 40.0% |
| TCTAGCATCCTAGAACTGAA+AGG | - | chr1_1:3877955-3877974 | None:intergenic | 40.0% | |
| !! | TTTCAGTTCTAGGATGCTAG+AGG | + | chr1_1:3877954-3877973 | Msa0002020:CDS | 40.0% |
| !! | CATTCTTTCTGGAACAGAAC+TGG | + | chr1_1:3878060-3878079 | Msa0002020:CDS | 40.0% |
| !!! | GGTGCTGATCATTTTCTAGT+TGG | + | chr1_1:3878084-3878103 | Msa0002020:intron | 40.0% |
| ATGTTGTCAACCACATATCG+CGG | - | chr1_1:3878618-3878637 | None:intergenic | 40.0% | |
| ! | AATCGTAGTTTGGTTTCCGA+TGG | - | chr1_1:3878713-3878732 | None:intergenic | 40.0% |
| ATCGGAAACCAAACTACGAT+TGG | + | chr1_1:3878712-3878731 | Msa0002020:CDS | 40.0% | |
| GAAACGCTCAAATTCCAACA+AGG | + | chr1_1:3878822-3878841 | Msa0002020:CDS | 40.0% | |
| CAAATTCCAACAAGGGATCT+TGG | + | chr1_1:3878830-3878849 | Msa0002020:CDS | 40.0% | |
| !!! | ACAACATTAGCCTTTTTCGC+AGG | + | chr1_1:3878875-3878894 | Msa0002020:CDS | 40.0% |
| !!! | CAACATTAGCCTTTTTCGCA+GGG | + | chr1_1:3878876-3878895 | Msa0002020:CDS | 40.0% |
| AAAATTGCTTCCACGACTCT+TGG | - | chr1_1:3879070-3879089 | None:intergenic | 40.0% | |
| CCAATCCAAAACCTCGAAAA+AGG | - | chr1_1:3879137-3879156 | None:intergenic | 40.0% | |
| !!! | CCTTTTTCGAGGTTTTGGAT+TGG | + | chr1_1:3879134-3879153 | Msa0002020:CDS | 40.0% |
| CTCCAGAACAATGACAGAAA+AGG | - | chr1_1:3879164-3879183 | None:intergenic | 40.0% | |
| !! | TTCTGTCATTGTTCTGGAGA+AGG | + | chr1_1:3879165-3879184 | Msa0002020:CDS | 40.0% |
| GGTATCTAAGCATGCTTATG+AGG | + | chr1_1:3879233-3879252 | Msa0002020:CDS | 40.0% | |
| !! | AGGTACAGAAGCATTTCCTT+TGG | + | chr1_1:3879263-3879282 | Msa0002020:CDS | 40.0% |
| TGACAGGATTCTTGTTCCAA+AGG | - | chr1_1:3879282-3879301 | None:intergenic | 40.0% | |
| TGACTCTTGTCGCAAAAATG+AGG | - | chr1_1:3875864-3875883 | None:intergenic | 40.0% | |
| ! | AAATCTCGTTTTCCGCAACA+AGG | + | chr1_1:3876697-3876716 | Msa0002020:intron | 40.0% |
| ! | AATCTCGTTTTCCGCAACAA+GGG | + | chr1_1:3876698-3876717 | Msa0002020:intron | 40.0% |
| TATTGGAATGTCCCTTGTTG+CGG | - | chr1_1:3876712-3876731 | None:intergenic | 40.0% | |
| ACATATCATGTTTCGCGTCA+AGG | + | chr1_1:3876767-3876786 | Msa0002020:intron | 40.0% | |
| CATATCATGTTTCGCGTCAA+GGG | + | chr1_1:3876768-3876787 | Msa0002020:intron | 40.0% | |
| CTACATCTCATTTCACGACA+AGG | + | chr1_1:3876991-3877010 | Msa0002020:intron | 40.0% | |
| CCTTGTCGCAAAAAAGAGAA+TGG | - | chr1_1:3877121-3877140 | None:intergenic | 40.0% | |
| !!! | CCATTCTCTTTTTTGCGACA+AGG | + | chr1_1:3877118-3877137 | Msa0002020:intron | 40.0% |
| !! | ATGTATTTTAGAAGCCGAGG+TGG | + | chr1_1:3877318-3877337 | Msa0002020:intron | 40.0% |
| TTCATGTAACCACTACGGTT+CGG | - | chr1_1:3877682-3877701 | None:intergenic | 40.0% | |
| TCCATGTGACTGTAACTTTC+AGG | + | chr1_1:3877749-3877768 | Msa0002020:intron | 40.0% | |
| TCCTGAAAGTTACAGTCACA+TGG | - | chr1_1:3877753-3877772 | None:intergenic | 40.0% | |
| AGGGTGGTTTATGAAGCTAA+TGG | + | chr1_1:3877873-3877892 | Msa0002020:CDS | 40.0% | |
| !! | ATGAGCCTTCTTTGGGTTTT+TGG | - | chr1_1:3877920-3877939 | None:intergenic | 40.0% |
| TCTAGCATCCTAGAACTGAA+AGG | - | chr1_1:3877955-3877974 | None:intergenic | 40.0% | |
| !! | TTTCAGTTCTAGGATGCTAG+AGG | + | chr1_1:3877954-3877973 | Msa0002020:CDS | 40.0% |
| !! | CATTCTTTCTGGAACAGAAC+TGG | + | chr1_1:3878060-3878079 | Msa0002020:CDS | 40.0% |
| !!! | GGTGCTGATCATTTTCTAGT+TGG | + | chr1_1:3878084-3878103 | Msa0002020:intron | 40.0% |
| ATGTTGTCAACCACATATCG+CGG | - | chr1_1:3878618-3878637 | None:intergenic | 40.0% | |
| ! | AATCGTAGTTTGGTTTCCGA+TGG | - | chr1_1:3878713-3878732 | None:intergenic | 40.0% |
| ATCGGAAACCAAACTACGAT+TGG | + | chr1_1:3878712-3878731 | Msa0002020:CDS | 40.0% | |
| GAAACGCTCAAATTCCAACA+AGG | + | chr1_1:3878822-3878841 | Msa0002020:CDS | 40.0% | |
| CAAATTCCAACAAGGGATCT+TGG | + | chr1_1:3878830-3878849 | Msa0002020:CDS | 40.0% | |
| !!! | ACAACATTAGCCTTTTTCGC+AGG | + | chr1_1:3878875-3878894 | Msa0002020:CDS | 40.0% |
| !!! | CAACATTAGCCTTTTTCGCA+GGG | + | chr1_1:3878876-3878895 | Msa0002020:CDS | 40.0% |
| AAAATTGCTTCCACGACTCT+TGG | - | chr1_1:3879070-3879089 | None:intergenic | 40.0% | |
| CCAATCCAAAACCTCGAAAA+AGG | - | chr1_1:3879137-3879156 | None:intergenic | 40.0% | |
| !!! | CCTTTTTCGAGGTTTTGGAT+TGG | + | chr1_1:3879134-3879153 | Msa0002020:CDS | 40.0% |
| CTCCAGAACAATGACAGAAA+AGG | - | chr1_1:3879164-3879183 | None:intergenic | 40.0% | |
| !! | TTCTGTCATTGTTCTGGAGA+AGG | + | chr1_1:3879165-3879184 | Msa0002020:CDS | 40.0% |
| GGTATCTAAGCATGCTTATG+AGG | + | chr1_1:3879233-3879252 | Msa0002020:CDS | 40.0% | |
| !! | AGGTACAGAAGCATTTCCTT+TGG | + | chr1_1:3879263-3879282 | Msa0002020:CDS | 40.0% |
| TGACAGGATTCTTGTTCCAA+AGG | - | chr1_1:3879282-3879301 | None:intergenic | 40.0% | |
| TATGAAGGTTGAACCCTCGA+TGG | - | chr1_1:3876127-3876146 | None:intergenic | 45.0% | |
| TTACGCATCAAAGGACATCG+AGG | + | chr1_1:3876253-3876272 | Msa0002020:intron | 45.0% | |
| TACGCATCAAAGGACATCGA+GGG | + | chr1_1:3876254-3876273 | Msa0002020:intron | 45.0% | |
| ! | TTTTGCATCAAGGGACATCG+AGG | + | chr1_1:3876405-3876424 | Msa0002020:intron | 45.0% |
| TTTGCATCAAGGGACATCGA+GGG | + | chr1_1:3876406-3876425 | Msa0002020:intron | 45.0% | |
| TTGCCTCATGTTTCGCATCA+AGG | + | chr1_1:3876480-3876499 | Msa0002020:intron | 45.0% | |
| TGCCTCATGTTTCGCATCAA+GGG | + | chr1_1:3876481-3876500 | Msa0002020:intron | 45.0% | |
| TTACGCATCAAAGGACATCG+AGG | + | chr1_1:3876253-3876272 | Msa0002020:intron | 45.0% | |
| TACGCATCAAAGGACATCGA+GGG | + | chr1_1:3876254-3876273 | Msa0002020:intron | 45.0% | |
| !! | AATCCTGACCGGTTTGATGT+CGG | - | chr1_1:3877605-3877624 | None:intergenic | 45.0% |
| TAAGGCAGTTGAATCCTGAC+CGG | - | chr1_1:3877616-3877635 | None:intergenic | 45.0% | |
| !!! | CTACGGTTCGGTTATTTTGG+TGG | - | chr1_1:3877670-3877689 | None:intergenic | 45.0% |
| !!! | CCACTACGGTTCGGTTATTT+TGG | - | chr1_1:3877673-3877692 | None:intergenic | 45.0% |
| CCAAAATAACCGAACCGTAG+TGG | + | chr1_1:3877670-3877689 | Msa0002020:intron | 45.0% | |
| AGAAACGGCGAATGCAGTAT+AGG | - | chr1_1:3877832-3877851 | None:intergenic | 45.0% | |
| GCATAGATTCCGGTGAGAAA+CGG | - | chr1_1:3877847-3877866 | None:intergenic | 45.0% | |
| ACCGGAATCTATGCTTCTGA+AGG | + | chr1_1:3877853-3877872 | Msa0002020:CDS | 45.0% | |
| ! | CCCTTCAGAAGCATAGATTC+CGG | - | chr1_1:3877857-3877876 | None:intergenic | 45.0% |
| CCGGAATCTATGCTTCTGAA+GGG | + | chr1_1:3877854-3877873 | Msa0002020:CDS | 45.0% | |
| ! | GAATCTATGCTTCTGAAGGG+TGG | + | chr1_1:3877857-3877876 | Msa0002020:CDS | 45.0% |
| !! | TCTTTCTGGAACAGAACTGG+AGG | + | chr1_1:3878063-3878082 | Msa0002020:CDS | 45.0% |
| TGCGATCACAGTTGCAGATA+AGG | + | chr1_1:3878357-3878376 | Msa0002020:intron | 45.0% | |
| GATCACAGTTGCAGATAAGG+TGG | + | chr1_1:3878360-3878379 | Msa0002020:intron | 45.0% | |
| TCTCACTGCAATTGTGGTTG+TGG | + | chr1_1:3878465-3878484 | Msa0002020:intron | 45.0% | |
| AGCATAGCGTTGTAGCATAG+TGG | + | chr1_1:3878570-3878589 | Msa0002020:intron | 45.0% | |
| CCACATATCGCGGAAAATTG+TGG | - | chr1_1:3878608-3878627 | None:intergenic | 45.0% | |
| ! | CCACAATTTTCCGCGATATG+TGG | + | chr1_1:3878605-3878624 | Msa0002020:intron | 45.0% |
| TACGATTGGCGAACTGCATA+AGG | + | chr1_1:3878726-3878745 | Msa0002020:CDS | 45.0% | |
| ! | TTTTACATCGGCGTTGCAGA+GGG | - | chr1_1:3878753-3878772 | None:intergenic | 45.0% |
| TGCAACGCCGATGTAAAAGA+AGG | + | chr1_1:3878755-3878774 | Msa0002020:CDS | 45.0% | |
| ATTCCAACAAGGGATCTTGG+TGG | + | chr1_1:3878833-3878852 | Msa0002020:CDS | 45.0% | |
| GGAGCATGCATGGTTATGTA+AGG | + | chr1_1:3878897-3878916 | Msa0002020:CDS | 45.0% | |
| AGTGAATAGTCCAAGAGTCG+TGG | + | chr1_1:3879057-3879076 | Msa0002020:CDS | 45.0% | |
| !! | TTTTGTGCCACCCTTTTTCG+AGG | + | chr1_1:3879123-3879142 | Msa0002020:CDS | 45.0% |
| TCCAAAACCTCGAAAAAGGG+TGG | - | chr1_1:3879133-3879152 | None:intergenic | 45.0% | |
| TATGAAGGTTGAACCCTCGA+TGG | - | chr1_1:3876127-3876146 | None:intergenic | 45.0% | |
| TTACGCATCAAAGGACATCG+AGG | + | chr1_1:3876253-3876272 | Msa0002020:intron | 45.0% | |
| TACGCATCAAAGGACATCGA+GGG | + | chr1_1:3876254-3876273 | Msa0002020:intron | 45.0% | |
| ! | TTTTGCATCAAGGGACATCG+AGG | + | chr1_1:3876405-3876424 | Msa0002020:intron | 45.0% |
| TTTGCATCAAGGGACATCGA+GGG | + | chr1_1:3876406-3876425 | Msa0002020:intron | 45.0% | |
| TTGCCTCATGTTTCGCATCA+AGG | + | chr1_1:3876480-3876499 | Msa0002020:intron | 45.0% | |
| TGCCTCATGTTTCGCATCAA+GGG | + | chr1_1:3876481-3876500 | Msa0002020:intron | 45.0% | |
| TTACGCATCAAAGGACATCG+AGG | + | chr1_1:3876253-3876272 | Msa0002020:intron | 45.0% | |
| TACGCATCAAAGGACATCGA+GGG | + | chr1_1:3876254-3876273 | Msa0002020:intron | 45.0% | |
| !! | AATCCTGACCGGTTTGATGT+CGG | - | chr1_1:3877605-3877624 | None:intergenic | 45.0% |
| TAAGGCAGTTGAATCCTGAC+CGG | - | chr1_1:3877616-3877635 | None:intergenic | 45.0% | |
| !!! | CTACGGTTCGGTTATTTTGG+TGG | - | chr1_1:3877670-3877689 | None:intergenic | 45.0% |
| !!! | CCACTACGGTTCGGTTATTT+TGG | - | chr1_1:3877673-3877692 | None:intergenic | 45.0% |
| CCAAAATAACCGAACCGTAG+TGG | + | chr1_1:3877670-3877689 | Msa0002020:intron | 45.0% | |
| AGAAACGGCGAATGCAGTAT+AGG | - | chr1_1:3877832-3877851 | None:intergenic | 45.0% | |
| GCATAGATTCCGGTGAGAAA+CGG | - | chr1_1:3877847-3877866 | None:intergenic | 45.0% | |
| ACCGGAATCTATGCTTCTGA+AGG | + | chr1_1:3877853-3877872 | Msa0002020:CDS | 45.0% | |
| ! | CCCTTCAGAAGCATAGATTC+CGG | - | chr1_1:3877857-3877876 | None:intergenic | 45.0% |
| CCGGAATCTATGCTTCTGAA+GGG | + | chr1_1:3877854-3877873 | Msa0002020:CDS | 45.0% | |
| ! | GAATCTATGCTTCTGAAGGG+TGG | + | chr1_1:3877857-3877876 | Msa0002020:CDS | 45.0% |
| !! | TCTTTCTGGAACAGAACTGG+AGG | + | chr1_1:3878063-3878082 | Msa0002020:CDS | 45.0% |
| TGCGATCACAGTTGCAGATA+AGG | + | chr1_1:3878357-3878376 | Msa0002020:intron | 45.0% | |
| GATCACAGTTGCAGATAAGG+TGG | + | chr1_1:3878360-3878379 | Msa0002020:intron | 45.0% | |
| TCTCACTGCAATTGTGGTTG+TGG | + | chr1_1:3878465-3878484 | Msa0002020:intron | 45.0% | |
| AGCATAGCGTTGTAGCATAG+TGG | + | chr1_1:3878570-3878589 | Msa0002020:intron | 45.0% | |
| CCACATATCGCGGAAAATTG+TGG | - | chr1_1:3878608-3878627 | None:intergenic | 45.0% | |
| ! | CCACAATTTTCCGCGATATG+TGG | + | chr1_1:3878605-3878624 | Msa0002020:intron | 45.0% |
| TACGATTGGCGAACTGCATA+AGG | + | chr1_1:3878726-3878745 | Msa0002020:CDS | 45.0% | |
| ! | TTTTACATCGGCGTTGCAGA+GGG | - | chr1_1:3878753-3878772 | None:intergenic | 45.0% |
| TGCAACGCCGATGTAAAAGA+AGG | + | chr1_1:3878755-3878774 | Msa0002020:CDS | 45.0% | |
| ATTCCAACAAGGGATCTTGG+TGG | + | chr1_1:3878833-3878852 | Msa0002020:CDS | 45.0% | |
| GGAGCATGCATGGTTATGTA+AGG | + | chr1_1:3878897-3878916 | Msa0002020:CDS | 45.0% | |
| AGTGAATAGTCCAAGAGTCG+TGG | + | chr1_1:3879057-3879076 | Msa0002020:CDS | 45.0% | |
| !! | TTTTGTGCCACCCTTTTTCG+AGG | + | chr1_1:3879123-3879142 | Msa0002020:CDS | 45.0% |
| TCCAAAACCTCGAAAAAGGG+TGG | - | chr1_1:3879133-3879152 | None:intergenic | 45.0% | |
| !! | TTAATATAAATTTGATAAAT+AGG | - | chr1_1:3875678-3875697 | None:intergenic | 5.0% |
| !! | TTAATATAAATTTGATAAAT+AGG | - | chr1_1:3875678-3875697 | None:intergenic | 5.0% |
| ATTTCGCATCAGGGACATCG+AGG | + | chr1_1:3875788-3875807 | Msa0002020:intron | 50.0% | |
| ! | TTTTGCATCAGGGCCATCGA+GGG | + | chr1_1:3876111-3876130 | Msa0002020:intron | 50.0% |
| GTCCCTTGATGCGAAACATG+AGG | - | chr1_1:3876486-3876505 | None:intergenic | 50.0% | |
| AAACCGACATCAAACCGGTC+AGG | + | chr1_1:3877599-3877618 | Msa0002020:intron | 50.0% | |
| AAGAATGTCTCGCCGCAATC+AGG | - | chr1_1:3878047-3878066 | None:intergenic | 50.0% | |
| TTGCGGCGAGACATTCTTTC+TGG | + | chr1_1:3878049-3878068 | Msa0002020:CDS | 50.0% | |
| TGTTGGAACTTGGAAGCCTC+AGG | + | chr1_1:3878326-3878345 | Msa0002020:intron | 50.0% | |
| CTCTTCTATGCAGGCTCCAT+CGG | + | chr1_1:3878694-3878713 | Msa0002020:intron | 50.0% | |
| GCAGTTCGCCAATCGTAGTT+TGG | - | chr1_1:3878723-3878742 | None:intergenic | 50.0% | |
| ! | CTTTTACATCGGCGTTGCAG+AGG | - | chr1_1:3878754-3878773 | None:intergenic | 50.0% |
| GCGTTTCGGACGTATGTTTC+AGG | - | chr1_1:3878809-3878828 | None:intergenic | 50.0% | |
| TTGCCACCAAGATCCCTTGT+TGG | - | chr1_1:3878839-3878858 | None:intergenic | 50.0% | |
| ATGCATGCTCCCTGCGAAAA+AGG | - | chr1_1:3878888-3878907 | None:intergenic | 50.0% | |
| !! | TTTTTCGCAGGGAGCATGCA+TGG | + | chr1_1:3878887-3878906 | Msa0002020:CDS | 50.0% |
| !!! | GCCACCCTTTTTCGAGGTTT+TGG | + | chr1_1:3879129-3879148 | Msa0002020:CDS | 50.0% |
| ATTTCGCATCAGGGACATCG+AGG | + | chr1_1:3875788-3875807 | Msa0002020:intron | 50.0% | |
| ! | TTTTGCATCAGGGCCATCGA+GGG | + | chr1_1:3876111-3876130 | Msa0002020:intron | 50.0% |
| GTCCCTTGATGCGAAACATG+AGG | - | chr1_1:3876486-3876505 | None:intergenic | 50.0% | |
| AAACCGACATCAAACCGGTC+AGG | + | chr1_1:3877599-3877618 | Msa0002020:intron | 50.0% | |
| AAGAATGTCTCGCCGCAATC+AGG | - | chr1_1:3878047-3878066 | None:intergenic | 50.0% | |
| TTGCGGCGAGACATTCTTTC+TGG | + | chr1_1:3878049-3878068 | Msa0002020:CDS | 50.0% | |
| TGTTGGAACTTGGAAGCCTC+AGG | + | chr1_1:3878326-3878345 | Msa0002020:intron | 50.0% | |
| CTCTTCTATGCAGGCTCCAT+CGG | + | chr1_1:3878694-3878713 | Msa0002020:intron | 50.0% | |
| GCAGTTCGCCAATCGTAGTT+TGG | - | chr1_1:3878723-3878742 | None:intergenic | 50.0% | |
| ! | CTTTTACATCGGCGTTGCAG+AGG | - | chr1_1:3878754-3878773 | None:intergenic | 50.0% |
| GCGTTTCGGACGTATGTTTC+AGG | - | chr1_1:3878809-3878828 | None:intergenic | 50.0% | |
| TTGCCACCAAGATCCCTTGT+TGG | - | chr1_1:3878839-3878858 | None:intergenic | 50.0% | |
| ATGCATGCTCCCTGCGAAAA+AGG | - | chr1_1:3878888-3878907 | None:intergenic | 50.0% | |
| !! | TTTTTCGCAGGGAGCATGCA+TGG | + | chr1_1:3878887-3878906 | Msa0002020:CDS | 50.0% |
| !!! | GCCACCCTTTTTCGAGGTTT+TGG | + | chr1_1:3879129-3879148 | Msa0002020:CDS | 50.0% |
| ! | GTTTTGCATCAGGGCCATCG+AGG | + | chr1_1:3876110-3876129 | Msa0002020:intron | 55.0% |
| TTTCGCGTCAAGGGACATCG+AGG | + | chr1_1:3876777-3876796 | Msa0002020:intron | 55.0% | |
| TTCGCGTCAAGGGACATCGA+GGG | + | chr1_1:3876778-3876797 | Msa0002020:intron | 55.0% | |
| TCAAGGGACATCGAGGGACA+TGG | + | chr1_1:3876412-3876431 | Msa0002020:intron | 55.0% | |
| CTGCATTCGCCGTTTCTCAC+CGG | + | chr1_1:3877835-3877854 | Msa0002020:CDS | 55.0% | |
| ! | GTTTTGCATCAGGGCCATCG+AGG | + | chr1_1:3876110-3876129 | Msa0002020:intron | 55.0% |
| TTTCGCGTCAAGGGACATCG+AGG | + | chr1_1:3876777-3876796 | Msa0002020:intron | 55.0% | |
| TTCGCGTCAAGGGACATCGA+GGG | + | chr1_1:3876778-3876797 | Msa0002020:intron | 55.0% | |
| TCAAGGGACATCGAGGGACA+TGG | + | chr1_1:3876412-3876431 | Msa0002020:intron | 55.0% | |
| CTGCATTCGCCGTTTCTCAC+CGG | + | chr1_1:3877835-3877854 | Msa0002020:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 3875484 | 3879564 | 3875484 | ID=Msa0002020;Name=Msa0002020 |
| chr1_1 | mRNA | 3875484 | 3879564 | 3875484 | ID=Msa0002020-mRNA-1;Parent=Msa0002020;Name=Msa0002020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.33|0.25|0.75|0.66|0.75|4|195|375 |
| chr1_1 | exon | 3875484 | 3875486 | 3875484 | ID=Msa0002020-mRNA-1:exon:1129;Parent=Msa0002020-mRNA-1 |
| chr1_1 | exon | 3877329 | 3877459 | 3877329 | ID=Msa0002020-mRNA-1:exon:1130;Parent=Msa0002020-mRNA-1 |
| chr1_1 | exon | 3877771 | 3878101 | 3877771 | ID=Msa0002020-mRNA-1:exon:1131;Parent=Msa0002020-mRNA-1 |
| chr1_1 | exon | 3878707 | 3879564 | 3878707 | ID=Msa0002020-mRNA-1:exon:1132;Parent=Msa0002020-mRNA-1 |
| chr1_1 | CDS | 3875484 | 3875486 | 3875484 | ID=Msa0002020-mRNA-1:cds;Parent=Msa0002020-mRNA-1 |
| chr1_1 | CDS | 3877329 | 3877459 | 3877329 | ID=Msa0002020-mRNA-1:cds;Parent=Msa0002020-mRNA-1 |
| chr1_1 | CDS | 3877771 | 3878101 | 3877771 | ID=Msa0002020-mRNA-1:cds;Parent=Msa0002020-mRNA-1 |
| chr1_1 | CDS | 3878707 | 3879369 | 3878707 | ID=Msa0002020-mRNA-1:cds;Parent=Msa0002020-mRNA-1 |
| chr1_1 | three_prime_UTR | 3879370 | 3879564 | 3879370 | ID=Msa0002020-mRNA-1:three_prime_utr;Parent=Msa0002020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
