AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0006640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0006640 MtrunA17_Chr1g0149461 96.239 771 29 0 1 771 1 771 0.0 1449
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0006640 AT4G32190.1 46.574 788 390 11 1 771 1 774 9.88e-178 529

Find 163 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTAGCGTGCTATTGTTTC+TGG 0.076171 1_1:+9634803 Msa0006640:five_prime_UTR
ATTGATGTCTTCATTCTTAA+TGG 0.150281 1_1:-9637429 None:intergenic
CTTGAAGCGAAGCCATTTCT+TGG 0.183967 1_1:-9637025 None:intergenic
TTGTATTATTCAACTTATTT+TGG 0.204495 1_1:-9637337 None:intergenic
TTTCGTTCTCCACTTCTATT+TGG 0.209735 1_1:-9636875 None:intergenic
TTGTAATCTATTTGGCTAAA+AGG 0.210144 1_1:+9638125 Msa0006640:three_prime_UTR
GAAGAAAGAAAGAGCTTCTT+TGG 0.211625 1_1:+9636992 Msa0006640:CDS
CAAGGTTGCAGAGGCCTCTT+TGG 0.261894 1_1:+9636572 Msa0006640:CDS
GAATTCTCAGGTGACGGTTT+TGG 0.267150 1_1:-9634605 None:intergenic
ATCAATACCACTAAATGAAT+TGG 0.277257 1_1:+9637454 Msa0006640:CDS
TAAAATGACTCTTGCAAGAT+TGG 0.293172 1_1:+9637640 Msa0006640:CDS
ATCTTTCTCCCTTAACATAT+TGG 0.298583 1_1:-9637297 None:intergenic
GAAGGAGGCGACGGCTAGTT+TGG 0.320741 1_1:+9636236 Msa0006640:CDS
TTTGTATGTTGTAATCTATT+TGG 0.321922 1_1:+9638117 Msa0006640:three_prime_UTR
TCGAGAAGCCTAGCAGATTC+TGG 0.328588 1_1:-9635964 None:intergenic
TGCAGTTGTTGTGCTCTCTT+AGG 0.332854 1_1:+9635809 Msa0006640:intron
AGTCATAGCAATAGCGAATA+AGG 0.335485 1_1:-9634860 None:intergenic
TTCGTTCTCCACTTCTATTT+GGG 0.342748 1_1:-9636874 None:intergenic
TTTCGGCCTCGAAAGCCTTC+AGG 0.344280 1_1:-9637361 None:intergenic
CAGCTTTAATTTCACTCTCT+TGG 0.346685 1_1:-9636179 None:intergenic
CAAGCTAAAAGACATGTTAA+AGG 0.351508 1_1:+9638068 Msa0006640:exon
TGATCACCCAATTCATTTAG+TGG 0.352770 1_1:-9637461 None:intergenic
TTGAAGCAACCAATATGTTA+AGG 0.356086 1_1:+9637288 Msa0006640:CDS
GAGTCACAACAAAATTGATT+TGG 0.357750 1_1:-9635852 None:intergenic
TCTTAAGATCAGAGATTTCC+TGG 0.358030 1_1:-9637235 None:intergenic
TATCAATTGCATTGACTGTT+TGG 0.359145 1_1:+9637970 Msa0006640:CDS
GGAGAAGGAGGATCATTTAC+AGG 0.372000 1_1:+9636092 Msa0006640:CDS
AGGAAATGAAGCTCCGGCTT+AGG 0.372074 1_1:+9636280 Msa0006640:CDS
CTCTTCTCCTTCCTACTCTC+AGG 0.372331 1_1:+9634909 Msa0006640:CDS
AACTCGTTCAACCACAGTTT+CGG 0.374671 1_1:-9637378 None:intergenic
TGTGCTCTCTTAGGTACAAT+AGG 0.375275 1_1:+9635818 Msa0006640:CDS
GACTGGAAGAGGAGGCTTCA+AGG 0.376311 1_1:+9636640 Msa0006640:CDS
AAATTGAGCTTCTAGAATTA+CGG 0.387513 1_1:+9636478 Msa0006640:CDS
GGAAATGAAGCTCCGGCTTA+GGG 0.388122 1_1:+9636281 Msa0006640:CDS
GAAGAAAAGGTCGTTGGTTA+AGG 0.395609 1_1:+9635878 Msa0006640:CDS
GTCTGCGCTCATGGAATTGA+AGG 0.397775 1_1:+9636071 Msa0006640:CDS
GGCTTCTCTTCAGTCTCTCT+TGG 0.398610 1_1:+9637160 Msa0006640:CDS
TCAATTAATGATGCCACTTT+CGG 0.401307 1_1:+9637481 Msa0006640:CDS
TAAGATATTCACTTTGTTTG+CGG 0.405390 1_1:+9638179 Msa0006640:three_prime_UTR
GAGATGGAGAAAATGAAGAT+TGG 0.405764 1_1:+9636357 Msa0006640:CDS
GGAGGATCATTTACAGGAAG+TGG 0.406116 1_1:+9636098 Msa0006640:CDS
TGAAGCAACCAATATGTTAA+GGG 0.412520 1_1:+9637289 Msa0006640:CDS
AGCAGCAGAAGTCATTGCTT+TGG 0.413989 1_1:-9638410 None:intergenic
AGCAATCGCTTGCATCTTCT+AGG 0.416362 1_1:+9636751 Msa0006640:CDS
GAGAATCGGCGAGAAAACTA+TGG 0.417613 1_1:+9637751 Msa0006640:CDS
ACAACATGACACTTTCCCTT+TGG 0.422560 1_1:-9636830 None:intergenic
GGAGAAAATGAAGATTGGTT+TGG 0.423670 1_1:+9636362 Msa0006640:CDS
AAGTTGGACAACCGGATGAT+AGG 0.425017 1_1:+9636009 Msa0006640:CDS
ACGGAATGCGCTGTCTTTGA+AGG 0.430841 1_1:+9636329 Msa0006640:CDS
GGAGCAGGCTGTCCAAGAAA+TGG 0.430948 1_1:+9637013 Msa0006640:CDS
ATAGTGAGATTGATGGTTTA+CGG 0.431166 1_1:+9636310 Msa0006640:CDS
TTTGAATAAAGAACTCGAAC+AGG 0.433509 1_1:+9636923 Msa0006640:CDS
GCTAGTTTGGTTTCTCAAGC+TGG 0.442794 1_1:+9636249 Msa0006640:CDS
TTCTCTTCAGTCTCTCTTGG+AGG 0.443922 1_1:+9637163 Msa0006640:CDS
GGAGCTTATGAAGAAGTTAC+AGG 0.444266 1_1:+9636962 Msa0006640:CDS
TGCCAACTCAATTCACTAGT+AGG 0.444901 1_1:-9637509 None:intergenic
GATCGTGATAGTGAGATTGA+TGG 0.456862 1_1:+9636303 Msa0006640:CDS
TGATTCTGAGCTTAGACAAA+AGG 0.457472 1_1:+9636413 Msa0006640:CDS
TGATATTTGTGATTAAATTG+AGG 0.464943 1_1:-9637952 None:intergenic
TCAATACCACTAAATGAATT+GGG 0.468024 1_1:+9637455 Msa0006640:CDS
CGAGAAAACTATGGATGACT+TGG 0.468169 1_1:+9637760 Msa0006640:CDS
GTTGTGACTCAAGGAAGAAA+AGG 0.469931 1_1:+9635865 Msa0006640:CDS
CCAGGAATTGAAAACTGAAA+AGG 0.470099 1_1:+9637139 Msa0006640:CDS
GCAAGTACAAGAAGGGTTGT+TGG 0.471519 1_1:+9636782 Msa0006640:CDS
AGAAAGAGCTTCTTTGGAGC+AGG 0.472671 1_1:+9636998 Msa0006640:CDS
AGAACGAAAGAACAAAACTT+AGG 0.479483 1_1:+9636889 Msa0006640:CDS
GAGGCTTGAAGATGAGATGA+AGG 0.479878 1_1:+9636218 Msa0006640:CDS
AGGGTTGTTGGAACAGCAGC+TGG 0.480838 1_1:+9636794 Msa0006640:CDS
GGCTGAACTTGCAGACCAAA+GGG 0.481085 1_1:+9636815 Msa0006640:CDS
AGACACAGAAGTTGGACAAC+CGG 0.482352 1_1:+9636001 Msa0006640:CDS
ACAAGAGGAACTCGAGAGAC+TGG 0.485341 1_1:+9636623 Msa0006640:CDS
TTCTCAAGCTGGACAGATAG+AGG 0.486214 1_1:+9636260 Msa0006640:CDS
TACAAGCCTGAAGGCTTTCG+AGG 0.490119 1_1:+9637355 Msa0006640:CDS
TGCAAGATTGGATGCAAAAG+AGG 0.490164 1_1:+9637652 Msa0006640:CDS
TACAAAATGCAAGTACAAGA+AGG 0.505025 1_1:+9636774 Msa0006640:CDS
TGATGCTAAGCTACAAATCC+AGG 0.506835 1_1:+9637121 Msa0006640:CDS
GACTCAAAATCACGAAGATC+TGG 0.507607 1_1:-9636039 None:intergenic
GTTTGAGCAGACACAGAAGT+TGG 0.508360 1_1:+9635993 Msa0006640:CDS
GAGCAGCTTGTGATGGATGC+AGG 0.510253 1_1:+9638034 Msa0006640:CDS
GAGGTAGAAGAAGAATTCTC+AGG 0.511533 1_1:-9634617 None:intergenic
AGAAGCTTCTCAGTGATGTC+AGG 0.514810 1_1:+9636709 Msa0006640:CDS
AGCAGGAGTTGCTCGACTCT+CGG 0.517054 1_1:+9638003 Msa0006640:CDS
CACTATCACGATCCCTAAGC+CGG 0.519235 1_1:-9636293 None:intergenic
GCTATGACGCAGGAGAGAAT+CGG 0.519440 1_1:+9637737 Msa0006640:CDS
GGAGGCTTCAAGGCATGCAC+AGG 0.519791 1_1:+9636650 Msa0006640:CDS
GAACGAAAGAACAAAACTTA+GGG 0.519943 1_1:+9636890 Msa0006640:CDS
AAACTTGAAAACAAAGGAGA+TGG 0.522636 1_1:+9637571 Msa0006640:CDS
ACGTCTATCCGTGGCTGCGA+GGG 0.526538 1_1:+9636530 Msa0006640:CDS
TAGCTATCAGCTTCAACGCT+CGG 0.528239 1_1:-9637896 None:intergenic
CTAGTAGGGTCCTCCGAAAG+TGG 0.529235 1_1:-9637494 None:intergenic
AACGGTGTATGCTATGACGC+AGG 0.530236 1_1:+9637727 Msa0006640:CDS
GTCTTTGAAGGAAGAAGAGA+TGG 0.530883 1_1:+9636341 Msa0006640:CDS
TATCTGTCATGTATTTGTGC+AGG 0.534353 1_1:+9638220 Msa0006640:three_prime_UTR
TGGCTGAACTTGCAGACCAA+AGG 0.536581 1_1:+9636814 Msa0006640:CDS
ACAGGATTTGTCCGTAGAGA+AGG 0.537064 1_1:+9636941 Msa0006640:CDS
ACTTGGAACTTTCAAGTGCT+AGG 0.537214 1_1:+9637192 Msa0006640:CDS
CTTCATAAGCTCCTTCTCTA+CGG 0.541192 1_1:-9636952 None:intergenic
CTGACTCTTTGACATCAAGA+AGG 0.541859 1_1:-9637091 None:intergenic
CTGGTTCCTCTCCTATCATC+CGG 0.543300 1_1:-9636020 None:intergenic
TTCAACATCCCTCGCAGCCA+CGG 0.543338 1_1:-9636538 None:intergenic
AGATGCTAATGATCATAAAA+CGG 0.546597 1_1:+9637709 Msa0006640:CDS
AATTGAGAAGCTTCAGCTTG+AGG 0.546672 1_1:+9637784 Msa0006640:CDS
GGAAAGTGTCATGTTGTACA+TGG 0.547682 1_1:+9636836 Msa0006640:CDS
AAAGCTGAAGGATGCGAAAG+AGG 0.552340 1_1:+9636146 Msa0006640:CDS
GCCAACTCAATTCACTAGTA+GGG 0.553485 1_1:-9637508 None:intergenic
TTTGGCTAAAAGGCATTGCA+AGG 0.554688 1_1:+9638135 Msa0006640:three_prime_UTR
ACCCTACTAGTGAATTGAGT+TGG 0.555028 1_1:+9637507 Msa0006640:CDS
GAAGAAGAATTCTCAGGTGA+CGG 0.555435 1_1:-9634611 None:intergenic
AGATAGAGGAAATGAAGCTC+CGG 0.558398 1_1:+9636274 Msa0006640:CDS
GGAAGAGTTGAGAAAAGCAA+AGG 0.558851 1_1:+9637673 Msa0006640:CDS
GTGGCTGCGAGGGATGTTGA+AGG 0.560868 1_1:+9636540 Msa0006640:CDS
TTCAAGTGCTAGGAAGATGC+TGG 0.563574 1_1:+9637202 Msa0006640:CDS
ATCAGCTTCAACGCTCGGCA+TGG 0.566649 1_1:-9637891 None:intergenic
GAAAGATGCCCAAATAGAAG+TGG 0.571824 1_1:+9636866 Msa0006640:CDS
GGAACTCGAGAGACTGGAAG+AGG 0.572397 1_1:+9636629 Msa0006640:CDS
TTGCATTGACTGTTTGGCTG+TGG 0.572710 1_1:+9637976 Msa0006640:CDS
TGTCATATACACTAGTGGAA+TGG 0.573280 1_1:-9638329 None:intergenic
GTCGATGGAGGGAAAAGTAA+TGG 0.577304 1_1:-9634724 None:intergenic
CTCAAGGAAGAAAAGGTCGT+TGG 0.577956 1_1:+9635872 Msa0006640:CDS
GAAGTAACAAACCTGAGAGT+AGG 0.578102 1_1:-9634920 None:intergenic
AAACAATAGCACGCTAGCGT+TGG 0.578954 1_1:-9634799 None:intergenic
GTTGGAGAATGGAAAGCTGA+AGG 0.579685 1_1:+9636134 Msa0006640:CDS
GTGCAAAATGCATTTACAGA+AGG 0.579759 1_1:-9634838 None:intergenic
TCTCTTGGAGGAGAAAGACT+TGG 0.581096 1_1:+9637175 Msa0006640:CDS
CTGTCATGTATTTGTGCAGG+TGG 0.584392 1_1:+9638223 Msa0006640:three_prime_UTR
CTGAGAGTAGGAAGGAGAAG+AGG 0.586906 1_1:-9634908 None:intergenic
GGCTTTCGAGGCCGAAACTG+TGG 0.587517 1_1:+9637367 Msa0006640:CDS
AGAAATGGCTTCGCTTCAAG+AGG 0.591969 1_1:+9637028 Msa0006640:CDS
TACGTCTATCCGTGGCTGCG+AGG 0.593135 1_1:+9636529 Msa0006640:CDS
ATGGAGCGCCAGAATCTGCT+AGG 0.595279 1_1:+9635956 Msa0006640:CDS
GCTCCATAATTGTTAAAACT+AGG 0.598816 1_1:-9635940 None:intergenic
ACAAAATGCAAGTACAAGAA+GGG 0.599552 1_1:+9636775 Msa0006640:CDS
GTTGAATAATACAAGCCTGA+AGG 0.600888 1_1:+9637346 Msa0006640:CDS
ATTAATGATGCCACTTTCGG+AGG 0.601136 1_1:+9637484 Msa0006640:CDS
GAGTAGGAAGGAGAAGAGGT+AGG 0.602593 1_1:-9634904 None:intergenic
AAAGGTCGTTGGTTAAGGAA+TGG 0.604287 1_1:+9635883 Msa0006640:CDS
GCTCATGGAATTGAAGGAGA+AGG 0.604339 1_1:+9636077 Msa0006640:CDS
TAACAAACCTGAGAGTAGGA+AGG 0.606825 1_1:-9634916 None:intergenic
TGGAAAAGCACACGATGGAG+TGG 0.609324 1_1:+9636592 Msa0006640:CDS
AGCTCTAACAATAAAAGATG+AGG 0.610854 1_1:+9637613 Msa0006640:CDS
GGAGTGGTTGTTAACACAAG+AGG 0.610855 1_1:+9636608 Msa0006640:CDS
ACTCGAGAGACTGGAAGAGG+AGG 0.617723 1_1:+9636632 Msa0006640:CDS
CAAGGAAAACTTGAAAACAA+AGG 0.617778 1_1:+9637565 Msa0006640:CDS
AGATGAGATGAAGGAGGCGA+CGG 0.624465 1_1:+9636227 Msa0006640:CDS
TGACTCTTTGACATCAAGAA+GGG 0.625792 1_1:-9637090 None:intergenic
GATGCTGGTGGAACTAAACC+AGG 0.625978 1_1:+9637217 Msa0006640:CDS
GGAGAAAGATGACCATGTGA+AGG 0.626967 1_1:+9637310 Msa0006640:CDS
TGTTTGGCTGTGGTAAAAGC+AGG 0.636480 1_1:+9637986 Msa0006640:CDS
ATTGACAGAGCAGCTTGTGA+TGG 0.636680 1_1:+9638027 Msa0006640:CDS
CATGGAATTGAAGGAGAAGG+AGG 0.638231 1_1:+9636080 Msa0006640:CDS
AAACGCTAGAGAATTTCAGA+AGG 0.644568 1_1:+9636682 Msa0006640:CDS
CTGCTCGCGAGAAGTATGAG+AGG 0.645894 1_1:+9636199 Msa0006640:CDS
GTTGAGAAAAGCAAAGGACA+TGG 0.655159 1_1:+9637679 Msa0006640:CDS
AAGTGCTAGGAAGATGCTGG+TGG 0.655984 1_1:+9637205 Msa0006640:CDS
AGAAGAACTACGTCTATCCG+TGG 0.663326 1_1:+9636521 Msa0006640:CDS
TACAACGTTCCTCTGTGACG+TGG 0.671813 1_1:-9638094 None:intergenic
GCTTGAAGATGAGATGAAGG+AGG 0.679304 1_1:+9636221 Msa0006640:CDS
GGACAACCGGATGATAGGAG+AGG 0.688688 1_1:+9636014 Msa0006640:CDS
GCTTATGAAGAAGTTACAGG+AGG 0.689307 1_1:+9636965 Msa0006640:CDS
CTCTTTGGAAAAGCACACGA+TGG 0.698049 1_1:+9636587 Msa0006640:CDS
AACGCTAGAGAATTTCAGAA+GGG 0.699020 1_1:+9636683 Msa0006640:CDS
GAATGTGCTTGAGTTGACCA+AGG 0.746422 1_1:+9637547 Msa0006640:CDS
TAAAGGACGCCACGTCACAG+AGG 0.758128 1_1:+9638085 Msa0006640:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTCAACTAAAAAAAT+TGG + chr1_1:9635268-9635287 Msa0006640:intron 10.0%
!!! TCAATATTTTAAAGCAAAAT+TGG + chr1_1:9635588-9635607 Msa0006640:intron 15.0%
!! TCTATATTATGTATAACTTA+TGG + chr1_1:9635669-9635688 Msa0006640:intron 15.0%
!!! TTGTATTATTCAACTTATTT+TGG - chr1_1:9637340-9637359 None:intergenic 15.0%
!!! TATTAATACTGTTTCTGTTA+CGG + chr1_1:9635074-9635093 Msa0006640:intron 20.0%
!! TTGATTCTGTAAAAAATTCA+AGG + chr1_1:9635391-9635410 Msa0006640:intron 20.0%
!! TATGAATGATGAATATTGAT+CGG + chr1_1:9635756-9635775 Msa0006640:intron 20.0%
!!! TATAAAAAGTGCTGAATTTA+AGG + chr1_1:9637058-9637077 Msa0006640:CDS 20.0%
!! TGATATTTGTGATTAAATTG+AGG - chr1_1:9637955-9637974 None:intergenic 20.0%
!! TTTGTATGTTGTAATCTATT+TGG + chr1_1:9638117-9638136 Msa0006640:three_prime_UTR 20.0%
!!! AAGAAAAAGTTTTGTTTGAG+AGG - chr1_1:9634639-9634658 None:intergenic 25.0%
!! CTACTACTATTAAACTTTTG+TGG + chr1_1:9634667-9634686 Msa0006640:five_prime_UTR 25.0%
!! CAAAAGGTATATTGAAAAAG+AGG - chr1_1:9634949-9634968 None:intergenic 25.0%
! AAGGAAACAGAAAAAACAAA+AGG - chr1_1:9634965-9634984 None:intergenic 25.0%
!! TCAAAATCAATTTTTGTCAC+GGG - chr1_1:9635351-9635370 None:intergenic 25.0%
!! GTCAAAATCAATTTTTGTCA+CGG - chr1_1:9635352-9635371 None:intergenic 25.0%
! GTAAAAAATTCAAGGTAAAG+TGG + chr1_1:9635399-9635418 Msa0006640:intron 25.0%
!!! TACACTTGAACTCATTTTTT+AGG - chr1_1:9635447-9635466 None:intergenic 25.0%
!!! TGAATTGATTTTGACATGTT+TGG - chr1_1:9635524-9635543 None:intergenic 25.0%
!! TGTGAATTTATTGTGCTTTT+AGG + chr1_1:9635645-9635664 Msa0006640:intron 25.0%
!!! AGACCTAGTTTTAACAATTA+TGG + chr1_1:9635937-9635956 Msa0006640:CDS 25.0%
!!! AAATTGAGCTTCTAGAATTA+CGG + chr1_1:9636478-9636497 Msa0006640:CDS 25.0%
! ATTGATGTCTTCATTCTTAA+TGG - chr1_1:9637432-9637451 None:intergenic 25.0%
! ATCAATACCACTAAATGAAT+TGG + chr1_1:9637454-9637473 Msa0006640:CDS 25.0%
! TCAATACCACTAAATGAATT+GGG + chr1_1:9637455-9637474 Msa0006640:CDS 25.0%
! AGATGCTAATGATCATAAAA+CGG + chr1_1:9637709-9637728 Msa0006640:CDS 25.0%
! TTGTAATCTATTTGGCTAAA+AGG + chr1_1:9638125-9638144 Msa0006640:three_prime_UTR 25.0%
!!! ATCTTATAACCTACTTTTTG+TGG - chr1_1:9638165-9638184 None:intergenic 25.0%
!! TAAGATATTCACTTTGTTTG+CGG + chr1_1:9638179-9638198 Msa0006640:three_prime_UTR 25.0%
!! TATTTTGTCATATACACTAG+TGG - chr1_1:9638337-9638356 None:intergenic 25.0%
AAGAGAAAAAAAGATGTCGA+TGG - chr1_1:9634742-9634761 None:intergenic 30.0%
GCGTACATAAAAAATAACGA+AGG - chr1_1:9634984-9635003 None:intergenic 30.0%
!! TGTTACTTCAGTTAGTGTTT+TGG + chr1_1:9635321-9635340 Msa0006640:intron 30.0%
TTAATGCAAGTTTGATGAGT+AGG + chr1_1:9635726-9635745 Msa0006640:intron 30.0%
TAATGCAAGTTTGATGAGTA+GGG + chr1_1:9635727-9635746 Msa0006640:intron 30.0%
ATATTGATCGGATCATGATT+TGG + chr1_1:9635768-9635787 Msa0006640:intron 30.0%
GAGTCACAACAAAATTGATT+TGG - chr1_1:9635855-9635874 None:intergenic 30.0%
!! ATCAATTTTGTTGTGACTCA+AGG + chr1_1:9635856-9635875 Msa0006640:CDS 30.0%
GCTCCATAATTGTTAAAACT+AGG - chr1_1:9635943-9635962 None:intergenic 30.0%
! ATAGTGAGATTGATGGTTTA+CGG + chr1_1:9636310-9636329 Msa0006640:CDS 30.0%
TACAAAATGCAAGTACAAGA+AGG + chr1_1:9636774-9636793 Msa0006640:CDS 30.0%
ACAAAATGCAAGTACAAGAA+GGG + chr1_1:9636775-9636794 Msa0006640:CDS 30.0%
AGAACGAAAGAACAAAACTT+AGG + chr1_1:9636889-9636908 Msa0006640:CDS 30.0%
GAACGAAAGAACAAAACTTA+GGG + chr1_1:9636890-9636909 Msa0006640:CDS 30.0%
TTTGAATAAAGAACTCGAAC+AGG + chr1_1:9636923-9636942 Msa0006640:CDS 30.0%
TTGAAGCAACCAATATGTTA+AGG + chr1_1:9637288-9637307 Msa0006640:CDS 30.0%
TGAAGCAACCAATATGTTAA+GGG + chr1_1:9637289-9637308 Msa0006640:CDS 30.0%
ATCTTTCTCCCTTAACATAT+TGG - chr1_1:9637300-9637319 None:intergenic 30.0%
!! TATTTTGGATTACCTTCACA+TGG - chr1_1:9637325-9637344 None:intergenic 30.0%
!! TCAATTAATGATGCCACTTT+CGG + chr1_1:9637481-9637500 Msa0006640:CDS 30.0%
!! AATTGAGTTGGCAACAAAAA+CGG + chr1_1:9637519-9637538 Msa0006640:CDS 30.0%
!!! CTTTGTTTTCAAGTTTTCCT+TGG - chr1_1:9637567-9637586 None:intergenic 30.0%
CAAGGAAAACTTGAAAACAA+AGG + chr1_1:9637565-9637584 Msa0006640:CDS 30.0%
AAACTTGAAAACAAAGGAGA+TGG + chr1_1:9637571-9637590 Msa0006640:CDS 30.0%
! AGCTCTAACAATAAAAGATG+AGG + chr1_1:9637613-9637632 Msa0006640:CDS 30.0%
TAAAATGACTCTTGCAAGAT+TGG + chr1_1:9637640-9637659 Msa0006640:CDS 30.0%
!! TATCAATTGCATTGACTGTT+TGG + chr1_1:9637970-9637989 Msa0006640:CDS 30.0%
CAAGCTAAAAGACATGTTAA+AGG + chr1_1:9638068-9638087 Msa0006640:exon 30.0%
GAAAAAAAGATGTCGATGGA+GGG - chr1_1:9634738-9634757 None:intergenic 35.0%
AGAAAAAAAGATGTCGATGG+AGG - chr1_1:9634739-9634758 None:intergenic 35.0%
GTGCAAAATGCATTTACAGA+AGG - chr1_1:9634841-9634860 None:intergenic 35.0%
AGTCATAGCAATAGCGAATA+AGG - chr1_1:9634863-9634882 None:intergenic 35.0%
!! GGTAAAGTGGTGTTTTTGTT+TGG + chr1_1:9635412-9635431 Msa0006640:intron 35.0%
AATTGGTGAATTGTGAGATG+TGG + chr1_1:9635605-9635624 Msa0006640:intron 35.0%
!! AGATCTTCGTGATTTTGAGT+CGG + chr1_1:9636041-9636060 Msa0006640:CDS 35.0%
!! AGAACTGTTTTGTTGGAGAA+TGG + chr1_1:9636123-9636142 Msa0006640:CDS 35.0%
! CAGCTTTAATTTCACTCTCT+TGG - chr1_1:9636182-9636201 None:intergenic 35.0%
GAGATGGAGAAAATGAAGAT+TGG + chr1_1:9636357-9636376 Msa0006640:CDS 35.0%
! GGAGAAAATGAAGATTGGTT+TGG + chr1_1:9636362-9636381 Msa0006640:CDS 35.0%
TGATTCTGAGCTTAGACAAA+AGG + chr1_1:9636413-9636432 Msa0006640:CDS 35.0%
TGTTGAAGGAGAAAAACTCA+AGG + chr1_1:9636554-9636573 Msa0006640:CDS 35.0%
AAACGCTAGAGAATTTCAGA+AGG + chr1_1:9636682-9636701 Msa0006640:CDS 35.0%
AACGCTAGAGAATTTCAGAA+GGG + chr1_1:9636683-9636702 Msa0006640:CDS 35.0%
TTCGTTCTCCACTTCTATTT+GGG - chr1_1:9636877-9636896 None:intergenic 35.0%
TTTCGTTCTCCACTTCTATT+TGG - chr1_1:9636878-9636897 None:intergenic 35.0%
GAAGAAAGAAAGAGCTTCTT+TGG + chr1_1:9636992-9637011 Msa0006640:CDS 35.0%
TGACTCTTTGACATCAAGAA+GGG - chr1_1:9637093-9637112 None:intergenic 35.0%
! CCTTTTCAGTTTTCAATTCC+TGG - chr1_1:9637142-9637161 None:intergenic 35.0%
CCAGGAATTGAAAACTGAAA+AGG + chr1_1:9637139-9637158 Msa0006640:CDS 35.0%
TCTTAAGATCAGAGATTTCC+TGG - chr1_1:9637238-9637257 None:intergenic 35.0%
GTTGAATAATACAAGCCTGA+AGG + chr1_1:9637346-9637365 Msa0006640:CDS 35.0%
TGATCACCCAATTCATTTAG+TGG - chr1_1:9637464-9637483 None:intergenic 35.0%
! GAGTCAACAACTTTTGAACA+AGG + chr1_1:9637868-9637887 Msa0006640:CDS 35.0%
CAAGGTTAACCACAAAAAGT+AGG + chr1_1:9638153-9638172 Msa0006640:three_prime_UTR 35.0%
TATCTGTCATGTATTTGTGC+AGG + chr1_1:9638220-9638239 Msa0006640:three_prime_UTR 35.0%
TGTCATATACACTAGTGGAA+TGG - chr1_1:9638332-9638351 None:intergenic 35.0%
! TTTTCTGCATTCAACTACTC+TGG + chr1_1:9638380-9638399 Msa0006640:three_prime_UTR 35.0%
GAAGAAGAATTCTCAGGTGA+CGG - chr1_1:9634614-9634633 None:intergenic 40.0%
GAGGTAGAAGAAGAATTCTC+AGG - chr1_1:9634620-9634639 None:intergenic 40.0%
TAACAAACCTGAGAGTAGGA+AGG - chr1_1:9634919-9634938 None:intergenic 40.0%
GAAGTAACAAACCTGAGAGT+AGG - chr1_1:9634923-9634942 None:intergenic 40.0%
! CTGTTACGGACTGTGATTTA+CGG + chr1_1:9635088-9635107 Msa0006640:intron 40.0%
GTGAATTGTGAGATGTGGAA+TGG + chr1_1:9635610-9635629 Msa0006640:intron 40.0%
! GATCGGATCATGATTTGGAA+TGG + chr1_1:9635773-9635792 Msa0006640:intron 40.0%
TGTGCTCTCTTAGGTACAAT+AGG + chr1_1:9635818-9635837 Msa0006640:CDS 40.0%
GTTGTGACTCAAGGAAGAAA+AGG + chr1_1:9635865-9635884 Msa0006640:CDS 40.0%
! GAAGAAAAGGTCGTTGGTTA+AGG + chr1_1:9635878-9635897 Msa0006640:CDS 40.0%
! AAAGGTCGTTGGTTAAGGAA+TGG + chr1_1:9635883-9635902 Msa0006640:CDS 40.0%
GACTCAAAATCACGAAGATC+TGG - chr1_1:9636042-9636061 None:intergenic 40.0%
! AGTGGAGAGAACTGTTTTGT+TGG + chr1_1:9636116-9636135 Msa0006640:CDS 40.0%
AGATAGAGGAAATGAAGCTC+CGG + chr1_1:9636274-9636293 Msa0006640:CDS 40.0%
! GATCGTGATAGTGAGATTGA+TGG + chr1_1:9636303-9636322 Msa0006640:CDS 40.0%
! GTCTTTGAAGGAAGAAGAGA+TGG + chr1_1:9636341-9636360 Msa0006640:CDS 40.0%
AGAAAAACTCAAGGTTGCAG+AGG + chr1_1:9636563-9636582 Msa0006640:CDS 40.0%
ACAACATGACACTTTCCCTT+TGG - chr1_1:9636833-9636852 None:intergenic 40.0%
!! GGAAAGTGTCATGTTGTACA+TGG + chr1_1:9636836-9636855 Msa0006640:CDS 40.0%
GAAAGATGCCCAAATAGAAG+TGG + chr1_1:9636866-9636885 Msa0006640:CDS 40.0%
CTTCATAAGCTCCTTCTCTA+CGG - chr1_1:9636955-9636974 None:intergenic 40.0%
GGAGCTTATGAAGAAGTTAC+AGG + chr1_1:9636962-9636981 Msa0006640:CDS 40.0%
GCTTATGAAGAAGTTACAGG+AGG + chr1_1:9636965-9636984 Msa0006640:CDS 40.0%
CTGACTCTTTGACATCAAGA+AGG - chr1_1:9637094-9637113 None:intergenic 40.0%
TGATGCTAAGCTACAAATCC+AGG + chr1_1:9637121-9637140 Msa0006640:CDS 40.0%
! ACTTGGAACTTTCAAGTGCT+AGG + chr1_1:9637192-9637211 Msa0006640:CDS 40.0%
AACTCGTTCAACCACAGTTT+CGG - chr1_1:9637381-9637400 None:intergenic 40.0%
!! ATTAATGATGCCACTTTCGG+AGG + chr1_1:9637484-9637503 Msa0006640:CDS 40.0%
ACCCTACTAGTGAATTGAGT+TGG + chr1_1:9637507-9637526 Msa0006640:CDS 40.0%
GCCAACTCAATTCACTAGTA+GGG - chr1_1:9637511-9637530 None:intergenic 40.0%
TGCCAACTCAATTCACTAGT+AGG - chr1_1:9637512-9637531 None:intergenic 40.0%
TGCAAGATTGGATGCAAAAG+AGG + chr1_1:9637652-9637671 Msa0006640:CDS 40.0%
GGAAGAGTTGAGAAAAGCAA+AGG + chr1_1:9637673-9637692 Msa0006640:CDS 40.0%
GTTGAGAAAAGCAAAGGACA+TGG + chr1_1:9637679-9637698 Msa0006640:CDS 40.0%
CGAGAAAACTATGGATGACT+TGG + chr1_1:9637760-9637779 Msa0006640:CDS 40.0%
AATTGAGAAGCTTCAGCTTG+AGG + chr1_1:9637784-9637803 Msa0006640:CDS 40.0%
!! TTTGGCTAAAAGGCATTGCA+AGG + chr1_1:9638135-9638154 Msa0006640:three_prime_UTR 40.0%
!! GAATTCTCAGGTGACGGTTT+TGG - chr1_1:9634608-9634627 None:intergenic 45.0%
GTCGATGGAGGGAAAAGTAA+TGG - chr1_1:9634727-9634746 None:intergenic 45.0%
AAACAATAGCACGCTAGCGT+TGG - chr1_1:9634802-9634821 None:intergenic 45.0%
TTCCACATCTCACTGTTCGA+AGG + chr1_1:9635548-9635567 Msa0006640:intron 45.0%
TCCACATCTCACTGTTCGAA+GGG + chr1_1:9635549-9635568 Msa0006640:intron 45.0%
GCAAGTTTGATGAGTAGGGT+TGG + chr1_1:9635731-9635750 Msa0006640:intron 45.0%
TGCAGTTGTTGTGCTCTCTT+AGG + chr1_1:9635809-9635828 Msa0006640:intron 45.0%
CTCAAGGAAGAAAAGGTCGT+TGG + chr1_1:9635872-9635891 Msa0006640:CDS 45.0%
GTTTGAGCAGACACAGAAGT+TGG + chr1_1:9635993-9636012 Msa0006640:CDS 45.0%
AGACACAGAAGTTGGACAAC+CGG + chr1_1:9636001-9636020 Msa0006640:CDS 45.0%
AAGTTGGACAACCGGATGAT+AGG + chr1_1:9636009-9636028 Msa0006640:CDS 45.0%
GCTCATGGAATTGAAGGAGA+AGG + chr1_1:9636077-9636096 Msa0006640:CDS 45.0%
CATGGAATTGAAGGAGAAGG+AGG + chr1_1:9636080-9636099 Msa0006640:CDS 45.0%
GGAGAAGGAGGATCATTTAC+AGG + chr1_1:9636092-9636111 Msa0006640:CDS 45.0%
GGAGGATCATTTACAGGAAG+TGG + chr1_1:9636098-9636117 Msa0006640:CDS 45.0%
GTTGGAGAATGGAAAGCTGA+AGG + chr1_1:9636134-9636153 Msa0006640:CDS 45.0%
AAAGCTGAAGGATGCGAAAG+AGG + chr1_1:9636146-9636165 Msa0006640:CDS 45.0%
GAGGCTTGAAGATGAGATGA+AGG + chr1_1:9636218-9636237 Msa0006640:CDS 45.0%
GCTTGAAGATGAGATGAAGG+AGG + chr1_1:9636221-9636240 Msa0006640:CDS 45.0%
! GCTAGTTTGGTTTCTCAAGC+TGG + chr1_1:9636249-9636268 Msa0006640:CDS 45.0%
TTCTCAAGCTGGACAGATAG+AGG + chr1_1:9636260-9636279 Msa0006640:CDS 45.0%
AGAAGAACTACGTCTATCCG+TGG + chr1_1:9636521-9636540 Msa0006640:CDS 45.0%
! CATCGTGTGCTTTTCCAAAG+AGG - chr1_1:9636589-9636608 None:intergenic 45.0%
! CTCTTTGGAAAAGCACACGA+TGG + chr1_1:9636587-9636606 Msa0006640:CDS 45.0%
GGAGTGGTTGTTAACACAAG+AGG + chr1_1:9636608-9636627 Msa0006640:CDS 45.0%
AGAAGCTTCTCAGTGATGTC+AGG + chr1_1:9636709-9636728 Msa0006640:CDS 45.0%
AGCAATCGCTTGCATCTTCT+AGG + chr1_1:9636751-9636770 Msa0006640:CDS 45.0%
GCAAGTACAAGAAGGGTTGT+TGG + chr1_1:9636782-9636801 Msa0006640:CDS 45.0%
ACAGGATTTGTCCGTAGAGA+AGG + chr1_1:9636941-9636960 Msa0006640:CDS 45.0%
!! AGAAAGAGCTTCTTTGGAGC+AGG + chr1_1:9636998-9637017 Msa0006640:CDS 45.0%
CTTGAAGCGAAGCCATTTCT+TGG - chr1_1:9637028-9637047 None:intergenic 45.0%
AGAAATGGCTTCGCTTCAAG+AGG + chr1_1:9637028-9637047 Msa0006640:CDS 45.0%
TTCTCTTCAGTCTCTCTTGG+AGG + chr1_1:9637163-9637182 Msa0006640:CDS 45.0%
TCTCTTGGAGGAGAAAGACT+TGG + chr1_1:9637175-9637194 Msa0006640:CDS 45.0%
TTCAAGTGCTAGGAAGATGC+TGG + chr1_1:9637202-9637221 Msa0006640:CDS 45.0%
GGAGAAAGATGACCATGTGA+AGG + chr1_1:9637310-9637329 Msa0006640:CDS 45.0%
!! GAATGTGCTTGAGTTGACCA+AGG + chr1_1:9637547-9637566 Msa0006640:CDS 45.0%
GAGAATCGGCGAGAAAACTA+TGG + chr1_1:9637751-9637770 Msa0006640:CDS 45.0%
TAGCTATCAGCTTCAACGCT+CGG - chr1_1:9637899-9637918 None:intergenic 45.0%
!! TTGCATTGACTGTTTGGCTG+TGG + chr1_1:9637976-9637995 Msa0006640:CDS 45.0%
TGTTTGGCTGTGGTAAAAGC+AGG + chr1_1:9637986-9638005 Msa0006640:CDS 45.0%
ATTGACAGAGCAGCTTGTGA+TGG + chr1_1:9638027-9638046 Msa0006640:CDS 45.0%
CTGTCATGTATTTGTGCAGG+TGG + chr1_1:9638223-9638242 Msa0006640:three_prime_UTR 45.0%
AGCAGCAGAAGTCATTGCTT+TGG - chr1_1:9638413-9638432 None:intergenic 45.0%
! CGCTAGCGTGCTATTGTTTC+TGG + chr1_1:9634803-9634822 Msa0006640:five_prime_UTR 50.0%
GAGTAGGAAGGAGAAGAGGT+AGG - chr1_1:9634907-9634926 None:intergenic 50.0%
CTGAGAGTAGGAAGGAGAAG+AGG - chr1_1:9634911-9634930 None:intergenic 50.0%
CTCTTCTCCTTCCTACTCTC+AGG + chr1_1:9634909-9634928 Msa0006640:CDS 50.0%
TCCCTTCGAACAGTGAGATG+TGG - chr1_1:9635553-9635572 None:intergenic 50.0%
TCGAGAAGCCTAGCAGATTC+TGG - chr1_1:9635967-9635986 None:intergenic 50.0%
CTGGTTCCTCTCCTATCATC+CGG - chr1_1:9636023-9636042 None:intergenic 50.0%
! GGATCTTTTGTCTGCGCTCA+TGG + chr1_1:9636062-9636081 Msa0006640:CDS 50.0%
GTCTGCGCTCATGGAATTGA+AGG + chr1_1:9636071-9636090 Msa0006640:CDS 50.0%
AGATGAGATGAAGGAGGCGA+CGG + chr1_1:9636227-9636246 Msa0006640:CDS 50.0%
AGGAAATGAAGCTCCGGCTT+AGG + chr1_1:9636280-9636299 Msa0006640:CDS 50.0%
GGAAATGAAGCTCCGGCTTA+GGG + chr1_1:9636281-9636300 Msa0006640:CDS 50.0%
CACTATCACGATCCCTAAGC+CGG - chr1_1:9636296-9636315 None:intergenic 50.0%
ACGGAATGCGCTGTCTTTGA+AGG + chr1_1:9636329-9636348 Msa0006640:CDS 50.0%
! TGGAAAAGCACACGATGGAG+TGG + chr1_1:9636592-9636611 Msa0006640:CDS 50.0%
ACAAGAGGAACTCGAGAGAC+TGG + chr1_1:9636623-9636642 Msa0006640:CDS 50.0%
TGGCTGAACTTGCAGACCAA+AGG + chr1_1:9636814-9636833 Msa0006640:CDS 50.0%
GGCTGAACTTGCAGACCAAA+GGG + chr1_1:9636815-9636834 Msa0006640:CDS 50.0%
GGCTTCTCTTCAGTCTCTCT+TGG + chr1_1:9637160-9637179 Msa0006640:CDS 50.0%
AAGTGCTAGGAAGATGCTGG+TGG + chr1_1:9637205-9637224 Msa0006640:CDS 50.0%
GATGCTGGTGGAACTAAACC+AGG + chr1_1:9637217-9637236 Msa0006640:CDS 50.0%
TACAAGCCTGAAGGCTTTCG+AGG + chr1_1:9637355-9637374 Msa0006640:CDS 50.0%
GAGTTGGCAACAAAAACGGC+TGG + chr1_1:9637523-9637542 Msa0006640:CDS 50.0%
AACGGTGTATGCTATGACGC+AGG + chr1_1:9637727-9637746 Msa0006640:CDS 50.0%
GCTATGACGCAGGAGAGAAT+CGG + chr1_1:9637737-9637756 Msa0006640:CDS 50.0%
TACAACGTTCCTCTGTGACG+TGG - chr1_1:9638097-9638116 None:intergenic 50.0%
! ATGGAGCGCCAGAATCTGCT+AGG + chr1_1:9635956-9635975 Msa0006640:CDS 55.0%
GGACAACCGGATGATAGGAG+AGG + chr1_1:9636014-9636033 Msa0006640:CDS 55.0%
! CTGCTCGCGAGAAGTATGAG+AGG + chr1_1:9636199-9636218 Msa0006640:CDS 55.0%
TTCAACATCCCTCGCAGCCA+CGG - chr1_1:9636541-9636560 None:intergenic 55.0%
CAAGGTTGCAGAGGCCTCTT+TGG + chr1_1:9636572-9636591 Msa0006640:CDS 55.0%
GGAACTCGAGAGACTGGAAG+AGG + chr1_1:9636629-9636648 Msa0006640:CDS 55.0%
ACTCGAGAGACTGGAAGAGG+AGG + chr1_1:9636632-9636651 Msa0006640:CDS 55.0%
GACTGGAAGAGGAGGCTTCA+AGG + chr1_1:9636640-9636659 Msa0006640:CDS 55.0%
AGGGTTGTTGGAACAGCAGC+TGG + chr1_1:9636794-9636813 Msa0006640:CDS 55.0%
GGAGCAGGCTGTCCAAGAAA+TGG + chr1_1:9637013-9637032 Msa0006640:CDS 55.0%
TTTCGGCCTCGAAAGCCTTC+AGG - chr1_1:9637364-9637383 None:intergenic 55.0%
CTAGTAGGGTCCTCCGAAAG+TGG - chr1_1:9637497-9637516 None:intergenic 55.0%
ATCAGCTTCAACGCTCGGCA+TGG - chr1_1:9637894-9637913 None:intergenic 55.0%
AGCAGGAGTTGCTCGACTCT+CGG + chr1_1:9638003-9638022 Msa0006640:CDS 55.0%
!! GAGCAGCTTGTGATGGATGC+AGG + chr1_1:9638034-9638053 Msa0006640:CDS 55.0%
TAAAGGACGCCACGTCACAG+AGG + chr1_1:9638085-9638104 Msa0006640:three_prime_UTR 55.0%
! GAAGGAGGCGACGGCTAGTT+TGG + chr1_1:9636236-9636255 Msa0006640:CDS 60.0%
TACGTCTATCCGTGGCTGCG+AGG + chr1_1:9636529-9636548 Msa0006640:CDS 60.0%
ACGTCTATCCGTGGCTGCGA+GGG + chr1_1:9636530-9636549 Msa0006640:CDS 60.0%
GTGGCTGCGAGGGATGTTGA+AGG + chr1_1:9636540-9636559 Msa0006640:CDS 60.0%
GGAGGCTTCAAGGCATGCAC+AGG + chr1_1:9636650-9636669 Msa0006640:CDS 60.0%
GGCTTTCGAGGCCGAAACTG+TGG + chr1_1:9637367-9637386 Msa0006640:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 9634583 9638433 9634583 ID=Msa0006640;Name=Msa0006640
chr1_1 mRNA 9634583 9638433 9634583 ID=Msa0006640-mRNA-1;Parent=Msa0006640;Name=Msa0006640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=294|1|1|1|1|1|2|358|771
chr1_1 exon 9634583 9634930 9634583 ID=Msa0006640-mRNA-1:exon:3426;Parent=Msa0006640-mRNA-1
chr1_1 exon 9635814 9638433 9635814 ID=Msa0006640-mRNA-1:exon:3427;Parent=Msa0006640-mRNA-1
chr1_1 five_prime_UTR 9634583 9634876 9634583 ID=Msa0006640-mRNA-1:five_prime_utr;Parent=Msa0006640-mRNA-1
chr1_1 CDS 9634877 9634930 9634877 ID=Msa0006640-mRNA-1:cds;Parent=Msa0006640-mRNA-1
chr1_1 CDS 9635814 9638075 9635814 ID=Msa0006640-mRNA-1:cds;Parent=Msa0006640-mRNA-1
chr1_1 three_prime_UTR 9638076 9638433 9638076 ID=Msa0006640-mRNA-1:three_prime_utr;Parent=Msa0006640-mRNA-1
Gene Sequence

>Msa0006640

ATGACTTTCTCTGCATCTTCTCTTCGTCCTACCTCTTCTCCTTCCTACTCTCAGTTGTTGTGCTCTCTTAGGTACAATAGGAAGCTTCGTAGCCAAATCAATTTTGTTGTGACTCAAGGAAGAAAAGGTCGTTGGTTAAGGAATGGTGTTAGTGTTAAATCAGTGTTGAATGACAATAGACCTAGTTTTAACAATTATGGAGCGCCAGAATCTGCTAGGCTTCTCGAGAGATTGTTTGAGCAGACACAGAAGTTGGACAACCGGATGATAGGAGAGGAACCAGATCTTCGTGATTTTGAGTCGGATCTTTTGTCTGCGCTCATGGAATTGAAGGAGAAGGAGGATCATTTACAGGAAGTGGAGAGAACTGTTTTGTTGGAGAATGGAAAGCTGAAGGATGCGAAAGAGGAATTAGAGCGCCAAGAGAGTGAAATTAAAGCTGCTCGCGAGAAGTATGAGAGGCTTGAAGATGAGATGAAGGAGGCGACGGCTAGTTTGGTTTCTCAAGCTGGACAGATAGAGGAAATGAAGCTCCGGCTTAGGGATCGTGATAGTGAGATTGATGGTTTACGGAATGCGCTGTCTTTGAAGGAAGAAGAGATGGAGAAAATGAAGATTGGTTTGGCTAAGAAGAGTGAAGAAGCTGCTTATGTTGATTCTGAGCTTAGACAAAAGGTTCAGCTTCTGAGTGAAGCAAATGAGATCGTGAAGAAACAAGAAATTGAGCTTCTAGAATTACGGAGTGTTGTACGACAAAGAGAAGAAGAACTACGTCTATCCGTGGCTGCGAGGGATGTTGAAGGAGAAAAACTCAAGGTTGCAGAGGCCTCTTTGGAAAAGCACACGATGGAGTGGTTGTTAACACAAGAGGAACTCGAGAGACTGGAAGAGGAGGCTTCAAGGCATGCACAGGAGAGTAGTGAAACGCTAGAGAATTTCAGAAGGGTGAAGAAGCTTCTCAGTGATGTCAGGTCTGAATTAGTTTCGTCTCAGCAATCGCTTGCATCTTCTAGGTACAAAATGCAAGTACAAGAAGGGTTGTTGGAACAGCAGCTGGCTGAACTTGCAGACCAAAGGGAAAGTGTCATGTTGTACATGGAAAATTTGAAAGATGCCCAAATAGAAGTGGAGAACGAAAGAACAAAACTTAGGGTCGCAGAAGCTTTGAATAAAGAACTCGAACAGGATTTGTCCGTAGAGAAGGAGCTTATGAAGAAGTTACAGGAGGAGCTGAAGAAAGAAAGAGCTTCTTTGGAGCAGGCTGTCCAAGAAATGGCTTCGCTTCAAGAGGAATTAGATATAAAAAGTGCTGAATTTAAGGAAAAAAGTGCCCTTCTTGATGTCAAAGAGTCAGAGCTTGTTGATGCTAAGCTACAAATCCAGGAATTGAAAACTGAAAAGGCTTCTCTTCAGTCTCTCTTGGAGGAGAAAGACTTGGAACTTTCAAGTGCTAGGAAGATGCTGGTGGAACTAAACCAGGAAATCTCTGATCTTAAGATGCTTATGAATGATAAAGAAACACAGCTTATTGAAGCAACCAATATGTTAAGGGAGAAAGATGACCATGTGAAGGTAATCCAAAATAAGTTGAATAATACAAGCCTGAAGGCTTTCGAGGCCGAAACTGTGGTTGAACGAGTTTTAGATCTCACAAACAAACTTGTTGCTTCCATTAAGAATGAAGACATCAATTCATCAATACCACTAAATGAATTGGGTGATCAATTAATGATGCCACTTTCGGAGGACCCTACTAGTGAATTGAGTTGGCAACAAAAACGGCTGGAGAATGTGCTTGAGTTGACCAAGGAAAACTTGAAAACAAAGGAGATGGAAGTTCTTGCTGCACAGAGAGCTCTAACAATAAAAGATGAGGAGCTTAAAATGACTCTTGCAAGATTGGATGCAAAAGAGGAAGAGTTGAGAAAAGCAAAGGACATGGCTACAGAAGATGCTAATGATCATAAAACGGTGTATGCTATGACGCAGGAGAGAATCGGCGAGAAAACTATGGATGACTTGGCAATTGAGAAGCTTCAGCTTGAGGCAGCTCAGCTTGAAGATGAAGTTGAAGCTGCAACTAGCACTCTACAGAAACTTGCAGAAATGAGTCAACAACTTTTGAACAAGGCCATGCCGAGCGTTGAAGCTGATAGCTATATCAGTCTCATGCAAAACAACAATGATATTAACCTCAATTTAATCACAAATATCAATTGCATTGACTGTTTGGCTGTGGTAAAAGCAGGAGTTGCTCGACTCTCGGCATTGACAGAGCAGCTTGTGATGGATGCAGGTCTTGCTGCTGCAAGCTAA
Protein sequence

>Msa0006640

MTFSASSLRPTSSPSYSQLLCSLRYNRKLRSQINFVVTQGRKGRWLRNGVSVKSVLNDNRPSFNNYGAPESARLLERLFEQTQKLDNRMIGEEPDLRDFESDLLSALMELKEKEDHLQEVERTVLLENGKLKDAKEELERQESEIKAAREKYERLEDEMKEATASLVSQAGQIEEMKLRLRDRDSEIDGLRNALSLKEEEMEKMKIGLAKKSEEAAYVDSELRQKVQLLSEANEIVKKQEIELLELRSVVRQREEELRLSVAARDVEGEKLKVAEASLEKHTMEWLLTQEELERLEEEASRHAQESSETLENFRRVKKLLSDVRSELVSSQQSLASSRYKMQVQEGLLEQQLAELADQRESVMLYMENLKDAQIEVENERTKLRVAEALNKELEQDLSVEKELMKKLQEELKKERASLEQAVQEMASLQEELDIKSAEFKEKSALLDVKESELVDAKLQIQELKTEKASLQSLLEEKDLELSSARKMLVELNQEISDLKMLMNDKETQLIEATNMLREKDDHVKVIQNKLNNTSLKAFEAETVVERVLDLTNKLVASIKNEDINSSIPLNELGDQLMMPLSEDPTSELSWQQKRLENVLELTKENLKTKEMEVLAAQRALTIKDEELKMTLARLDAKEEELRKAKDMATEDANDHKTVYAMTQERIGEKTMDDLAIEKLQLEAAQLEDEVEAATSTLQKLAEMSQQLLNKAMPSVEADSYISLMQNNNDINLNLITNINCIDCLAVVKAGVARLSALTEQLVMDAGLAAAS*