AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0008080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0008080 MtrunA17_Chr1g0147011 68.641 979 219 14 580 1486 500 1462 0.0 1292
Msa0008080 MtrunA17_Chr1g0147011 71.845 515 113 6 1 491 1 507 0.0 745
Msa0008080 MtrunA17_Chr1g0146991 88.047 594 31 3 932 1486 1 593 0.0 1036
Msa0008080 MtrunA17_Chr1g0146971 95.775 142 5 1 580 721 5 145 8.27e-88 282
Msa0008080 MtrunA17_Chr1g0146981 89.583 144 15 0 789 932 2 145 2.13e-83 269
Msa0008080 MtrunA17_Chr1g0146951 85.714 147 18 2 164 310 8 151 1.56e-77 253
Msa0008080 MtrunA17_Chr1g0146961 94.309 123 7 0 320 442 1 123 1.83e-75 246
Msa0008080 MtrunA17_Chr1g0146941 62.963 216 25 3 1 163 1 214 5.43e-73 243
Msa0008080 MtrunA17_Chr7g0275811 44.980 249 132 5 1172 1416 92 339 9.54e-62 216
Msa0008080 MtrunA17_Chr3g0126881 36.257 342 184 8 1161 1477 96 428 1.34e-56 203
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0008080 AT5G24280.2 50.526 475 204 5 34 485 21 487 3.05e-135 456
Msa0008080 AT5G24280.2 36.388 371 232 3 769 1136 815 1184 5.91e-66 247
Msa0008080 AT5G24280.2 37.500 344 186 8 489 814 401 733 2.94e-54 209
Msa0008080 AT5G24280.2 37.543 293 163 7 1171 1457 1280 1558 2.51e-44 177
Msa0008080 AT5G24280.3 50.526 475 204 5 34 485 21 487 3.05e-135 456
Msa0008080 AT5G24280.3 36.388 371 232 3 769 1136 815 1184 5.91e-66 247
Msa0008080 AT5G24280.3 37.500 344 186 8 489 814 401 733 2.94e-54 209
Msa0008080 AT5G24280.3 37.543 293 163 7 1171 1457 1280 1558 2.51e-44 177
Msa0008080 AT5G24280.1 47.337 507 204 7 34 485 21 519 1.16e-127 435
Msa0008080 AT5G24280.1 36.388 371 232 3 769 1136 847 1216 9.84e-66 246
Msa0008080 AT5G24280.1 38.509 322 179 7 489 802 433 743 4.92e-54 209
Msa0008080 AT5G24280.1 36.860 293 165 6 1171 1457 1312 1590 2.58e-44 177
Msa0008080 AT5G24275.2 35.182 523 272 13 885 1359 99 602 2.31e-79 275
Msa0008080 AT5G24275.1 35.182 523 272 13 885 1359 304 807 9.94e-78 276
Msa0008080 AT5G24275.3 34.685 444 223 13 964 1359 6 430 4.01e-64 225
Msa0008080 AT5G24275.4 34.685 444 223 13 964 1359 6 430 4.01e-64 225
Msa0008080 AT3G49250.1 43.111 225 123 3 1174 1394 116 339 1.11e-50 186

Find 300 sgRNAs with CRISPR-Local

Find 1297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACTCCTGCCTGAATTT+TGG 0.154170 1_1:-11688308 None:intergenic
CAAAAGGTCCCCTCAATTTC+TGG 0.157458 1_1:-11688675 None:intergenic
GGAGAGTATTGAGAGAATTT+TGG 0.170944 1_1:+11676224 Msa0008080:CDS
CACTTCTTGGAAGATATAAT+TGG 0.178304 1_1:+11689944 Msa0008080:CDS
TTGAAACTTATTATTATTCT+TGG 0.186520 1_1:-11669663 None:intergenic
CAAACTTCTCAAGGACTTCT+TGG 0.210710 1_1:+11678712 Msa0008080:CDS
GAGAACGCCAGAAGGCTTTA+TGG 0.220992 1_1:+11690810 Msa0008080:CDS
AAGGCGTGCATTTGCTTCTT+TGG 0.232090 1_1:-11676075 None:intergenic
ATATCAACATCTTTCACTTT+TGG 0.247085 1_1:-11674467 None:intergenic
TATCACACCAATTGAATTTC+AGG 0.251304 1_1:+11674764 Msa0008080:CDS
GAACTCTTTCTCTTGGCTTT+GGG 0.273909 1_1:+11691034 Msa0008080:CDS
TTCTTCAAAGCAATGGTAAA+AGG 0.274323 1_1:-11683210 None:intergenic
TCGGTGTCGATCACGCTTAT+AGG 0.275828 1_1:-11684681 None:intergenic
CGTGGAGGTTAATATTCTTT+TGG 0.285939 1_1:+11687690 Msa0008080:CDS
CAGAGGTGTGGGTGCTGGTT+TGG 0.287410 1_1:+11678677 Msa0008080:CDS
GTGTTAAGGGGAGCATGTTC+AGG 0.289144 1_1:+11683896 Msa0008080:CDS
TTGTTCCTTAAGTCCATAAA+AGG 0.295537 1_1:-11677290 None:intergenic
GGAACTCTTTCTCTTGGCTT+TGG 0.301870 1_1:+11691033 Msa0008080:CDS
GGGTGTTATTTGTAGATCTT+TGG 0.303791 1_1:+11690410 Msa0008080:CDS
GAAGTAGGTATTTGAAAATT+CGG 0.304209 1_1:+11669778 Msa0008080:CDS
CAGAGACCCGACTAAAGTTT+TGG 0.305660 1_1:-11676287 None:intergenic
ATCCTTGATCTTGTTATCAT+TGG 0.310672 1_1:-11669871 None:intergenic
TTCAACATTTGCGTAGCTTC+TGG 0.316994 1_1:-11691696 None:intergenic
TGTGATGTGCAGCCTTGTTT+TGG 0.318443 1_1:+11673194 Msa0008080:intron
GGCGGCATTATAAGAGAAAA+TGG 0.319270 1_1:+11691012 Msa0008080:CDS
AGTTGGTCTTCTCTTATATT+AGG 0.324131 1_1:-11686560 None:intergenic
CTAAAGTTAACAGCAGGTTT+TGG 0.328837 1_1:+11687964 Msa0008080:CDS
TCATATGCTTACAATTAAAT+CGG 0.329243 1_1:+11688578 Msa0008080:CDS
TGAATCTGCAGAACAAATTC+AGG 0.340312 1_1:-11675851 None:intergenic
TTCTCCTCTGGGATATCTAT+TGG 0.340662 1_1:-11684591 None:intergenic
ACTCATCACAGGAAAATAAT+AGG 0.343346 1_1:-11678603 None:intergenic
ATGAGAATTCCATCGTAAAA+TGG 0.343507 1_1:+11672045 Msa0008080:CDS
TTACTACTGAAGATTGAAAA+AGG 0.344652 1_1:+11691741 Msa0008080:CDS
GAATAAAGTCGTGTATGAAT+TGG 0.345623 1_1:+11678847 Msa0008080:CDS
GCTTCAAAATTATAATCTTC+AGG 0.349233 1_1:-11671257 None:intergenic
ACCTATAGCATCTATGCATC+TGG 0.349975 1_1:+11673235 Msa0008080:CDS
CCGATCCAAAGTTATCAAAT+AGG 0.350635 1_1:+11690788 Msa0008080:CDS
GTCTCCTTCCAGATGCTCGC+TGG 0.354409 1_1:+11676325 Msa0008080:CDS
AAGTAGGTATTTGAAAATTC+GGG 0.355660 1_1:+11669779 Msa0008080:CDS
CATATACTTCCCCTACATTC+AGG 0.357811 1_1:+11674517 Msa0008080:CDS
AAGTTTACCCAGCGAGCATC+TGG 0.361921 1_1:-11676333 None:intergenic
TACCATTGCTTTGAAGAACT+TGG 0.366945 1_1:+11683215 Msa0008080:CDS
AAGCAATGGTAAAAGGATTC+TGG 0.367642 1_1:-11683203 None:intergenic
AAAGCAACAGAATCACTTCT+TGG 0.370458 1_1:+11689931 Msa0008080:CDS
ACAGCATACCCTTGTTTGTT+GGG 0.372373 1_1:+11678754 Msa0008080:CDS
AAGAGAAGACCAACTACTTC+CGG 0.372390 1_1:+11686568 Msa0008080:CDS
GGTGGATTGACAACTATAAC+TGG 0.373256 1_1:-11683489 None:intergenic
ACTTCTTGGAAGATATAATT+GGG 0.379257 1_1:+11689945 Msa0008080:CDS
AGAACGCCAGAAGGCTTTAT+GGG 0.383529 1_1:+11690811 Msa0008080:CDS
GATCTACAGGTAGATGATAA+AGG 0.383791 1_1:+11687919 Msa0008080:intron
GTTCTTAAGAGAAAATCTAT+TGG 0.383855 1_1:+11678815 Msa0008080:CDS
GAAAATGGAACTCTTTCTCT+TGG 0.387527 1_1:+11691027 Msa0008080:CDS
ATGCCAAGTGCTTCCTTGTT+CGG 0.389709 1_1:-11683510 None:intergenic
GCATTTCTAATATCCATTCA+TGG 0.392415 1_1:-11683425 None:intergenic
TGCTAGACTTAGGAGATTGA+TGG 0.394563 1_1:+11691904 Msa0008080:CDS
TGCAAGCTGTGTGGTTCAAC+GGG 0.395114 1_1:+11671399 Msa0008080:CDS
TAAGAGTTGATAGTTCCTTC+AGG 0.395269 1_1:-11688889 None:intergenic
AAGAGAAAATCTATTGGAAA+TGG 0.397973 1_1:+11678821 Msa0008080:CDS
AGCATAGGTGTCCCAATCTC+TGG 0.399969 1_1:-11691885 None:intergenic
ACCTTCGAACATAACAGATA+TGG 0.401978 1_1:-11688282 None:intergenic
GCTGTAGGGGACAGAGGTGT+GGG 0.402890 1_1:+11678666 Msa0008080:CDS
TTTAGACATATGGTGGCATA+AGG 0.403939 1_1:+11673568 Msa0008080:intron
ATTTCTGGAACACGAATAGA+TGG 0.403991 1_1:-11688660 None:intergenic
TCCATTAGCAGATCTGTATC+TGG 0.404108 1_1:-11671230 None:intergenic
TAATTGTAAGCATATGAAAC+TGG 0.404903 1_1:-11688572 None:intergenic
GGGGACAGAGGTGTGGGTGC+TGG 0.407562 1_1:+11678672 Msa0008080:CDS
TAAAGAAAGTCTACGAGTTA+TGG 0.409530 1_1:+11673400 Msa0008080:CDS
TCGAAGGTAAACCAAAATTC+AGG 0.410501 1_1:+11688297 Msa0008080:CDS
ATGCTGTTTGGGGAATTTCT+TGG 0.411015 1_1:+11669747 Msa0008080:CDS
TGAAGAGAAAGGAGAAGTCT+TGG 0.412538 1_1:+11683852 Msa0008080:CDS
CAATCAAAATCACAGGCTAT+TGG 0.413334 1_1:+11672838 Msa0008080:CDS
AGAAGAAAAGTGAAATCAAT+TGG 0.413728 1_1:+11669820 Msa0008080:CDS
TTCAGAATCCTGAGCTTAGC+AGG 0.415233 1_1:+11689990 Msa0008080:CDS
GCATAACCCATAAAGCCTTC+TGG 0.415293 1_1:-11690817 None:intergenic
ACCATTGCAAGAATGCAAAT+TGG 0.416101 1_1:-11675828 None:intergenic
TGACGTGACTGTTGAACTTC+AGG 0.416376 1_1:+11686140 Msa0008080:CDS
ACTTTAGTCGGGTCTCTGTT+AGG 0.417322 1_1:+11676292 Msa0008080:CDS
ATTGGGGTCGTTGCCCTCCT+TGG 0.419077 1_1:+11689962 Msa0008080:CDS
CTATTTGATAACTTTGGATC+GGG 0.419959 1_1:-11690787 None:intergenic
TCTCTTGTGCAGGGGAAAGA+TGG 0.422651 1_1:+11672798 Msa0008080:intron
AGAGCGCACCCATTCTCCTC+TGG 0.422918 1_1:-11684603 None:intergenic
AAAGATAACAGGAAGCTAAT+CGG 0.422964 1_1:+11671422 Msa0008080:CDS
TGTAGTCATTTCTTCTTTGG+TGG 0.431659 1_1:-11689849 None:intergenic
CGGGTCTCTGTTAGGCGGCT+TGG 0.432882 1_1:+11676300 Msa0008080:CDS
TTGGAACAAAATCCAGAGAT+TGG 0.433347 1_1:+11691873 Msa0008080:CDS
AATGATTACAAGTAGTGAAT+TGG 0.434890 1_1:+11686325 Msa0008080:CDS
GCTGCTGAAGCAGCTAATCT+TGG 0.436687 1_1:+11690498 Msa0008080:CDS
AATGGTGCTGTATCATTAGA+TGG 0.437239 1_1:+11690991 Msa0008080:CDS
AATATCTTTACCATCGTTGT+TGG 0.437531 1_1:-11669628 None:intergenic
AATAAAGTCGTGTATGAATT+GGG 0.437950 1_1:+11678848 Msa0008080:CDS
TTTCAAGGAGTTAGCGTTTG+AGG 0.438649 1_1:+11686598 Msa0008080:CDS
TGTTCCAATGCCTCAGCAAA+AGG 0.439517 1_1:-11691858 None:intergenic
GGAACGCCACACTGCTTCCT+TGG 0.441669 1_1:-11678789 None:intergenic
AATCAAAGTAGTTCTATAGC+TGG 0.442718 1_1:-11686360 None:intergenic
TGAAGTCATTAGAGTTCATC+GGG 0.443438 1_1:+11683826 Msa0008080:intron
ACAAGGACAGCATCGGGCCA+TGG 0.446135 1_1:+11690877 Msa0008080:CDS
AGTTCCACAATTGCTGCATT+CGG 0.447523 1_1:-11669696 None:intergenic
CATATGCTTACAATTAAATC+GGG 0.450609 1_1:+11688579 Msa0008080:CDS
GTTCTCCTATTTGATAACTT+TGG 0.452254 1_1:-11690793 None:intergenic
AAGGGAAATATACAAATCTA+AGG 0.453325 1_1:-11676094 None:intergenic
GGCTGTAGGGGACAGAGGTG+TGG 0.454621 1_1:+11678665 Msa0008080:CDS
AAACATGGAGCTTCTTGAAA+AGG 0.455518 1_1:-11690924 None:intergenic
TTTCTTTACATGCTTTGTCT+TGG 0.458108 1_1:-11673385 None:intergenic
AGAGAAGACCAACTACTTCC+GGG 0.458345 1_1:+11686569 Msa0008080:CDS
ACCAGATACAGATCTGCTAA+TGG 0.458817 1_1:+11671229 Msa0008080:CDS
AAAACTTCCAAAACTTTAGT+CGG 0.462317 1_1:+11676280 Msa0008080:CDS
GAAAGGACCTGAAATTCAAT+TGG 0.467102 1_1:-11674771 None:intergenic
AAGATAACAGGAAGCTAATC+GGG 0.468165 1_1:+11671423 Msa0008080:CDS
TTGTGCCACTGGTGGTCAGC+TGG 0.468884 1_1:+11688476 Msa0008080:CDS
AGTCATTTCTTCTTTGGTGG+TGG 0.469132 1_1:-11689846 None:intergenic
TAGAACAAGAATACCATGAA+TGG 0.469842 1_1:+11683412 Msa0008080:CDS
TCAGAGTGAGTGTGGCTGTA+GGG 0.471764 1_1:+11678652 Msa0008080:CDS
AAGATTAATGACTTTGAACT+TGG 0.477421 1_1:+11689262 Msa0008080:intron
CTGTCCTTGTCTCTAGGTGA+TGG 0.479142 1_1:-11690864 None:intergenic
TATTCGTGTTCCAGAAATTG+AGG 0.479757 1_1:+11688665 Msa0008080:CDS
ACCATTGCTTTGAAGAACTT+GGG 0.479885 1_1:+11683216 Msa0008080:CDS
ATACCTTGCCATCGCTATTG+AGG 0.480638 1_1:-11688940 None:intergenic
TTTGTGTTACCTTTGTGAAA+GGG 0.482256 1_1:-11676112 None:intergenic
CTCTTGTGCAGGGGAAAGAT+GGG 0.482309 1_1:+11672799 Msa0008080:intron
GCACTTGGCATTTCTGAAGA+TGG 0.483183 1_1:+11683522 Msa0008080:CDS
AAACTTCCAAAACTTTAGTC+GGG 0.483453 1_1:+11676281 Msa0008080:CDS
AGTTCAACAGTCACGTCATC+CGG 0.483607 1_1:-11686135 None:intergenic
ACCAATTTGCATTCTTGCAA+TGG 0.483869 1_1:+11675827 Msa0008080:CDS
CAAAGAGCTACTGATATTCA+AGG 0.484754 1_1:-11684652 None:intergenic
ATTTGTGTTACCTTTGTGAA+AGG 0.484862 1_1:-11676113 None:intergenic
AGGAAAACCGCCATACCTAA+TGG 0.485524 1_1:+11672861 Msa0008080:CDS
CATGTTCAAACCTGAATGTA+GGG 0.485599 1_1:-11674527 None:intergenic
GGTTCAACGGGAAAGATAAC+AGG 0.486102 1_1:+11671411 Msa0008080:CDS
TAGATATCCCAGAGGAGAAT+GGG 0.487516 1_1:+11684595 Msa0008080:CDS
CAAGGACAGCATCGGGCCAT+GGG 0.488337 1_1:+11690878 Msa0008080:CDS
ATGAGAAGCTTCAAAGCAAA+AGG 0.489261 1_1:-11688691 None:intergenic
TTTGAAATTGTCAATGCTGA+TGG 0.489566 1_1:+11688510 Msa0008080:CDS
CCTATTTGATAACTTTGGAT+CGG 0.489733 1_1:-11690788 None:intergenic
TCATTTGACAGGCCATATGA+TGG 0.491198 1_1:+11690727 Msa0008080:intron
GTGAAGTCATTAGAGTTCAT+CGG 0.496698 1_1:+11683825 Msa0008080:intron
GCATGTTCAAACCTGAATGT+AGG 0.498424 1_1:-11674528 None:intergenic
AACAGCATACCCTTGTTTGT+TGG 0.498855 1_1:+11678753 Msa0008080:CDS
CCGATGCTGTCCTTGTCTCT+AGG 0.498998 1_1:-11690870 None:intergenic
TGACTGTGTAGGCTTAAAAC+CGG 0.501219 1_1:-11677472 None:intergenic
TGGAACAAAATCCAGAGATT+GGG 0.504538 1_1:+11691874 Msa0008080:CDS
CCAAGTGCTTCCTTGTTCGG+TGG 0.505892 1_1:-11683507 None:intergenic
AAGCGTGATCGACACCGAAA+AGG 0.506735 1_1:+11684686 Msa0008080:CDS
ATTGAAGAGATGTTCGTTGA+GGG 0.507434 1_1:+11677340 Msa0008080:CDS
TGTTAAGGGGAGCATGTTCA+GGG 0.508251 1_1:+11683897 Msa0008080:CDS
ATGATGACTTGTCTGACAAA+GGG 0.510141 1_1:+11674736 Msa0008080:CDS
TCTCCTTCCAGATGCTCGCT+GGG 0.511240 1_1:+11676326 Msa0008080:CDS
AAGAGTTGATAGTTCCTTCA+GGG 0.511517 1_1:-11688888 None:intergenic
AAGGAGAAGTCTTGGAGTCA+TGG 0.515142 1_1:+11683860 Msa0008080:CDS
ATGAAGAATACCATTAGGTA+TGG 0.515328 1_1:-11672871 None:intergenic
AGAATGTTAGCGGAATATCT+TGG 0.519099 1_1:+11690372 Msa0008080:intron
TTGTGCAACATCTTTCGCAT+TGG 0.520629 1_1:-11688837 None:intergenic
CAAAACAAGCAAGAGTATGA+TGG 0.521624 1_1:+11690948 Msa0008080:CDS
GACTTGTATTTCAAAGTGCA+TGG 0.525063 1_1:+11686171 Msa0008080:CDS
TTCTTGGTTTAGTTCGAAGT+AGG 0.525498 1_1:+11669763 Msa0008080:CDS
CCTATAGCATCTATGCATCT+GGG 0.526127 1_1:+11673236 Msa0008080:CDS
GCCACACTCACTCTGAATGA+TGG 0.526738 1_1:-11678645 None:intergenic
TGCCAATGATAACAAGATCA+AGG 0.527667 1_1:+11669869 Msa0008080:CDS
TGAAACGTATTCATTGTGCT+TGG 0.527904 1_1:+11685835 Msa0008080:CDS
ATATGTCCTTGAGGTGGCAC+AGG 0.530973 1_1:-11674499 None:intergenic
TTGGAAACTTTGAAGGATGA+CGG 0.533448 1_1:+11676243 Msa0008080:CDS
AATGTCAAGAGCTTGATGTC+AGG 0.535452 1_1:+11685883 Msa0008080:CDS
ATCAAAGTAGTTCTATAGCT+GGG 0.536927 1_1:-11686359 None:intergenic
ATAGATATCCCAGAGGAGAA+TGG 0.537558 1_1:+11684594 Msa0008080:CDS
GTCATAACATGCAATGGCTA+AGG 0.538290 1_1:-11686079 None:intergenic
TAAATTGCAGAAACTGATGC+CGG 0.538660 1_1:+11677453 Msa0008080:intron
GGGACACCTATGCTAGACTT+AGG 0.539982 1_1:+11691894 Msa0008080:CDS
AAATGAAACCCGGAAGTAGT+TGG 0.542686 1_1:-11686577 None:intergenic
CCCAGATGCATAGATGCTAT+AGG 0.542808 1_1:-11673236 None:intergenic
GAGCGCACCCATTCTCCTCT+GGG 0.543360 1_1:-11684602 None:intergenic
ATTCGTGTTCCAGAAATTGA+GGG 0.543848 1_1:+11688666 Msa0008080:CDS
TCGATTCATCTGCATTAGAA+AGG 0.544560 1_1:-11688602 None:intergenic
CACGGAAAAGATACTGAAAA+CGG 0.545180 1_1:-11686401 None:intergenic
TCCATATCTGTTATGTTCGA+AGG 0.546516 1_1:+11688281 Msa0008080:CDS
TTGCAAGCTGTGTGGTTCAA+CGG 0.546993 1_1:+11671398 Msa0008080:CDS
GAGAAGCTCGGATCATATGC+AGG 0.547744 1_1:+11684473 Msa0008080:CDS
AGCTACTGATATTCAAGGTG+GGG 0.548390 1_1:-11684647 None:intergenic
CTAGAGACAAGGACAGCATC+GGG 0.549880 1_1:+11690871 Msa0008080:CDS
TCTTGGTGAAGATCAAATGC+TGG 0.550642 1_1:+11690389 Msa0008080:CDS
ATCTAACAGAGATTCGAGGC+GGG 0.554522 1_1:+11675792 Msa0008080:CDS
TCAAAATCACAGGCTATTGG+AGG 0.555306 1_1:+11672841 Msa0008080:CDS
TAAACGGAGCTCGATTGTCA+TGG 0.556220 1_1:-11686104 None:intergenic
TAGCCATGTCAAACTTCTCA+AGG 0.556451 1_1:+11678703 Msa0008080:CDS
CATTTGACAGGCCATATGAT+GGG 0.556751 1_1:+11690728 Msa0008080:intron
GCCCAAGTTCTTCAAAGCAA+TGG 0.557865 1_1:-11683217 None:intergenic
TAACATGCAATGGCTAAGGA+TGG 0.558634 1_1:-11686075 None:intergenic
TTTGGAATGTTTGGATATGG+GGG 0.559632 1_1:+11673212 Msa0008080:CDS
GAGCTACTGATATTCAAGGT+GGG 0.560334 1_1:-11684648 None:intergenic
TTACAGGGTTGAAGAATGGA+AGG 0.562154 1_1:+11669555 None:intergenic
TGTCTGAAATGCAGAATATG+TGG 0.564803 1_1:+11671198 Msa0008080:intron
TGAACTCATCCCAACAAACA+AGG 0.565598 1_1:-11678763 None:intergenic
CCTCCACGCCTTCAGACACA+TGG 0.567717 1_1:-11687675 None:intergenic
CCTAGAGACAAGGACAGCAT+CGG 0.567982 1_1:+11690870 Msa0008080:CDS
TGTCCTTGTCTCTAGGTGAT+GGG 0.568195 1_1:-11690863 None:intergenic
TATTCTTGTTCTATTTGTGA+AGG 0.568352 1_1:-11683402 None:intergenic
AAACCATGTGTCTGAAGGCG+TGG 0.569571 1_1:+11687672 Msa0008080:CDS
ACAGGGTTGAAGAATGGAAG+GGG 0.570063 1_1:+11669557 None:intergenic
CCACCGAACAAGGAAGCACT+TGG 0.570708 1_1:+11683507 Msa0008080:CDS
TTAGACATATGGTGGCATAA+GGG 0.570950 1_1:+11673569 Msa0008080:intron
GTAGTGAATTGGACAAGATA+AGG 0.573215 1_1:+11686336 Msa0008080:CDS
TGCAATGGCTAAGGATGGAA+AGG 0.573670 1_1:-11686070 None:intergenic
CTTGAAAAGGCTAAATAGAA+CGG 0.573892 1_1:-11690911 None:intergenic
GAAACTCCTGTGCCACCTCA+AGG 0.574394 1_1:+11674493 Msa0008080:CDS
GTTACCGAATGCAGCAATTG+TGG 0.577087 1_1:+11669692 Msa0008080:CDS
CAGAGTGAGTGTGGCTGTAG+GGG 0.578382 1_1:+11678653 Msa0008080:CDS
AGTTGTCAATCCACCGAACA+AGG 0.578580 1_1:+11683497 Msa0008080:CDS
ATCTCTGTCCTCAATAGCGA+TGG 0.578829 1_1:+11688932 Msa0008080:CDS
TACAGGGTTGAAGAATGGAA+GGG 0.578867 1_1:+11669556 None:intergenic
TTCTAGAGGCAGCTTTACAA+AGG 0.579948 1_1:+11673617 Msa0008080:CDS
TCATCGGGTTCTGAAGAGAA+AGG 0.580117 1_1:+11683841 Msa0008080:CDS
TTGACAAACCTGCTAAGCTC+AGG 0.581495 1_1:-11689998 None:intergenic
AGTCTAACCTTTGACTGTGT+AGG 0.581861 1_1:-11677483 None:intergenic
CCACAGATTCCACTCATCAC+AGG 0.584929 1_1:-11678614 None:intergenic
AATGATGACTTGTCTGACAA+AGG 0.585022 1_1:+11674735 Msa0008080:CDS
AACATTTGCGTAGCTTCTGG+AGG 0.585146 1_1:-11691693 None:intergenic
GGTCAACTAAAGTTAACAGC+AGG 0.589570 1_1:+11687958 Msa0008080:CDS
TCCTTAAGTCCATAAAAGGA+AGG 0.592109 1_1:-11677286 None:intergenic
GCTATTGAATGTATAGAGAA+TGG 0.595546 1_1:+11690973 Msa0008080:CDS
TTGAGGGTAAAATGCTATGT+CGG 0.598103 1_1:+11677356 Msa0008080:CDS
CCACAAGGAAAATATATGCA+AGG 0.599117 1_1:-11691654 None:intergenic
TCCATCATTCAGAGTGAGTG+TGG 0.600668 1_1:+11678644 Msa0008080:CDS
AGGTAAACCAAAATTCAGGC+AGG 0.600747 1_1:+11688301 Msa0008080:CDS
TAATTGCAGTACTGTATACA+AGG 0.601251 1_1:+11687732 Msa0008080:CDS
TGACATCAAGCTCTTGACAT+TGG 0.603498 1_1:-11685881 None:intergenic
CTAATGCAGATGAATCGATA+CGG 0.604094 1_1:+11688607 Msa0008080:CDS
CTTTGTCTTGGAAGAAACAC+GGG 0.604780 1_1:-11673373 None:intergenic
TAACTCTGAATCCACATGGA+AGG 0.605270 1_1:+11673455 Msa0008080:CDS
CAATCTCCTAAGTCTAGCAT+AGG 0.607643 1_1:-11691900 None:intergenic
TATAGAAACCATGTGTCTGA+AGG 0.607775 1_1:+11687667 Msa0008080:CDS
TTCAGAGTGAGTGTGGCTGT+AGG 0.607805 1_1:+11678651 Msa0008080:CDS
ATTCTCGACTTCACCATCGT+GGG 0.607817 1_1:-11673595 None:intergenic
TATTGAAGAGATGTTCGTTG+AGG 0.608262 1_1:+11677339 Msa0008080:CDS
AAAATTTCAGATAAACAGAC+CGG 0.608599 1_1:+11683243 Msa0008080:CDS
TCACCGACAATCAAAATCAC+AGG 0.609685 1_1:+11672831 Msa0008080:CDS
TTAGCATATTCGAGATAACC+AGG 0.610969 1_1:-11686530 None:intergenic
ATTGCAAGAATGCAAATTGG+TGG 0.616105 1_1:-11675825 None:intergenic
TATGATGACGAAGCTGATGC+CGG 0.618739 1_1:+11683456 Msa0008080:CDS
TGTATATTTCCCTTTCACAA+AGG 0.618764 1_1:+11676103 Msa0008080:CDS
GCTTTGTCTTGGAAGAAACA+CGG 0.619899 1_1:-11673374 None:intergenic
TGTCCTCAATAGCGATGGCA+AGG 0.619932 1_1:+11688937 Msa0008080:CDS
TGTTGCACAACATCTATCCC+CGG 0.620409 1_1:+11688850 Msa0008080:CDS
TCTAACAGAGATTCGAGGCG+GGG 0.621606 1_1:+11675793 Msa0008080:CDS
TTAGTCGGGTCTCTGTTAGG+CGG 0.621987 1_1:+11676295 Msa0008080:CDS
GTCTGAAATGCAGAATATGT+GGG 0.624627 1_1:+11671199 Msa0008080:intron
AATTCTCGACTTCACCATCG+TGG 0.625282 1_1:-11673596 None:intergenic
CAGGGTTGAAGAATGGAAGG+GGG 0.625340 1_1:+11669558 None:intergenic
GAACTCATCCCAACAAACAA+GGG 0.627227 1_1:-11678762 None:intergenic
ATTCTGAACAGAACCAAGGA+GGG 0.629386 1_1:-11689975 None:intergenic
AACTCCTTGAAAATGAAACC+CGG 0.629390 1_1:-11686587 None:intergenic
GAACGGTCTCACGAAGCCCA+TGG 0.630143 1_1:-11690894 None:intergenic
ATATCCATCTTGCTCCCACA+AGG 0.630443 1_1:-11691669 None:intergenic
AATCTTGCGAATCGCATCTG+AGG 0.630729 1_1:+11688343 Msa0008080:CDS
AAGAATACCATTAGGTATGG+CGG 0.633570 1_1:-11672868 None:intergenic
TCAAATAGGAGAACGCCAGA+AGG 0.635926 1_1:+11690802 Msa0008080:CDS
AACAGAGATTCGAGGCGGGG+AGG 0.637567 1_1:+11675796 Msa0008080:CDS
GTTAATCTAACAGAGATTCG+AGG 0.639390 1_1:+11675788 Msa0008080:CDS
TGTTTCCGTCAAAATTAGCA+CGG 0.639859 1_1:+11683362 Msa0008080:CDS
AGAGCTGTGTCTGACTGCAA+AGG 0.640595 1_1:+11688725 Msa0008080:CDS
CAATCAAAATCACCTCGACA+CGG 0.641182 1_1:-11686419 None:intergenic
AATCTAACTCTGAATCCACA+TGG 0.642736 1_1:+11673451 Msa0008080:CDS
ATGACTTGTCTGACAAAGGG+AGG 0.642821 1_1:+11674739 Msa0008080:CDS
TATAACTGGCTTATCCTCAC+CGG 0.643304 1_1:-11683475 None:intergenic
TTCGTGTTCCAGAAATTGAG+GGG 0.644094 1_1:+11688667 Msa0008080:CDS
CCATGTGTCTGAAGGCGTGG+AGG 0.644668 1_1:+11687675 Msa0008080:CDS
TTGGGATGAGTTCAATACCA+AGG 0.645910 1_1:+11678772 Msa0008080:CDS
ATGGATGTCATAACATGCAA+TGG 0.648753 1_1:-11686085 None:intergenic
TTACCCAGCGAGCATCTGGA+AGG 0.649833 1_1:-11676329 None:intergenic
AGAGTTGATAGTTCCTTCAG+GGG 0.649868 1_1:-11688887 None:intergenic
AGAGCTACTGATATTCAAGG+TGG 0.651618 1_1:-11684649 None:intergenic
CTTGGTGAAGATCAAATGCT+GGG 0.652340 1_1:+11690390 Msa0008080:CDS
GAGTTGATAGTTCCTTCAGG+GGG 0.653915 1_1:-11688886 None:intergenic
CCTGTGATGAGTGGAATCTG+TGG 0.654185 1_1:+11678614 Msa0008080:CDS
GGCATAAGGGCACCCCACGA+TGG 0.655046 1_1:+11673582 Msa0008080:CDS
CTTCTTGGAAGATATAATTG+GGG 0.656471 1_1:+11689946 Msa0008080:CDS
ATGTCTTATAATCAAGACCA+TGG 0.660228 1_1:+11675875 Msa0008080:CDS
AGTCCTTGAGAAGTTTGACA+TGG 0.660747 1_1:-11678706 None:intergenic
TGATGAGTGGAATCTGTGGT+AGG 0.663928 1_1:+11678618 Msa0008080:CDS
CTATAGCATCTATGCATCTG+GGG 0.665514 1_1:+11673237 Msa0008080:CDS
AGTGTGGCTGTAGGGGACAG+AGG 0.669134 1_1:+11678660 Msa0008080:CDS
TATCCAAACATTCCAAAACA+AGG 0.669617 1_1:-11673206 None:intergenic
GGTGAAGTCGAGAATTCTAG+AGG 0.671243 1_1:+11673603 Msa0008080:CDS
GGTGGTGGCAAACAACAAGT+CGG 0.673922 1_1:-11689831 None:intergenic
AGGGGAAGTATATGTCCTTG+AGG 0.674608 1_1:-11674508 None:intergenic
ATGATGACAACCAACAACGA+TGG 0.676162 1_1:+11669618 Msa0008080:CDS
GGAAGTATATGTCCTTGAGG+TGG 0.677279 1_1:-11674505 None:intergenic
TTCTCGACTTCACCATCGTG+GGG 0.677936 1_1:-11673594 None:intergenic
ATGTTCAAACCTGAATGTAG+GGG 0.679051 1_1:-11674526 None:intergenic
GATTCTGAACAGAACCAAGG+AGG 0.680382 1_1:-11689976 None:intergenic
AAACATGAATACCTTCCATG+TGG 0.683092 1_1:-11673466 None:intergenic
CAGGATTCTGAACAGAACCA+AGG 0.684171 1_1:-11689979 None:intergenic
ATTCCCATCACCTAGAGACA+AGG 0.688226 1_1:+11690860 Msa0008080:CDS
TAGCATCTATGCATCTGGGG+AGG 0.697776 1_1:+11673240 Msa0008080:CDS
ATTCAGGAATCTTACCACCC+AGG 0.699327 1_1:-11683982 None:intergenic
AATCTAACAGAGATTCGAGG+CGG 0.707947 1_1:+11675791 Msa0008080:CDS
TGACGAAGCTGATGCCGGTG+AGG 0.712253 1_1:+11683461 Msa0008080:CDS
GGGGAAAGTATTCTTATCCG+GGG 0.712971 1_1:-11688867 None:intergenic
CACGTGCAGAGAGACTACAT+AGG 0.722422 1_1:-11689907 None:intergenic
GGTGCTGTATCATTAGATGG+CGG 0.731976 1_1:+11690994 Msa0008080:CDS
ATAATGCTTTGCAAGCTGTG+TGG 0.734638 1_1:+11671390 Msa0008080:CDS
TCAATACCAAGGAAGCAGTG+TGG 0.741352 1_1:+11678783 Msa0008080:CDS
CAGGCCAATAGATATCCCAG+AGG 0.793787 1_1:+11684587 Msa0008080:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTAAT+AGG + chr1_1:11684451-11684470 Msa0008080:intron 0.0%
!!! TACTAAAAAATTGAATTTTT+TGG + chr1_1:11670463-11670482 Msa0008080:intron 10.0%
!!! ATTTATTTTTTTAATAACCA+TGG + chr1_1:11670736-11670755 Msa0008080:intron 10.0%
!!! TGATTTTTTTAATAATTGAT+TGG + chr1_1:11671798-11671817 Msa0008080:intron 10.0%
!! TAAATAATAAAAAGTTCAAA+AGG - chr1_1:11672174-11672193 None:intergenic 10.0%
!!! TATTTTAAGATTTAAAAGTT+GGG - chr1_1:11672660-11672679 None:intergenic 10.0%
!!! ATATTTTAAGATTTAAAAGT+TGG - chr1_1:11672661-11672680 None:intergenic 10.0%
!!! TTTGATTTTTATAATTTGAA+AGG - chr1_1:11673949-11673968 None:intergenic 10.0%
!!! TAATTTTTTTGTTATATTGT+TGG - chr1_1:11674006-11674025 None:intergenic 10.0%
!!! TTTTTATTTAAATTACACTA+GGG - chr1_1:11675258-11675277 None:intergenic 10.0%
!!! ATTTTTATTTAAATTACACT+AGG - chr1_1:11675259-11675278 None:intergenic 10.0%
!! ATTTATTACAATCTTATATA+TGG - chr1_1:11675729-11675748 None:intergenic 10.0%
!! ATATAAGATTGTAATAAATT+TGG + chr1_1:11675730-11675749 Msa0008080:intron 10.0%
!!! TATTTGAATTACTATATTTT+AGG + chr1_1:11676041-11676060 Msa0008080:intron 10.0%
!! GTAGAAATAATTAATTATTA+AGG - chr1_1:11682773-11682792 None:intergenic 10.0%
!! TATGTTAATAGTTATTAAAT+AGG - chr1_1:11682830-11682849 None:intergenic 10.0%
!! TGTATATTAATTATTTACAT+GGG - chr1_1:11685321-11685340 None:intergenic 10.0%
!! ATGTATATTAATTATTTACA+TGG - chr1_1:11685322-11685341 None:intergenic 10.0%
!!! TAAAATGACTTTAAAAATTA+TGG + chr1_1:11686218-11686237 Msa0008080:CDS 10.0%
!! CAAATAAATCTTAAAATATT+TGG - chr1_1:11686912-11686931 None:intergenic 10.0%
!!! ATATTTTAAGATTTATTTGT+TGG + chr1_1:11686913-11686932 Msa0008080:intron 10.0%
!!! TATTTTAAGATTTATTTGTT+GGG + chr1_1:11686914-11686933 Msa0008080:intron 10.0%
!! AAATAGTAATAAAAAAGAAA+AGG + chr1_1:11687230-11687249 Msa0008080:intron 10.0%
!! ATCAAATTTAAATTTATAAC+AGG - chr1_1:11687374-11687393 None:intergenic 10.0%
!! AAATTCATGATATAAATTTA+AGG + chr1_1:11689039-11689058 Msa0008080:intron 10.0%
!! TCATATTATAATCAAAATTA+CGG - chr1_1:11690601-11690620 None:intergenic 10.0%
!!! TTTTATAGATTTTTTTTTTG+AGG + chr1_1:11690636-11690655 Msa0008080:intron 10.0%
!! TTTGTATTTGTATTATATAT+AGG + chr1_1:11691586-11691605 Msa0008080:intron 10.0%
!! TTGAAACTTATTATTATTCT+TGG - chr1_1:11669666-11669685 None:intergenic 15.0%
!!! TGATACTAACATTAATTTTA+AGG - chr1_1:11669944-11669963 None:intergenic 15.0%
!!! ACTTATTTTAGAAATTCATT+AGG + chr1_1:11671056-11671075 Msa0008080:intron 15.0%
!!! AAACTCAATTTTTCTTATAA+AGG + chr1_1:11671325-11671344 Msa0008080:intron 15.0%
!!! AAGTAATTTTCTTTCTAAAA+TGG + chr1_1:11671576-11671595 Msa0008080:intron 15.0%
!!! TTTAGCATAATTGAAATTTT+AGG - chr1_1:11672551-11672570 None:intergenic 15.0%
!!! AAATATATTTTAATGAAGGT+AGG - chr1_1:11672979-11672998 None:intergenic 15.0%
!!! ACACAGAAATTTTAAAATTA+TGG + chr1_1:11673152-11673171 Msa0008080:intron 15.0%
!! AAAGAAAAAAACAATTGATA+AGG - chr1_1:11673492-11673511 None:intergenic 15.0%
!!! TATCAATTGTTTTTTTCTTT+AGG + chr1_1:11673492-11673511 Msa0008080:intron 15.0%
!!! TTATTTTTCATTTAGACATA+TGG + chr1_1:11673558-11673577 Msa0008080:intron 15.0%
!!! TTTTTTAGGAAATTTTGTTT+TGG + chr1_1:11673895-11673914 Msa0008080:intron 15.0%
!! GTTTCATTAAAAAAAAAGTT+AGG - chr1_1:11674032-11674051 None:intergenic 15.0%
!!! TTTTATTTAAATTACACTAG+GGG - chr1_1:11675257-11675276 None:intergenic 15.0%
!! ATTATATTGAGAGAAAAATA+AGG + chr1_1:11675370-11675389 Msa0008080:intron 15.0%
!! TAGAAATATAAATTGAGAAA+AGG - chr1_1:11675519-11675538 None:intergenic 15.0%
!! AAATTTGGTTGTAATAAATT+TGG + chr1_1:11675745-11675764 Msa0008080:intron 15.0%
!! AAAACAAATGAATTTACTAT+CGG - chr1_1:11676876-11676895 None:intergenic 15.0%
!!! AAATAACTAATAAGTTCTAA+AGG - chr1_1:11677197-11677216 None:intergenic 15.0%
!! ACATTAATGTAAATGATTAT+AGG + chr1_1:11677803-11677822 Msa0008080:intron 15.0%
!! AAATTTCACAAATCAATTTA+TGG - chr1_1:11679040-11679059 None:intergenic 15.0%
!!! ATCATTTTTCGAAATATATT+TGG - chr1_1:11680439-11680458 None:intergenic 15.0%
!! ACATTAATGTAAATGATTAT+AGG + chr1_1:11677803-11677822 Msa0008080:intron 15.0%
!! TTAATTAATATTACGTTGTT+GGG - chr1_1:11680825-11680844 None:intergenic 15.0%
!! ATTAATTAATATTACGTTGT+TGG - chr1_1:11680826-11680845 None:intergenic 15.0%
!!! TTTGGAGATATTTTAAATAT+TGG - chr1_1:11680927-11680946 None:intergenic 15.0%
!!! TCTTTTATGTATCATATTTT+TGG - chr1_1:11681082-11681101 None:intergenic 15.0%
!! AAATAACAATTATGAAAAAG+TGG + chr1_1:11682910-11682929 Msa0008080:intron 15.0%
!! AATAACAATTATGAAAAAGT+GGG + chr1_1:11682911-11682930 Msa0008080:intron 15.0%
!! TAAACTTATGAATGTATTAA+AGG - chr1_1:11683675-11683694 None:intergenic 15.0%
!!! ACAAAAAATAAAAGTGTTAA+GGG + chr1_1:11683883-11683902 Msa0008080:CDS 15.0%
!! ATTATAAAAAGAAAGAGAAA+AGG - chr1_1:11684031-11684050 None:intergenic 15.0%
!! TTTATATTCTATTTCATTCT+AGG - chr1_1:11684056-11684075 None:intergenic 15.0%
!! TAGAATGAAATAGAATATAA+AGG + chr1_1:11684055-11684074 Msa0008080:intron 15.0%
!! TAATATTGAATGATATGAAA+TGG - chr1_1:11684188-11684207 None:intergenic 15.0%
!! TATTAATAAGTGAAAAAAAG+TGG + chr1_1:11684247-11684266 Msa0008080:intron 15.0%
!!! ATAAGAAAAAAGAGTAATTT+TGG + chr1_1:11684303-11684322 Msa0008080:intron 15.0%
!!! TGTTGTATATTTGTTTTATA+CGG + chr1_1:11684717-11684736 Msa0008080:intron 15.0%
!! ATCAAATCATAACAAATATT+TGG - chr1_1:11684997-11685016 None:intergenic 15.0%
!!! AATATTTGTTATGATTTGAT+TGG + chr1_1:11684997-11685016 Msa0008080:intron 15.0%
!!! AAATAACTATTGTATTGTTT+TGG + chr1_1:11686283-11686302 Msa0008080:intron 15.0%
!!! ATTTCATCAAACATTTTATT+TGG - chr1_1:11686808-11686827 None:intergenic 15.0%
!! TTTCTTAAAAAATTGATGTT+TGG - chr1_1:11687280-11687299 None:intergenic 15.0%
!! ACAAAGAATTAAAAAAACAT+AGG - chr1_1:11687484-11687503 None:intergenic 15.0%
!!! TGTTTTTTTAATTCTTTGTA+TGG + chr1_1:11687485-11687504 Msa0008080:intron 15.0%
!! ATATGTCAAATAGAAATATT+GGG - chr1_1:11687612-11687631 None:intergenic 15.0%
!! AATATGTCAAATAGAAATAT+TGG - chr1_1:11687613-11687632 None:intergenic 15.0%
!! CATTATTTAAATTTACTTCA+TGG + chr1_1:11688194-11688213 Msa0008080:intron 15.0%
!! CTTGAAAAATATAAACAAAA+TGG + chr1_1:11690447-11690466 Msa0008080:CDS 15.0%
!!! ACTAATACAATAGTTTTTTA+TGG + chr1_1:11691405-11691424 Msa0008080:intron 15.0%
!!! TAGTTTTTTATGGTTATTTT+CGG + chr1_1:11691415-11691434 Msa0008080:intron 15.0%
!!! ATTTCATTTTTATCTGGAAT+CGG - chr1_1:11669729-11669748 None:intergenic 20.0%
!!! ATAAAAATGAAATGCTGTTT+GGG + chr1_1:11669736-11669755 Msa0008080:CDS 20.0%
!!! TTTTTTATTTCTTGTCAATC+AGG + chr1_1:11670288-11670307 Msa0008080:intron 20.0%
!!! TTTTTATTTCTTGTCAATCA+GGG + chr1_1:11670289-11670308 Msa0008080:intron 20.0%
!! TGTTTGTATTTATACATGAA+GGG - chr1_1:11670768-11670787 None:intergenic 20.0%
!! ATGTTTGTATTTATACATGA+AGG - chr1_1:11670769-11670788 None:intergenic 20.0%
!! ACTTAAATGTTACAAAAGTT+TGG + chr1_1:11670871-11670890 Msa0008080:intron 20.0%
!!! TTTTTTTGCTAACATGTTAT+TGG + chr1_1:11670899-11670918 Msa0008080:intron 20.0%
!! TTGAATTCTTAAATAAGAGA+AGG + chr1_1:11671083-11671102 Msa0008080:intron 20.0%
!! TGAATTCTTAAATAAGAGAA+GGG + chr1_1:11671084-11671103 Msa0008080:intron 20.0%
!!! TGAAGATTATAATTTTGAAG+CGG + chr1_1:11671259-11671278 Msa0008080:CDS 20.0%
!! CAGATGATTATATAAAATGA+TGG - chr1_1:11671475-11671494 None:intergenic 20.0%
!!! AACACTACATATATATCTTT+TGG + chr1_1:11671612-11671631 Msa0008080:intron 20.0%
!! AAATAAACTGAAGTTCTATT+GGG - chr1_1:11671677-11671696 None:intergenic 20.0%
!! TTTAATGTTTCCAATTTCTA+TGG + chr1_1:11671763-11671782 Msa0008080:intron 20.0%
!! AACTTAATTTCCATAGAAAT+TGG - chr1_1:11671776-11671795 None:intergenic 20.0%
!! GTTTATTTAACACAAATAAC+AGG - chr1_1:11672138-11672157 None:intergenic 20.0%
!!! TTTAAACTCTTTTATGTTGA+TGG + chr1_1:11672332-11672351 Msa0008080:intron 20.0%
!! GTCTAAAAATATGGATATAA+AGG + chr1_1:11672431-11672450 Msa0008080:intron 20.0%
!!! GTCATAAAGAGATAAATTTT+GGG - chr1_1:11673318-11673337 None:intergenic 20.0%
!!! AGTCATAAAGAGATAAATTT+TGG - chr1_1:11673319-11673338 None:intergenic 20.0%
!!! TGAATGCTGTTTTTTTTTTT+AGG + chr1_1:11673881-11673900 Msa0008080:intron 20.0%
!! GAAATAGATAATCATTATCA+TGG - chr1_1:11673976-11673995 None:intergenic 20.0%
!! GTTATTTGTATTCAAAATTG+AGG + chr1_1:11674202-11674221 Msa0008080:intron 20.0%
!!! AAATAATTTTATACTGTTGC+AGG + chr1_1:11674430-11674449 Msa0008080:intron 20.0%
!! AAGTACTCGATAAATATTTA+AGG + chr1_1:11674863-11674882 Msa0008080:intron 20.0%
!!! TTGATCCTTTAAGTTATTTT+TGG + chr1_1:11674930-11674949 Msa0008080:intron 20.0%
!!! ATCATTGTTTTTGTAATGTT+TGG + chr1_1:11675067-11675086 Msa0008080:intron 20.0%
!!! ATTGGTTCTTTAAGTTATTT+TGG - chr1_1:11675208-11675227 None:intergenic 20.0%
!!! TAAATTTTACTGTAGTAGAA+AGG - chr1_1:11675628-11675647 None:intergenic 20.0%
!! TGGATATGAAGTAATAATAT+AGG - chr1_1:11675980-11675999 None:intergenic 20.0%
!! TTACAGTTAATCAGATAAAA+TGG - chr1_1:11676000-11676019 None:intergenic 20.0%
!!! ATTACTATATTTTAGGTTCA+AGG + chr1_1:11676048-11676067 Msa0008080:intron 20.0%
!!! TTACTATATTTTAGGTTCAA+GGG + chr1_1:11676049-11676068 Msa0008080:intron 20.0%
!! AAATAAATTGCCTATAGTAT+TGG + chr1_1:11676132-11676151 Msa0008080:intron 20.0%
!! AATGTTATGTACATAATTAC+AGG + chr1_1:11676197-11676216 Msa0008080:intron 20.0%
!! ATGTTATGTACATAATTACA+GGG + chr1_1:11676198-11676217 Msa0008080:intron 20.0%
!!! TATTTTAGAGATTAAAACGA+AGG - chr1_1:11676508-11676527 None:intergenic 20.0%
!! TGAATGGCAAAATATATATA+AGG + chr1_1:11676703-11676722 Msa0008080:intron 20.0%
!! GAATGGCAAAATATATATAA+GGG + chr1_1:11676704-11676723 Msa0008080:intron 20.0%
!!! GTGTTTTTATTTTCACTTTT+TGG - chr1_1:11676751-11676770 None:intergenic 20.0%
!! AAACAAATGAATTTACTATC+GGG - chr1_1:11676875-11676894 None:intergenic 20.0%
!! GATGATTGATTACATTAATA+TGG + chr1_1:11677718-11677737 Msa0008080:intron 20.0%
!! TGCAATATATTAATCTCAAA+AGG - chr1_1:11678578-11678597 None:intergenic 20.0%
!!! ACATCTGATTTATTTTTCAA+TGG + chr1_1:11680407-11680426 Msa0008080:intron 20.0%
!! TTAATACTTGATATAGTGAA+TGG + chr1_1:11680552-11680571 Msa0008080:intron 20.0%
!! AAATAATGTTGAATATGTTG+AGG - chr1_1:11681025-11681044 None:intergenic 20.0%
!! TTTGGTAAAAGACTTAATAA+TGG - chr1_1:11681064-11681083 None:intergenic 20.0%
!!! ATTTAATTGAGGTGTTTTAT+GGG - chr1_1:11681930-11681949 None:intergenic 20.0%
!!! ACATTGTTCTAAATCATTTT+GGG - chr1_1:11682414-11682433 None:intergenic 20.0%
!!! AACATTGTTCTAAATCATTT+TGG - chr1_1:11682415-11682434 None:intergenic 20.0%
!!! TGATATGTAATTCTGAAAAT+TGG - chr1_1:11682550-11682569 None:intergenic 20.0%
!! TACATATCAAGATTATTGAA+AGG + chr1_1:11682561-11682580 Msa0008080:intron 20.0%
!! AAAGAATAAAATCAGTAAGT+GGG - chr1_1:11682714-11682733 None:intergenic 20.0%
!!! AAATAGGTATTTTTCTAAGT+GGG - chr1_1:11682814-11682833 None:intergenic 20.0%
!!! TAAATAGGTATTTTTCTAAG+TGG - chr1_1:11682815-11682834 None:intergenic 20.0%
!! ATACTATACACATAATAGAA+CGG - chr1_1:11683085-11683104 None:intergenic 20.0%
!!! CTATTGCTTTTCTTAATTTA+AGG + chr1_1:11683139-11683158 Msa0008080:intron 20.0%
!! GATTTATAATCAGAAAATAC+CGG - chr1_1:11683265-11683284 None:intergenic 20.0%
!!! TATTTATGATTGTTGCTTTT+TGG + chr1_1:11683578-11683597 Msa0008080:intron 20.0%
!! ACATTCATAAGTTTATGATA+TGG + chr1_1:11683680-11683699 Msa0008080:intron 20.0%
!! AGAAAAATAGAATGAGAAAA+AGG - chr1_1:11683798-11683817 None:intergenic 20.0%
!!! GACAAAAAATAAAAGTGTTA+AGG + chr1_1:11683882-11683901 Msa0008080:CDS 20.0%
!!! CAAAAAATAAAAGTGTTAAG+GGG + chr1_1:11683884-11683903 Msa0008080:CDS 20.0%
!!! ACTAACTTCTCTTTTATTTA+TGG - chr1_1:11684228-11684247 None:intergenic 20.0%
!! AAAAAAAAAAACACTGAAAG+TGG - chr1_1:11684440-11684459 None:intergenic 20.0%
!!! AGGATTTATATGATTTTAGT+AGG - chr1_1:11684528-11684547 None:intergenic 20.0%
!!! ACAACAAAATTTAACCTTTT+CGG - chr1_1:11684703-11684722 None:intergenic 20.0%
!!! TAGCTGTTGATAATATTAAA+TGG + chr1_1:11684788-11684807 Msa0008080:intron 20.0%
!!! TGTTGATAATATTAAATGGA+AGG + chr1_1:11684792-11684811 Msa0008080:intron 20.0%
!! AATCATAACAAATATTTGGT+TGG - chr1_1:11684993-11685012 None:intergenic 20.0%
!! AGAATTCAACTCATATTTAA+AGG - chr1_1:11685071-11685090 None:intergenic 20.0%
!! ACCAATTTGTCTTATAAAAA+GGG + chr1_1:11685218-11685237 Msa0008080:intron 20.0%
!! CTCAAAACAATAATTTACAA+AGG - chr1_1:11685731-11685750 None:intergenic 20.0%
!!! TTGTAAATTATTGTTTTGAG+TGG + chr1_1:11685731-11685750 Msa0008080:intron 20.0%
!! ACAAAAAACAAACTATTGAA+TGG + chr1_1:11686999-11687018 Msa0008080:intron 20.0%
!!! AAAAAATTCTGAAGTTATGT+AGG + chr1_1:11687297-11687316 Msa0008080:intron 20.0%
!! TAGATTCAAAATTCCATAAA+TGG - chr1_1:11687327-11687346 None:intergenic 20.0%
!! CATGAATACATAATGATTAA+AGG - chr1_1:11687428-11687447 None:intergenic 20.0%
!!! GAATTTTCATTTAACATATG+AGG - chr1_1:11687898-11687917 None:intergenic 20.0%
!!! TTTGAAGTTAAAGAGAATAA+TGG - chr1_1:11688112-11688131 None:intergenic 20.0%
!! TTTAAATAATGAACTAGTCA+TGG - chr1_1:11688185-11688204 None:intergenic 20.0%
!! TCATATGCTTACAATTAAAT+CGG + chr1_1:11688578-11688597 Msa0008080:CDS 20.0%
!! TGTCAGTTATGAATTATAAT+TGG + chr1_1:11688779-11688798 Msa0008080:intron 20.0%
!! AACTGTTATTAATTGAAGAT+AGG + chr1_1:11689511-11689530 Msa0008080:intron 20.0%
!! GACTACAAAAATTAAAAACA+TGG + chr1_1:11689865-11689884 Msa0008080:CDS 20.0%
!!! TTTTTTTTACAGAATGTTAG+CGG + chr1_1:11690362-11690381 Msa0008080:intron 20.0%
!!! TTTTTTTTGAGGAAAAACTA+TGG + chr1_1:11690647-11690666 Msa0008080:intron 20.0%
!!! TTTTTTTGAGGAAAAACTAT+GGG + chr1_1:11690648-11690667 Msa0008080:intron 20.0%
!! ATTAAAATGTACAAGTTTGA+AGG + chr1_1:11691310-11691329 Msa0008080:intron 20.0%
!! TTAAAATGTACAAGTTTGAA+GGG + chr1_1:11691311-11691330 Msa0008080:intron 20.0%
!!! AGTTTTTTATGGTTATTTTC+GGG + chr1_1:11691416-11691435 Msa0008080:intron 20.0%
!! ATCGAGATATAAAAAACATA+TGG + chr1_1:11691821-11691840 Msa0008080:CDS 20.0%
!!! ATCATCACTTTTCGTTTTTT+AGG - chr1_1:11669600-11669619 None:intergenic 25.0%
!!! AACAGCATTTCATTTTTATC+TGG - chr1_1:11669735-11669754 None:intergenic 25.0%
! GATAAAAATGAAATGCTGTT+TGG + chr1_1:11669735-11669754 Msa0008080:CDS 25.0%
!! TAAAAATGAAATGCTGTTTG+GGG + chr1_1:11669737-11669756 Msa0008080:CDS 25.0%
! GAAGTAGGTATTTGAAAATT+CGG + chr1_1:11669778-11669797 Msa0008080:CDS 25.0%
! AAGTAGGTATTTGAAAATTC+GGG + chr1_1:11669779-11669798 Msa0008080:CDS 25.0%
! AGAAGAAAAGTGAAATCAAT+TGG + chr1_1:11669820-11669839 Msa0008080:CDS 25.0%
! ATTCTCATTTAGTGTATGTT+TGG + chr1_1:11669971-11669990 Msa0008080:intron 25.0%
! AAACATGTCAGAATCAAATA+TGG - chr1_1:11670008-11670027 None:intergenic 25.0%
! ATATTTGATTCTGACATGTT+TGG + chr1_1:11670007-11670026 Msa0008080:intron 25.0%
!!! TACACAAATGTTTGATTTTG+CGG - chr1_1:11670232-11670251 None:intergenic 25.0%
!!! TTTTATTTCTTGTCAATCAG+GGG + chr1_1:11670290-11670309 Msa0008080:intron 25.0%
! ATGTGTATAATCCGATTAAA+GGG - chr1_1:11670375-11670394 None:intergenic 25.0%
! AATGTGTATAATCCGATTAA+AGG - chr1_1:11670376-11670395 None:intergenic 25.0%
! TTAATCGGATTATACACATT+CGG + chr1_1:11670376-11670395 Msa0008080:intron 25.0%
! AATGAGAAAGTGAATTTCAA+AGG - chr1_1:11670719-11670738 None:intergenic 25.0%
!!! ATAAGAGAACCTTTTAATTG+TGG + chr1_1:11670826-11670845 Msa0008080:intron 25.0%
! CAAACTTAATACTTTGCTTA+AGG + chr1_1:11670979-11670998 Msa0008080:intron 25.0%
! GCTTCAAAATTATAATCTTC+AGG - chr1_1:11671260-11671279 None:intergenic 25.0%
! AACACTATCATTCATTTATC+AGG + chr1_1:11671367-11671386 Msa0008080:intron 25.0%
!! TAGAAAGAGTTAGGTATTTT+AGG + chr1_1:11671546-11671565 Msa0008080:intron 25.0%
!! AGAAAGAGTTAGGTATTTTA+GGG + chr1_1:11671547-11671566 Msa0008080:intron 25.0%
! CAAATAAACTGAAGTTCTAT+TGG - chr1_1:11671678-11671697 None:intergenic 25.0%
!! CAATAGTTTGTCAAAAATGA+TGG - chr1_1:11671826-11671845 None:intergenic 25.0%
!!! TATTGTCTATTGTTTTTCCT+TGG + chr1_1:11671898-11671917 Msa0008080:intron 25.0%
! AAAAAGTTATGTACAACAAG+TGG - chr1_1:11671953-11671972 None:intergenic 25.0%
!! AAGATTACAATTTTTGACAG+TGG + chr1_1:11672002-11672021 Msa0008080:CDS 25.0%
!! AGATTACAATTTTTGACAGT+GGG + chr1_1:11672003-11672022 Msa0008080:CDS 25.0%
! TTAACACAAATAACAGGATA+TGG - chr1_1:11672132-11672151 None:intergenic 25.0%
! TTGATACATTCTAGATAAGT+TGG + chr1_1:11672199-11672218 Msa0008080:intron 25.0%
!! TGAATTCTGCTAAATGTTTT+AGG + chr1_1:11672382-11672401 Msa0008080:intron 25.0%
! GCTTAGTATGTCTAAAAATA+TGG + chr1_1:11672422-11672441 Msa0008080:intron 25.0%
! TACAGCTTAAAGATAGTAAT+AGG + chr1_1:11672472-11672491 Msa0008080:intron 25.0%
!!! GAAATTTTAGGACTTGTTTT+TGG - chr1_1:11672539-11672558 None:intergenic 25.0%
!! AACAAATCATAAAAGGCATA+TGG - chr1_1:11672735-11672754 None:intergenic 25.0%
!!! ATATGCCTTTTATGATTTGT+TGG + chr1_1:11672734-11672753 Msa0008080:intron 25.0%
! AGCTTAAAGATACTTCTATT+AGG - chr1_1:11672949-11672968 None:intergenic 25.0%
! GTTACTAGAAGTTTAGATAA+AGG - chr1_1:11673109-11673128 None:intergenic 25.0%
!!! TTTTGCTATTCTCATTTTAC+AGG + chr1_1:11673346-11673365 Msa0008080:intron 25.0%
!! TTTTTCATTTAGACATATGG+TGG + chr1_1:11673561-11673580 Msa0008080:intron 25.0%
! TCTATAATAAAGATCGTTGT+TGG - chr1_1:11674054-11674073 None:intergenic 25.0%
!!! TATCAACATCTTTCACTTTT+GGG - chr1_1:11674469-11674488 None:intergenic 25.0%
!! ATATCAACATCTTTCACTTT+TGG - chr1_1:11674470-11674489 None:intergenic 25.0%
!! GTAAAAACAATATTTTGTCG+AGG - chr1_1:11674674-11674693 None:intergenic 25.0%
! AATATAAATGCACATGTTCA+AGG - chr1_1:11674699-11674718 None:intergenic 25.0%
! GTTACAAACTTCAAACTTAA+AGG - chr1_1:11674907-11674926 None:intergenic 25.0%
! TGTGACCAAAAATAACTTAA+AGG - chr1_1:11674938-11674957 None:intergenic 25.0%
!!! ACATAAGTCTTTTAAGTTTG+AGG + chr1_1:11674957-11674976 Msa0008080:intron 25.0%
!!! ATTGGTCCTTTAAGTTATTT+TGG + chr1_1:11674990-11675009 Msa0008080:intron 25.0%
! GTTTGACCAAAATAACTTAA+AGG - chr1_1:11674999-11675018 None:intergenic 25.0%
! ACATTACAAAAACAATGATG+TGG - chr1_1:11675066-11675085 None:intergenic 25.0%
! GAAAACGTATACATACTTAA+AGG + chr1_1:11675109-11675128 Msa0008080:intron 25.0%
! TGTGACCAAAATAACTTAAA+AGG + chr1_1:11675139-11675158 Msa0008080:intron 25.0%
! GTGACCAAAATAACTTAAAA+GGG + chr1_1:11675140-11675159 Msa0008080:intron 25.0%
! ATTACAAACCTCAAACTTAA+AGG + chr1_1:11675170-11675189 Msa0008080:intron 25.0%
! TGTAATCTAATTTCTGATCT+TGG + chr1_1:11675395-11675414 Msa0008080:intron 25.0%
! AGCATATCTTAGTTGAAAAA+GGG - chr1_1:11675590-11675609 None:intergenic 25.0%
! TATAATTCATGTAGATACCA+TGG - chr1_1:11675895-11675914 None:intergenic 25.0%
! AAGGGAAATATACAAATCTA+AGG - chr1_1:11676097-11676116 None:intergenic 25.0%
! AAAACTTCCAAAACTTTAGT+CGG + chr1_1:11676280-11676299 Msa0008080:CDS 25.0%
!! GTAAACTTCTAACCTTTTAT+TGG + chr1_1:11676348-11676367 Msa0008080:intron 25.0%
! TATCGACAAATTCCAATAAA+AGG - chr1_1:11676363-11676382 None:intergenic 25.0%
! ATAAAATTTGTCTTGTGCTT+TGG + chr1_1:11676380-11676399 Msa0008080:intron 25.0%
!! AAATATTTTCCTCATTACGT+TGG + chr1_1:11676433-11676452 Msa0008080:intron 25.0%
! TAAAAAATACCAACGTAATG+AGG - chr1_1:11676445-11676464 None:intergenic 25.0%
!!! TCTGTCACTTTAAAATGTTA+AGG - chr1_1:11676553-11676572 None:intergenic 25.0%
! GACAGATTTCATATACTTTA+AGG + chr1_1:11676567-11676586 Msa0008080:intron 25.0%
!!! TCTTTTAGGAATTGTTGTTA+GGG - chr1_1:11676821-11676840 None:intergenic 25.0%
!!! TTCTTTTAGGAATTGTTGTT+AGG - chr1_1:11676822-11676841 None:intergenic 25.0%
! CTACATTAAATAGCAAGTTT+GGG - chr1_1:11677062-11677081 None:intergenic 25.0%
! ACTACATTAAATAGCAAGTT+TGG - chr1_1:11677063-11677082 None:intergenic 25.0%
!! ACTAACTTTCAATTAACTTG+CGG + chr1_1:11677116-11677135 Msa0008080:intron 25.0%
! GTTTATTATGTTTCTTTGCT+TGG + chr1_1:11677411-11677430 Msa0008080:intron 25.0%
! AACAATATTCATCAGAACAA+AGG - chr1_1:11677569-11677588 None:intergenic 25.0%
! TAATTATGTCGTGTGTATAA+AGG + chr1_1:11677632-11677651 Msa0008080:intron 25.0%
! AATTATGTCGTGTGTATAAA+GGG + chr1_1:11677633-11677652 Msa0008080:intron 25.0%
! CAAAATGAAGCATATATCTA+TGG - chr1_1:11678117-11678136 None:intergenic 25.0%
!! CATAGATATATGCTTCATTT+TGG + chr1_1:11678115-11678134 Msa0008080:intron 25.0%
! CAGAAAAATGCCAAAATTAA+TGG + chr1_1:11678449-11678468 Msa0008080:intron 25.0%
!! AGATTTTCTCTTAAGAACAT+GGG - chr1_1:11678813-11678832 None:intergenic 25.0%
!! TAGATTTTCTCTTAAGAACA+TGG - chr1_1:11678814-11678833 None:intergenic 25.0%
! GTTCTTAAGAGAAAATCTAT+TGG + chr1_1:11678815-11678834 Msa0008080:CDS 25.0%
! AAGAGAAAATCTATTGGAAA+TGG + chr1_1:11678821-11678840 Msa0008080:CDS 25.0%
! AATAAAGTCGTGTATGAATT+GGG + chr1_1:11678848-11678867 Msa0008080:CDS 25.0%
!! AATAGTGAGAATTAGTTTGA+TGG + chr1_1:11679192-11679211 Msa0008080:intron 25.0%
!! ATCATATTGTTGACTGAAAA+TGG - chr1_1:11679348-11679367 None:intergenic 25.0%
!!! GTATGGTAGAATTTTTTGTT+TGG + chr1_1:11679513-11679532 Msa0008080:intron 25.0%
! ATTAAGATGTATATGGAAAG+TGG + chr1_1:11679848-11679867 Msa0008080:intron 25.0%
!! TGTGTAAATTTATTGGTTGT+AGG + chr1_1:11679897-11679916 Msa0008080:intron 25.0%
! AAGACAAATGGAATAGAATT+AGG + chr1_1:11679963-11679982 Msa0008080:intron 25.0%
! ATTTCTCTATATTCTGACAA+TGG - chr1_1:11680329-11680348 None:intergenic 25.0%
! TCAGAATATAGAGAAATGAT+AGG + chr1_1:11680332-11680351 Msa0008080:intron 25.0%
!! TCAACAACACTTTTGAATTT+AGG + chr1_1:11680371-11680390 Msa0008080:intron 25.0%
! TAATCATCTAATGACCTAAT+AGG + chr1_1:11680482-11680501 Msa0008080:intron 25.0%
! GATTATTTACTCAGATGTAT+GGG - chr1_1:11680514-11680533 None:intergenic 25.0%
! AGATTATTTACTCAGATGTA+TGG - chr1_1:11680515-11680534 None:intergenic 25.0%
!! TTGTTGATGCTATGTTTTAT+TGG + chr1_1:11680603-11680622 Msa0008080:intron 25.0%
! AAAATACAACATATCACAAC+AGG + chr1_1:11681290-11681309 Msa0008080:intron 25.0%
!! CAAAACTTAATTGCTATTGA+AGG - chr1_1:11681884-11681903 None:intergenic 25.0%
!!! GATTTAATTGAGGTGTTTTA+TGG - chr1_1:11681931-11681950 None:intergenic 25.0%
! AAGTGTTAGTGATTTAATTG+AGG - chr1_1:11681941-11681960 None:intergenic 25.0%
!!! TAATTGAGTTAGCTTTCTAA+TGG - chr1_1:11682110-11682129 None:intergenic 25.0%
!!! CATTTTAGTTCTGGAAAAAT+CGG - chr1_1:11682250-11682269 None:intergenic 25.0%
!!! CTAAATTTCCATTTTAGTTC+TGG - chr1_1:11682259-11682278 None:intergenic 25.0%
! TGGAAATTTAGATCAGAAAA+TGG + chr1_1:11682268-11682287 Msa0008080:intron 25.0%
! AAATTTAGATCAGAAAATGG+TGG + chr1_1:11682271-11682290 Msa0008080:intron 25.0%
!!! ATTGTTCTAAATCATTTTGG+GGG - chr1_1:11682412-11682431 None:intergenic 25.0%
!!! CATTGTTCTAAATCATTTTG+GGG - chr1_1:11682413-11682432 None:intergenic 25.0%
!! AGAAAACTAATCTAAGGTAA+GGG - chr1_1:11682594-11682613 None:intergenic 25.0%
! GAATTCAGAAAACTAATCTA+AGG - chr1_1:11682600-11682619 None:intergenic 25.0%
! GAAAGAATAAAATCAGTAAG+TGG - chr1_1:11682715-11682734 None:intergenic 25.0%
! TAATTATTAAGGGAAAGAGT+AGG - chr1_1:11682762-11682781 None:intergenic 25.0%
!! AATAGGTATTTTTCTAAGTG+GGG - chr1_1:11682813-11682832 None:intergenic 25.0%
!! AATATTAATGCCTTTTCAGA+CGG + chr1_1:11683170-11683189 Msa0008080:intron 25.0%
! AAAATTTCAGATAAACAGAC+CGG + chr1_1:11683243-11683262 Msa0008080:CDS 25.0%
! TATTCTTGTTCTATTTGTGA+AGG - chr1_1:11683405-11683424 None:intergenic 25.0%
! AGGTTTATTTATTCCTTTGT+TGG - chr1_1:11683645-11683664 None:intergenic 25.0%
! TCATAAGTTTATGATATGGA+TGG + chr1_1:11683684-11683703 Msa0008080:intron 25.0%
!! ACTTCTTATTTACCTCTAAT+CGG - chr1_1:11684100-11684119 None:intergenic 25.0%
! CATTAGAAAAGAAAGAAAAC+CGG - chr1_1:11684276-11684295 None:intergenic 25.0%
!! ACTATAAATTAAGCTTTGAC+TGG + chr1_1:11684403-11684422 Msa0008080:intron 25.0%
!!! TTTTTTTAATAGGAGAAGCT+CGG + chr1_1:11684461-11684480 Msa0008080:intron 25.0%
! GTGAATATAGACAACTTTAT+AGG - chr1_1:11684548-11684567 None:intergenic 25.0%
!!! TGTATATTTGTTTTATACGG+TGG + chr1_1:11684720-11684739 Msa0008080:intron 25.0%
!! GATGTGGTAAGTATTTTATT+TGG + chr1_1:11684895-11684914 Msa0008080:intron 25.0%
! GTGTAAAAAGAATTTACACA+TGG - chr1_1:11685025-11685044 None:intergenic 25.0%
! ACAAAAAACAAAAAACTACC+AGG - chr1_1:11685131-11685150 None:intergenic 25.0%
! CACCAATTTGTCTTATAAAA+AGG + chr1_1:11685217-11685236 Msa0008080:intron 25.0%
!! TCCCTTTTTATAAGACAAAT+TGG - chr1_1:11685222-11685241 None:intergenic 25.0%
! ACTTTCTTCTCTTATAAACA+AGG + chr1_1:11685367-11685386 Msa0008080:intron 25.0%
! CTTTCTTCTCTTATAAACAA+GGG + chr1_1:11685368-11685387 Msa0008080:intron 25.0%
!!! ATGTGACTTATTTTATGTCA+TGG - chr1_1:11685503-11685522 None:intergenic 25.0%
!!! GGTTAATGAAGATTTTTAGA+AGG - chr1_1:11685618-11685637 None:intergenic 25.0%
! AACAAATGATTTACTGTACA+GGG + chr1_1:11686038-11686057 Msa0008080:intron 25.0%
!!! TCATCCGGAATTTTTTTAAA+CGG - chr1_1:11686123-11686142 None:intergenic 25.0%
!!! AAGTCATTTTATCAAATGAG+AGG - chr1_1:11686209-11686228 None:intergenic 25.0%
! AATGATTACAAGTAGTGAAT+TGG + chr1_1:11686325-11686344 Msa0008080:CDS 25.0%
!!! ATTTGTGTCATTTATTCATC+AGG + chr1_1:11686442-11686461 Msa0008080:intron 25.0%
! ACCTAAAAGTAACACTATAT+GGG + chr1_1:11686703-11686722 Msa0008080:intron 25.0%
!!! TCTCATATAGTGTTACTTTT+AGG - chr1_1:11686762-11686781 None:intergenic 25.0%
! TAAAAGTAACACTATATGAG+AGG + chr1_1:11686761-11686780 Msa0008080:intron 25.0%
! AAAAGTAACACTATATGAGA+GGG + chr1_1:11686762-11686781 Msa0008080:intron 25.0%
!! TTAAGATTTATTTGTTGGGT+TGG + chr1_1:11686918-11686937 Msa0008080:intron 25.0%
! ACAAACTATTGAATGGTATA+TGG + chr1_1:11687006-11687025 Msa0008080:intron 25.0%
!! TGAATGGTATATGGATTAAA+TGG + chr1_1:11687015-11687034 Msa0008080:intron 25.0%
!! TGTTCTTTTGAATCAATCAA+CGG + chr1_1:11687053-11687072 Msa0008080:intron 25.0%
!!! AAAGCTTTGTTTCAATTTTC+TGG + chr1_1:11687115-11687134 Msa0008080:intron 25.0%
! TTATGTAGGTATACCATTTA+TGG + chr1_1:11687311-11687330 Msa0008080:intron 25.0%
! TGTATTCATGCAAAACAATT+TGG + chr1_1:11687438-11687457 Msa0008080:intron 25.0%
! ATGTTAGAAACACAAATATG+TGG - chr1_1:11687557-11687576 None:intergenic 25.0%
! TTCTATATGTATCAAACATC+TGG - chr1_1:11687654-11687673 None:intergenic 25.0%
!! GGATAAATATTTTGCATTGA+TGG + chr1_1:11687785-11687804 Msa0008080:intron 25.0%
! TAACATATGAGGAAAAAACA+GGG - chr1_1:11687887-11687906 None:intergenic 25.0%
! TTAACATATGAGGAAAAAAC+AGG - chr1_1:11687888-11687907 None:intergenic 25.0%
! AAATGAAAATTCTGATCTAC+AGG + chr1_1:11687906-11687925 Msa0008080:intron 25.0%
! GATAAAGGAAAAATTGATCT+TGG + chr1_1:11687934-11687953 Msa0008080:CDS 25.0%
!! CTTACAATTTGTTTGATTCA+TGG + chr1_1:11688027-11688046 Msa0008080:intron 25.0%
! AAAATTTAGATCTGTAGCTA+AGG - chr1_1:11688073-11688092 None:intergenic 25.0%
! AGAATAATGGTAAGTAACAT+AGG - chr1_1:11688099-11688118 None:intergenic 25.0%
!!! ATGTAGGTTAAATTTGTTAG+AGG + chr1_1:11688145-11688164 Msa0008080:intron 25.0%
!!! TTAAATTTGTTAGAGGTTGT+GGG + chr1_1:11688152-11688171 Msa0008080:intron 25.0%
! TTGTGCTAAATGAAAATTTC+AGG + chr1_1:11688394-11688413 Msa0008080:intron 25.0%
! TAATTGTAAGCATATGAAAC+TGG - chr1_1:11688575-11688594 None:intergenic 25.0%
! CATATGCTTACAATTAAATC+GGG + chr1_1:11688579-11688598 Msa0008080:CDS 25.0%
!! ATGATAACAACAAACTTGTT+AGG + chr1_1:11689093-11689112 Msa0008080:intron 25.0%
! AGGATGAAATTATTTGTTCA+TGG + chr1_1:11689174-11689193 Msa0008080:intron 25.0%
! AAGATTAATGACTTTGAACT+TGG + chr1_1:11689262-11689281 Msa0008080:intron 25.0%
! TAATTGAAGATAGGACAAAA+AGG + chr1_1:11689520-11689539 Msa0008080:intron 25.0%
! AATTGAAGATAGGACAAAAA+GGG + chr1_1:11689521-11689540 Msa0008080:intron 25.0%
!! CTTTTTGTTCAATCTTCAAT+TGG - chr1_1:11689617-11689636 None:intergenic 25.0%
! TAAGTATAACAATGTGGTAA+CGG - chr1_1:11689670-11689689 None:intergenic 25.0%
! TTACCACATTGTTATACTTA+AGG + chr1_1:11689670-11689689 Msa0008080:intron 25.0%
! ATTCCTTAAGTATAACAATG+TGG - chr1_1:11689676-11689695 None:intergenic 25.0%
!!! AATGATGTGTTTTGTTTGTT+TGG + chr1_1:11689693-11689712 Msa0008080:intron 25.0%
!! TTTGTTTGTTTGGAGTATAA+TGG + chr1_1:11689703-11689722 Msa0008080:intron 25.0%
! CATGTTCAACATTATCAATT+AGG + chr1_1:11689803-11689822 Msa0008080:intron 25.0%
!! TTTTGTAGTCATTTCTTCTT+TGG - chr1_1:11689855-11689874 None:intergenic 25.0%
! ACTTCTTGGAAGATATAATT+GGG + chr1_1:11689945-11689964 Msa0008080:CDS 25.0%
!!! TGAAGATTGTTTAGAGTTTT+TGG - chr1_1:11690051-11690070 None:intergenic 25.0%
! ATCTTGCATTTCATTATCAT+TGG + chr1_1:11690071-11690090 Msa0008080:intron 25.0%
! CATTTCATTATCATTGGTAA+AGG + chr1_1:11690077-11690096 Msa0008080:intron 25.0%
! TTGGTAAAGGATAAAATTCT+TGG + chr1_1:11690090-11690109 Msa0008080:intron 25.0%
! CACAATCATCATAATTACAT+TGG - chr1_1:11690141-11690160 None:intergenic 25.0%
! CAATGTAATTATGATGATTG+TGG + chr1_1:11690139-11690158 Msa0008080:intron 25.0%
!!! TTATGGGTTTTGAAGATATA+AGG + chr1_1:11690547-11690566 Msa0008080:CDS 25.0%
! TTTGAAGATATAAGGTAATG+TGG + chr1_1:11690555-11690574 Msa0008080:intron 25.0%
! TATAATCAAAATTACGGTCA+TGG - chr1_1:11690595-11690614 None:intergenic 25.0%
! TAAAATGTACAAGTTTGAAG+GGG + chr1_1:11691312-11691331 Msa0008080:intron 25.0%
!! TTTAGAGCATAAAATACAAC+TGG - chr1_1:11691384-11691403 None:intergenic 25.0%
! GTAAAAAGTCAGACATTTAA+AGG - chr1_1:11691526-11691545 None:intergenic 25.0%
! TAGAAAACAGAATAGTTAGA+TGG - chr1_1:11691629-11691648 None:intergenic 25.0%
!! ATCTAACTATTCTGTTTTCT+AGG + chr1_1:11691628-11691647 Msa0008080:intron 25.0%
! TTACTACTGAAGATTGAAAA+AGG + chr1_1:11691741-11691760 Msa0008080:CDS 25.0%
!!! TCACTTTTCGTTTTTTAGGA+GGG - chr1_1:11669596-11669615 None:intergenic 30.0%
!!! ATCACTTTTCGTTTTTTAGG+AGG - chr1_1:11669597-11669616 None:intergenic 30.0%
AATATCTTTACCATCGTTGT+TGG - chr1_1:11669631-11669650 None:intergenic 30.0%
! ACTTTTCTTCTTCATGGATT+TGG - chr1_1:11669811-11669830 None:intergenic 30.0%
!! GATTTCACTTTTCTTCTTCA+TGG - chr1_1:11669817-11669836 None:intergenic 30.0%
! ATCCTTGATCTTGTTATCAT+TGG - chr1_1:11669874-11669893 None:intergenic 30.0%
AAGTGAGTTAAAGGTAAAGT+GGG - chr1_1:11670172-11670191 None:intergenic 30.0%
AAAGTGAGTTAAAGGTAAAG+TGG - chr1_1:11670173-11670192 None:intergenic 30.0%
TTCTGACTAAAGTGAGTTAA+AGG - chr1_1:11670181-11670200 None:intergenic 30.0%
TGTGTATAATCCGATTAAAG+GGG - chr1_1:11670374-11670393 None:intergenic 30.0%
TAATCGGATTATACACATTC+GGG + chr1_1:11670377-11670396 Msa0008080:intron 30.0%
ATATTTCGATCAAGATCAGA+TGG + chr1_1:11670409-11670428 Msa0008080:intron 30.0%
AGATGGTCTATATTCAAACT+CGG + chr1_1:11670426-11670445 Msa0008080:intron 30.0%
TGAACAGAAATTCATGCATT+TGG - chr1_1:11670522-11670541 None:intergenic 30.0%
TGACAAAATTGAATTCTCTG+CGG - chr1_1:11670551-11670570 None:intergenic 30.0%
!! TAATGTTTTTAAAGAGCCAG+TGG + chr1_1:11670577-11670596 Msa0008080:intron 30.0%
TCTAAACACTTTGTCTTTAG+TGG - chr1_1:11670613-11670632 None:intergenic 30.0%
AGTTATACTCTTTCCTTTCT+TGG + chr1_1:11670678-11670697 Msa0008080:intron 30.0%
TTGTATTTATACATGAAGGG+AGG - chr1_1:11670765-11670784 None:intergenic 30.0%
ACAGTTTCACCACAATTAAA+AGG - chr1_1:11670838-11670857 None:intergenic 30.0%
AAGAGAAGGGAAAATGAAAT+TGG + chr1_1:11671097-11671116 Msa0008080:intron 30.0%
! GTTTATAGTCTGTTTTGCTA+AGG - chr1_1:11671309-11671328 None:intergenic 30.0%
AAAGATAACAGGAAGCTAAT+CGG + chr1_1:11671422-11671441 Msa0008080:CDS 30.0%
ATAACACTAATGTCAAACAG+TGG - chr1_1:11671522-11671541 None:intergenic 30.0%
GTTATGTTGTAGAAAGAGTT+AGG + chr1_1:11671537-11671556 Msa0008080:intron 30.0%
ATGAGAATTCCATCGTAAAA+TGG + chr1_1:11672045-11672064 Msa0008080:CDS 30.0%
!! TACATTCTAGATAAGTTGGT+CGG + chr1_1:11672203-11672222 Msa0008080:intron 30.0%
TTTCATTGCATGTAAATCCT+TGG + chr1_1:11672256-11672275 Msa0008080:intron 30.0%
TCTTCATTTATTCAGAGCAA+AGG - chr1_1:11672622-11672641 None:intergenic 30.0%
GCAAACCAACAAATCATAAA+AGG - chr1_1:11672742-11672761 None:intergenic 30.0%
ATGAAGAATACCATTAGGTA+TGG - chr1_1:11672874-11672893 None:intergenic 30.0%
CGAAAATGAAGAATACCATT+AGG - chr1_1:11672879-11672898 None:intergenic 30.0%
TATGTTCAACGATGATTGAA+GGG - chr1_1:11672912-11672931 None:intergenic 30.0%
TTGTTGTAACATGCTCAAAT+AGG + chr1_1:11673020-11673039 Msa0008080:intron 30.0%
TACCTGCATAAATCATATCT+TGG + chr1_1:11673068-11673087 Msa0008080:intron 30.0%
! ATAAATCATATCTTGGTGAC+TGG + chr1_1:11673075-11673094 Msa0008080:intron 30.0%
TATCCAAACATTCCAAAACA+AGG - chr1_1:11673209-11673228 None:intergenic 30.0%
!!! TGTTTTGGAATGTTTGGATA+TGG + chr1_1:11673209-11673228 Msa0008080:CDS 30.0%
!!! GTTTTGGAATGTTTGGATAT+GGG + chr1_1:11673210-11673229 Msa0008080:CDS 30.0%
!!! TTTTGGAATGTTTGGATATG+GGG + chr1_1:11673211-11673230 Msa0008080:CDS 30.0%
TTTCTTTACATGCTTTGTCT+TGG - chr1_1:11673388-11673407 None:intergenic 30.0%
TAAAGAAAGTCTACGAGTTA+TGG + chr1_1:11673400-11673419 Msa0008080:CDS 30.0%
TTTCAATATTCTCAACTAGC+AGG + chr1_1:11673520-11673539 Msa0008080:intron 30.0%
TAATATACATCTCTCGTGTT+TGG + chr1_1:11673640-11673659 Msa0008080:intron 30.0%
AGAGGAAGAAATTTAATGGA+GGG + chr1_1:11673706-11673725 Msa0008080:intron 30.0%
AGTGAAAGTCCTATATGATA+TGG + chr1_1:11673750-11673769 Msa0008080:intron 30.0%
! TTTTGCAGAAGATTGAAGAA+AGG + chr1_1:11674337-11674356 Msa0008080:intron 30.0%
TAGTTGTAGTAAGAAAGAGT+GGG + chr1_1:11674380-11674399 Msa0008080:intron 30.0%
TATCACACCAATTGAATTTC+AGG + chr1_1:11674764-11674783 Msa0008080:CDS 30.0%
! TTTAAGGCTAAATTACACCA+TGG + chr1_1:11674879-11674898 Msa0008080:intron 30.0%
TTAAGGCTAAATTACACCAT+GGG + chr1_1:11674880-11674899 Msa0008080:intron 30.0%
! GTTTGAGGTTTGTAATTGAT+TGG + chr1_1:11674972-11674991 Msa0008080:intron 30.0%
TGTAATGTTTGGTTAACAGA+AGG + chr1_1:11675078-11675097 Msa0008080:intron 30.0%
!!! TTGGCCCTTTTAAGTTATTT+TGG - chr1_1:11675147-11675166 None:intergenic 30.0%
! GTTTGAGGTTTGTAATAGAT+TGG - chr1_1:11675166-11675185 None:intergenic 30.0%
! GTTTGAGGTTTGTAACATAT+TGG - chr1_1:11675226-11675245 None:intergenic 30.0%
CAGCATATCTTAGTTGAAAA+AGG - chr1_1:11675591-11675610 None:intergenic 30.0%
ATGTCTTATAATCAAGACCA+TGG + chr1_1:11675875-11675894 Msa0008080:CDS 30.0%
TGTATATTTCCCTTTCACAA+AGG + chr1_1:11676103-11676122 Msa0008080:CDS 30.0%
TTTGTGTTACCTTTGTGAAA+GGG - chr1_1:11676115-11676134 None:intergenic 30.0%
ATTTGTGTTACCTTTGTGAA+AGG - chr1_1:11676116-11676135 None:intergenic 30.0%
TAGACAAAGTCCAATACTAT+AGG - chr1_1:11676145-11676164 None:intergenic 30.0%
GTACATAACATTCATTTGAC+TGG - chr1_1:11676189-11676208 None:intergenic 30.0%
ATGTACATAATTACAGGGAA+AGG + chr1_1:11676203-11676222 Msa0008080:intron 30.0%
!! GAGAATTTTGGAAACTTTGA+AGG + chr1_1:11676236-11676255 Msa0008080:CDS 30.0%
AAACTTCCAAAACTTTAGTC+GGG + chr1_1:11676281-11676300 Msa0008080:CDS 30.0%
!!! GAGGAAAATATTTTTAGCTC+AGG - chr1_1:11676426-11676445 None:intergenic 30.0%
!! CACTTTTTGGTGTAATACTT+GGG - chr1_1:11676738-11676757 None:intergenic 30.0%
!!! TCACTTTTTGGTGTAATACT+TGG - chr1_1:11676739-11676758 None:intergenic 30.0%
!! CTTTTAGGAATTGTTGTTAG+GGG - chr1_1:11676820-11676839 None:intergenic 30.0%
! AGTTACAATTCTTTTGGATC+AGG + chr1_1:11677259-11677278 Msa0008080:intron 30.0%
TTGTTCCTTAAGTCCATAAA+AGG - chr1_1:11677293-11677312 None:intergenic 30.0%
CATAAAGTGTGCATAACATA+CGG - chr1_1:11677392-11677411 None:intergenic 30.0%
TTTCTGCAATTTAGAAAGTC+TGG - chr1_1:11677446-11677465 None:intergenic 30.0%
!! TTTTGTTTGTGAACAAGTTC+GGG - chr1_1:11678087-11678106 None:intergenic 30.0%
!!! GTTTTGTTTGTGAACAAGTT+CGG - chr1_1:11678088-11678107 None:intergenic 30.0%
AGAAAAATGAGATATGCAGA+TGG + chr1_1:11678351-11678370 Msa0008080:intron 30.0%
GAAAAATGAGATATGCAGAT+GGG + chr1_1:11678352-11678371 Msa0008080:intron 30.0%
AAAAATGAGATATGCAGATG+GGG + chr1_1:11678353-11678372 Msa0008080:intron 30.0%
! CATCTGTGAAAGCATAAATA+TGG + chr1_1:11678409-11678428 Msa0008080:intron 30.0%
! TGTGAAAGCATAAATATGGA+AGG + chr1_1:11678413-11678432 Msa0008080:intron 30.0%
! CTAAAGGCTACCATTAATTT+TGG - chr1_1:11678462-11678481 None:intergenic 30.0%
ACTCATCACAGGAAAATAAT+AGG - chr1_1:11678606-11678625 None:intergenic 30.0%
! TATTATTTTCCTGTGATGAG+TGG + chr1_1:11678605-11678624 Msa0008080:CDS 30.0%
GAATAAAGTCGTGTATGAAT+TGG + chr1_1:11678847-11678866 Msa0008080:CDS 30.0%
TGAAATTTGCACACATGATT+TGG + chr1_1:11679052-11679071 Msa0008080:intron 30.0%
! AGAATTAGTTTGATGGTTTG+AGG + chr1_1:11679199-11679218 Msa0008080:intron 30.0%
TAGATACAAAGCACAATTAG+TGG - chr1_1:11679287-11679306 None:intergenic 30.0%
ACAATATGATGATTCACTAG+TGG + chr1_1:11679358-11679377 Msa0008080:intron 30.0%
!! TCTATCGACTTCTGAAAATT+TGG - chr1_1:11679488-11679507 None:intergenic 30.0%
CGGTTGTATTAAGATGTATA+TGG + chr1_1:11679841-11679860 Msa0008080:intron 30.0%
TATATGGAAAGTGGTTATCA+TGG + chr1_1:11679857-11679876 Msa0008080:intron 30.0%
TCTATTCCATTTGTCTTTGT+AGG - chr1_1:11679960-11679979 None:intergenic 30.0%
CAAATGGAATAGAATTAGGT+TGG + chr1_1:11679967-11679986 Msa0008080:intron 30.0%
TGGAGTTTATTACTGTTATG+TGG + chr1_1:11679987-11680006 Msa0008080:intron 30.0%
!! AATGTTTGTTTGGTGATGAA+GGG + chr1_1:11680055-11680074 Msa0008080:intron 30.0%
TCTGAGTAAATAATCTCAAG+CGG + chr1_1:11680519-11680538 Msa0008080:intron 30.0%
!! TATCAAGTATTAAGAGCACT+AGG - chr1_1:11680545-11680564 None:intergenic 30.0%
CATGTATCTCAAAAAGTCAT+AGG - chr1_1:11680581-11680600 None:intergenic 30.0%
!!! CTATGACTTTTTGAGATACA+TGG + chr1_1:11680579-11680598 Msa0008080:intron 30.0%
! ATTTTCATTGACGTTGGATT+TGG - chr1_1:11680989-11681008 None:intergenic 30.0%
! GAGTGTGTCATAATTGTTTT+AGG - chr1_1:11681761-11681780 None:intergenic 30.0%
! TAACACTTAAGTTTGAAGCT+GGG + chr1_1:11681953-11681972 Msa0008080:intron 30.0%
TTAGTCCAAAAACTTATGGT+TGG - chr1_1:11681982-11682001 None:intergenic 30.0%
CTAGTTAGTCCAAAAACTTA+TGG - chr1_1:11681986-11682005 None:intergenic 30.0%
!! AAATTTTCTGAAGACTCACT+TGG + chr1_1:11682031-11682050 Msa0008080:intron 30.0%
! AACTTTTATGTTTACACCGA+AGG + chr1_1:11682135-11682154 Msa0008080:intron 30.0%
!!! TTCTGTTTTGAATTAGCCTT+CGG - chr1_1:11682154-11682173 None:intergenic 30.0%
AATGTGAGTATTTCCTAGAT+TGG + chr1_1:11682184-11682203 Msa0008080:intron 30.0%
! CGATTTTTCCAGAACTAAAA+TGG + chr1_1:11682248-11682267 Msa0008080:intron 30.0%
GAATTATGTTGTTGAATGCA+TGG - chr1_1:11682480-11682499 None:intergenic 30.0%
! AATTGTTGTTCTTGAGGTTA+GGG - chr1_1:11682525-11682544 None:intergenic 30.0%
! CAGAAAACTAATCTAAGGTA+AGG - chr1_1:11682595-11682614 None:intergenic 30.0%
! ATAGGTATTTTTCTAAGTGG+GGG - chr1_1:11682812-11682831 None:intergenic 30.0%
TTCTTCAAAGCAATGGTAAA+AGG - chr1_1:11683213-11683232 None:intergenic 30.0%
TAGAACAAGAATACCATGAA+TGG + chr1_1:11683412-11683431 Msa0008080:CDS 30.0%
GCATTTCTAATATCCATTCA+TGG - chr1_1:11683428-11683447 None:intergenic 30.0%
! AATGTATTAAAGGATTAGCG+AGG - chr1_1:11683665-11683684 None:intergenic 30.0%
!! TTCAAGCAAAAAGTACTCTA+TGG - chr1_1:11683948-11683967 None:intergenic 30.0%
! CTTCTTATTTACCTCTAATC+GGG - chr1_1:11684099-11684118 None:intergenic 30.0%
GATTAGAGGTAAATAAGAAG+TGG + chr1_1:11684099-11684118 Msa0008080:intron 30.0%
AAGTGAAAAAAAGTGGAAAC+CGG + chr1_1:11684254-11684273 Msa0008080:intron 30.0%
!!! GTAATTTTGGTAATGAGTGA+AGG + chr1_1:11684316-11684335 Msa0008080:intron 30.0%
!! GTGGTAAGTATTTTATTTGG+AGG + chr1_1:11684898-11684917 Msa0008080:intron 30.0%
! TTTGATGATACTATGTCCTT+GGG - chr1_1:11685101-11685120 None:intergenic 30.0%
GTATCATCAAAGTTTATTCC+TGG + chr1_1:11685110-11685129 Msa0008080:intron 30.0%
! TGAATTCATGCAATTTTCGA+AGG - chr1_1:11685639-11685658 None:intergenic 30.0%
TGCAATGAAATATAGTGCAT+TGG + chr1_1:11685756-11685775 Msa0008080:intron 30.0%
!! CATTGGTAATTTTATCTGCT+AGG + chr1_1:11685773-11685792 Msa0008080:intron 30.0%
TCCTTCACAAAACTATAACA+TGG + chr1_1:11685958-11685977 Msa0008080:intron 30.0%
!!! TCCATGTTATAGTTTTGTGA+AGG - chr1_1:11685962-11685981 None:intergenic 30.0%
CAACAAATGATTTACTGTAC+AGG + chr1_1:11686037-11686056 Msa0008080:intron 30.0%
AGCTCCGTTTAAAAAAATTC+CGG + chr1_1:11686116-11686135 Msa0008080:CDS 30.0%
!!! TGTTTTGGAATGTTTAACAC+AGG + chr1_1:11686298-11686317 Msa0008080:intron 30.0%
! ATCAAAGTAGTTCTATAGCT+GGG - chr1_1:11686362-11686381 None:intergenic 30.0%
! AATCAAAGTAGTTCTATAGC+TGG - chr1_1:11686363-11686382 None:intergenic 30.0%
! TTTTTGTATTCAGTTTCTCC+TGG + chr1_1:11686512-11686531 Msa0008080:intron 30.0%
!! AGTTGGTCTTCTCTTATATT+AGG - chr1_1:11686563-11686582 None:intergenic 30.0%
!!! TGTTTTAGTTCATTCACTTG+TGG + chr1_1:11686672-11686691 Msa0008080:intron 30.0%
GACCTAAAAGTAACACTATA+TGG + chr1_1:11686702-11686721 Msa0008080:intron 30.0%
!!! TCCCATATAGTGTTACTTTT+AGG - chr1_1:11686707-11686726 None:intergenic 30.0%
TAAAAGTAACACTATATGGG+AGG + chr1_1:11686706-11686725 Msa0008080:intron 30.0%
!! ATTTATTTGTTGGGTTGGAT+CGG + chr1_1:11686923-11686942 Msa0008080:intron 30.0%
! AAAGCTTTGACCTACAAAAT+CGG - chr1_1:11687103-11687122 None:intergenic 30.0%
!! CTTTGTTTCAATTTTCTGGT+GGG + chr1_1:11687119-11687138 Msa0008080:intron 30.0%
! TGAAAACTAGAACTCTAGAA+GGG - chr1_1:11687152-11687171 None:intergenic 30.0%
ATGAAAACTAGAACTCTAGA+AGG - chr1_1:11687153-11687172 None:intergenic 30.0%
TTCTTTGTATGGACAATTAC+AGG + chr1_1:11687496-11687515 Msa0008080:intron 30.0%
! GAGGTTAATATTCTTTTGGA+AGG + chr1_1:11687694-11687713 Msa0008080:CDS 30.0%
!! TTCTTTTGGAAGGATTTGAA+AGG + chr1_1:11687704-11687723 Msa0008080:CDS 30.0%
TAATTGCAGTACTGTATACA+AGG + chr1_1:11687732-11687751 Msa0008080:CDS 30.0%
TCTTACAAACTCTAGTATAC+TGG + chr1_1:11687763-11687782 Msa0008080:intron 30.0%
CTTACAAACTCTAGTATACT+GGG + chr1_1:11687764-11687783 Msa0008080:intron 30.0%
ACTTGGAGAAACATATATGT+AGG + chr1_1:11687812-11687831 Msa0008080:intron 30.0%
CTTGGAGAAACATATATGTA+GGG + chr1_1:11687813-11687832 Msa0008080:intron 30.0%
AAAGGAAAAATTGATCTTGG+TGG + chr1_1:11687937-11687956 Msa0008080:CDS 30.0%
AAAATGTTACACAGTGATGT+AGG + chr1_1:11688129-11688148 Msa0008080:intron 30.0%
!! GTTAAATTTGTTAGAGGTTG+TGG + chr1_1:11688151-11688170 Msa0008080:intron 30.0%
CATCTAATCTGTTTGATTCA+TGG + chr1_1:11688251-11688270 Msa0008080:intron 30.0%
! TTTGAAATTGTCAATGCTGA+TGG + chr1_1:11688510-11688529 Msa0008080:CDS 30.0%
ATTAAGACAAAGTCAGAATG+AGG - chr1_1:11689235-11689254 None:intergenic 30.0%
TGCAGCAAAAAAATCAAATG+AGG - chr1_1:11689341-11689360 None:intergenic 30.0%
TCCATTCAATGAACAATATC+AGG - chr1_1:11689547-11689566 None:intergenic 30.0%
AAACCACAAAACATGTCATT+GGG - chr1_1:11689759-11689778 None:intergenic 30.0%
CACTTCTTGGAAGATATAAT+TGG + chr1_1:11689944-11689963 Msa0008080:CDS 30.0%
CTTCTTGGAAGATATAATTG+GGG + chr1_1:11689946-11689965 Msa0008080:CDS 30.0%
!!! GATTGTTTAGAGTTTTTGGT+CGG - chr1_1:11690047-11690066 None:intergenic 30.0%
ATTTGTGGAGGTAACTAATA+TGG - chr1_1:11690259-11690278 None:intergenic 30.0%
GTTAGTAAATGAGTGATACA+GGG - chr1_1:11690290-11690309 None:intergenic 30.0%
TGTTAGTAAATGAGTGATAC+AGG - chr1_1:11690291-11690310 None:intergenic 30.0%
GTAAAACAATGAATCTTCTG+AGG + chr1_1:11690311-11690330 Msa0008080:intron 30.0%
! AAGCAAACGTTTTCATGTTA+TGG + chr1_1:11690530-11690549 Msa0008080:CDS 30.0%
! AGCAAACGTTTTCATGTTAT+GGG + chr1_1:11690531-11690550 Msa0008080:CDS 30.0%
! CTATTTGATAACTTTGGATC+GGG - chr1_1:11690790-11690809 None:intergenic 30.0%
! CCTATTTGATAACTTTGGAT+CGG - chr1_1:11690791-11690810 None:intergenic 30.0%
! GTTCTCCTATTTGATAACTT+TGG - chr1_1:11690796-11690815 None:intergenic 30.0%
CTTGAAAAGGCTAAATAGAA+CGG - chr1_1:11690914-11690933 None:intergenic 30.0%
!!! TCTTGCTTGTTTTGTAAACA+TGG - chr1_1:11690191-11690210 None:intergenic 30.0%
GCTATTGAATGTATAGAGAA+TGG + chr1_1:11690973-11690992 Msa0008080:CDS 30.0%
ATCTAATGAACTCATGTGTT+TGG + chr1_1:11691136-11691155 Msa0008080:intron 30.0%
TCTAATGAACTCATGTGTTT+GGG + chr1_1:11691137-11691156 Msa0008080:intron 30.0%
! GTGTATTAATTCTTTTGCAG+TGG - chr1_1:11691245-11691264 None:intergenic 30.0%
TTAATACACACACATTGACA+AGG + chr1_1:11691256-11691275 Msa0008080:intron 30.0%
! CTTGCATATATTTTCCTTGT+GGG + chr1_1:11691655-11691674 Msa0008080:CDS 30.0%
!!! ACTTTTCGTTTTTTAGGAGG+GGG - chr1_1:11669594-11669613 None:intergenic 35.0%
!!! CACTTTTCGTTTTTTAGGAG+GGG - chr1_1:11669595-11669614 None:intergenic 35.0%
! TTCTTGGTTTAGTTCGAAGT+AGG + chr1_1:11669763-11669782 Msa0008080:CDS 35.0%
TGCCAATGATAACAAGATCA+AGG + chr1_1:11669869-11669888 Msa0008080:CDS 35.0%
CGTAGAATATGACACTTGTT+AGG - chr1_1:11669921-11669940 None:intergenic 35.0%
ATTCTAACCTCAAACTTGAC+AGG - chr1_1:11670328-11670347 None:intergenic 35.0%
GTGTATAATCCGATTAAAGG+GGG - chr1_1:11670373-11670392 None:intergenic 35.0%
ATTATACACATTCGGGACAT+GGG + chr1_1:11670384-11670403 Msa0008080:intron 35.0%
TTTGGACTGTTGATCAAGAT+CGG + chr1_1:11670481-11670500 Msa0008080:intron 35.0%
AGAGATTATGTGACCAAGAA+AGG - chr1_1:11670694-11670713 None:intergenic 35.0%
TATTGGTGCGAAGAATTTAC+CGG + chr1_1:11670916-11670935 Msa0008080:intron 35.0%
AGTATTAAGTTTGAGCCTAG+TGG - chr1_1:11670972-11670991 None:intergenic 35.0%
CAGTTGGACAAATGTAATGT+TGG + chr1_1:11671011-11671030 Msa0008080:intron 35.0%
! TGTAATGTTGGTAAACGACT+TGG + chr1_1:11671023-11671042 Msa0008080:intron 35.0%
! TGTCTGAAATGCAGAATATG+TGG + chr1_1:11671198-11671217 Msa0008080:intron 35.0%
! GTCTGAAATGCAGAATATGT+GGG + chr1_1:11671199-11671218 Msa0008080:intron 35.0%
AAGATAACAGGAAGCTAATC+GGG + chr1_1:11671423-11671442 Msa0008080:CDS 35.0%
TGGTATCAGATTGATGTCAT+AGG - chr1_1:11671455-11671474 None:intergenic 35.0%
ATCATCTGAGAAAAGAGTTG+AGG + chr1_1:11671487-11671506 Msa0008080:intron 35.0%
CTATGAATTTCCTCAAGAGT+TGG - chr1_1:11671721-11671740 None:intergenic 35.0%
! TGAGGAAATTCATAGCTTGT+TGG + chr1_1:11671726-11671745 Msa0008080:intron 35.0%
!! GTCTATTGTTTTTCCTTGGT+TGG + chr1_1:11671902-11671921 Msa0008080:intron 35.0%
! CAAGTGGTAATTGATTTCAC+CGG - chr1_1:11671937-11671956 None:intergenic 35.0%
! AGATAGCTACCATTTTACGA+TGG - chr1_1:11672057-11672076 None:intergenic 35.0%
ACATATTCTGATAGCAACCA+AGG - chr1_1:11672276-11672295 None:intergenic 35.0%
GCTAGCAATGTTTAAACACT+GGG - chr1_1:11672600-11672619 None:intergenic 35.0%
!!! TGATTTTGATTGTCGGTGAA+GGG - chr1_1:11672830-11672849 None:intergenic 35.0%
!!! TAGCCTGTGATTTTGATTGT+CGG - chr1_1:11672837-11672856 None:intergenic 35.0%
CAATCAAAATCACAGGCTAT+TGG + chr1_1:11672838-11672857 Msa0008080:CDS 35.0%
AAGAATACCATTAGGTATGG+CGG - chr1_1:11672871-11672890 None:intergenic 35.0%
CTATGTTCAACGATGATTGA+AGG - chr1_1:11672913-11672932 None:intergenic 35.0%
CACCAAGATATGATTTATGC+AGG - chr1_1:11673073-11673092 None:intergenic 35.0%
! TTTGGAATGTTTGGATATGG+GGG + chr1_1:11673212-11673231 Msa0008080:CDS 35.0%
AATCTAACTCTGAATCCACA+TGG + chr1_1:11673451-11673470 Msa0008080:CDS 35.0%
AAACATGAATACCTTCCATG+TGG - chr1_1:11673469-11673488 None:intergenic 35.0%
TTTAGACATATGGTGGCATA+AGG + chr1_1:11673568-11673587 Msa0008080:intron 35.0%
TTAGACATATGGTGGCATAA+GGG + chr1_1:11673569-11673588 Msa0008080:intron 35.0%
ACAGACAAGAGAACAAGAAT+AGG - chr1_1:11673666-11673685 None:intergenic 35.0%
CATTAAATTTCTTCCTCTCC+TGG - chr1_1:11673704-11673723 None:intergenic 35.0%
CAGGAGAGGAAGAAATTTAA+TGG + chr1_1:11673702-11673721 Msa0008080:intron 35.0%
GAGAGGAAGAAATTTAATGG+AGG + chr1_1:11673705-11673724 Msa0008080:intron 35.0%
GAAGAAATTTAATGGAGGGA+AGG + chr1_1:11673710-11673729 Msa0008080:intron 35.0%
CCACTTCAACCATATCATAT+AGG - chr1_1:11673762-11673781 None:intergenic 35.0%
CCTATATGATATGGTTGAAG+TGG + chr1_1:11673759-11673778 Msa0008080:intron 35.0%
ATATGATATGGTTGAAGTGG+AGG + chr1_1:11673762-11673781 Msa0008080:intron 35.0%
TATGATATGGTTGAAGTGGA+GGG + chr1_1:11673763-11673782 Msa0008080:intron 35.0%
GTAGTTGTAGTAAGAAAGAG+TGG + chr1_1:11674379-11674398 Msa0008080:intron 35.0%
AGAGTGGGATAACATAGTTA+AGG + chr1_1:11674395-11674414 Msa0008080:intron 35.0%
ATGTTCAAACCTGAATGTAG+GGG - chr1_1:11674529-11674548 None:intergenic 35.0%
CATGTTCAAACCTGAATGTA+GGG - chr1_1:11674530-11674549 None:intergenic 35.0%
ATGCCAGTGAATTGAATCAA+TGG + chr1_1:11674547-11674566 Msa0008080:intron 35.0%
!! GTTCCATTGATTCAATTCAC+TGG - chr1_1:11674553-11674572 None:intergenic 35.0%
! AATGATGACTTGTCTGACAA+AGG + chr1_1:11674735-11674754 Msa0008080:CDS 35.0%
! ATGATGACTTGTCTGACAAA+GGG + chr1_1:11674736-11674755 Msa0008080:CDS 35.0%
GAAAGGACCTGAAATTCAAT+TGG - chr1_1:11674774-11674793 None:intergenic 35.0%
AAAAACAATGATGTGGCAGA+AGG - chr1_1:11675059-11675078 None:intergenic 35.0%
! ACATACGTCCTTTAAGTTTG+AGG - chr1_1:11675181-11675200 None:intergenic 35.0%
GTTTGACACAGTAAAACTCA+AGG - chr1_1:11675442-11675461 None:intergenic 35.0%
! ATATGGTTTTCCATGACATC+AGG - chr1_1:11675712-11675731 None:intergenic 35.0%
!! TTGGTTCTTTTGCAGATCAA+CGG + chr1_1:11675764-11675783 Msa0008080:intron 35.0%
GTTAATCTAACAGAGATTCG+AGG + chr1_1:11675788-11675807 Msa0008080:CDS 35.0%
ATTGCAAGAATGCAAATTGG+TGG - chr1_1:11675828-11675847 None:intergenic 35.0%
ACCAATTTGCATTCTTGCAA+TGG + chr1_1:11675827-11675846 Msa0008080:CDS 35.0%
ACCATTGCAAGAATGCAAAT+TGG - chr1_1:11675831-11675850 None:intergenic 35.0%
TGAATCTGCAGAACAAATTC+AGG - chr1_1:11675854-11675873 None:intergenic 35.0%
GTATTGGACTTTGTCTATCT+TGG + chr1_1:11676148-11676167 Msa0008080:intron 35.0%
!!! GGAGAGTATTGAGAGAATTT+TGG + chr1_1:11676224-11676243 Msa0008080:CDS 35.0%
! TTGGAAACTTTGAAGGATGA+CGG + chr1_1:11676243-11676262 Msa0008080:CDS 35.0%
CAAGTGCATGTTTGGTATTA+CGG + chr1_1:11676592-11676611 Msa0008080:intron 35.0%
!!! GGTTTTTCTTTGGGGTTTTT+TGG - chr1_1:11676773-11676792 None:intergenic 35.0%
! CTGACGAGTTACAATTCTTT+TGG + chr1_1:11677253-11677272 Msa0008080:intron 35.0%
! TCCTTCCTTTTATGGACTTA+AGG + chr1_1:11677285-11677304 Msa0008080:CDS 35.0%
TCCTTAAGTCCATAAAAGGA+AGG - chr1_1:11677289-11677308 None:intergenic 35.0%
TATTGAAGAGATGTTCGTTG+AGG + chr1_1:11677339-11677358 Msa0008080:CDS 35.0%
ATTGAAGAGATGTTCGTTGA+GGG + chr1_1:11677340-11677359 Msa0008080:CDS 35.0%
TTGAGGGTAAAATGCTATGT+CGG + chr1_1:11677356-11677375 Msa0008080:CDS 35.0%
TAAATTGCAGAAACTGATGC+CGG + chr1_1:11677453-11677472 Msa0008080:intron 35.0%
! TTTTAAGCCTACACAGTCAA+AGG + chr1_1:11677476-11677495 Msa0008080:CDS 35.0%
TTGAATGCTTGATTCATGTG+AGG + chr1_1:11677858-11677877 Msa0008080:intron 35.0%
TGATCTTCTTACTAAGCCTT+TGG - chr1_1:11677979-11677998 None:intergenic 35.0%
TGATCTTCTTACTAAGCCTT+TGG - chr1_1:11677979-11677998 None:intergenic 35.0%
! TTTGGAGTGAATGATTCGAT+TGG + chr1_1:11678133-11678152 Msa0008080:intron 35.0%
TTGCTACTATGTGACAATGT+CGG - chr1_1:11678176-11678195 None:intergenic 35.0%
ACATTGTCACATAGTAGCAA+TGG + chr1_1:11678176-11678195 Msa0008080:intron 35.0%
TTAGTGATAACCAAGAGATG+TGG + chr1_1:11678319-11678338 Msa0008080:intron 35.0%
TTGAAAGTAACCACATCTCT+TGG - chr1_1:11678332-11678351 None:intergenic 35.0%
GCATAAATATGGAAGGATGA+TGG + chr1_1:11678420-11678439 Msa0008080:intron 35.0%
GAGACTACTTCGTTATCTAA+AGG - chr1_1:11678478-11678497 None:intergenic 35.0%
!! GAATTGAGAAAGCTTGTTGA+TGG + chr1_1:11678536-11678555 Msa0008080:intron 35.0%
ATCAACATAGACCAAGAAGT+AGG + chr1_1:11678895-11678914 Msa0008080:intron 35.0%
ACCAAGAAGTAGGTAATGAT+TGG + chr1_1:11678905-11678924 Msa0008080:intron 35.0%
TCCAATCATTACCTACTTCT+TGG - chr1_1:11678909-11678928 None:intergenic 35.0%
ACCTGAGGCATATATAAACA+GGG + chr1_1:11678928-11678947 Msa0008080:intron 35.0%
AAAGCTTTCATAACATCCCA+TGG - chr1_1:11678980-11678999 None:intergenic 35.0%
TATTGTATATCTCTGAGTCC+TGG + chr1_1:11679076-11679095 Msa0008080:intron 35.0%
ATTTCTTCAAGGATCACTCA+AGG - chr1_1:11679125-11679144 None:intergenic 35.0%
GTAAACAGTGCATTTCTTCA+AGG - chr1_1:11679136-11679155 None:intergenic 35.0%
CTAATTCTCACTATTGCCTT+GGG - chr1_1:11679187-11679206 None:intergenic 35.0%
ACTAATTCTCACTATTGCCT+TGG - chr1_1:11679188-11679207 None:intergenic 35.0%
CGTATCAAGAGAAATCATGA+TGG - chr1_1:11679319-11679338 None:intergenic 35.0%
ATATGATGATTCACTAGTGG+TGG + chr1_1:11679361-11679380 Msa0008080:intron 35.0%
CCTTAATTCGAAATGGTACA+TGG - chr1_1:11679396-11679415 None:intergenic 35.0%
CCATGTACCATTTCGAATTA+AGG + chr1_1:11679393-11679412 Msa0008080:intron 35.0%
CTCAATGCCTTAATTCGAAA+TGG - chr1_1:11679403-11679422 None:intergenic 35.0%
!! AATTAAGGCATTGAGCTCTT+CGG + chr1_1:11679408-11679427 Msa0008080:intron 35.0%
ATTGTTTCCTCTTGAAGTGT+TGG + chr1_1:11679581-11679600 Msa0008080:intron 35.0%
! TTGTTTCCTCTTGAAGTGTT+GGG + chr1_1:11679582-11679601 Msa0008080:intron 35.0%
GTTGGGAGTAACAATATGAT+TGG + chr1_1:11679599-11679618 Msa0008080:intron 35.0%
TTAAGAGGTAGGATAGTATG+TGG + chr1_1:11679776-11679795 Msa0008080:intron 35.0%
GGCGAGATGTGTAAATTTAT+TGG + chr1_1:11679890-11679909 Msa0008080:intron 35.0%
! ATTCGTCATCTTCACTCTTT+TGG - chr1_1:11680038-11680057 None:intergenic 35.0%
GAAGATGACGAATGTTTGTT+TGG + chr1_1:11680045-11680064 Msa0008080:intron 35.0%
!! GAATGTTTGTTTGGTGATGA+AGG + chr1_1:11680054-11680073 Msa0008080:intron 35.0%
! TGGTAGTCTGTTGATTAAGT+AGG + chr1_1:11680112-11680131 Msa0008080:intron 35.0%
! TCATTTTGCATTCATCACAG+GGG - chr1_1:11680138-11680157 None:intergenic 35.0%
!! GTCATTTTGCATTCATCACA+GGG - chr1_1:11680139-11680158 None:intergenic 35.0%
CAAAATGACCATAGTTGAGA+TGG + chr1_1:11680150-11680169 Msa0008080:intron 35.0%
GCAGGTTGCATAATTTAGTA+GGG + chr1_1:11680172-11680191 Msa0008080:intron 35.0%
TATACCATTAGAGGAGAGAT+AGG + chr1_1:11680280-11680299 Msa0008080:intron 35.0%
AAATCCTATCTCTCCTCTAA+TGG - chr1_1:11680287-11680306 None:intergenic 35.0%
TCTATATTCTGACAATGGTG+GGG - chr1_1:11680324-11680343 None:intergenic 35.0%
CTCTATATTCTGACAATGGT+GGG - chr1_1:11680325-11680344 None:intergenic 35.0%
TCTCTATATTCTGACAATGG+TGG - chr1_1:11680326-11680345 None:intergenic 35.0%
ATATTACGTTGTTGGGAGAA+CGG - chr1_1:11680818-11680837 None:intergenic 35.0%
TAATCAGAGTAGACCAACAA+CGG + chr1_1:11680847-11680866 Msa0008080:intron 35.0%
AATATCTCCAAAACATGCAG+CGG + chr1_1:11680935-11680954 Msa0008080:intron 35.0%
TCCAACGTCAATGAAAATCT+TGG + chr1_1:11680991-11681010 Msa0008080:intron 35.0%
CTCTGATACATATTAGGATG+GGG - chr1_1:11681136-11681155 None:intergenic 35.0%
GCTCTGATACATATTAGGAT+GGG - chr1_1:11681137-11681156 None:intergenic 35.0%
AGACAACTTCATTATGCATG+TGG + chr1_1:11681499-11681518 Msa0008080:intron 35.0%
CAACACAACTCTAAATGCAA+TGG + chr1_1:11681676-11681695 Msa0008080:intron 35.0%
TATCGTCTAATGTCGAAGTT+GGG - chr1_1:11681784-11681803 None:intergenic 35.0%
!! AGGATGTTTTGAACTTTGAG+AGG - chr1_1:11681864-11681883 None:intergenic 35.0%
!! TGAGGTGTTTTATGGGTATT+TGG - chr1_1:11681923-11681942 None:intergenic 35.0%
! CTAACACTTAAGTTTGAAGC+TGG + chr1_1:11681952-11681971 Msa0008080:intron 35.0%
! GGAAACCAACCATAAGTTTT+TGG + chr1_1:11681974-11681993 Msa0008080:intron 35.0%
!! AGTTAGCTTTCTAATGGCTT+TGG - chr1_1:11682104-11682123 None:intergenic 35.0%
!! CTAAATCATTTTGGGGGTTT+GGG - chr1_1:11682406-11682425 None:intergenic 35.0%
!! TCTAAATCATTTTGGGGGTT+TGG - chr1_1:11682407-11682426 None:intergenic 35.0%
! GAATTGTTGTTCTTGAGGTT+AGG - chr1_1:11682526-11682545 None:intergenic 35.0%
! TTGGTGAATTGTTGTTCTTG+AGG - chr1_1:11682531-11682550 None:intergenic 35.0%
! AACTAATCTAAGGTAAGGGT+GGG - chr1_1:11682590-11682609 None:intergenic 35.0%
! AAACTAATCTAAGGTAAGGG+TGG - chr1_1:11682591-11682610 None:intergenic 35.0%
ATGCGTATAACTGAGAAAAG+AGG - chr1_1:11682678-11682697 None:intergenic 35.0%
TGCTGCAAAGTAGAAACAAT+GGG + chr1_1:11683014-11683033 Msa0008080:intron 35.0%
AAGCAATGGTAAAAGGATTC+TGG - chr1_1:11683206-11683225 None:intergenic 35.0%
!! TACCATTGCTTTGAAGAACT+TGG + chr1_1:11683215-11683234 Msa0008080:CDS 35.0%
!! ACCATTGCTTTGAAGAACTT+GGG + chr1_1:11683216-11683235 Msa0008080:CDS 35.0%
TGTTTCCGTCAAAATTAGCA+CGG + chr1_1:11683362-11683381 Msa0008080:CDS 35.0%
ACACACTTTCATACCAACAA+AGG + chr1_1:11683629-11683648 Msa0008080:intron 35.0%
GTGAAGTCATTAGAGTTCAT+CGG + chr1_1:11683825-11683844 Msa0008080:intron 35.0%
TGAAGTCATTAGAGTTCATC+GGG + chr1_1:11683826-11683845 Msa0008080:intron 35.0%
TTACTTTATGCGCTACATTC+AGG - chr1_1:11684001-11684020 None:intergenic 35.0%
! TGTGCTTTGCTTGATTTTAC+AGG + chr1_1:11684568-11684587 Msa0008080:intron 35.0%
CAAAGAGCTACTGATATTCA+AGG - chr1_1:11684655-11684674 None:intergenic 35.0%
TGAGTCTAATTTCTATGCAC+TGG + chr1_1:11684942-11684961 Msa0008080:intron 35.0%
! CTTTGATGATACTATGTCCT+TGG - chr1_1:11685102-11685121 None:intergenic 35.0%
! TGGTAATTTTATCTGCTAGG+TGG + chr1_1:11685776-11685795 Msa0008080:intron 35.0%
TGAAACGTATTCATTGTGCT+TGG + chr1_1:11685835-11685854 Msa0008080:CDS 35.0%
AATGATTTACTGTACAGGGT+TGG + chr1_1:11686042-11686061 Msa0008080:intron 35.0%
ATGGATGTCATAACATGCAA+TGG - chr1_1:11686088-11686107 None:intergenic 35.0%
GACTTGTATTTCAAAGTGCA+TGG + chr1_1:11686171-11686190 Msa0008080:CDS 35.0%
GTAGTGAATTGGACAAGATA+AGG + chr1_1:11686336-11686355 Msa0008080:CDS 35.0%
CACGGAAAAGATACTGAAAA+CGG - chr1_1:11686404-11686423 None:intergenic 35.0%
TTAGCATATTCGAGATAACC+AGG - chr1_1:11686533-11686552 None:intergenic 35.0%
AACTCCTTGAAAATGAAACC+CGG - chr1_1:11686590-11686609 None:intergenic 35.0%
GACTGTGTTCATTCACTTAT+GGG + chr1_1:11686728-11686747 Msa0008080:intron 35.0%
GATCCAATCAAATGTGTAGA+TGG + chr1_1:11686962-11686981 Msa0008080:intron 35.0%
TCACCATCTACACATTTGAT+TGG - chr1_1:11686968-11686987 None:intergenic 35.0%
!!! GCTTTGTTTCAATTTTCTGG+TGG + chr1_1:11687118-11687137 Msa0008080:intron 35.0%
! GAAAACTAGAACTCTAGAAG+GGG - chr1_1:11687151-11687170 None:intergenic 35.0%
TCATCACACAAATGTTCACT+TGG + chr1_1:11687169-11687188 Msa0008080:intron 35.0%
TATAGAAACCATGTGTCTGA+AGG + chr1_1:11687667-11687686 Msa0008080:CDS 35.0%
! CGTGGAGGTTAATATTCTTT+TGG + chr1_1:11687690-11687709 Msa0008080:CDS 35.0%
! TTTGCATTGATGGTTGTACT+TGG + chr1_1:11687795-11687814 Msa0008080:intron 35.0%
GATCTACAGGTAGATGATAA+AGG + chr1_1:11687919-11687938 Msa0008080:intron 35.0%
! CTAAAGTTAACAGCAGGTTT+TGG + chr1_1:11687964-11687983 Msa0008080:CDS 35.0%
TCCATATCTGTTATGTTCGA+AGG + chr1_1:11688281-11688300 Msa0008080:CDS 35.0%
ACCTTCGAACATAACAGATA+TGG - chr1_1:11688285-11688304 None:intergenic 35.0%
TCGAAGGTAAACCAAAATTC+AGG + chr1_1:11688297-11688316 Msa0008080:CDS 35.0%
GCTGTATTGTGTTCAATTTC+AGG + chr1_1:11688443-11688462 Msa0008080:intron 35.0%
TCGATTCATCTGCATTAGAA+AGG - chr1_1:11688605-11688624 None:intergenic 35.0%
CTAATGCAGATGAATCGATA+CGG + chr1_1:11688607-11688626 Msa0008080:CDS 35.0%
! ATACGGTACACTTTTAAGCA+TGG + chr1_1:11688624-11688643 Msa0008080:CDS 35.0%
!! ATTTCTGGAACACGAATAGA+TGG - chr1_1:11688663-11688682 None:intergenic 35.0%
TATTCGTGTTCCAGAAATTG+AGG + chr1_1:11688665-11688684 Msa0008080:CDS 35.0%
ATTCGTGTTCCAGAAATTGA+GGG + chr1_1:11688666-11688685 Msa0008080:CDS 35.0%
ATGAGAAGCTTCAAAGCAAA+AGG - chr1_1:11688694-11688713 None:intergenic 35.0%
AATTGGTTAGATTTGTCTGC+AGG + chr1_1:11688796-11688815 Msa0008080:intron 35.0%
!! AAGAGTTGATAGTTCCTTCA+GGG - chr1_1:11688891-11688910 None:intergenic 35.0%
!! TAAGAGTTGATAGTTCCTTC+AGG - chr1_1:11688892-11688911 None:intergenic 35.0%
GCCTGATATTGTTCATTGAA+TGG + chr1_1:11689543-11689562 Msa0008080:intron 35.0%
GGTAATTGCTAAAACATCGT+AGG - chr1_1:11689596-11689615 None:intergenic 35.0%
! GTTTGTTTGGAGTATAATGG+AGG + chr1_1:11689706-11689725 Msa0008080:intron 35.0%
!!! AGGCAATGAGGTTTTAACTT+AGG + chr1_1:11689726-11689745 Msa0008080:intron 35.0%
CAAAACATGTCATTGGGTTT+GGG - chr1_1:11689753-11689772 None:intergenic 35.0%
ACAAAACATGTCATTGGGTT+TGG - chr1_1:11689754-11689773 None:intergenic 35.0%
! AAACCCAATGACATGTTTTG+TGG + chr1_1:11689753-11689772 Msa0008080:intron 35.0%
CAAACCACAAAACATGTCAT+TGG - chr1_1:11689760-11689779 None:intergenic 35.0%
TGTAGTCATTTCTTCTTTGG+TGG - chr1_1:11689852-11689871 None:intergenic 35.0%
AAAGCAACAGAATCACTTCT+TGG + chr1_1:11689931-11689950 Msa0008080:CDS 35.0%
AGAATGTTAGCGGAATATCT+TGG + chr1_1:11690372-11690391 Msa0008080:intron 35.0%
!! GGGTGTTATTTGTAGATCTT+TGG + chr1_1:11690410-11690429 Msa0008080:CDS 35.0%
ATAAGGTAATGTGGAGTTTC+AGG + chr1_1:11690564-11690583 Msa0008080:intron 35.0%
TAAGGTAATGTGGAGTTTCA+GGG + chr1_1:11690565-11690584 Msa0008080:intron 35.0%
CAAACAATGCTTCATTTGAC+AGG + chr1_1:11690716-11690735 Msa0008080:intron 35.0%
! TTTTGCAAGTTCCCATCATA+TGG - chr1_1:11690742-11690761 None:intergenic 35.0%
CCGATCCAAAGTTATCAAAT+AGG + chr1_1:11690788-11690807 Msa0008080:CDS 35.0%
AAACATGGAGCTTCTTGAAA+AGG - chr1_1:11690927-11690946 None:intergenic 35.0%
! CAAAACAAGCAAGAGTATGA+TGG + chr1_1:11690948-11690967 Msa0008080:CDS 35.0%
!! AATGGTGCTGTATCATTAGA+TGG + chr1_1:11690991-11691010 Msa0008080:CDS 35.0%
GAAAATGGAACTCTTTCTCT+TGG + chr1_1:11691027-11691046 Msa0008080:CDS 35.0%
TCACAGACAGAAAAGAGAAA+AGG - chr1_1:11691067-11691086 None:intergenic 35.0%
!!! TGGTTATTTTCGGGTATAGA+AGG + chr1_1:11691425-11691444 Msa0008080:intron 35.0%
CCACAAGGAAAATATATGCA+AGG - chr1_1:11691657-11691676 None:intergenic 35.0%
! CCTTGCATATATTTTCCTTG+TGG + chr1_1:11691654-11691673 Msa0008080:CDS 35.0%
CTACTGAAGATTGAAAAAGG+TGG + chr1_1:11691744-11691763 Msa0008080:CDS 35.0%
TTGGAACAAAATCCAGAGAT+TGG + chr1_1:11691873-11691892 Msa0008080:CDS 35.0%
TGGAACAAAATCCAGAGATT+GGG + chr1_1:11691874-11691893 Msa0008080:CDS 35.0%
ATGATGACAACCAACAACGA+TGG + chr1_1:11669618-11669637 Msa0008080:CDS 40.0%
AGTTCCACAATTGCTGCATT+CGG - chr1_1:11669699-11669718 None:intergenic 40.0%
! ATGCTGTTTGGGGAATTTCT+TGG + chr1_1:11669747-11669766 Msa0008080:CDS 40.0%
AGAATCAAATATGGCCACTC+TGG - chr1_1:11669999-11670018 None:intergenic 40.0%
GTCAATCAGGGGATTAACAA+AGG + chr1_1:11670301-11670320 Msa0008080:intron 40.0%
ATAATCCGATTAAAGGGGGA+GGG - chr1_1:11670369-11670388 None:intergenic 40.0%
TATAATCCGATTAAAGGGGG+AGG - chr1_1:11670370-11670389 None:intergenic 40.0%
GATTATACACATTCGGGACA+TGG + chr1_1:11670383-11670402 Msa0008080:intron 40.0%
ATTGGTGCGAAGAATTTACC+GGG + chr1_1:11670917-11670936 Msa0008080:intron 40.0%
TGGATGGAAAAAATGTGGTC+GGG - chr1_1:11670952-11670971 None:intergenic 40.0%
GTGGATGGAAAAAATGTGGT+CGG - chr1_1:11670953-11670972 None:intergenic 40.0%
! CCTAGTGGATGGAAAAAATG+TGG - chr1_1:11670957-11670976 None:intergenic 40.0%
!!! CCACATTTTTTCCATCCACT+AGG + chr1_1:11670954-11670973 Msa0008080:intron 40.0%
TTAAGTTTGAGCCTAGTGGA+TGG - chr1_1:11670968-11670987 None:intergenic 40.0%
!! CTTAAGGTATCGAGTTCAGT+TGG + chr1_1:11670995-11671014 Msa0008080:intron 40.0%
! GGTAAACGACTTGGAGTATT+TGG + chr1_1:11671032-11671051 Msa0008080:intron 40.0%
ACCAGATACAGATCTGCTAA+TGG + chr1_1:11671229-11671248 Msa0008080:CDS 40.0%
TCCATTAGCAGATCTGTATC+TGG - chr1_1:11671233-11671252 None:intergenic 40.0%
ATAATGCTTTGCAAGCTGTG+TGG + chr1_1:11671390-11671409 Msa0008080:CDS 40.0%
!! CCTTGGTTGGTTTCTTATAC+CGG + chr1_1:11671915-11671934 Msa0008080:intron 40.0%
! ACAATTTTTGACAGTGGGTC+TGG + chr1_1:11672008-11672027 Msa0008080:CDS 40.0%
!! ATTCTAGATAAGTTGGTCGG+TGG + chr1_1:11672206-11672225 Msa0008080:intron 40.0%
!! TGTTGATGGCCAAAGAGATT+CGG + chr1_1:11672346-11672365 Msa0008080:intron 40.0%
GCCAAAGAGATTCGGAATTA+GGG + chr1_1:11672354-11672373 Msa0008080:intron 40.0%
ACCCTAATTCCGAATCTCTT+TGG - chr1_1:11672358-11672377 None:intergenic 40.0%
GGCTAGCAATGTTTAAACAC+TGG - chr1_1:11672601-11672620 None:intergenic 40.0%
GACTTCTTATCTCTTGTGCA+GGG + chr1_1:11672789-11672808 Msa0008080:intron 40.0%
ACTTCTTATCTCTTGTGCAG+GGG + chr1_1:11672790-11672809 Msa0008080:intron 40.0%
!!! GTGATTTTGATTGTCGGTGA+AGG - chr1_1:11672831-11672850 None:intergenic 40.0%
TCACCGACAATCAAAATCAC+AGG + chr1_1:11672831-11672850 Msa0008080:CDS 40.0%
TCAAAATCACAGGCTATTGG+AGG + chr1_1:11672841-11672860 Msa0008080:CDS 40.0%
ACGATGATTGAAGGGTGAAA+AGG - chr1_1:11672904-11672923 None:intergenic 40.0%
!!! CAGCCTTGTTTTGGAATGTT+TGG + chr1_1:11673203-11673222 Msa0008080:intron 40.0%
ACCTATAGCATCTATGCATC+TGG + chr1_1:11673235-11673254 Msa0008080:CDS 40.0%
CCTATAGCATCTATGCATCT+GGG + chr1_1:11673236-11673255 Msa0008080:CDS 40.0%
CTATAGCATCTATGCATCTG+GGG + chr1_1:11673237-11673256 Msa0008080:CDS 40.0%
CTTTGTCTTGGAAGAAACAC+GGG - chr1_1:11673376-11673395 None:intergenic 40.0%
GCTTTGTCTTGGAAGAAACA+CGG - chr1_1:11673377-11673396 None:intergenic 40.0%
TAACTCTGAATCCACATGGA+AGG + chr1_1:11673455-11673474 Msa0008080:CDS 40.0%
! TTCTAGAGGCAGCTTTACAA+AGG + chr1_1:11673617-11673636 Msa0008080:CDS 40.0%
! CTTGTCTGTTTTCAGCATTG+TGG + chr1_1:11673677-11673696 Msa0008080:intron 40.0%
ATGATATGGTTGAAGTGGAG+GGG + chr1_1:11673764-11673783 Msa0008080:intron 40.0%
! CAACCCTTTTCAGCTCTTTT+GGG - chr1_1:11674252-11674271 None:intergenic 40.0%
! ACAACCCTTTTCAGCTCTTT+TGG - chr1_1:11674253-11674272 None:intergenic 40.0%
CATATACTTCCCCTACATTC+AGG + chr1_1:11674517-11674536 Msa0008080:CDS 40.0%
GCATGTTCAAACCTGAATGT+AGG - chr1_1:11674531-11674550 None:intergenic 40.0%
TAAGGTGTATCAGTGGAGAA+AGG - chr1_1:11674791-11674810 None:intergenic 40.0%
AGCTAGTTAAGGTGTATCAG+TGG - chr1_1:11674798-11674817 None:intergenic 40.0%
TATCCTCGATGAGCTAGTTA+AGG - chr1_1:11674809-11674828 None:intergenic 40.0%
CTTCAAACTTAAAGGACCCA+TGG - chr1_1:11674899-11674918 None:intergenic 40.0%
! CTAGGGGTTCTTTAAGTTTG+AGG - chr1_1:11675241-11675260 None:intergenic 40.0%
CTAATTTCTGATCTTGGCAG+AGG + chr1_1:11675401-11675420 Msa0008080:intron 40.0%
GACATCAGGTAACTCTTTCA+TGG - chr1_1:11675698-11675717 None:intergenic 40.0%
GAAAGAGTTACCTGATGTCA+TGG + chr1_1:11675699-11675718 Msa0008080:intron 40.0%
AATCTAACAGAGATTCGAGG+CGG + chr1_1:11675791-11675810 Msa0008080:CDS 40.0%
! TTTGTCTTGTGCTTTGGTTC+TGG + chr1_1:11676386-11676405 Msa0008080:intron 40.0%
TTAAGGACCAAGTGCATGTT+TGG + chr1_1:11676584-11676603 Msa0008080:intron 40.0%
CGTAATACCAAACATGCACT+TGG - chr1_1:11676594-11676613 None:intergenic 40.0%
! GGAATTGTTGTTAGGGGATT+CGG - chr1_1:11676814-11676833 None:intergenic 40.0%
AACTCGTCAGCAATCTCTAA+AGG - chr1_1:11677243-11677262 None:intergenic 40.0%
! TCAGGCTTTCCTTCCTTTTA+TGG + chr1_1:11677277-11677296 Msa0008080:intron 40.0%
TGACTGTGTAGGCTTAAAAC+CGG - chr1_1:11677475-11677494 None:intergenic 40.0%
AGTCTAACCTTTGACTGTGT+AGG - chr1_1:11677486-11677505 None:intergenic 40.0%
CATCTGCTGTACACAATGAA+TGG + chr1_1:11677749-11677768 Msa0008080:intron 40.0%
TGATGGCAACTTCATCTTGA+GGG - chr1_1:11677915-11677934 None:intergenic 40.0%
TCCAAGATGCAAGTTACTGA+TGG - chr1_1:11677932-11677951 None:intergenic 40.0%
TCACGCGATTTAGTGATCTT+CGG - chr1_1:11677955-11677974 None:intergenic 40.0%
TAGTAAGAAGATCAGCGAGT+TGG + chr1_1:11678024-11678043 Msa0008080:intron 40.0%
TTGTCACATAGTAGCAATGG+TGG + chr1_1:11678179-11678198 Msa0008080:intron 40.0%
AGTTGCAGATGAAGTGATGT+AGG + chr1_1:11678504-11678523 Msa0008080:intron 40.0%
TAGCCATGTCAAACTTCTCA+AGG + chr1_1:11678703-11678722 Msa0008080:CDS 40.0%
AGTCCTTGAGAAGTTTGACA+TGG - chr1_1:11678709-11678728 None:intergenic 40.0%
CAAACTTCTCAAGGACTTCT+TGG + chr1_1:11678712-11678731 Msa0008080:CDS 40.0%
! AACAGCATACCCTTGTTTGT+TGG + chr1_1:11678753-11678772 Msa0008080:CDS 40.0%
! ACAGCATACCCTTGTTTGTT+GGG + chr1_1:11678754-11678773 Msa0008080:CDS 40.0%
GAACTCATCCCAACAAACAA+GGG - chr1_1:11678765-11678784 None:intergenic 40.0%
TGAACTCATCCCAACAAACA+AGG - chr1_1:11678766-11678785 None:intergenic 40.0%
TTGGGATGAGTTCAATACCA+AGG + chr1_1:11678772-11678791 Msa0008080:CDS 40.0%
GACCTGAGGCATATATAAAC+AGG + chr1_1:11678927-11678946 Msa0008080:intron 40.0%
TCCCTGTTTATATATGCCTC+AGG - chr1_1:11678932-11678951 None:intergenic 40.0%
AGGCATATATAAACAGGGAG+AGG + chr1_1:11678933-11678952 Msa0008080:intron 40.0%
AAACCTTTGCACCAGTTGTT+TGG - chr1_1:11679225-11679244 None:intergenic 40.0%
TTTACTCAATGCTCAGTGGT+AGG - chr1_1:11679256-11679275 None:intergenic 40.0%
!! TGAGCATTGAGTAAAGCCTT+TGG + chr1_1:11679261-11679280 Msa0008080:intron 40.0%
AAAGCACAATTAGTGGCCAA+AGG - chr1_1:11679280-11679299 None:intergenic 40.0%
TCTCCAATGAGAATGTTGCA+TGG + chr1_1:11679441-11679460 Msa0008080:intron 40.0%
AAGCCATGCAACATTCTCAT+TGG - chr1_1:11679447-11679466 None:intergenic 40.0%
! ATGGCTTGTCTGAAACTAGA+GGG + chr1_1:11679460-11679479 Msa0008080:intron 40.0%
GAAGTCGATAGAGAGATGTA+TGG + chr1_1:11679496-11679515 Msa0008080:intron 40.0%
GAAAGAGATGTTGCAGCAAT+AGG + chr1_1:11679624-11679643 Msa0008080:intron 40.0%
! TTGCATTCAGGTATTGCATC+AGG - chr1_1:11679657-11679676 None:intergenic 40.0%
TGATGCAATACCTGAATGCA+AGG + chr1_1:11679656-11679675 Msa0008080:intron 40.0%
GATGCAATACCTGAATGCAA+GGG + chr1_1:11679657-11679676 Msa0008080:intron 40.0%
AGGATAGTATGTGGTGTTTG+TGG + chr1_1:11679785-11679804 Msa0008080:intron 40.0%
GGATAGTATGTGGTGTTTGT+GGG + chr1_1:11679786-11679805 Msa0008080:intron 40.0%
TGTGTATGTGAGTAAGTGAC+AGG + chr1_1:11679815-11679834 Msa0008080:intron 40.0%
TGTGAGTAAGTGACAGGTTT+CGG + chr1_1:11679821-11679840 Msa0008080:intron 40.0%
GGTTATCATGGAAGACAACA+TGG + chr1_1:11679869-11679888 Msa0008080:intron 40.0%
CAACGATAAGCGTATTGAGA+GGG + chr1_1:11679927-11679946 Msa0008080:intron 40.0%
GAGTAGCCTACAAAGACAAA+TGG + chr1_1:11679951-11679970 Msa0008080:intron 40.0%
TTGGATGTTTATGTTTCCCC+TGG - chr1_1:11680019-11680038 None:intergenic 40.0%
! TGGTGATGAAGGGTTTGATA+AGG + chr1_1:11680065-11680084 Msa0008080:intron 40.0%
! AGGTGATTGCATTCTAAGAG+TGG + chr1_1:11680085-11680104 Msa0008080:intron 40.0%
! GGTGATTGCATTCTAAGAGT+GGG + chr1_1:11680086-11680105 Msa0008080:intron 40.0%
!! GGTCATTTTGCATTCATCAC+AGG - chr1_1:11680140-11680159 None:intergenic 40.0%
GGCAGGTTGCATAATTTAGT+AGG + chr1_1:11680171-11680190 Msa0008080:intron 40.0%
TGCATAATTTAGTAGGGCTC+TGG + chr1_1:11680178-11680197 Msa0008080:intron 40.0%
! ATAATTTAGTAGGGCTCTGG+CGG + chr1_1:11680181-11680200 Msa0008080:intron 40.0%
TAAATGCCTCTGCTGAAAGA+AGG - chr1_1:11680226-11680245 None:intergenic 40.0%
! GTAGTGGGATATACCATTAG+AGG + chr1_1:11680271-11680290 Msa0008080:intron 40.0%
TCTAATGACCTAATAGGAGC+TGG + chr1_1:11680488-11680507 Msa0008080:intron 40.0%
TTGAATGCTTGATTCACGTG+AGG - chr1_1:11680727-11680746 None:intergenic 40.0%
TTGAATGCTTGATTCACGTG+AGG + chr1_1:11680727-11680746 Msa0008080:intron 40.0%
TATTACGTTGTTGGGAGAAC+GGG - chr1_1:11680817-11680836 None:intergenic 40.0%
! AATTACTCCGCTGCATGTTT+TGG - chr1_1:11680945-11680964 None:intergenic 40.0%
! GCCAAGATTTTCATTGACGT+TGG - chr1_1:11680995-11681014 None:intergenic 40.0%
! GGCTCTGATACATATTAGGA+TGG - chr1_1:11681138-11681157 None:intergenic 40.0%
! CTAGGGCTCTGATACATATT+AGG - chr1_1:11681142-11681161 None:intergenic 40.0%
! GTAATGATGGCTTGTAGGTT+TGG - chr1_1:11681178-11681197 None:intergenic 40.0%
AATTATGACCTTAGCGAAGG+GGG - chr1_1:11681543-11681562 None:intergenic 40.0%
CAATTATGACCTTAGCGAAG+GGG - chr1_1:11681544-11681563 None:intergenic 40.0%
CCAATTATGACCTTAGCGAA+GGG - chr1_1:11681545-11681564 None:intergenic 40.0%
TCCAATTATGACCTTAGCGA+AGG - chr1_1:11681546-11681565 None:intergenic 40.0%
AAGGTCATAATTGGACCTGT+CGG + chr1_1:11681551-11681570 Msa0008080:intron 40.0%
TCCTTTATGACCTTAGCGAT+GGG - chr1_1:11681587-11681606 None:intergenic 40.0%
TGACATATGACCTTAGCGAT+GGG - chr1_1:11681628-11681647 None:intergenic 40.0%
TTGTTGCATAGTTAGCGATG+GGG - chr1_1:11681659-11681678 None:intergenic 40.0%
GTTGTTGCATAGTTAGCGAT+GGG - chr1_1:11681660-11681679 None:intergenic 40.0%
TGTTGTTGCATAGTTAGCGA+TGG - chr1_1:11681661-11681680 None:intergenic 40.0%
! GGCACATATGTTGTTGTTGT+AGG - chr1_1:11681740-11681759 None:intergenic 40.0%
ATCGTCTAATGTCGAAGTTG+GGG - chr1_1:11681783-11681802 None:intergenic 40.0%
GTATCGTCTAATGTCGAAGT+TGG - chr1_1:11681785-11681804 None:intergenic 40.0%
CGATACAACAACGTCAACAA+CGG + chr1_1:11681799-11681818 Msa0008080:intron 40.0%
! ATTTTCTGACAGGCCAATCT+AGG - chr1_1:11682200-11682219 None:intergenic 40.0%
!! AGATTGGCCTGTCAGAAAAT+CGG + chr1_1:11682200-11682219 Msa0008080:intron 40.0%
!! GGCCACTGATTTGTCAAAAT+CGG - chr1_1:11682229-11682248 None:intergenic 40.0%
ATTGCTGAGAAGCCCAAAAT+CGG - chr1_1:11682318-11682337 None:intergenic 40.0%
GGGTTTGGGTGATTGAAAAT+TGG - chr1_1:11682392-11682411 None:intergenic 40.0%
AAGTCAGAGAGAACCCTAAT+TGG - chr1_1:11682642-11682661 None:intergenic 40.0%
TGTGGTGAGAAGAGCAATTA+GGG - chr1_1:11682737-11682756 None:intergenic 40.0%
TATTCTCTTGGGAGGAACAA+TGG - chr1_1:11682952-11682971 None:intergenic 40.0%
ACGAGCACTTGTATTCTCTT+GGG - chr1_1:11682963-11682982 None:intergenic 40.0%
GTGCTGCAAAGTAGAAACAA+TGG + chr1_1:11683013-11683032 Msa0008080:intron 40.0%
TGAGCTAAATCCGTCTGAAA+AGG - chr1_1:11683183-11683202 None:intergenic 40.0%
! TATAACTGGCTTATCCTCAC+CGG - chr1_1:11683478-11683497 None:intergenic 40.0%
!! GGTGGATTGACAACTATAAC+TGG - chr1_1:11683492-11683511 None:intergenic 40.0%
! TGGCATTTCTGAAGATGGTA+TGG + chr1_1:11683527-11683546 Msa0008080:intron 40.0%
TGAAGAGAAAGGAGAAGTCT+TGG + chr1_1:11683852-11683871 Msa0008080:CDS 40.0%
TACCTCTAATCGGGAGATAT+GGG - chr1_1:11684090-11684109 None:intergenic 40.0%
TTACCTCTAATCGGGAGATA+TGG - chr1_1:11684091-11684110 None:intergenic 40.0%
!! TTCTCCTCTGGGATATCTAT+TGG - chr1_1:11684594-11684613 None:intergenic 40.0%
ATAGATATCCCAGAGGAGAA+TGG + chr1_1:11684594-11684613 Msa0008080:CDS 40.0%
TAGATATCCCAGAGGAGAAT+GGG + chr1_1:11684595-11684614 Msa0008080:CDS 40.0%
AGCTACTGATATTCAAGGTG+GGG - chr1_1:11684650-11684669 None:intergenic 40.0%
GAGCTACTGATATTCAAGGT+GGG - chr1_1:11684651-11684670 None:intergenic 40.0%
AGAGCTACTGATATTCAAGG+TGG - chr1_1:11684652-11684671 None:intergenic 40.0%
CAACGTGCTTTCGTTTATAC+TGG - chr1_1:11684876-11684895 None:intergenic 40.0%
! TAAACGAAAGCACGTTGATG+TGG + chr1_1:11684879-11684898 Msa0008080:intron 40.0%
TTGAATTCTCATTCCTCCCA+AGG + chr1_1:11685082-11685101 Msa0008080:intron 40.0%
TATAATTAGCGTGTCGTGTC+TGG + chr1_1:11685293-11685312 Msa0008080:intron 40.0%
TGACATCAAGCTCTTGACAT+TGG - chr1_1:11685884-11685903 None:intergenic 40.0%
AATGTCAAGAGCTTGATGTC+AGG + chr1_1:11685883-11685902 Msa0008080:CDS 40.0%
TAACATGCAATGGCTAAGGA+TGG - chr1_1:11686078-11686097 None:intergenic 40.0%
GTCATAACATGCAATGGCTA+AGG - chr1_1:11686082-11686101 None:intergenic 40.0%
CAATCAAAATCACCTCGACA+CGG - chr1_1:11686422-11686441 None:intergenic 40.0%
AAGAGAAGACCAACTACTTC+CGG + chr1_1:11686568-11686587 Msa0008080:CDS 40.0%
AAATGAAACCCGGAAGTAGT+TGG - chr1_1:11686580-11686599 None:intergenic 40.0%
! ACTTCCGGGTTTCATTTTCA+AGG + chr1_1:11686583-11686602 Msa0008080:CDS 40.0%
TTTCAAGGAGTTAGCGTTTG+AGG + chr1_1:11686598-11686617 Msa0008080:CDS 40.0%
GGACTGTGTTCATTCACTTA+TGG + chr1_1:11686727-11686746 Msa0008080:intron 40.0%
CTATATGAGAGGGTTGTGTT+TGG + chr1_1:11686772-11686791 Msa0008080:intron 40.0%
ACATTTGATTGGATCTTCCC+CGG - chr1_1:11686957-11686976 None:intergenic 40.0%
!!! AAGGCTTTTAAAGTGTGTGC+AGG + chr1_1:11687249-11687268 Msa0008080:intron 40.0%
GGTCAACTAAAGTTAACAGC+AGG + chr1_1:11687958-11687977 Msa0008080:CDS 40.0%
!!! ACAGCAGGTTTTGGAGAAAA+TGG + chr1_1:11687973-11687992 Msa0008080:CDS 40.0%
AGGTAAACCAAAATTCAGGC+AGG + chr1_1:11688301-11688320 Msa0008080:CDS 40.0%
! GAAAACTCCTGCCTGAATTT+TGG - chr1_1:11688311-11688330 None:intergenic 40.0%
TTCGTGTTCCAGAAATTGAG+GGG + chr1_1:11688667-11688686 Msa0008080:CDS 40.0%
TTGTGCAACATCTTTCGCAT+TGG - chr1_1:11688840-11688859 None:intergenic 40.0%
!! AGGGGGAAAGTATTCTTATC+CGG - chr1_1:11688872-11688891 None:intergenic 40.0%
TAAGAATACTTTCCCCCTGA+AGG + chr1_1:11688874-11688893 Msa0008080:CDS 40.0%
!! AGAGTTGATAGTTCCTTCAG+GGG - chr1_1:11688890-11688909 None:intergenic 40.0%
AGCATAACGAATCACAGTCA+TGG - chr1_1:11689016-11689035 None:intergenic 40.0%
AGAGAGATTGACTGACAAGT+TGG - chr1_1:11689385-11689404 None:intergenic 40.0%
AGTCATTTCTTCTTTGGTGG+TGG - chr1_1:11689849-11689868 None:intergenic 40.0%
ATTCTGAACAGAACCAAGGA+GGG - chr1_1:11689978-11689997 None:intergenic 40.0%
!!! TTTAGAGTTTTTGGTCGGCA+GGG - chr1_1:11690042-11690061 None:intergenic 40.0%
TACAGGGCACATATCATTTG+TGG - chr1_1:11690274-11690293 None:intergenic 40.0%
TCTTGGTGAAGATCAAATGC+TGG + chr1_1:11690389-11690408 Msa0008080:CDS 40.0%
CTTGGTGAAGATCAAATGCT+GGG + chr1_1:11690390-11690409 Msa0008080:CDS 40.0%
AAGGTAATGTGGAGTTTCAG+GGG + chr1_1:11690566-11690585 Msa0008080:intron 40.0%
TGAGGAAAAACTATGGGACA+AGG + chr1_1:11690654-11690673 Msa0008080:intron 40.0%
TCATTTGACAGGCCATATGA+TGG + chr1_1:11690727-11690746 Msa0008080:intron 40.0%
CATTTGACAGGCCATATGAT+GGG + chr1_1:11690728-11690747 Msa0008080:intron 40.0%
GGCGGCATTATAAGAGAAAA+TGG + chr1_1:11691012-11691031 Msa0008080:CDS 40.0%
! GAACTCTTTCTCTTGGCTTT+GGG + chr1_1:11691034-11691053 Msa0008080:CDS 40.0%
CAACTGGTTATCAGTTCAGT+TGG - chr1_1:11691368-11691387 None:intergenic 40.0%
TTCAACATTTGCGTAGCTTC+TGG - chr1_1:11691699-11691718 None:intergenic 40.0%
! AACAATGAAGCCTTTTGCTG+AGG + chr1_1:11691848-11691867 Msa0008080:CDS 40.0%
CAATCTCCTAAGTCTAGCAT+AGG - chr1_1:11691903-11691922 None:intergenic 40.0%
GTTACCGAATGCAGCAATTG+TGG + chr1_1:11669692-11669711 Msa0008080:CDS 45.0%
! GTGTATGTTTGGTTCCAGAG+TGG + chr1_1:11669982-11670001 Msa0008080:intron 45.0%
TCACTCGTGATCAATTCTGG+AGG - chr1_1:11670058-11670077 None:intergenic 45.0%
GCTTCACTCGTGATCAATTC+TGG - chr1_1:11670061-11670080 None:intergenic 45.0%
CAAAGGTCCTGTCAAGTTTG+AGG + chr1_1:11670318-11670337 Msa0008080:intron 45.0%
CTTTACCCTCCCCCTTTAAT+CGG + chr1_1:11670361-11670380 Msa0008080:intron 45.0%
GACTGTTGATCAAGATCGGA+AGG + chr1_1:11670485-11670504 Msa0008080:intron 45.0%
TAGTGGAGCTCATTAACCAC+TGG - chr1_1:11670596-11670615 None:intergenic 45.0%
TTGGTGCGAAGAATTTACCG+GGG + chr1_1:11670918-11670937 Msa0008080:intron 45.0%
ATGGAAAAAATGTGGTCGGG+AGG - chr1_1:11670949-11670968 None:intergenic 45.0%
TTGCAAGCTGTGTGGTTCAA+CGG + chr1_1:11671398-11671417 Msa0008080:CDS 45.0%
GGTTCAACGGGAAAGATAAC+AGG + chr1_1:11671411-11671430 Msa0008080:CDS 45.0%
AACAGGAAGCTAATCGGGTA+CGG + chr1_1:11671428-11671447 Msa0008080:intron 45.0%
CCGGTATAAGAAACCAACCA+AGG - chr1_1:11671918-11671937 None:intergenic 45.0%
! TTTTGACAGTGGGTCTGGAA+TGG + chr1_1:11672013-11672032 Msa0008080:CDS 45.0%
GGCCAAAGAGATTCGGAATT+AGG + chr1_1:11672353-11672372 Msa0008080:intron 45.0%
CCAGAATCAAGAGAAGCTAG+TGG - chr1_1:11672770-11672789 None:intergenic 45.0%
! CCACTAGCTTCTCTTGATTC+TGG + chr1_1:11672767-11672786 Msa0008080:intron 45.0%
GGACTTCTTATCTCTTGTGC+AGG + chr1_1:11672788-11672807 Msa0008080:intron 45.0%
AGGAAAACCGCCATACCTAA+TGG + chr1_1:11672861-11672880 Msa0008080:CDS 45.0%
!!! TGTGATGTGCAGCCTTGTTT+TGG + chr1_1:11673194-11673213 Msa0008080:intron 45.0%
CCCAGATGCATAGATGCTAT+AGG - chr1_1:11673239-11673258 None:intergenic 45.0%
ATTCTCGACTTCACCATCGT+GGG - chr1_1:11673598-11673617 None:intergenic 45.0%
AATTCTCGACTTCACCATCG+TGG - chr1_1:11673599-11673618 None:intergenic 45.0%
GGTGAAGTCGAGAATTCTAG+AGG + chr1_1:11673603-11673622 Msa0008080:CDS 45.0%
! TGTTTTCAGCATTGTGGACC+AGG + chr1_1:11673683-11673702 Msa0008080:intron 45.0%
TTGAAGTGGAGGGGAAAGAA+AGG + chr1_1:11673773-11673792 Msa0008080:intron 45.0%
CAGCCCAAAAGAGCTGAAAA+GGG + chr1_1:11674246-11674265 Msa0008080:intron 45.0%
! GGAAGTATATGTCCTTGAGG+TGG - chr1_1:11674508-11674527 None:intergenic 45.0%
! AGGGGAAGTATATGTCCTTG+AGG - chr1_1:11674511-11674530 None:intergenic 45.0%
! ATGACTTGTCTGACAAAGGG+AGG + chr1_1:11674739-11674758 Msa0008080:CDS 45.0%
ACACCTTAACTAGCTCATCG+AGG + chr1_1:11674803-11674822 Msa0008080:intron 45.0%
GCTCATCGAGGATACTAGTA+TGG + chr1_1:11674815-11674834 Msa0008080:intron 45.0%
CAGAACTACACTCTTACGTC+AGG + chr1_1:11675279-11675298 Msa0008080:intron 45.0%
ATCTAACAGAGATTCGAGGC+GGG + chr1_1:11675792-11675811 Msa0008080:CDS 45.0%
AAGGCGTGCATTTGCTTCTT+TGG - chr1_1:11676078-11676097 None:intergenic 45.0%
! CAGAGACCCGACTAAAGTTT+TGG - chr1_1:11676290-11676309 None:intergenic 45.0%
ACTTTAGTCGGGTCTCTGTT+AGG + chr1_1:11676292-11676311 Msa0008080:CDS 45.0%
GTGCATGTTTGGTATTACGG+TGG + chr1_1:11676595-11676614 Msa0008080:intron 45.0%
!! GTGCTGGTGGTTTTTCTTTG+GGG - chr1_1:11676781-11676800 None:intergenic 45.0%
!!! GGTGCTGGTGGTTTTTCTTT+GGG - chr1_1:11676782-11676801 None:intergenic 45.0%
! TAGGGGATTCGGCATTTTGA+GGG - chr1_1:11676803-11676822 None:intergenic 45.0%
! TTAGGGGATTCGGCATTTTG+AGG - chr1_1:11676804-11676823 None:intergenic 45.0%
!!! TTGGCGGTGTTGGTTCTTTT+AGG - chr1_1:11676835-11676854 None:intergenic 45.0%
ACCGCCAACAGTGATCAATT+AGG + chr1_1:11676847-11676866 Msa0008080:intron 45.0%
GCCTAATTGATCACTGTTGG+CGG - chr1_1:11676851-11676870 None:intergenic 45.0%
GGTGCCTAATTGATCACTGT+TGG - chr1_1:11676854-11676873 None:intergenic 45.0%
TTCATGTGAGGCTGAGTCAA+AGG + chr1_1:11677870-11677889 Msa0008080:intron 45.0%
ATGGCAACTTCATCTTGAGG+GGG - chr1_1:11677913-11677932 None:intergenic 45.0%
GATGGCAACTTCATCTTGAG+GGG - chr1_1:11677914-11677933 None:intergenic 45.0%
CTGATGGCAACTTCATCTTG+AGG - chr1_1:11677916-11677935 None:intergenic 45.0%
! GCCATCAGTAACTTGCATCT+TGG + chr1_1:11677928-11677947 Msa0008080:intron 45.0%
GTTTGTGAACAAGTTCGGGA+TGG - chr1_1:11678083-11678102 None:intergenic 45.0%
!!! AGCAATGGTGGTTTTGACAC+TGG + chr1_1:11678191-11678210 Msa0008080:intron 45.0%
TTGTAGCACGTCTTCAACTG+AGG - chr1_1:11678291-11678310 None:intergenic 45.0%
TGCTTTCACAGATGCAGACT+GGG - chr1_1:11678403-11678422 None:intergenic 45.0%
ATGCTTTCACAGATGCAGAC+TGG - chr1_1:11678404-11678423 None:intergenic 45.0%
TGATGAGTGGAATCTGTGGT+AGG + chr1_1:11678618-11678637 Msa0008080:CDS 45.0%
TCCATCATTCAGAGTGAGTG+TGG + chr1_1:11678644-11678663 Msa0008080:CDS 45.0%
TCAATACCAAGGAAGCAGTG+TGG + chr1_1:11678783-11678802 Msa0008080:CDS 45.0%
GTAGGTAATGATTGGACCTG+AGG + chr1_1:11678913-11678932 Msa0008080:intron 45.0%
! TCTTGCTGGTAGTGAAACCA+TGG + chr1_1:11678960-11678979 Msa0008080:intron 45.0%
! CTTGCTGGTAGTGAAACCAT+GGG + chr1_1:11678961-11678980 Msa0008080:intron 45.0%
TTAGACAATCACCTCGTGCA+TGG - chr1_1:11679015-11679034 None:intergenic 45.0%
TGTATATCTCTGAGTCCTGG+AGG + chr1_1:11679079-11679098 Msa0008080:intron 45.0%
CTCACTATTGCCTTGGGAAA+AGG - chr1_1:11679181-11679200 None:intergenic 45.0%
! ATGGTTTGAGGCCAAACAAC+TGG + chr1_1:11679211-11679230 Msa0008080:intron 45.0%
AGGCTTTACTCAATGCTCAG+TGG - chr1_1:11679260-11679279 None:intergenic 45.0%
! CATGGCTTGTCTGAAACTAG+AGG + chr1_1:11679459-11679478 Msa0008080:intron 45.0%
GTTACTCCCAACACTTCAAG+AGG - chr1_1:11679591-11679610 None:intergenic 45.0%
ATCTTGTGCAATCCCTCAAG+AGG - chr1_1:11679685-11679704 None:intergenic 45.0%
TTGAGGGATTGCACAAGATG+TGG + chr1_1:11679686-11679705 Msa0008080:intron 45.0%
TGAGGGATTGCACAAGATGT+GGG + chr1_1:11679687-11679706 Msa0008080:intron 45.0%
TGCACAAGGCTGTATTTGGT+TGG + chr1_1:11679747-11679766 Msa0008080:intron 45.0%
GCACAAGGCTGTATTTGGTT+GGG + chr1_1:11679748-11679767 Msa0008080:intron 45.0%
CACAAGGCTGTATTTGGTTG+GGG + chr1_1:11679749-11679768 Msa0008080:intron 45.0%
TTTGGTTGGGGTAGGTTAAG+AGG + chr1_1:11679761-11679780 Msa0008080:intron 45.0%
AGTATGTGGTGTTTGTGGGA+TGG + chr1_1:11679790-11679809 Msa0008080:intron 45.0%
GCAACGATAAGCGTATTGAG+AGG + chr1_1:11679926-11679945 Msa0008080:intron 45.0%
ACTGTTATGTGGTTTCAGCC+AGG + chr1_1:11679998-11680017 Msa0008080:intron 45.0%
CTGTTATGTGGTTTCAGCCA+GGG + chr1_1:11679999-11680018 Msa0008080:intron 45.0%
TGTTATGTGGTTTCAGCCAG+GGG + chr1_1:11680000-11680019 Msa0008080:intron 45.0%
! TGCATTCTAAGAGTGGGTGT+TGG + chr1_1:11680092-11680111 Msa0008080:intron 45.0%
ATGACCATAGTTGAGATGGC+AGG + chr1_1:11680154-11680173 Msa0008080:intron 45.0%
ATGATGCCTTCTTTCAGCAG+AGG + chr1_1:11680217-11680236 Msa0008080:intron 45.0%
!! TCAGCAGAGGCATTTAATGC+AGG + chr1_1:11680230-11680249 Msa0008080:intron 45.0%
!! CAGCAGAGGCATTTAATGCA+GGG + chr1_1:11680231-11680250 Msa0008080:intron 45.0%
!! AGCAGAGGCATTTAATGCAG+GGG + chr1_1:11680232-11680251 Msa0008080:intron 45.0%
ATTACGTTGTTGGGAGAACG+GGG - chr1_1:11680816-11680835 None:intergenic 45.0%
! TGATGGCTTGTAGGTTTGGT+CGG - chr1_1:11681174-11681193 None:intergenic 45.0%
! TGCAGGTAATGATGGCTTGT+AGG - chr1_1:11681183-11681202 None:intergenic 45.0%
! GGGTAACTTGCAGGTAATGA+TGG - chr1_1:11681191-11681210 None:intergenic 45.0%
CTGCAAGTTACCCATACGAA+GGG + chr1_1:11681198-11681217 Msa0008080:intron 45.0%
GAAAACGTTGCCCTTCGTAT+GGG - chr1_1:11681211-11681230 None:intergenic 45.0%
TGAAAACGTTGCCCTTCGTA+TGG - chr1_1:11681212-11681231 None:intergenic 45.0%
!! GGCAACGTTTTCAAGCAGAA+GGG + chr1_1:11681219-11681238 Msa0008080:intron 45.0%
!! GCAACGTTTTCAAGCAGAAG+GGG + chr1_1:11681220-11681239 Msa0008080:intron 45.0%
! TTGTTGCATGGTCGAGTTGT+CGG - chr1_1:11681412-11681431 None:intergenic 45.0%
TTGTTCTCGTCGTTGTTGCA+TGG - chr1_1:11681424-11681443 None:intergenic 45.0%
ATTATGCATGTGGTACCACC+AGG + chr1_1:11681509-11681528 Msa0008080:intron 45.0%
TTATGCATGTGGTACCACCA+GGG + chr1_1:11681510-11681529 Msa0008080:intron 45.0%
CCCTTCGCTAAGGTCATAAT+TGG + chr1_1:11681542-11681561 Msa0008080:intron 45.0%
AGGTCATAATTGGACCTGTC+GGG + chr1_1:11681552-11681571 Msa0008080:intron 45.0%
CTTTATGACCTTAGCGATGG+GGG - chr1_1:11681585-11681604 None:intergenic 45.0%
CCTTTATGACCTTAGCGATG+GGG - chr1_1:11681586-11681605 None:intergenic 45.0%
GTCCTTTATGACCTTAGCGA+TGG - chr1_1:11681588-11681607 None:intergenic 45.0%
AAGGTCATAAAGGACCTGTC+AGG + chr1_1:11681593-11681612 Msa0008080:intron 45.0%
ACATATGACCTTAGCGATGG+GGG - chr1_1:11681626-11681645 None:intergenic 45.0%
GACATATGACCTTAGCGATG+GGG - chr1_1:11681627-11681646 None:intergenic 45.0%
CTGACATATGACCTTAGCGA+TGG - chr1_1:11681629-11681648 None:intergenic 45.0%
CATCGCTAAGGTCATATGTC+AGG + chr1_1:11681627-11681646 Msa0008080:intron 45.0%
TGTTGCATAGTTAGCGATGG+GGG - chr1_1:11681658-11681677 None:intergenic 45.0%
!! GGCCGATTTTGACAAATCAG+TGG + chr1_1:11682224-11682243 Msa0008080:intron 45.0%
!! GGTGGCCGATTTTGACAATT+CGG + chr1_1:11682289-11682308 Msa0008080:intron 45.0%
GGCCACCGAATTGTCAAAAT+CGG - chr1_1:11682297-11682316 None:intergenic 45.0%
!! ACAATTCGGTGGCCGATTTT+GGG + chr1_1:11682303-11682322 Msa0008080:intron 45.0%
CTGTGGTGAGAAGAGCAATT+AGG - chr1_1:11682738-11682757 None:intergenic 45.0%
TAAGGGAAAGAGTAGGACTG+TGG - chr1_1:11682755-11682774 None:intergenic 45.0%
AGCACTTGTATTCTCTTGGG+AGG - chr1_1:11682960-11682979 None:intergenic 45.0%
CACGAGCACTTGTATTCTCT+TGG - chr1_1:11682964-11682983 None:intergenic 45.0%
GAAACAATGGGAGAGTGAGT+TGG + chr1_1:11683026-11683045 Msa0008080:intron 45.0%
GCCCAAGTTCTTCAAAGCAA+TGG - chr1_1:11683220-11683239 None:intergenic 45.0%
! TGTCGCCGTGCTAATTTTGA+CGG - chr1_1:11683370-11683389 None:intergenic 45.0%
! TATGATGACGAAGCTGATGC+CGG + chr1_1:11683456-11683475 Msa0008080:CDS 45.0%
AGTTGTCAATCCACCGAACA+AGG + chr1_1:11683497-11683516 Msa0008080:CDS 45.0%
ATGCCAAGTGCTTCCTTGTT+CGG - chr1_1:11683513-11683532 None:intergenic 45.0%
! GCACTTGGCATTTCTGAAGA+TGG + chr1_1:11683522-11683541 Msa0008080:CDS 45.0%
!! TGAGACTAGTCTAGTGCAAC+TGG - chr1_1:11683718-11683737 None:intergenic 45.0%
!! TCATCGGGTTCTGAAGAGAA+AGG + chr1_1:11683841-11683860 Msa0008080:CDS 45.0%
AAGGAGAAGTCTTGGAGTCA+TGG + chr1_1:11683860-11683879 Msa0008080:CDS 45.0%
! TGTTAAGGGGAGCATGTTCA+GGG + chr1_1:11683897-11683916 Msa0008080:CDS 45.0%
ATTCAGGAATCTTACCACCC+AGG - chr1_1:11683985-11684004 None:intergenic 45.0%
TCTAATCGGGAGATATGGGA+TGG - chr1_1:11684086-11684105 None:intergenic 45.0%
ATCCCATATCTCCCGATTAG+AGG + chr1_1:11684085-11684104 Msa0008080:intron 45.0%
!! CGTTTATACTGGTTTGTGCC+TGG - chr1_1:11684865-11684884 None:intergenic 45.0%
GATGATACTATGTCCTTGGG+AGG - chr1_1:11685098-11685117 None:intergenic 45.0%
CTACTTTAACTCGAGCGAGA+TGG + chr1_1:11685556-11685575 Msa0008080:intron 45.0%
TGCAATGGCTAAGGATGGAA+AGG - chr1_1:11686073-11686092 None:intergenic 45.0%
TAAACGGAGCTCGATTGTCA+TGG - chr1_1:11686107-11686126 None:intergenic 45.0%
AGTTCAACAGTCACGTCATC+CGG - chr1_1:11686138-11686157 None:intergenic 45.0%
TGACGTGACTGTTGAACTTC+AGG + chr1_1:11686140-11686159 Msa0008080:CDS 45.0%
! TCAGTATCTTTTCCGTGTCG+AGG + chr1_1:11686407-11686426 Msa0008080:CDS 45.0%
AGAGAAGACCAACTACTTCC+GGG + chr1_1:11686569-11686588 Msa0008080:CDS 45.0%
GGTTGGATCGGTAGAAATTC+CGG + chr1_1:11686935-11686954 Msa0008080:intron 45.0%
GTTGGATCGGTAGAAATTCC+GGG + chr1_1:11686936-11686955 Msa0008080:intron 45.0%
TTGGATCGGTAGAAATTCCG+GGG + chr1_1:11686937-11686956 Msa0008080:intron 45.0%
!!! TGCTGCAATGCCGATTTTGT+AGG + chr1_1:11687090-11687109 Msa0008080:intron 45.0%
AATCTTGCGAATCGCATCTG+AGG + chr1_1:11688343-11688362 Msa0008080:CDS 45.0%
CAAAAGGTCCCCTCAATTTC+TGG - chr1_1:11688678-11688697 None:intergenic 45.0%
TGTTGCACAACATCTATCCC+CGG + chr1_1:11688850-11688869 Msa0008080:CDS 45.0%
!! GGGGAAAGTATTCTTATCCG+GGG - chr1_1:11688870-11688889 None:intergenic 45.0%
!! GGGGGAAAGTATTCTTATCC+GGG - chr1_1:11688871-11688890 None:intergenic 45.0%
!! GAGTTGATAGTTCCTTCAGG+GGG - chr1_1:11688889-11688908 None:intergenic 45.0%
ATCTCTGTCCTCAATAGCGA+TGG + chr1_1:11688932-11688951 Msa0008080:CDS 45.0%
ATACCTTGCCATCGCTATTG+AGG - chr1_1:11688943-11688962 None:intergenic 45.0%
! GGAGTATAATGGAGGCAATG+AGG + chr1_1:11689714-11689733 Msa0008080:intron 45.0%
GATTCTGAACAGAACCAAGG+AGG - chr1_1:11689979-11689998 None:intergenic 45.0%
CAGGATTCTGAACAGAACCA+AGG - chr1_1:11689982-11690001 None:intergenic 45.0%
TTCAGAATCCTGAGCTTAGC+AGG + chr1_1:11689990-11690009 Msa0008080:CDS 45.0%
TTGACAAACCTGCTAAGCTC+AGG - chr1_1:11690001-11690020 None:intergenic 45.0%
!!! GTTTAGAGTTTTTGGTCGGC+AGG - chr1_1:11690043-11690062 None:intergenic 45.0%
AGGGCACATATCATTTGTGG+AGG - chr1_1:11690271-11690290 None:intergenic 45.0%
! TGGGACAAGGCTTTATGACT+AGG + chr1_1:11690667-11690686 Msa0008080:intron 45.0%
TCAAATAGGAGAACGCCAGA+AGG + chr1_1:11690802-11690821 Msa0008080:CDS 45.0%
! AGAACGCCAGAAGGCTTTAT+GGG + chr1_1:11690811-11690830 Msa0008080:CDS 45.0%
GCATAACCCATAAAGCCTTC+TGG - chr1_1:11690820-11690839 None:intergenic 45.0%
ATTCCCATCACCTAGAGACA+AGG + chr1_1:11690860-11690879 Msa0008080:CDS 45.0%
TGTCCTTGTCTCTAGGTGAT+GGG - chr1_1:11690866-11690885 None:intergenic 45.0%
! GGTGCTGTATCATTAGATGG+CGG + chr1_1:11690994-11691013 Msa0008080:CDS 45.0%
GGAACTCTTTCTCTTGGCTT+TGG + chr1_1:11691033-11691052 Msa0008080:CDS 45.0%
GTGAGCATGTGATGACTTCT+AGG + chr1_1:11691083-11691102 Msa0008080:intron 45.0%
! TTTTCCTTGTGGGAGCAAGA+TGG + chr1_1:11691665-11691684 Msa0008080:CDS 45.0%
ATATCCATCTTGCTCCCACA+AGG - chr1_1:11691672-11691691 None:intergenic 45.0%
AACATTTGCGTAGCTTCTGG+AGG - chr1_1:11691696-11691715 None:intergenic 45.0%
TGTTCCAATGCCTCAGCAAA+AGG - chr1_1:11691861-11691880 None:intergenic 45.0%
!! TATACAAAAAAAAAAAAAAA+AGG - chr1_1:11670807-11670826 None:intergenic 5.0%
!!! TAAAAAATATATTTTAATGA+AGG - chr1_1:11672983-11673002 None:intergenic 5.0%
!! AAAATTAATATTAATCATTA+TGG + chr1_1:11674646-11674665 Msa0008080:intron 5.0%
!!! ATTTATTTATTTTTTTTGAA+TGG + chr1_1:11676687-11676706 Msa0008080:intron 5.0%
!! AAATAAATTAAAATATTCAA+AGG + chr1_1:11676987-11677006 Msa0008080:intron 5.0%
!! AATAAATTAAAATATTCAAA+GGG + chr1_1:11676988-11677007 Msa0008080:intron 5.0%
!! GAATTATATATTATTATTAT+TGG - chr1_1:11681258-11681277 None:intergenic 5.0%
!! TAGAAATAATTAATTATTAA+GGG - chr1_1:11682772-11682791 None:intergenic 5.0%
!! ATTATTAATATATGTTATAT+TGG - chr1_1:11682860-11682879 None:intergenic 5.0%
!! TTATAATAAATTCAATAATT+AGG - chr1_1:11684163-11684182 None:intergenic 5.0%
TACATGAAGGGAGGAGACCA+TGG - chr1_1:11670756-11670775 None:intergenic 50.0%
TGCAAGCTGTGTGGTTCAAC+GGG + chr1_1:11671399-11671418 Msa0008080:CDS 50.0%
CTGACTCTTGCCAACTCTTG+AGG + chr1_1:11671708-11671727 Msa0008080:intron 50.0%
TCTCTTGTGCAGGGGAAAGA+TGG + chr1_1:11672798-11672817 Msa0008080:intron 50.0%
CTCTTGTGCAGGGGAAAGAT+GGG + chr1_1:11672799-11672818 Msa0008080:intron 50.0%
TAGCATCTATGCATCTGGGG+AGG + chr1_1:11673240-11673259 Msa0008080:CDS 50.0%
TTCTCGACTTCACCATCGTG+GGG - chr1_1:11673597-11673616 None:intergenic 50.0%
TAATGGAGGGAAGGAGAGCA+AGG + chr1_1:11673719-11673738 Msa0008080:intron 50.0%
AATGGAGGGAAGGAGAGCAA+GGG + chr1_1:11673720-11673739 Msa0008080:intron 50.0%
! CCTTTTCAGCTCTTTTGGGC+TGG - chr1_1:11674248-11674267 None:intergenic 50.0%
CCAGCCCAAAAGAGCTGAAA+AGG + chr1_1:11674245-11674264 Msa0008080:intron 50.0%
ATATGTCCTTGAGGTGGCAC+AGG - chr1_1:11674502-11674521 None:intergenic 50.0%
TCTAACAGAGATTCGAGGCG+GGG + chr1_1:11675793-11675812 Msa0008080:CDS 50.0%
TTAGTCGGGTCTCTGTTAGG+CGG + chr1_1:11676295-11676314 Msa0008080:CDS 50.0%
AAGTTTACCCAGCGAGCATC+TGG - chr1_1:11676336-11676355 None:intergenic 50.0%
!!! GGGTGCTGGTGGTTTTTCTT+TGG - chr1_1:11676783-11676802 None:intergenic 50.0%
!! ATTCGGCATTTTGAGGGTGC+TGG - chr1_1:11676797-11676816 None:intergenic 50.0%
TTGATCACTGTTGGCGGTGT+TGG - chr1_1:11676845-11676864 None:intergenic 50.0%
! TTCATCTTGAGGGGGCGTAT+TGG - chr1_1:11677905-11677924 None:intergenic 50.0%
CACTAAATCGCGTGAGCCAA+AGG + chr1_1:11677960-11677979 Msa0008080:intron 50.0%
CTAAATCGCGTGTGAGCCAA+AGG + chr1_1:11677999-11678018 Msa0008080:intron 50.0%
CTGCAACTGCTGAACTAGTG+TGG - chr1_1:11678247-11678266 None:intergenic 50.0%
CACTAGTTCAGCAGTTGCAG+TGG + chr1_1:11678247-11678266 Msa0008080:intron 50.0%
GCTTTCACAGATGCAGACTG+GGG - chr1_1:11678402-11678421 None:intergenic 50.0%
CCACAGATTCCACTCATCAC+AGG - chr1_1:11678617-11678636 None:intergenic 50.0%
CCTGTGATGAGTGGAATCTG+TGG + chr1_1:11678614-11678633 Msa0008080:CDS 50.0%
GCCACACTCACTCTGAATGA+TGG - chr1_1:11678648-11678667 None:intergenic 50.0%
TTCAGAGTGAGTGTGGCTGT+AGG + chr1_1:11678651-11678670 Msa0008080:CDS 50.0%
TCAGAGTGAGTGTGGCTGTA+GGG + chr1_1:11678652-11678671 Msa0008080:CDS 50.0%
! AGAGCATCATACCATGCACG+AGG + chr1_1:11679001-11679020 Msa0008080:intron 50.0%
GTTTACATGACTCAGCCTCC+AGG - chr1_1:11679097-11679116 None:intergenic 50.0%
AGGCCAAACAACTGGTGCAA+AGG + chr1_1:11679219-11679238 Msa0008080:intron 50.0%
! GGCATTGAGCTCTTCGGAAA+TGG + chr1_1:11679414-11679433 Msa0008080:intron 50.0%
!! AATGCAAGGGTGCCTCTTGA+GGG + chr1_1:11679670-11679689 Msa0008080:intron 50.0%
CAGGTGCACAAGGCTGTATT+TGG + chr1_1:11679743-11679762 Msa0008080:intron 50.0%
AGGCTGTATTTGGTTGGGGT+AGG + chr1_1:11679753-11679772 Msa0008080:intron 50.0%
GTTGGGGTAGGTTAAGAGGT+AGG + chr1_1:11679765-11679784 Msa0008080:intron 50.0%
GCAACCTGCCATCTCAACTA+TGG - chr1_1:11680161-11680180 None:intergenic 50.0%
! GCATTTAATGCAGGGGTGTG+AGG + chr1_1:11680239-11680258 Msa0008080:intron 50.0%
! TTTAATGCAGGGGTGTGAGG+TGG + chr1_1:11680242-11680261 Msa0008080:intron 50.0%
!! TGTGAGGTGGTGTTGTGTAG+TGG + chr1_1:11680255-11680274 Msa0008080:intron 50.0%
!! GTGAGGTGGTGTTGTGTAGT+GGG + chr1_1:11680256-11680275 Msa0008080:intron 50.0%
TGTATGGGCCAGCTCCTATT+AGG - chr1_1:11680499-11680518 None:intergenic 50.0%
TTCACGTGAGGCTGAGTCAA+AGG - chr1_1:11680739-11680758 None:intergenic 50.0%
TTCACGTGAGGCTGAGTCAA+AGG + chr1_1:11680739-11680758 Msa0008080:intron 50.0%
! TTGGTCGGCTCAAGTGTCTA+GGG - chr1_1:11681159-11681178 None:intergenic 50.0%
! TTTGGTCGGCTCAAGTGTCT+AGG - chr1_1:11681160-11681179 None:intergenic 50.0%
! CCTTCGTATGGGTAACTTGC+AGG - chr1_1:11681200-11681219 None:intergenic 50.0%
CCTGCAAGTTACCCATACGA+AGG + chr1_1:11681197-11681216 Msa0008080:intron 50.0%
!! GGGCAACGTTTTCAAGCAGA+AGG + chr1_1:11681218-11681237 Msa0008080:intron 50.0%
CCCCATCGCTAAGGTCATAA+AGG + chr1_1:11681583-11681602 Msa0008080:intron 50.0%
TTGGCCTGTCAGAAAATCGG+TGG + chr1_1:11682203-11682222 Msa0008080:intron 50.0%
!! GGCCGATTTTGACAATTCGG+TGG + chr1_1:11682292-11682311 Msa0008080:intron 50.0%
!! GACAATTCGGTGGCCGATTT+TGG + chr1_1:11682302-11682321 Msa0008080:intron 50.0%
CCCTAATTGGACGAAGAACG+CGG - chr1_1:11682629-11682648 None:intergenic 50.0%
CCGCGTTCTTCGTCCAATTA+GGG + chr1_1:11682626-11682645 Msa0008080:intron 50.0%
! GTGTTAAGGGGAGCATGTTC+AGG + chr1_1:11683896-11683915 Msa0008080:CDS 50.0%
GAGAAGCTCGGATCATATGC+AGG + chr1_1:11684473-11684492 Msa0008080:CDS 50.0%
CAGGCCAATAGATATCCCAG+AGG + chr1_1:11684587-11684606 Msa0008080:intron 50.0%
!! TCGGTGTCGATCACGCTTAT+AGG - chr1_1:11684684-11684703 None:intergenic 50.0%
AAGCGTGATCGACACCGAAA+AGG + chr1_1:11684686-11684705 Msa0008080:CDS 50.0%
AAACCATGTGTCTGAAGGCG+TGG + chr1_1:11687672-11687691 Msa0008080:CDS 50.0%
! GTGCCTGATTTTTGTGCCAC+TGG + chr1_1:11688465-11688484 Msa0008080:CDS 50.0%
CCACCAGTGGCACAAAAATC+AGG - chr1_1:11688471-11688490 None:intergenic 50.0%
!! CCTGATTTTTGTGCCACTGG+TGG + chr1_1:11688468-11688487 Msa0008080:CDS 50.0%
AGAGCTGTGTCTGACTGCAA+AGG + chr1_1:11688725-11688744 Msa0008080:CDS 50.0%
TGTCCTCAATAGCGATGGCA+AGG + chr1_1:11688937-11688956 Msa0008080:CDS 50.0%
CTGCGCAATCTCAAGTGAGA+AGG - chr1_1:11689156-11689175 None:intergenic 50.0%
CTTCTCACTTGAGATTGCGC+AGG + chr1_1:11689154-11689173 Msa0008080:intron 50.0%
! GGTGGTGGCAAACAACAAGT+CGG - chr1_1:11689834-11689853 None:intergenic 50.0%
CACGTGCAGAGAGACTACAT+AGG - chr1_1:11689910-11689929 None:intergenic 50.0%
!!! AGTTTTTGGTCGGCAGGGAT+GGG - chr1_1:11690037-11690056 None:intergenic 50.0%
GCTGCTGAAGCAGCTAATCT+TGG + chr1_1:11690498-11690517 Msa0008080:CDS 50.0%
GAGAACGCCAGAAGGCTTTA+TGG + chr1_1:11690810-11690829 Msa0008080:CDS 50.0%
CTGTCCTTGTCTCTAGGTGA+TGG - chr1_1:11690867-11690886 None:intergenic 50.0%
CCTAGAGACAAGGACAGCAT+CGG + chr1_1:11690870-11690889 Msa0008080:CDS 50.0%
CTAGAGACAAGGACAGCATC+GGG + chr1_1:11690871-11690890 Msa0008080:CDS 50.0%
! GAAGCCTTTTGCTGAGGCAT+TGG + chr1_1:11691854-11691873 Msa0008080:CDS 50.0%
AGCATAGGTGTCCCAATCTC+TGG - chr1_1:11691888-11691907 None:intergenic 50.0%
GGGACACCTATGCTAGACTT+AGG + chr1_1:11691894-11691913 Msa0008080:CDS 50.0%
TCAGCATTGTGGACCAGGAG+AGG + chr1_1:11673688-11673707 Msa0008080:intron 55.0%
ATGGAGGGAAGGAGAGCAAG+GGG + chr1_1:11673721-11673740 Msa0008080:intron 55.0%
GAAACTCCTGTGCCACCTCA+AGG + chr1_1:11674493-11674512 Msa0008080:CDS 55.0%
TCTCCTTCCAGATGCTCGCT+GGG + chr1_1:11676326-11676345 Msa0008080:CDS 55.0%
TTACCCAGCGAGCATCTGGA+AGG - chr1_1:11676332-11676351 None:intergenic 55.0%
TTCACAGATGCAGACTGGGG+TGG - chr1_1:11678399-11678418 None:intergenic 55.0%
CAGAGTGAGTGTGGCTGTAG+GGG + chr1_1:11678653-11678672 Msa0008080:CDS 55.0%
!! CAAGAGGCACCCTTGCATTC+AGG - chr1_1:11679669-11679688 None:intergenic 55.0%
!! GAATGCAAGGGTGCCTCTTG+AGG + chr1_1:11679669-11679688 Msa0008080:intron 55.0%
GGGATTGCACAAGATGTGGG+TGG + chr1_1:11679690-11679709 Msa0008080:intron 55.0%
AGTAGTGAGCACAGGTGGCA+GGG + chr1_1:11679713-11679732 Msa0008080:intron 55.0%
GCAGTGTGACACTCCGTTGT+TGG - chr1_1:11680863-11680882 None:intergenic 55.0%
GCATTAAGCCCCCTTCGCTA+AGG + chr1_1:11681532-11681551 Msa0008080:intron 55.0%
GCATTAAGCCCCCATCGCTA+AGG + chr1_1:11681574-11681593 Msa0008080:intron 55.0%
ATGGGGGCTTAATGCCTGAC+AGG - chr1_1:11681610-11681629 None:intergenic 55.0%
GCATTAAGCCCCCATCGCTA+AGG + chr1_1:11681574-11681593 Msa0008080:intron 55.0%
!!! TCGGCCACCGATTTTCTGAC+AGG - chr1_1:11682210-11682229 None:intergenic 55.0%
GCCGCGTTCTTCGTCCAATT+AGG + chr1_1:11682625-11682644 Msa0008080:intron 55.0%
CCAAGTGCTTCCTTGTTCGG+TGG - chr1_1:11683510-11683529 None:intergenic 55.0%
!! CCACCGAACAAGGAAGCACT+TGG + chr1_1:11683507-11683526 Msa0008080:CDS 55.0%
GTTTGTGCCTGGCGAGTCAA+TGG - chr1_1:11684854-11684873 None:intergenic 55.0%
! GTTTTCCAGCTGACCACCAG+TGG - chr1_1:11688484-11688503 None:intergenic 55.0%
!!! GAGTTTTTGGTCGGCAGGGA+TGG - chr1_1:11690038-11690057 None:intergenic 55.0%
CCGATGCTGTCCTTGTCTCT+AGG - chr1_1:11690873-11690892 None:intergenic 55.0%
AACAGAGATTCGAGGCGGGG+AGG + chr1_1:11675796-11675815 Msa0008080:CDS 60.0%
GTCTCCTTCCAGATGCTCGC+TGG + chr1_1:11676325-11676344 Msa0008080:CDS 60.0%
!!! CGGCATTTTGAGGGTGCTGG+TGG - chr1_1:11676794-11676813 None:intergenic 60.0%
CAGTTGCAGTGGCCACTGCA+CGG + chr1_1:11678258-11678277 Msa0008080:intron 60.0%
! TGAGGCTGAGTACCGTGCAG+TGG - chr1_1:11678273-11678292 None:intergenic 60.0%
TGCAGACTGGGGTGGCAATG+TGG - chr1_1:11678391-11678410 None:intergenic 60.0%
AGTGTGGCTGTAGGGGACAG+AGG + chr1_1:11678660-11678679 Msa0008080:CDS 60.0%
! GCTGTAGGGGACAGAGGTGT+GGG + chr1_1:11678666-11678685 Msa0008080:CDS 60.0%
!! CAGAGGTGTGGGTGCTGGTT+TGG + chr1_1:11678677-11678696 Msa0008080:CDS 60.0%
GGAACGCCACACTGCTTCCT+TGG - chr1_1:11678792-11678811 None:intergenic 60.0%
CAGGGAGAGGTCACTCTTGC+TGG + chr1_1:11678946-11678965 Msa0008080:intron 60.0%
GTGGGTGGAGTAGTGAGCAC+AGG + chr1_1:11679705-11679724 Msa0008080:intron 60.0%
GGTGGAGTAGTGAGCACAGG+TGG + chr1_1:11679708-11679727 Msa0008080:intron 60.0%
GAGTAGTGAGCACAGGTGGC+AGG + chr1_1:11679712-11679731 Msa0008080:intron 60.0%
!! TGGTCGAGTTGTCGGTGTCG+TGG - chr1_1:11681404-11681423 None:intergenic 60.0%
AAGGGGGCTTAATGCCCTGG+TGG - chr1_1:11681527-11681546 None:intergenic 60.0%
ATGGGGGCTTAATGCCCGAC+AGG - chr1_1:11681569-11681588 None:intergenic 60.0%
TGGACGAAGAACGCGGCTGT+TGG - chr1_1:11682622-11682641 None:intergenic 60.0%
TGACGAAGCTGATGCCGGTG+AGG + chr1_1:11683461-11683480 Msa0008080:CDS 60.0%
GAGCGCACCCATTCTCCTCT+GGG - chr1_1:11684605-11684624 None:intergenic 60.0%
AGAGCGCACCCATTCTCCTC+TGG - chr1_1:11684606-11684625 None:intergenic 60.0%
CCTGGCGAGTCAATGGAAGC+AGG - chr1_1:11684847-11684866 None:intergenic 60.0%
!! CCTGCTTCCATTGACTCGCC+AGG + chr1_1:11684844-11684863 Msa0008080:intron 60.0%
CCTCCACGCCTTCAGACACA+TGG - chr1_1:11687678-11687697 None:intergenic 60.0%
! CCATGTGTCTGAAGGCGTGG+AGG + chr1_1:11687675-11687694 Msa0008080:CDS 60.0%
! TTGTGCCACTGGTGGTCAGC+TGG + chr1_1:11688476-11688495 Msa0008080:CDS 60.0%
ATTGGGGTCGTTGCCCTCCT+TGG + chr1_1:11689962-11689981 Msa0008080:CDS 60.0%
TTGGTCGGCAGGGATGGGAA+AGG - chr1_1:11690032-11690051 None:intergenic 60.0%
! ACAAGGACAGCATCGGGCCA+TGG + chr1_1:11690877-11690896 Msa0008080:CDS 60.0%
! CAAGGACAGCATCGGGCCAT+GGG + chr1_1:11690878-11690897 Msa0008080:CDS 60.0%
GAACGGTCTCACGAAGCCCA+TGG - chr1_1:11690897-11690916 None:intergenic 60.0%
!! GGCATAAGGGCACCCCACGA+TGG + chr1_1:11673582-11673601 Msa0008080:CDS 65.0%
CGGGTCTCTGTTAGGCGGCT+TGG + chr1_1:11676300-11676319 Msa0008080:CDS 65.0%
GGCTGTAGGGGACAGAGGTG+TGG + chr1_1:11678665-11678684 Msa0008080:CDS 65.0%
GTGAGCACAGGTGGCAGGGA+CGG + chr1_1:11679717-11679736 Msa0008080:intron 65.0%
GGGACGGATGCAGGTGCACA+AGG + chr1_1:11679733-11679752 Msa0008080:intron 65.0%
GCGAAGGGGGCTTAATGCCC+TGG - chr1_1:11681530-11681549 None:intergenic 65.0%
GTGGTCGGGAGGAGAGACCC+CGG - chr1_1:11670938-11670957 None:intergenic 70.0%
! GGGGACAGAGGTGTGGGTGC+TGG + chr1_1:11678672-11678691 Msa0008080:CDS 70.0%
CAGGTGGCAGGGACGGATGC+AGG + chr1_1:11679724-11679743 Msa0008080:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 11669570 11691923 11669570 ID=Msa0008080;Name=Msa0008080
chr1_1 mRNA 11669570 11691923 11669570 ID=Msa0008080-mRNA-1;Parent=Msa0008080;Name=Msa0008080-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.38|0.31|0.94|1|1|35|0|1486
chr1_1 exon 11669570 11669914 11669570 ID=Msa0008080-mRNA-1:exon:4306;Parent=Msa0008080-mRNA-1
chr1_1 exon 11671212 11671298 11671212 ID=Msa0008080-mRNA-1:exon:4307;Parent=Msa0008080-mRNA-1
chr1_1 exon 11671389 11671444 11671389 ID=Msa0008080-mRNA-1:exon:4308;Parent=Msa0008080-mRNA-1
chr1_1 exon 11671983 11672066 11671983 ID=Msa0008080-mRNA-1:exon:4309;Parent=Msa0008080-mRNA-1
chr1_1 exon 11672810 11672882 11672810 ID=Msa0008080-mRNA-1:exon:4310;Parent=Msa0008080-mRNA-1
chr1_1 exon 11673206 11673261 11673206 ID=Msa0008080-mRNA-1:exon:4311;Parent=Msa0008080-mRNA-1
chr1_1 exon 11673368 11673476 11673368 ID=Msa0008080-mRNA-1:exon:4312;Parent=Msa0008080-mRNA-1
chr1_1 exon 11673573 11673638 11673573 ID=Msa0008080-mRNA-1:exon:4313;Parent=Msa0008080-mRNA-1
chr1_1 exon 11674452 11674538 11674452 ID=Msa0008080-mRNA-1:exon:4314;Parent=Msa0008080-mRNA-1
chr1_1 exon 11674735 11674785 11674735 ID=Msa0008080-mRNA-1:exon:4315;Parent=Msa0008080-mRNA-1
chr1_1 exon 11675779 11675896 11675779 ID=Msa0008080-mRNA-1:exon:4316;Parent=Msa0008080-mRNA-1
chr1_1 exon 11676063 11676124 11676063 ID=Msa0008080-mRNA-1:exon:4317;Parent=Msa0008080-mRNA-1
chr1_1 exon 11676219 11676347 11676219 ID=Msa0008080-mRNA-1:exon:4318;Parent=Msa0008080-mRNA-1
chr1_1 exon 11677281 11677377 11677281 ID=Msa0008080-mRNA-1:exon:4319;Parent=Msa0008080-mRNA-1
chr1_1 exon 11677463 11677497 11677463 ID=Msa0008080-mRNA-1:exon:4320;Parent=Msa0008080-mRNA-1
chr1_1 exon 11678599 11678880 11678599 ID=Msa0008080-mRNA-1:exon:4321;Parent=Msa0008080-mRNA-1
chr1_1 exon 11683189 11683264 11683189 ID=Msa0008080-mRNA-1:exon:4322;Parent=Msa0008080-mRNA-1
chr1_1 exon 11683358 11683543 11683358 ID=Msa0008080-mRNA-1:exon:4323;Parent=Msa0008080-mRNA-1
chr1_1 exon 11683831 11683989 11683831 ID=Msa0008080-mRNA-1:exon:4324;Parent=Msa0008080-mRNA-1
chr1_1 exon 11684473 11684494 11684473 ID=Msa0008080-mRNA-1:exon:4325;Parent=Msa0008080-mRNA-1
chr1_1 exon 11684590 11684707 11684590 ID=Msa0008080-mRNA-1:exon:4326;Parent=Msa0008080-mRNA-1
chr1_1 exon 11685795 11685904 11685795 ID=Msa0008080-mRNA-1:exon:4327;Parent=Msa0008080-mRNA-1
chr1_1 exon 11686059 11686239 11686059 ID=Msa0008080-mRNA-1:exon:4328;Parent=Msa0008080-mRNA-1
chr1_1 exon 11686320 11686428 11686320 ID=Msa0008080-mRNA-1:exon:4329;Parent=Msa0008080-mRNA-1
chr1_1 exon 11686525 11686619 11686525 ID=Msa0008080-mRNA-1:exon:4330;Parent=Msa0008080-mRNA-1
chr1_1 exon 11687655 11687753 11687655 ID=Msa0008080-mRNA-1:exon:4331;Parent=Msa0008080-mRNA-1
chr1_1 exon 11687928 11687994 11687928 ID=Msa0008080-mRNA-1:exon:4332;Parent=Msa0008080-mRNA-1
chr1_1 exon 11688279 11688364 11688279 ID=Msa0008080-mRNA-1:exon:4333;Parent=Msa0008080-mRNA-1
chr1_1 exon 11688465 11688746 11688465 ID=Msa0008080-mRNA-1:exon:4334;Parent=Msa0008080-mRNA-1
chr1_1 exon 11688818 11688958 11688818 ID=Msa0008080-mRNA-1:exon:4335;Parent=Msa0008080-mRNA-1
chr1_1 exon 11689265 11689283 11689265 ID=Msa0008080-mRNA-1:exon:4336;Parent=Msa0008080-mRNA-1
chr1_1 exon 11689825 11690011 11689825 ID=Msa0008080-mRNA-1:exon:4337;Parent=Msa0008080-mRNA-1
chr1_1 exon 11690374 11690568 11690374 ID=Msa0008080-mRNA-1:exon:4338;Parent=Msa0008080-mRNA-1
chr1_1 exon 11690738 11691055 11690738 ID=Msa0008080-mRNA-1:exon:4339;Parent=Msa0008080-mRNA-1
chr1_1 exon 11691650 11691923 11691650 ID=Msa0008080-mRNA-1:exon:4340;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11669570 11669914 11669570 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11671212 11671298 11671212 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11671389 11671444 11671389 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11671983 11672066 11671983 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11672810 11672882 11672810 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11673206 11673261 11673206 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11673368 11673476 11673368 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11673573 11673638 11673573 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11674452 11674538 11674452 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11674735 11674785 11674735 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11675779 11675896 11675779 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11676063 11676124 11676063 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11676219 11676347 11676219 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11677281 11677377 11677281 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11677463 11677497 11677463 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11678599 11678880 11678599 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11683189 11683264 11683189 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11683358 11683543 11683358 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11683831 11683989 11683831 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11684473 11684494 11684473 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11684590 11684707 11684590 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11685795 11685904 11685795 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11686059 11686239 11686059 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11686320 11686428 11686320 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11686525 11686619 11686525 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11687655 11687753 11687655 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11687928 11687994 11687928 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11688279 11688364 11688279 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11688465 11688746 11688465 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11688818 11688958 11688818 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11689265 11689283 11689265 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11689825 11690011 11689825 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11690374 11690568 11690374 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11690738 11691055 11690738 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
chr1_1 CDS 11691650 11691923 11691650 ID=Msa0008080-mRNA-1:cds;Parent=Msa0008080-mRNA-1
Gene Sequence

>Msa0008080

ATGGAAGGGGGAATGATTAAACCCCCTCCTAAAAAACGAAAAGTGATGATGATGACAACCAACAACGATGGTAAAGATATTCGTCGAGTTGTTCCAAGAATAATAATAAGTTTCAAAGTGTTGTTACCGAATGCAGCAATTGTGGAACTGAAAGTTCCGATTCCAGATAAAAATGAAATGCTGTTTGGGGAATTTCTTGGTTTAGTTCGAAGTAGGTATTTGAAAATTCGGGAAAACTCCAAATCCATGAAGAAGAAAAGTGAAATCAATTGGAACTGTGATGATTTGTTTCTTGAAGATGCCAATGATAACAAGATCAAGGATGTTGTTGATTTCAGAAACTTCAATATGTGGGACTTGACACCAGATACAGATCTGCTAATGGAGCTTCCTGAAGATTATAATTTTGAAGCGGCTATTACTGACTTGATTGATAATGCTTTGCAAGCTGTGTGGTTCAACGGGAAAGATAACAGGAAGCTAATCGGAGTAAATGTGAGTAACAAGAAGATTACAATTTTTGACAGTGGGTCTGGAATGGATGACTCAGATGAGAATTCCATCGTAAAATGGGGAAAGATGGGTGCTTCCCTTCACCGACAATCAAAATCACAGGCTATTGGAGGAAAACCGCCATACCTAATGCCTTGTTTTGGAATGTTTGGATATGGGGGACCTATAGCATCTATGCATCTGGGGAGGTCTACCCGTGTTTCTTCCAAGACAAAGCATGTAAAGAAAGTCTACGAGTTATGGCTTGAGAGAGAAGCTTTGTTAAATAATAAATCTAACTCTGAATCCACATGGAAGACATATGGTGGCATAAGGGCACCCCACGATGGTGAAGTCGAGAATTCTAGAGGCAGCTTTACAAAGGTTGATATTTATAACCCAAAAGTGAAAGATGTTGATATTAAGAAACTCCTGTGCCACCTCAAGGACATATACTTCCCCTACATTCAGAATGATGACTTGTCTGACAAAGGGAGGACTATCACACCAATTGAATTTCAGATCAACGGTGTTAATCTAACAGAGATTCGAGGCGGGGAGGTTGCAACCACCAATTTGCATTCTTGCAATGGTCCTGAATTTGTTCTGCAGATTCAGATGTCTTATAATCAAGACCATGGTTCAAGGGAATCCAAAGAAGCAAATGCACGCCTTAGATTTGTATATTTCCCTTTCACAAAGGGAAAGGAGAGTATTGAGAGAATTTTGGAAACTTTGAAGGATGACGGTCATATTATAAAAGAAAACTTCCAAAACTTTAGTCGGGTCTCTGTTAGGCGGCTTGGTCGTCTCCTTCCAGATGCTCGCTGGGCTTTCCTTCCTTTTATGGACTTAAGGAACAAAAGAGTAACTAGTAATACGACGAGCATATTGAAGAGATGTTCGTTGAGGGTAAAATGCTATGTCGAAACTGATGCCGGTTTTAAGCCTACACAGTCAAAGCACTCCTATTATTTTCCTGTGATGAGTGGAATCTGTGGTAGGAGTTCCATCATTCAGAGTGAGTGTGGCTGTAGGGGACAGAGGTGTGGGTGCTGGTTTGGCGCTAGCCATGTCAAACTTCTCAAGGACTTCTTGGTTGAATCTATGTTGAGACAACAGCATACCCTTGTTTGTTGGGATGAGTTCAATACCAAGGAAGCAGTGTGGCGTTCCCATGTTCTTAAGAGAAAATCTATTGGAAATGGAGTGAATAAAGTCGTGTATGAATTGGGCATCATTACTACGGATTTAGCTCACCAGAATCCTTTTACCATTGCTTTGAAGAACTTGGGCTGTAAAATTTCAGATAAACAGACCGCAGATGTTTCCGTCAAAATTAGCACGGCGACAAAAATATTAACTCCTTCACAAATAGAACAAGAATACCATGAATGGATATTAGAAATGCACAGACAATATGATGACGAAGCTGATGCCGGTGAGGATAAGCCAGTTATAGTTGTCAATCCACCGAACAAGGAAGCACTTGGCATTTCTGAAGATGTCATTAGAGTTCATCGGGTTCTGAAGAGAAAGGAGAAGTCTTGGAGTCATGGACAAAAAATAAAAGTGTTAAGGGGAGCATGTTCAGGGTTTCACTACAGCGATGTTTATGCAACCATAGAGTACTTTTTGCTTGAAGGTTTTGAAGGAGACCTGGGTGGAGAAGCTCGGATCATATGCAGGCCAATAGATATCCCAGAGGAGAATGGGTGCGCTCTTGATGTCAGTAATGAAGAAAACCCCACCTTGAATATCAGTAGCTCTTTGTCTTTACCTATAAGCGTGATCGACACCGAAAAGGTGGACTCAATCAGTAGAAGTGTCGACAAAAGAATGACAGTGAAACGTATTCATTGTGCTTGGAAGTACAAACTTCTAACTAATGACCAATGTCAAGAGCTTGATGTCAGGGTTGGTTCTACCTTTCCATCCTTAGCCATTGCATGTTATGACATCCATGACAATCGAGCTCCGTTTAAAAAAATTCCGGATGACGTGACTGTTGAACTTCAGGCAGCAAAAGACTTGTATTTCAAAGTGCATGGAACAAAGACTCGCCTCTCATTTGATAAAATGACTTTAAAAATTATGGATGCAATGATTACAAGTAGTGAATTGGACAAGATAAGGCCCAGCTATAGAACTACTTTGATTATTGCTTCAGAAAATGTTCCGTTTTCAGTATCTTTTCCGTGTCGAGTTTCTCCTGGTTATCTCGAATATGCTAAACTGAAGCCTAATATAAGAGAAGACCAACTACTTCCGGGTTTCATTTTCAAGGAGTTAGCGTTTGAGATGTTTGATACATATAGAAACCATGTGTCTGAAGGCGTGGAGGTTAATATTCTTTTGGAAGGATTTGAAAGGTTAAATAATTGCAGTACTGTATACAAGGTAGATGATAAAGGAAAAATTGATCTTGGTGGTCAACTAAAGTTAACAGCAGGTTTTGGAGAAAATGCATCCATATCTGTTATGTTCGAAGGTAAACCAAAATTCAGGCAGGAGTTTTCACTTGCACGAAGAATCTTGCGAATCGCATCTGAGGTGCCTGATTTTTGTGCCACTGGTGGTCAGCTGGAAAACATTGAATTTGAAATTGTCAATGCTGATGGAGATGTAGATATGAAGATTCATTATGACGATCAAGAATGCCAGTTTCATATGCTTACAATTAAATCGGGCCTTTCTAATGCAGATGAATCGATACGGTACACTTTTAAGCATGGACGATGTACAGTTCCATCTATTCGTGTTCCAGAAATTGAGGGGACCTTTTGCTTTGAAGCTTCTCATTCGCAGTATACAGAGCTGTGTCTGACTGCAAAGGTTCAAGTTATCAAAATGTCCAATGCGAAAGATGTTGCACAACATCTATCCCCGGATAAGAATACTTTCCCCCTGAAGGAACTATCAACTCTTACTCATGACAATAATCTAATGATCTCTGTCCTCAATAGCGATGGCAAGATTAATGACTTTGAACTTGGCAATGCCGACTTGTTGTTTGCCACCACCAAAGAAGAAATGACTACAAAAATTAAAAACATGGAAAACTCAGCAGCTTCTGTCCTATGTAGTCTCTCTGCACGTGAAAAGCAACAGAATCACTTCTTGGAAGATATAATTGGGGTCGTTGCCCTCCTTGGTTCTGTTCAGAATCCTGAGCTTAGCAGAATGTTAGCGGAATATCTTGGTGAAGATCAAATGCTGGGTGTTATTTGTAGATCTTTGGATACTGCAATTTCTCTTGAAAAATATAAACAAAATGGAGAAATTGATTATGTGCATGCTTTGCATGCTGCTGAAGCAGCTAATCTTGGAAAAGCTATAAGCAAACGTTTTCATGTTATGGGTTTTGAAGATATAAGGCCATATGATGGGAACTTGCAAAATGACTCTCAGAGAAAGCTTGCATTGCCCGATCCAAAGTTATCAAATAGGAGAACGCCAGAAGGCTTTATGGGTTATGCAGTTAATATGATTGATCTTGATTCCCATCACCTAGAGACAAGGACAGCATCGGGCCATGGGCTTCGTGAGACCGTTCTATTTAGCCTTTTCAAGAAGCTCCATGTTTACAAAACAAGCAAGAGTATGATGGCTGCTATTGAATGTATAGAGAATGGTGCTGTATCATTAGATGGCGGCATTATAAGAGAAAATGGAACTCTTTCTCTTGGCTTTGGGAATCCTTGCATATATTTTCCTTGTGGGAGCAAGATGGATATTCCTCCAGAAGCTACGCAAATGTTGAATCAGATTGAAGAAAAGAAAGCATTACTACTGAAGATTGAAAAAGGTGGTAAAAAAGTAACTAAACATCTGAAGAAGTCTCGAGAAAAGTTCAAGAAAAAAGAATCGAGATATAAAAAACATATGGATACAACAATGAAGCCTTTTGCTGAGGCATTGGAACAAAATCCAGAGATTGGGACACCTATGCTAGACTTAGGAGATTGA
Protein sequence

>Msa0008080

MEGGMIKPPPKKRKVMMMTTNNDGKDIRRVVPRIIISFKVLLPNAAIVELKVPIPDKNEMLFGEFLGLVRSRYLKIRENSKSMKKKSEINWNCDDLFLEDANDNKIKDVVDFRNFNMWDLTPDTDLLMELPEDYNFEAAITDLIDNALQAVWFNGKDNRKLIGVNVSNKKITIFDSGSGMDDSDENSIVKWGKMGASLHRQSKSQAIGGKPPYLMPCFGMFGYGGPIASMHLGRSTRVSSKTKHVKKVYELWLEREALLNNKSNSESTWKTYGGIRAPHDGEVENSRGSFTKVDIYNPKVKDVDIKKLLCHLKDIYFPYIQNDDLSDKGRTITPIEFQINGVNLTEIRGGEVATTNLHSCNGPEFVLQIQMSYNQDHGSRESKEANARLRFVYFPFTKGKESIERILETLKDDGHIIKENFQNFSRVSVRRLGRLLPDARWAFLPFMDLRNKRVTSNTTSILKRCSLRVKCYVETDAGFKPTQSKHSYYFPVMSGICGRSSIIQSECGCRGQRCGCWFGASHVKLLKDFLVESMLRQQHTLVCWDEFNTKEAVWRSHVLKRKSIGNGVNKVVYELGIITTDLAHQNPFTIALKNLGCKISDKQTADVSVKISTATKILTPSQIEQEYHEWILEMHRQYDDEADAGEDKPVIVVNPPNKEALGISEDVIRVHRVLKRKEKSWSHGQKIKVLRGACSGFHYSDVYATIEYFLLEGFEGDLGGEARIICRPIDIPEENGCALDVSNEENPTLNISSSLSLPISVIDTEKVDSISRSVDKRMTVKRIHCAWKYKLLTNDQCQELDVRVGSTFPSLAIACYDIHDNRAPFKKIPDDVTVELQAAKDLYFKVHGTKTRLSFDKMTLKIMDAMITSSELDKIRPSYRTTLIIASENVPFSVSFPCRVSPGYLEYAKLKPNIREDQLLPGFIFKELAFEMFDTYRNHVSEGVEVNILLEGFERLNNCSTVYKVDDKGKIDLGGQLKLTAGFGENASISVMFEGKPKFRQEFSLARRILRIASEVPDFCATGGQLENIEFEIVNADGDVDMKIHYDDQECQFHMLTIKSGLSNADESIRYTFKHGRCTVPSIRVPEIEGTFCFEASHSQYTELCLTAKVQVIKMSNAKDVAQHLSPDKNTFPLKELSTLTHDNNLMISVLNSDGKINDFELGNADLLFATTKEEMTTKIKNMENSAASVLCSLSAREKQQNHFLEDIIGVVALLGSVQNPELSRMLAEYLGEDQMLGVICRSLDTAISLEKYKQNGEIDYVHALHAAEAANLGKAISKRFHVMGFEDIRPYDGNLQNDSQRKLALPDPKLSNRRTPEGFMGYAVNMIDLDSHHLETRTASGHGLRETVLFSLFKKLHVYKTSKSMMAAIECIENGAVSLDGGIIRENGTLSLGFGNPCIYFPCGSKMDIPPEATQMLNQIEEKKALLLKIEKGGKKVTKHLKKSREKFKKKESRYKKHMDTTMKPFAEALEQNPEIGTPMLDLGD*