AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0487310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487310 MtrunA17_Chr1g0147011 71.037 984 247 17 1 967 500 1462 0.0 1353
Msa0487310 MtrunA17_Chr1g0146991 91.414 594 35 4 389 967 1 593 0.0 1083
Msa0487310 MtrunA17_Chr1g0146971 95.775 142 5 1 1 142 5 145 4.34e-90 283
Msa0487310 MtrunA17_Chr1g0146981 89.583 144 15 0 246 389 2 145 3.73e-85 270
Msa0487310 MtrunA17_Chr7g0275811 39.597 298 159 7 620 897 43 339 6.31e-60 209
Msa0487310 MtrunA17_Chr3g0126881 34.447 389 204 10 612 958 49 428 1.07e-56 202
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487310 AT5G24280.2 32.683 820 476 17 180 938 754 1558 8.69e-117 392
Msa0487310 AT5G24280.2 48.826 213 107 2 1 212 488 699 1.59e-58 220
Msa0487310 AT5G24280.3 32.683 820 476 17 180 938 754 1558 8.69e-117 392
Msa0487310 AT5G24280.3 48.826 213 107 2 1 212 488 699 1.59e-58 220
Msa0487310 AT5G24280.1 32.683 820 476 17 180 938 786 1590 1.65e-116 392
Msa0487310 AT5G24280.1 48.826 213 107 2 1 212 520 731 1.68e-58 220
Msa0487310 AT5G24275.2 34.644 534 284 14 342 840 99 602 2.50e-82 278
Msa0487310 AT5G24275.1 34.644 534 284 14 342 840 304 807 8.34e-81 280
Msa0487310 AT5G24275.3 34.286 455 234 14 421 840 6 430 6.90e-67 231
Msa0487310 AT5G24275.4 34.286 455 234 14 421 840 6 430 6.90e-67 231
Msa0487310 AT3G49250.1 37.943 282 155 5 613 875 59 339 5.41e-50 183

Find 172 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACTCCTGCCTGAATTT+TGG 0.154170 3_4:+6066406 None:intergenic
CAAAAGGTCCCCTCAATTTC+TGG 0.157458 3_4:+6066039 None:intergenic
CACTTCTTGGAAGATATAAT+TGG 0.178304 3_4:-6064734 Msa0487310:CDS
GAGAACGCCAGAAGGCTTTA+TGG 0.220992 3_4:-6063868 Msa0487310:CDS
TAGCTGTTGATAATATTAAA+TGG 0.268635 3_4:-6069924 Msa0487310:CDS
GAACTCTTTCTCTTGGCTTT+GGG 0.273909 3_4:-6063644 Msa0487310:intron
TTCTTCAAAGCAATGGTAAA+AGG 0.274323 3_4:+6071504 None:intergenic
TCGGTGTCGATCACGCTTAT+AGG 0.275828 3_4:+6070031 None:intergenic
CGTGGAGGTTAATATTCTTT+TGG 0.285939 3_4:-6067024 Msa0487310:CDS
GTGTTAAGGGGAGCATGTTC+AGG 0.289144 3_4:-6070818 Msa0487310:CDS
GGAACTCTTTCTCTTGGCTT+TGG 0.301870 3_4:-6063645 Msa0487310:CDS
GGGTGTTATTTGTAGATCTT+TGG 0.303791 3_4:-6064268 Msa0487310:CDS
TTCAACATTTGCGTAGCTTC+TGG 0.316994 3_4:+6062982 None:intergenic
GGCGGCATTATAAGAGAAAA+TGG 0.319270 3_4:-6063666 Msa0487310:CDS
AGTTGGTCTTCTCTTATATT+AGG 0.324131 3_4:+6068154 None:intergenic
CAACGTGCTTTCGTTTATAC+TGG 0.328799 3_4:+6069839 None:intergenic
CTAAAGTTAACAGCAGGTTT+TGG 0.328837 3_4:-6066750 Msa0487310:CDS
TCATATGCTTACAATTAAAT+CGG 0.329243 3_4:-6066136 Msa0487310:CDS
TTCTCCTCTGGGATATCTAT+TGG 0.340662 3_4:+6070121 None:intergenic
TTACTACTGAAGATTGAAAA+AGG 0.344652 3_4:-6062937 Msa0487310:CDS
CCGATCCAAAGTTATCAAAT+AGG 0.350635 3_4:-6063890 Msa0487310:CDS
TACCATTGCTTTGAAGAACT+TGG 0.366945 3_4:-6071499 Msa0487310:CDS
AAGCAATGGTAAAAGGATTC+TGG 0.367642 3_4:+6071511 None:intergenic
AAAGCAACAGAATCACTTCT+TGG 0.370458 3_4:-6064747 Msa0487310:CDS
AAGAGAAGACCAACTACTTC+CGG 0.372390 3_4:-6068146 Msa0487310:CDS
GGTGGATTGACAACTATAAC+TGG 0.373256 3_4:+6071225 None:intergenic
CGTTTATACTGGTTTGTGCC+TGG 0.377283 3_4:+6069850 None:intergenic
ACTTCTTGGAAGATATAATT+GGG 0.379257 3_4:-6064733 Msa0487310:CDS
AGAACGCCAGAAGGCTTTAT+GGG 0.383529 3_4:-6063867 Msa0487310:intron
GATCTACAGGTAGATGATAA+AGG 0.383791 3_4:-6066795 Msa0487310:intron
GAAAATGGAACTCTTTCTCT+TGG 0.387527 3_4:-6063651 Msa0487310:CDS
ATGCCAAGTGCTTCCTTGTT+CGG 0.389709 3_4:+6071204 None:intergenic
GCATTTCTAATATCCATTCA+TGG 0.392415 3_4:+6071289 None:intergenic
TGCTAGACTTAGGAGATTGA+TGG 0.394563 3_4:-6062774 None:intergenic
TAAGAGTTGATAGTTCCTTC+AGG 0.395269 3_4:+6065825 None:intergenic
TTTGACGACATTTGCCAACT+TGG 0.396807 3_4:-6065332 Msa0487310:CDS
AGCATAGGTGTCCCAATCTC+TGG 0.399969 3_4:+6062793 None:intergenic
ACCTTCGAACATAACAGATA+TGG 0.401978 3_4:+6066432 None:intergenic
ATTTCTGGAACACGAATAGA+TGG 0.403991 3_4:+6066054 None:intergenic
TAATTGTAAGCATATGAAAC+TGG 0.404903 3_4:+6066142 None:intergenic
TCGAAGGTAAACCAAAATTC+AGG 0.410501 3_4:-6066417 Msa0487310:CDS
TGAAGAGAAAGGAGAAGTCT+TGG 0.412538 3_4:-6070862 Msa0487310:CDS
TTCAGAATCCTGAGCTTAGC+AGG 0.415233 3_4:-6064688 Msa0487310:intron
GCATAACCCATAAAGCCTTC+TGG 0.415293 3_4:+6063861 None:intergenic
TGACGTGACTGTTGAACTTC+AGG 0.416376 3_4:-6068574 Msa0487310:CDS
ATTGGGGTCGTTGCCCTCCT+TGG 0.419077 3_4:-6064716 Msa0487310:CDS
CTATTTGATAACTTTGGATC+GGG 0.419959 3_4:+6063891 None:intergenic
AGAGCGCACCCATTCTCCTC+TGG 0.422918 3_4:+6070109 None:intergenic
TGTAGTCATTTCTTCTTTGG+TGG 0.431659 3_4:+6064829 None:intergenic
TTGGAACAAAATCCAGAGAT+TGG 0.433347 3_4:-6062805 Msa0487310:CDS
AATGATTACAAGTAGTGAAT+TGG 0.434890 3_4:-6068389 Msa0487310:CDS
GCTGCTGAAGCAGCTAATCT+TGG 0.436687 3_4:-6064180 Msa0487310:CDS
AATGGTGCTGTATCATTAGA+TGG 0.437239 3_4:-6063687 Msa0487310:CDS
TTTCAAGGAGTTAGCGTTTG+AGG 0.438649 3_4:-6068116 Msa0487310:intron
TGTTCCAATGCCTCAGCAAA+AGG 0.439517 3_4:+6062820 None:intergenic
AATCAAAGTAGTTCTATAGC+TGG 0.442718 3_4:+6068354 None:intergenic
TGAAGTCATTAGAGTTCATC+GGG 0.443438 3_4:-6070888 Msa0487310:intron
ACAAGGACAGCATCGGGCCA+TGG 0.446135 3_4:-6063801 Msa0487310:CDS
CATATGCTTACAATTAAATC+GGG 0.450609 3_4:-6066135 Msa0487310:CDS
GTTCTCCTATTTGATAACTT+TGG 0.452254 3_4:+6063885 None:intergenic
AAACATGGAGCTTCTTGAAA+AGG 0.455518 3_4:+6063754 None:intergenic
AGAGAAGACCAACTACTTCC+GGG 0.458345 3_4:-6068145 Msa0487310:CDS
TTGTGCCACTGGTGGTCAGC+TGG 0.468884 3_4:-6066238 Msa0487310:CDS
AGTCATTTCTTCTTTGGTGG+TGG 0.469132 3_4:+6064832 None:intergenic
TAGAACAAGAATACCATGAA+TGG 0.469842 3_4:-6071302 Msa0487310:CDS
CTGTCCTTGTCTCTAGGTGA+TGG 0.479142 3_4:+6063814 None:intergenic
TATTCGTGTTCCAGAAATTG+AGG 0.479757 3_4:-6066049 Msa0487310:CDS
ACCATTGCTTTGAAGAACTT+GGG 0.479885 3_4:-6071498 Msa0487310:CDS
ATACCTTGCCATCGCTATTG+AGG 0.480638 3_4:+6065774 None:intergenic
GCACTTGGCATTTCTGAAGA+TGG 0.483183 3_4:-6071192 Msa0487310:intron
AGTTCAACAGTCACGTCATC+CGG 0.483607 3_4:+6068579 None:intergenic
CAAAGAGCTACTGATATTCA+AGG 0.484754 3_4:+6070060 None:intergenic
TAGATATCCCAGAGGAGAAT+GGG 0.487516 3_4:-6070117 Msa0487310:CDS
CAAGGACAGCATCGGGCCAT+GGG 0.488337 3_4:-6063800 Msa0487310:CDS
CCTGCTTCCATTGACTCGCC+AGG 0.488418 3_4:-6069868 Msa0487310:CDS
ATGAGAAGCTTCAAAGCAAA+AGG 0.489261 3_4:+6066023 None:intergenic
TTTGAAATTGTCAATGCTGA+TGG 0.489566 3_4:-6066204 Msa0487310:CDS
CCTATTTGATAACTTTGGAT+CGG 0.489733 3_4:+6063890 None:intergenic
TCATTTGACAGGCCATATGA+TGG 0.491198 3_4:-6063951 Msa0487310:intron
GTGAAGTCATTAGAGTTCAT+CGG 0.496698 3_4:-6070889 Msa0487310:intron
CCGATGCTGTCCTTGTCTCT+AGG 0.498998 3_4:+6063808 None:intergenic
TGGAACAAAATCCAGAGATT+GGG 0.504538 3_4:-6062804 Msa0487310:CDS
GTTTGTGCCTGGCGAGTCAA+TGG 0.504962 3_4:+6069861 None:intergenic
CCAAGTGCTTCCTTGTTCGG+TGG 0.505892 3_4:+6071207 None:intergenic
AAGCGTGATCGACACCGAAA+AGG 0.506735 3_4:-6070026 Msa0487310:intron
TGTTAAGGGGAGCATGTTCA+GGG 0.508251 3_4:-6070817 Msa0487310:CDS
AAGAGTTGATAGTTCCTTCA+GGG 0.511517 3_4:+6065826 None:intergenic
AAGGAGAAGTCTTGGAGTCA+TGG 0.515142 3_4:-6070854 Msa0487310:CDS
AGAATGTTAGCGGAATATCT+TGG 0.519099 3_4:-6064306 Msa0487310:CDS
TTGTGCAACATCTTTCGCAT+TGG 0.520629 3_4:+6065877 None:intergenic
CAAAACAAGCAAGAGTATGA+TGG 0.521624 3_4:-6063730 Msa0487310:CDS
GACTTGTATTTCAAAGTGCA+TGG 0.525063 3_4:-6068543 Msa0487310:CDS
TGAAACGTATTCATTGTGCT+TGG 0.527904 3_4:-6068879 Msa0487310:CDS
AATGTCAAGAGCTTGATGTC+AGG 0.535452 3_4:-6068831 Msa0487310:intron
ATCAAAGTAGTTCTATAGCT+GGG 0.536927 3_4:+6068355 None:intergenic
ATAGATATCCCAGAGGAGAA+TGG 0.537558 3_4:-6070118 Msa0487310:CDS
GTCATAACATGCAATGGCTA+AGG 0.538290 3_4:+6068635 None:intergenic
GGGACACCTATGCTAGACTT+AGG 0.539982 3_4:-6062784 Msa0487310:CDS
AAATGAAACCCGGAAGTAGT+TGG 0.542686 3_4:+6068137 None:intergenic
GAGCGCACCCATTCTCCTCT+GGG 0.543360 3_4:+6070110 None:intergenic
ATTCGTGTTCCAGAAATTGA+GGG 0.543848 3_4:-6066048 Msa0487310:CDS
TCGATTCATCTGCATTAGAA+AGG 0.544560 3_4:+6066112 None:intergenic
CACGGAAAAGATACTGAAAA+CGG 0.545180 3_4:+6068313 None:intergenic
TCCATATCTGTTATGTTCGA+AGG 0.546516 3_4:-6066433 Msa0487310:CDS
GAGAAGCTCGGATCATATGC+AGG 0.547744 3_4:-6070239 Msa0487310:intron
AGCTACTGATATTCAAGGTG+GGG 0.548390 3_4:+6070065 None:intergenic
CTAGAGACAAGGACAGCATC+GGG 0.549880 3_4:-6063807 Msa0487310:CDS
TCTTGGTGAAGATCAAATGC+TGG 0.550642 3_4:-6064289 Msa0487310:CDS
CCTGGCGAGTCAATGGAAGC+AGG 0.552118 3_4:+6069868 None:intergenic
TAAACGGAGCTCGATTGTCA+TGG 0.556220 3_4:+6068610 None:intergenic
CATTTGACAGGCCATATGAT+GGG 0.556751 3_4:-6063950 Msa0487310:intron
GCCCAAGTTCTTCAAAGCAA+TGG 0.557865 3_4:+6071497 None:intergenic
TAACATGCAATGGCTAAGGA+TGG 0.558634 3_4:+6068639 None:intergenic
GAGCTACTGATATTCAAGGT+GGG 0.560334 3_4:+6070064 None:intergenic
CCTCCACGCCTTCAGACACA+TGG 0.567717 3_4:+6067039 None:intergenic
CCTAGAGACAAGGACAGCAT+CGG 0.567982 3_4:-6063808 Msa0487310:CDS
TGTCCTTGTCTCTAGGTGAT+GGG 0.568195 3_4:+6063815 None:intergenic
TATTCTTGTTCTATTTGTGA+AGG 0.568352 3_4:+6071312 None:intergenic
AAACCATGTGTCTGAAGGCG+TGG 0.569571 3_4:-6067042 Msa0487310:CDS
CCACCGAACAAGGAAGCACT+TGG 0.570708 3_4:-6071207 Msa0487310:CDS
GTAGTGAATTGGACAAGATA+AGG 0.573215 3_4:-6068378 Msa0487310:CDS
TGCAATGGCTAAGGATGGAA+AGG 0.573670 3_4:+6068644 None:intergenic
CTTGAAAAGGCTAAATAGAA+CGG 0.573892 3_4:+6063767 None:intergenic
CAAGAGCTGTTGATGCTGCA+AGG 0.576166 3_4:-6065245 Msa0487310:intron
AGTTGTCAATCCACCGAACA+AGG 0.578580 3_4:-6071217 Msa0487310:CDS
ATCTCTGTCCTCAATAGCGA+TGG 0.578829 3_4:-6065782 Msa0487310:CDS
TCATCGGGTTCTGAAGAGAA+AGG 0.580117 3_4:-6070873 Msa0487310:CDS
TGTTGATAATATTAAATGGA+AGG 0.581075 3_4:-6069920 Msa0487310:CDS
TTGACAAACCTGCTAAGCTC+AGG 0.581495 3_4:+6064680 None:intergenic
AACATTTGCGTAGCTTCTGG+AGG 0.585146 3_4:+6062985 None:intergenic
GGTCAACTAAAGTTAACAGC+AGG 0.589570 3_4:-6066756 Msa0487310:CDS
GCTATTGAATGTATAGAGAA+TGG 0.595546 3_4:-6063705 Msa0487310:CDS
CCACAAGGAAAATATATGCA+AGG 0.599117 3_4:+6063024 None:intergenic
AGGTAAACCAAAATTCAGGC+AGG 0.600747 3_4:-6066413 Msa0487310:CDS
TAATTGCAGTACTGTATACA+AGG 0.601251 3_4:-6066982 Msa0487310:intron
TGACATCAAGCTCTTGACAT+TGG 0.603498 3_4:+6068833 None:intergenic
CTAATGCAGATGAATCGATA+CGG 0.604094 3_4:-6066107 Msa0487310:CDS
CAATCTCCTAAGTCTAGCAT+AGG 0.607643 3_4:+6062778 None:intergenic
TATAGAAACCATGTGTCTGA+AGG 0.607775 3_4:-6067047 Msa0487310:CDS
AAAATTTCAGATAAACAGAC+CGG 0.608599 3_4:-6071471 Msa0487310:intron
TTAGCATATTCGAGATAACC+AGG 0.610969 3_4:+6068184 None:intergenic
TATGATGACGAAGCTGATGC+CGG 0.618739 3_4:-6071258 Msa0487310:CDS
TGTCCTCAATAGCGATGGCA+AGG 0.619932 3_4:-6065777 Msa0487310:intron
TGTTGCACAACATCTATCCC+CGG 0.620409 3_4:-6065864 Msa0487310:CDS
ATTCTGAACAGAACCAAGGA+GGG 0.629386 3_4:+6064703 None:intergenic
AACTCCTTGAAAATGAAACC+CGG 0.629390 3_4:+6068127 None:intergenic
GAACGGTCTCACGAAGCCCA+TGG 0.630143 3_4:+6063784 None:intergenic
ATATCCATCTTGCTCCCACA+AGG 0.630443 3_4:+6063009 None:intergenic
AATCTTGCGAATCGCATCTG+AGG 0.630729 3_4:-6066371 Msa0487310:intron
TCAAATAGGAGAACGCCAGA+AGG 0.635926 3_4:-6063876 Msa0487310:CDS
TGTTTCCGTCAAAATTAGCA+CGG 0.639859 3_4:-6071352 Msa0487310:CDS
AGAGCTGTGTCTGACTGCAA+AGG 0.640595 3_4:-6065989 Msa0487310:intron
CAATCAAAATCACCTCGACA+CGG 0.641182 3_4:+6068295 None:intergenic
TATAACTGGCTTATCCTCAC+CGG 0.643304 3_4:+6071239 None:intergenic
TTCGTGTTCCAGAAATTGAG+GGG 0.644094 3_4:-6066047 Msa0487310:CDS
CCATGTGTCTGAAGGCGTGG+AGG 0.644668 3_4:-6067039 Msa0487310:CDS
ATGGATGTCATAACATGCAA+TGG 0.648753 3_4:+6068629 None:intergenic
AGAGTTGATAGTTCCTTCAG+GGG 0.649868 3_4:+6065827 None:intergenic
AGAGCTACTGATATTCAAGG+TGG 0.651618 3_4:+6070063 None:intergenic
CTTGGTGAAGATCAAATGCT+GGG 0.652340 3_4:-6064288 Msa0487310:CDS
GAGTTGATAGTTCCTTCAGG+GGG 0.653915 3_4:+6065828 None:intergenic
CTTCTTGGAAGATATAATTG+GGG 0.656471 3_4:-6064732 Msa0487310:CDS
GGTGGTGGCAAACAACAAGT+CGG 0.673922 3_4:+6064847 None:intergenic
GATTCTGAACAGAACCAAGG+AGG 0.680382 3_4:+6064702 None:intergenic
CAGGATTCTGAACAGAACCA+AGG 0.684171 3_4:+6064699 None:intergenic
ATTCCCATCACCTAGAGACA+AGG 0.688226 3_4:-6063818 Msa0487310:CDS
ATTCAGGAATCTTACCACCC+AGG 0.699327 3_4:+6070732 None:intergenic
TGACGAAGCTGATGCCGGTG+AGG 0.712253 3_4:-6071253 Msa0487310:CDS
GGGGAAAGTATTCTTATCCG+GGG 0.712971 3_4:+6065847 None:intergenic
CACGTGCAGAGAGACTACAT+AGG 0.722422 3_4:+6064771 None:intergenic
GGTGCTGTATCATTAGATGG+CGG 0.731976 3_4:-6063684 Msa0487310:CDS
CAGGCCAATAGATATCCCAG+AGG 0.793787 3_4:-6070125 Msa0487310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATATTAATTATTTACAT+GGG + chr3_4:6064905-6064924 None:intergenic 10.0%
!! ATGTATATTAATTATTTACA+TGG + chr3_4:6064906-6064925 None:intergenic 10.0%
!!! TAAAATGACTTTAAAAATTA+TGG - chr3_4:6065806-6065825 Msa0487310:CDS 10.0%
!! CAAATAAATCTTAAAATATT+TGG + chr3_4:6066500-6066519 None:intergenic 10.0%
!!! ATATTTTAAGATTTATTTGT+TGG - chr3_4:6066501-6066520 Msa0487310:intron 10.0%
!!! TATTTTAAGATTTATTTGTT+GGG - chr3_4:6066502-6066521 Msa0487310:intron 10.0%
!! AAATAGTAATAAAAAAGAAA+AGG - chr3_4:6066817-6066836 Msa0487310:intron 10.0%
!! ATCAAATTTAAATTTATAAC+AGG + chr3_4:6066962-6066981 None:intergenic 10.0%
!! AAATTCATGATATAAATTTA+AGG - chr3_4:6068627-6068646 Msa0487310:CDS 10.0%
!! TCATATTATAATCAAAATTA+CGG + chr3_4:6070225-6070244 None:intergenic 10.0%
!!! TTTTATAGATTTTTTTTTTG+AGG - chr3_4:6070260-6070279 Msa0487310:intron 10.0%
!! TTTGTATTTGTATTATATAT+AGG - chr3_4:6071210-6071229 Msa0487310:CDS 10.0%
!! TAAACTTATGAATGTATTAA+AGG + chr3_4:6063263-6063282 None:intergenic 15.0%
!!! ACAAAAAATAAAAGTGTTAA+GGG - chr3_4:6063471-6063490 Msa0487310:intron 15.0%
!! ATTATAAAAAGAAAGAGAAA+AGG + chr3_4:6063619-6063638 None:intergenic 15.0%
!! TTTATATTCTATTTCATTCT+AGG + chr3_4:6063644-6063663 None:intergenic 15.0%
!! TAGAATGAAATAGAATATAA+AGG - chr3_4:6063643-6063662 Msa0487310:intron 15.0%
!! TAATATTGAATGATATGAAA+TGG + chr3_4:6063776-6063795 None:intergenic 15.0%
!! TATTAATAAGTGAAAAAAAG+TGG - chr3_4:6063835-6063854 Msa0487310:CDS 15.0%
!!! ATAAGAAAAAAGAGTAATTT+TGG - chr3_4:6063891-6063910 Msa0487310:CDS 15.0%
!!! TGTTGTATATTTGTTTTATA+CGG - chr3_4:6064307-6064326 Msa0487310:CDS 15.0%
!! ATCAAATCATAACAAATATT+TGG + chr3_4:6064587-6064606 None:intergenic 15.0%
!!! AATATTTGTTATGATTTGAT+TGG - chr3_4:6064587-6064606 Msa0487310:intron 15.0%
!!! AAATAACTATTGTATTGTTT+TGG - chr3_4:6065871-6065890 Msa0487310:CDS 15.0%
!!! ATTTCATCAAACATTTTATT+TGG + chr3_4:6066396-6066415 None:intergenic 15.0%
!! TTCTTAAAAAAATTGATGTT+TGG + chr3_4:6066867-6066886 None:intergenic 15.0%
!! ACAAAGAATTAAAAAAACAT+AGG + chr3_4:6067072-6067091 None:intergenic 15.0%
!!! TGTTTTTTTAATTCTTTGTA+TGG - chr3_4:6067073-6067092 Msa0487310:intron 15.0%
!! ATATGTCAAATAGAAATATT+GGG + chr3_4:6067200-6067219 None:intergenic 15.0%
!! AATATGTCAAATAGAAATAT+TGG + chr3_4:6067201-6067220 None:intergenic 15.0%
!! CATTATTTAAATTTACTTCA+TGG - chr3_4:6067782-6067801 Msa0487310:intron 15.0%
!! TAAAAAAATTAATGAGCAAA+TGG - chr3_4:6069023-6069042 Msa0487310:intron 15.0%
!! CTTGAAAAATATAAACAAAA+TGG - chr3_4:6070071-6070090 Msa0487310:CDS 15.0%
!!! ACTAATACAATAGTTTTTTA+TGG - chr3_4:6071029-6071048 Msa0487310:intron 15.0%
!!! TAGTTTTTTATGGTTATTTT+CGG - chr3_4:6071039-6071058 Msa0487310:intron 15.0%
!! GATTTATAATCAGAAAATAC+CGG + chr3_4:6062853-6062872 None:intergenic 20.0%
!!! TATTTATGATTGTTGCTTTT+TGG - chr3_4:6063166-6063185 Msa0487310:intron 20.0%
!! ACATTCATAAGTTTATGATA+TGG - chr3_4:6063268-6063287 Msa0487310:intron 20.0%
!! AGAAAAATAGAATGAGAAAA+AGG + chr3_4:6063386-6063405 None:intergenic 20.0%
!!! GACAAAAAATAAAAGTGTTA+AGG - chr3_4:6063470-6063489 Msa0487310:intron 20.0%
!!! CAAAAAATAAAAGTGTTAAG+GGG - chr3_4:6063472-6063491 Msa0487310:intron 20.0%
!!! ACTAACTTCTCTTTTATTTA+TGG + chr3_4:6063816-6063835 None:intergenic 20.0%
!! AAAAAAAAAAACACTGAAAG+TGG + chr3_4:6064028-6064047 None:intergenic 20.0%
!!! AGGATTTATATGATTTTAGT+AGG + chr3_4:6064118-6064137 None:intergenic 20.0%
!!! ACAACAAAATTTAACCTTTT+CGG + chr3_4:6064293-6064312 None:intergenic 20.0%
!!! TAGCTGTTGATAATATTAAA+TGG - chr3_4:6064378-6064397 Msa0487310:intron 20.0%
!!! TGTTGATAATATTAAATGGA+AGG - chr3_4:6064382-6064401 Msa0487310:intron 20.0%
!! AATCATAACAAATATTTGGT+TGG + chr3_4:6064583-6064602 None:intergenic 20.0%
!! AGAATTCAACTCATATTTAA+AGG + chr3_4:6064661-6064680 None:intergenic 20.0%
!! ACCAATTTGTCTTATAAAAA+GGG - chr3_4:6064802-6064821 Msa0487310:CDS 20.0%
!! CTCAAAACAATAATTTACAA+AGG + chr3_4:6065319-6065338 None:intergenic 20.0%
!!! TTGTAAATTATTGTTTTGAG+TGG - chr3_4:6065319-6065338 Msa0487310:CDS 20.0%
!! AACAAAACAAAACTATTGAA+TGG - chr3_4:6066586-6066605 Msa0487310:intron 20.0%
!!! AAAAAATTCTGAAGTTATGT+AGG - chr3_4:6066885-6066904 Msa0487310:intron 20.0%
!! TAGATTCAAAATTCCATAAA+TGG + chr3_4:6066915-6066934 None:intergenic 20.0%
!! CATGAATACATAATGATTAA+AGG + chr3_4:6067016-6067035 None:intergenic 20.0%
!!! GAATTTTCATTTAACATATG+AGG + chr3_4:6067486-6067505 None:intergenic 20.0%
!!! TTTGAAGTTAAAGAGAATAA+TGG + chr3_4:6067700-6067719 None:intergenic 20.0%
!! TTTAAATAATGAACTAGTCA+TGG + chr3_4:6067773-6067792 None:intergenic 20.0%
!! TCATATGCTTACAATTAAAT+CGG - chr3_4:6068166-6068185 Msa0487310:CDS 20.0%
!! TGTCAGTTATGAATTATAAT+TGG - chr3_4:6068367-6068386 Msa0487310:CDS 20.0%
!! AACTGTTATTAATTGAAGAT+AGG - chr3_4:6069135-6069154 Msa0487310:intron 20.0%
!! GACTACAAAAATTAAAAACA+TGG - chr3_4:6069489-6069508 Msa0487310:intron 20.0%
!!! TTTTTTTTACAGAATGTTAG+CGG - chr3_4:6069986-6070005 Msa0487310:intron 20.0%
!!! TTTTTTTTGAGGAAAAACTA+TGG - chr3_4:6070271-6070290 Msa0487310:intron 20.0%
!!! TTTTTTTGAGGAAAAACTAT+GGG - chr3_4:6070272-6070291 Msa0487310:intron 20.0%
!! ATTAAAATGTACAAGTTTGA+AGG - chr3_4:6070934-6070953 Msa0487310:intron 20.0%
!! TTAAAATGTACAAGTTTGAA+GGG - chr3_4:6070935-6070954 Msa0487310:intron 20.0%
!!! AGTTTTTTATGGTTATTTTC+GGG - chr3_4:6071040-6071059 Msa0487310:intron 20.0%
!! ATCGAGATATAAAAAACATA+TGG - chr3_4:6071445-6071464 Msa0487310:intron 20.0%
! AAAATTTCAGATAAACAGAC+CGG - chr3_4:6062831-6062850 Msa0487310:CDS 25.0%
! TATTCTTGTTCTATTTGTGA+AGG + chr3_4:6062993-6063012 None:intergenic 25.0%
! AGGTTTATTTATTCCTTTGT+TGG + chr3_4:6063233-6063252 None:intergenic 25.0%
! TCATAAGTTTATGATATGGA+TGG - chr3_4:6063272-6063291 Msa0487310:intron 25.0%
!! ACTTCTTATTTACCTCTAAT+CGG + chr3_4:6063688-6063707 None:intergenic 25.0%
! CATTAGAAAAGAAAGAAAAC+CGG + chr3_4:6063864-6063883 None:intergenic 25.0%
!! ACTATAAATTAAGCTTTGAC+TGG - chr3_4:6063991-6064010 Msa0487310:intron 25.0%
! GTGAATATAGACAACTTTAT+AGG + chr3_4:6064138-6064157 None:intergenic 25.0%
!!! TGTATATTTGTTTTATACGG+TGG - chr3_4:6064310-6064329 Msa0487310:intron 25.0%
!! GATGTGGTAAGTATTTTATT+TGG - chr3_4:6064485-6064504 Msa0487310:intron 25.0%
! GTGTAAAAAGAATTTACACA+TGG + chr3_4:6064615-6064634 None:intergenic 25.0%
! ACAAAAAACAAAAAACTACC+AGG + chr3_4:6064721-6064740 None:intergenic 25.0%
! CACCAATTTGTCTTATAAAA+AGG - chr3_4:6064801-6064820 Msa0487310:CDS 25.0%
!! TCCCTTTTTATAAGACAAAT+TGG + chr3_4:6064806-6064825 None:intergenic 25.0%
! ACTTTCTTCTCTTATAAACA+AGG - chr3_4:6064951-6064970 Msa0487310:intron 25.0%
! CTTTCTTCTCTTATAAACAA+GGG - chr3_4:6064952-6064971 Msa0487310:intron 25.0%
!!! ATGTGACTTATTTTATGTCA+TGG + chr3_4:6065091-6065110 None:intergenic 25.0%
!!! GGTTAATGAAGATTTTTAGA+AGG + chr3_4:6065206-6065225 None:intergenic 25.0%
! AACAAATGATTTACTGTACA+GGG - chr3_4:6065626-6065645 Msa0487310:intron 25.0%
!!! TCATCCGGAATTTTTTTAAA+CGG + chr3_4:6065711-6065730 None:intergenic 25.0%
!!! AAGTCATTTTATCAAATGAG+AGG + chr3_4:6065797-6065816 None:intergenic 25.0%
! AATGATTACAAGTAGTGAAT+TGG - chr3_4:6065913-6065932 Msa0487310:intron 25.0%
!!! ATTTGTGTCATTTATTCATC+AGG - chr3_4:6066030-6066049 Msa0487310:CDS 25.0%
! ACCTAAAAGTAACACTATAT+GGG - chr3_4:6066291-6066310 Msa0487310:intron 25.0%
!!! TCTCATATAGTGTTACTTTT+AGG + chr3_4:6066350-6066369 None:intergenic 25.0%
! TAAAAGTAACACTATATGAG+AGG - chr3_4:6066349-6066368 Msa0487310:intron 25.0%
! AAAAGTAACACTATATGAGA+GGG - chr3_4:6066350-6066369 Msa0487310:intron 25.0%
!! TTAAGATTTATTTGTTGGGT+TGG - chr3_4:6066506-6066525 Msa0487310:intron 25.0%
! CAAAACTATTGAATGGTATA+TGG - chr3_4:6066593-6066612 Msa0487310:intron 25.0%
!! TGAATGGTATATGGATTAAA+TGG - chr3_4:6066602-6066621 Msa0487310:intron 25.0%
!! TGTTCTTTTGAATCAATCAA+CGG - chr3_4:6066640-6066659 Msa0487310:intron 25.0%
!!! AAAGCTTTGTTTCAATTTTC+TGG - chr3_4:6066702-6066721 Msa0487310:intron 25.0%
! TTATGTAGGTATACCATTTA+TGG - chr3_4:6066899-6066918 Msa0487310:intron 25.0%
! TGTATTCATGCAAAACAATT+TGG - chr3_4:6067026-6067045 Msa0487310:CDS 25.0%
! ATGTTAGAAACACAAATATG+TGG + chr3_4:6067145-6067164 None:intergenic 25.0%
! TTCTATATGTATCAAACATC+TGG + chr3_4:6067242-6067261 None:intergenic 25.0%
!! GGATAAATATTTTGCATTGA+TGG - chr3_4:6067373-6067392 Msa0487310:intron 25.0%
! TAACATATGAGGAAAAAACA+GGG + chr3_4:6067475-6067494 None:intergenic 25.0%
! TTAACATATGAGGAAAAAAC+AGG + chr3_4:6067476-6067495 None:intergenic 25.0%
! AAATGAAAATTCTGATCTAC+AGG - chr3_4:6067494-6067513 Msa0487310:intron 25.0%
! GATAAAGGAAAAATTGATCT+TGG - chr3_4:6067522-6067541 Msa0487310:intron 25.0%
!! CTTACAATTTGTTTGATTCA+TGG - chr3_4:6067615-6067634 Msa0487310:intron 25.0%
! AAAATTTAGATCTGTAGCTA+AGG + chr3_4:6067661-6067680 None:intergenic 25.0%
! AGAATAATGGTAAGTAACAT+AGG + chr3_4:6067687-6067706 None:intergenic 25.0%
!!! ATGTAGGTTAAATTTGTTAG+AGG - chr3_4:6067733-6067752 Msa0487310:intron 25.0%
!!! TTAAATTTGTTAGAGGTTGT+GGG - chr3_4:6067740-6067759 Msa0487310:intron 25.0%
! TTGTGCTAAATGAAAATTTC+AGG - chr3_4:6067982-6068001 Msa0487310:intron 25.0%
! TAATTGTAAGCATATGAAAC+TGG + chr3_4:6068163-6068182 None:intergenic 25.0%
! CATATGCTTACAATTAAATC+GGG - chr3_4:6068167-6068186 Msa0487310:CDS 25.0%
!! ATGATAACAACAAACTTGTT+AGG - chr3_4:6068681-6068700 Msa0487310:intron 25.0%
! AGGATGAAATTATTTGTTCA+TGG - chr3_4:6068762-6068781 Msa0487310:intron 25.0%
! TAATTGAAGATAGGACAAAA+AGG - chr3_4:6069144-6069163 Msa0487310:intron 25.0%
! AATTGAAGATAGGACAAAAA+GGG - chr3_4:6069145-6069164 Msa0487310:intron 25.0%
!! CTTTTTGTTCAATCTTCAAT+TGG + chr3_4:6069241-6069260 None:intergenic 25.0%
! TAAGTATAACAATGTGGTAA+CGG + chr3_4:6069294-6069313 None:intergenic 25.0%
! TTACCACATTGTTATACTTA+AGG - chr3_4:6069294-6069313 Msa0487310:intron 25.0%
! ATTCCTTAAGTATAACAATG+TGG + chr3_4:6069300-6069319 None:intergenic 25.0%
!!! AATGATGTGTTTTGTTTGTT+TGG - chr3_4:6069317-6069336 Msa0487310:intron 25.0%
!! TTTGTTTGTTTGGAGTATAA+TGG - chr3_4:6069327-6069346 Msa0487310:intron 25.0%
! CATGTTCAACATTATCAATT+AGG - chr3_4:6069427-6069446 Msa0487310:intron 25.0%
!! TTTTGTAGTCATTTCTTCTT+TGG + chr3_4:6069479-6069498 None:intergenic 25.0%
! ACTTCTTGGAAGATATAATT+GGG - chr3_4:6069569-6069588 Msa0487310:intron 25.0%
!!! TGAAGATTGTTTAGAGTTTT+TGG + chr3_4:6069675-6069694 None:intergenic 25.0%
! ATCTTGCATTTCATTATCAT+TGG - chr3_4:6069695-6069714 Msa0487310:intron 25.0%
! CATTTCATTATCATTGGTAA+AGG - chr3_4:6069701-6069720 Msa0487310:intron 25.0%
! TTGGTAAAGGATAAAATTCT+TGG - chr3_4:6069714-6069733 Msa0487310:intron 25.0%
! CACAATCATCATAATTACAT+TGG + chr3_4:6069765-6069784 None:intergenic 25.0%
! CAATGTAATTATGATGATTG+TGG - chr3_4:6069763-6069782 Msa0487310:intron 25.0%
!!! TTATGGGTTTTGAAGATATA+AGG - chr3_4:6070171-6070190 Msa0487310:intron 25.0%
! TTTGAAGATATAAGGTAATG+TGG - chr3_4:6070179-6070198 Msa0487310:intron 25.0%
! TATAATCAAAATTACGGTCA+TGG + chr3_4:6070219-6070238 None:intergenic 25.0%
! TAAAATGTACAAGTTTGAAG+GGG - chr3_4:6070936-6070955 Msa0487310:intron 25.0%
!! TTTAGAGCATAAAATACAAC+TGG + chr3_4:6071008-6071027 None:intergenic 25.0%
! GTAAAAAGTCAGACATTTAA+AGG + chr3_4:6071150-6071169 None:intergenic 25.0%
! TAGAAAACAGAATAGTTAGA+TGG + chr3_4:6071253-6071272 None:intergenic 25.0%
!! ATCTAACTATTCTGTTTTCT+AGG - chr3_4:6071252-6071271 Msa0487310:CDS 25.0%
! TTACTACTGAAGATTGAAAA+AGG - chr3_4:6071365-6071384 Msa0487310:intron 25.0%
TTCTTCAAAGCAATGGTAAA+AGG + chr3_4:6062801-6062820 None:intergenic 30.0%
TAGAACAAGAATACCATGAA+TGG - chr3_4:6063000-6063019 Msa0487310:CDS 30.0%
GCATTTCTAATATCCATTCA+TGG + chr3_4:6063016-6063035 None:intergenic 30.0%
! AATGTATTAAAGGATTAGCG+AGG + chr3_4:6063253-6063272 None:intergenic 30.0%
!! TTCAAGCAAAAAGTACTCTA+TGG + chr3_4:6063536-6063555 None:intergenic 30.0%
!! ATAGAGTACTTTTTGCTTGA+AGG - chr3_4:6063535-6063554 Msa0487310:intron 30.0%
!! TTTTTGCTTGAAGGTTTTGA+AGG - chr3_4:6063544-6063563 Msa0487310:intron 30.0%
! CTTCTTATTTACCTCTAATC+GGG + chr3_4:6063687-6063706 None:intergenic 30.0%
GATTAGAGGTAAATAAGAAG+TGG - chr3_4:6063687-6063706 Msa0487310:CDS 30.0%
AAGTGAAAAAAAGTGGAAAC+CGG - chr3_4:6063842-6063861 Msa0487310:intron 30.0%
!!! GTAATTTTGGTAATGAGTGA+AGG - chr3_4:6063904-6063923 Msa0487310:CDS 30.0%
! TTTTGTTAATAGGAGAAGCT+CGG - chr3_4:6064051-6064070 Msa0487310:intron 30.0%
!! GTGGTAAGTATTTTATTTGG+AGG - chr3_4:6064488-6064507 Msa0487310:intron 30.0%
! TTTGATGATACTATGTCCTT+GGG + chr3_4:6064691-6064710 None:intergenic 30.0%
GTATCATCAAAGTTTATTCC+TGG - chr3_4:6064700-6064719 Msa0487310:CDS 30.0%
! TGAATTCATGCAATTTTCGA+AGG + chr3_4:6065227-6065246 None:intergenic 30.0%
TGCAATGAAATATAGTGCAT+TGG - chr3_4:6065344-6065363 Msa0487310:intron 30.0%
!! CATTGGTAATTTTATCTGCT+AGG - chr3_4:6065361-6065380 Msa0487310:intron 30.0%
TCCTTCACAAAACTATAACA+TGG - chr3_4:6065546-6065565 Msa0487310:intron 30.0%
!!! TCCATGTTATAGTTTTGTGA+AGG + chr3_4:6065550-6065569 None:intergenic 30.0%
CAACAAATGATTTACTGTAC+AGG - chr3_4:6065625-6065644 Msa0487310:intron 30.0%
AGCTCCGTTTAAAAAAATTC+CGG - chr3_4:6065704-6065723 Msa0487310:intron 30.0%
!!! TGTTTTGGAATGTTTAACAC+AGG - chr3_4:6065886-6065905 Msa0487310:CDS 30.0%
! ATCAAAGTAGTTCTATAGCT+GGG + chr3_4:6065950-6065969 None:intergenic 30.0%
! AATCAAAGTAGTTCTATAGC+TGG + chr3_4:6065951-6065970 None:intergenic 30.0%
! TTTTTGTATTCAGTTTCTCC+TGG - chr3_4:6066100-6066119 Msa0487310:CDS 30.0%
!! AGTTGGTCTTCTCTTATATT+AGG + chr3_4:6066151-6066170 None:intergenic 30.0%
!!! TGTTTTAGTTCATTCACTTG+TGG - chr3_4:6066260-6066279 Msa0487310:intron 30.0%
GACCTAAAAGTAACACTATA+TGG - chr3_4:6066290-6066309 Msa0487310:intron 30.0%
!!! TCCCATATAGTGTTACTTTT+AGG + chr3_4:6066295-6066314 None:intergenic 30.0%
TAAAAGTAACACTATATGGG+AGG - chr3_4:6066294-6066313 Msa0487310:intron 30.0%
!! ATTTATTTGTTGGGTTGGAT+CGG - chr3_4:6066511-6066530 Msa0487310:intron 30.0%
! AAAGCTTTGACCTACAAAAT+CGG + chr3_4:6066690-6066709 None:intergenic 30.0%
!! CTTTGTTTCAATTTTCTGGT+GGG - chr3_4:6066706-6066725 Msa0487310:intron 30.0%
! TGAAAACTAGAACTCTAGAA+GGG + chr3_4:6066739-6066758 None:intergenic 30.0%
ATGAAAACTAGAACTCTAGA+AGG + chr3_4:6066740-6066759 None:intergenic 30.0%
TTCTTTGTATGGACAATTAC+AGG - chr3_4:6067084-6067103 Msa0487310:intron 30.0%
! GAGGTTAATATTCTTTTGGA+AGG - chr3_4:6067282-6067301 Msa0487310:intron 30.0%
!! TTCTTTTGGAAGGATTTGAA+AGG - chr3_4:6067292-6067311 Msa0487310:intron 30.0%
TAATTGCAGTACTGTATACA+AGG - chr3_4:6067320-6067339 Msa0487310:intron 30.0%
TCTTACAAACTCTAGTATAC+TGG - chr3_4:6067351-6067370 Msa0487310:intron 30.0%
CTTACAAACTCTAGTATACT+GGG - chr3_4:6067352-6067371 Msa0487310:intron 30.0%
ACTTGGAGAAACATATATGT+AGG - chr3_4:6067400-6067419 Msa0487310:intron 30.0%
CTTGGAGAAACATATATGTA+GGG - chr3_4:6067401-6067420 Msa0487310:intron 30.0%
AAAGGAAAAATTGATCTTGG+TGG - chr3_4:6067525-6067544 Msa0487310:intron 30.0%
AAAATGTTACACAGTGATGT+AGG - chr3_4:6067717-6067736 Msa0487310:intron 30.0%
!! GTTAAATTTGTTAGAGGTTG+TGG - chr3_4:6067739-6067758 Msa0487310:intron 30.0%
CATCTAATCTGTTTGATTCA+TGG - chr3_4:6067839-6067858 Msa0487310:intron 30.0%
! TTTGAAATTGTCAATGCTGA+TGG - chr3_4:6068098-6068117 Msa0487310:intron 30.0%
ATTAAGACAAAGTCAGAATG+AGG + chr3_4:6068823-6068842 None:intergenic 30.0%
! CATTAATTTTCTGACCAAGT+TGG + chr3_4:6068987-6069006 None:intergenic 30.0%
TCCATTCAATGAACAATATC+AGG + chr3_4:6069171-6069190 None:intergenic 30.0%
AAACCACAAAACATGTCATT+GGG + chr3_4:6069383-6069402 None:intergenic 30.0%
CACTTCTTGGAAGATATAAT+TGG - chr3_4:6069568-6069587 Msa0487310:intron 30.0%
CTTCTTGGAAGATATAATTG+GGG - chr3_4:6069570-6069589 Msa0487310:intron 30.0%
!!! GATTGTTTAGAGTTTTTGGT+CGG + chr3_4:6069671-6069690 None:intergenic 30.0%
ATTTGTGGAGGTAACTAATA+TGG + chr3_4:6069883-6069902 None:intergenic 30.0%
GTTAGTAAATGAGTGATACA+GGG + chr3_4:6069914-6069933 None:intergenic 30.0%
TGTTAGTAAATGAGTGATAC+AGG + chr3_4:6069915-6069934 None:intergenic 30.0%
GTAAAACAATGAATCTTCTG+AGG - chr3_4:6069935-6069954 Msa0487310:intron 30.0%
! AAGCAAACGTTTTCATGTTA+TGG - chr3_4:6070154-6070173 Msa0487310:intron 30.0%
! AGCAAACGTTTTCATGTTAT+GGG - chr3_4:6070155-6070174 Msa0487310:intron 30.0%
! CTATTTGATAACTTTGGATC+GGG + chr3_4:6070414-6070433 None:intergenic 30.0%
! CCTATTTGATAACTTTGGAT+CGG + chr3_4:6070415-6070434 None:intergenic 30.0%
! GTTCTCCTATTTGATAACTT+TGG + chr3_4:6070420-6070439 None:intergenic 30.0%
CTTGAAAAGGCTAAATAGAA+CGG + chr3_4:6070538-6070557 None:intergenic 30.0%
!!! TCTTGCTTGTTTTGTAAACA+TGG + chr3_4:6069815-6069834 None:intergenic 30.0%
GCTATTGAATGTATAGAGAA+TGG - chr3_4:6070597-6070616 Msa0487310:intron 30.0%
ATCTAATGAACTCATGTGTT+TGG - chr3_4:6070760-6070779 Msa0487310:CDS 30.0%
TCTAATGAACTCATGTGTTT+GGG - chr3_4:6070761-6070780 Msa0487310:CDS 30.0%
! GTGTATTAATTCTTTTGCAG+TGG + chr3_4:6070869-6070888 None:intergenic 30.0%
TTAATACACACACATTGACA+AGG - chr3_4:6070880-6070899 Msa0487310:CDS 30.0%
! CTTGCATATATTTTCCTTGT+GGG - chr3_4:6071279-6071298 Msa0487310:CDS 30.0%
AAGCAATGGTAAAAGGATTC+TGG + chr3_4:6062794-6062813 None:intergenic 35.0%
!! TACCATTGCTTTGAAGAACT+TGG - chr3_4:6062803-6062822 Msa0487310:CDS 35.0%
!! ACCATTGCTTTGAAGAACTT+GGG - chr3_4:6062804-6062823 Msa0487310:CDS 35.0%
TGTTTCCGTCAAAATTAGCA+CGG - chr3_4:6062950-6062969 Msa0487310:CDS 35.0%
ACACACTTTCATACCAACAA+AGG - chr3_4:6063217-6063236 Msa0487310:intron 35.0%
GTGAAGTCATTAGAGTTCAT+CGG - chr3_4:6063413-6063432 Msa0487310:intron 35.0%
TGAAGTCATTAGAGTTCATC+GGG - chr3_4:6063414-6063433 Msa0487310:intron 35.0%
TTACTTTATGCGCTACATTC+AGG + chr3_4:6063589-6063608 None:intergenic 35.0%
! TGTGCTTTGCTTGATTTTAC+AGG - chr3_4:6064158-6064177 Msa0487310:CDS 35.0%
CAAAGAGCTACTGATATTCA+AGG + chr3_4:6064245-6064264 None:intergenic 35.0%
TGAGTCTAATTTCTATGCAC+TGG - chr3_4:6064532-6064551 Msa0487310:intron 35.0%
! CTTTGATGATACTATGTCCT+TGG + chr3_4:6064692-6064711 None:intergenic 35.0%
! TGGTAATTTTATCTGCTAGG+TGG - chr3_4:6065364-6065383 Msa0487310:intron 35.0%
TGAAACGTATTCATTGTGCT+TGG - chr3_4:6065423-6065442 Msa0487310:intron 35.0%
AATGATTTACTGTACAGGGT+TGG - chr3_4:6065630-6065649 Msa0487310:intron 35.0%
ATGGATGTCATAACATGCAA+TGG + chr3_4:6065676-6065695 None:intergenic 35.0%
GACTTGTATTTCAAAGTGCA+TGG - chr3_4:6065759-6065778 Msa0487310:intron 35.0%
GTAGTGAATTGGACAAGATA+AGG - chr3_4:6065924-6065943 Msa0487310:intron 35.0%
CACGGAAAAGATACTGAAAA+CGG + chr3_4:6065992-6066011 None:intergenic 35.0%
TTAGCATATTCGAGATAACC+AGG + chr3_4:6066121-6066140 None:intergenic 35.0%
AACTCCTTGAAAATGAAACC+CGG + chr3_4:6066178-6066197 None:intergenic 35.0%
GACTGTGTTCATTCACTTAT+GGG - chr3_4:6066316-6066335 Msa0487310:intron 35.0%
GATCCAATCAAATGTGTAGA+TGG - chr3_4:6066550-6066569 Msa0487310:intron 35.0%
TCACCATCTACACATTTGAT+TGG + chr3_4:6066556-6066575 None:intergenic 35.0%
!!! GCTTTGTTTCAATTTTCTGG+TGG - chr3_4:6066705-6066724 Msa0487310:intron 35.0%
! GAAAACTAGAACTCTAGAAG+GGG + chr3_4:6066738-6066757 None:intergenic 35.0%
TCATCACACAAATGTTCACT+TGG - chr3_4:6066756-6066775 Msa0487310:CDS 35.0%
TATAGAAACCATGTGTCTGA+AGG - chr3_4:6067255-6067274 Msa0487310:intron 35.0%
! CGTGGAGGTTAATATTCTTT+TGG - chr3_4:6067278-6067297 Msa0487310:intron 35.0%
! TTTGCATTGATGGTTGTACT+TGG - chr3_4:6067383-6067402 Msa0487310:intron 35.0%
GATCTACAGGTAGATGATAA+AGG - chr3_4:6067507-6067526 Msa0487310:intron 35.0%
! CTAAAGTTAACAGCAGGTTT+TGG - chr3_4:6067552-6067571 Msa0487310:intron 35.0%
TCCATATCTGTTATGTTCGA+AGG - chr3_4:6067869-6067888 Msa0487310:intron 35.0%
ACCTTCGAACATAACAGATA+TGG + chr3_4:6067873-6067892 None:intergenic 35.0%
TCGAAGGTAAACCAAAATTC+AGG - chr3_4:6067885-6067904 Msa0487310:intron 35.0%
GCTGTATTGTGTTCAATTTC+AGG - chr3_4:6068031-6068050 Msa0487310:intron 35.0%
TCGATTCATCTGCATTAGAA+AGG + chr3_4:6068193-6068212 None:intergenic 35.0%
CTAATGCAGATGAATCGATA+CGG - chr3_4:6068195-6068214 Msa0487310:intron 35.0%
! ATACGGTACACTTTTAAGCA+TGG - chr3_4:6068212-6068231 Msa0487310:intron 35.0%
!! ATTTCTGGAACACGAATAGA+TGG + chr3_4:6068251-6068270 None:intergenic 35.0%
TATTCGTGTTCCAGAAATTG+AGG - chr3_4:6068253-6068272 Msa0487310:intron 35.0%
ATGAGAAGCTTCAAAGCAAA+AGG + chr3_4:6068282-6068301 None:intergenic 35.0%
AATTGGTTAGATTTGTCTGC+AGG - chr3_4:6068384-6068403 Msa0487310:CDS 35.0%
!! AAGAGTTGATAGTTCCTTCA+GGG + chr3_4:6068479-6068498 None:intergenic 35.0%
!! TAAGAGTTGATAGTTCCTTC+AGG + chr3_4:6068480-6068499 None:intergenic 35.0%
GAGGCAAAAAAATCAGAATG+AGG + chr3_4:6068897-6068916 None:intergenic 35.0%
TCAGAATGAGGCAAAAAATG+AGG + chr3_4:6068916-6068935 None:intergenic 35.0%
GAGGCAAAAAAATCAGAATG+AGG + chr3_4:6068897-6068916 None:intergenic 35.0%
CTGTGTACAAGCAAAAAATG+AGG + chr3_4:6068947-6068966 None:intergenic 35.0%
GCCTGATATTGTTCATTGAA+TGG - chr3_4:6069167-6069186 Msa0487310:intron 35.0%
GGTAATTGCTAAAACATCGT+AGG + chr3_4:6069220-6069239 None:intergenic 35.0%
! GTTTGTTTGGAGTATAATGG+AGG - chr3_4:6069330-6069349 Msa0487310:intron 35.0%
!!! AGGCAATGAGGTTTTAACTT+AGG - chr3_4:6069350-6069369 Msa0487310:intron 35.0%
CAAAACATGTCATTGGGTTT+GGG + chr3_4:6069377-6069396 None:intergenic 35.0%
ACAAAACATGTCATTGGGTT+TGG + chr3_4:6069378-6069397 None:intergenic 35.0%
! AAACCCAATGACATGTTTTG+TGG - chr3_4:6069377-6069396 Msa0487310:intron 35.0%
CAAACCACAAAACATGTCAT+TGG + chr3_4:6069384-6069403 None:intergenic 35.0%
TGTAGTCATTTCTTCTTTGG+TGG + chr3_4:6069476-6069495 None:intergenic 35.0%
AAAGCAACAGAATCACTTCT+TGG - chr3_4:6069555-6069574 Msa0487310:intron 35.0%
AGAATGTTAGCGGAATATCT+TGG - chr3_4:6069996-6070015 Msa0487310:intron 35.0%
!! GGGTGTTATTTGTAGATCTT+TGG - chr3_4:6070034-6070053 Msa0487310:CDS 35.0%
ATAAGGTAATGTGGAGTTTC+AGG - chr3_4:6070188-6070207 Msa0487310:intron 35.0%
TAAGGTAATGTGGAGTTTCA+GGG - chr3_4:6070189-6070208 Msa0487310:intron 35.0%
CAAACAATGCTTCATTTGAC+AGG - chr3_4:6070340-6070359 Msa0487310:intron 35.0%
! TTTTGCAAGTTCCCATCATA+TGG + chr3_4:6070366-6070385 None:intergenic 35.0%
CCGATCCAAAGTTATCAAAT+AGG - chr3_4:6070412-6070431 Msa0487310:intron 35.0%
AAACATGGAGCTTCTTGAAA+AGG + chr3_4:6070551-6070570 None:intergenic 35.0%
! CAAAACAAGCAAGAGTATGA+TGG - chr3_4:6070572-6070591 Msa0487310:intron 35.0%
!! AATGGTGCTGTATCATTAGA+TGG - chr3_4:6070615-6070634 Msa0487310:intron 35.0%
GAAAATGGAACTCTTTCTCT+TGG - chr3_4:6070651-6070670 Msa0487310:intron 35.0%
TCACAGACAGAAAAGAGAAA+AGG + chr3_4:6070691-6070710 None:intergenic 35.0%
!!! TGGTTATTTTCGGGTATAGA+AGG - chr3_4:6071049-6071068 Msa0487310:intron 35.0%
CCACAAGGAAAATATATGCA+AGG + chr3_4:6071281-6071300 None:intergenic 35.0%
! CCTTGCATATATTTTCCTTG+TGG - chr3_4:6071278-6071297 Msa0487310:CDS 35.0%
CTACTGAAGATTGAAAAAGG+TGG - chr3_4:6071368-6071387 Msa0487310:intron 35.0%
TTGGAACAAAATCCAGAGAT+TGG - chr3_4:6071497-6071516 Msa0487310:CDS 35.0%
TGGAACAAAATCCAGAGATT+GGG - chr3_4:6071498-6071517 Msa0487310:CDS 35.0%
! TATAACTGGCTTATCCTCAC+CGG + chr3_4:6063066-6063085 None:intergenic 40.0%
!! GGTGGATTGACAACTATAAC+TGG + chr3_4:6063080-6063099 None:intergenic 40.0%
! TGGCATTTCTGAAGATGGTA+TGG - chr3_4:6063115-6063134 Msa0487310:intron 40.0%
TGAAGAGAAAGGAGAAGTCT+TGG - chr3_4:6063440-6063459 Msa0487310:intron 40.0%
TACCTCTAATCGGGAGATAT+GGG + chr3_4:6063678-6063697 None:intergenic 40.0%
TTACCTCTAATCGGGAGATA+TGG + chr3_4:6063679-6063698 None:intergenic 40.0%
!! TTCTCCTCTGGGATATCTAT+TGG + chr3_4:6064184-6064203 None:intergenic 40.0%
ATAGATATCCCAGAGGAGAA+TGG - chr3_4:6064184-6064203 Msa0487310:CDS 40.0%
TAGATATCCCAGAGGAGAAT+GGG - chr3_4:6064185-6064204 Msa0487310:CDS 40.0%
AGCTACTGATATTCAAGGTG+GGG + chr3_4:6064240-6064259 None:intergenic 40.0%
GAGCTACTGATATTCAAGGT+GGG + chr3_4:6064241-6064260 None:intergenic 40.0%
AGAGCTACTGATATTCAAGG+TGG + chr3_4:6064242-6064261 None:intergenic 40.0%
CAACGTGCTTTCGTTTATAC+TGG + chr3_4:6064466-6064485 None:intergenic 40.0%
! TAAACGAAAGCACGTTGATG+TGG - chr3_4:6064469-6064488 Msa0487310:intron 40.0%
TTGAATTCTCATTCCTCCCA+AGG - chr3_4:6064672-6064691 Msa0487310:intron 40.0%
TATAATTAGCGTGTCGTGTC+TGG - chr3_4:6064877-6064896 Msa0487310:intron 40.0%
TGACATCAAGCTCTTGACAT+TGG + chr3_4:6065472-6065491 None:intergenic 40.0%
AATGTCAAGAGCTTGATGTC+AGG - chr3_4:6065471-6065490 Msa0487310:intron 40.0%
TAACATGCAATGGCTAAGGA+TGG + chr3_4:6065666-6065685 None:intergenic 40.0%
GTCATAACATGCAATGGCTA+AGG + chr3_4:6065670-6065689 None:intergenic 40.0%
CAATCAAAATCACCTCGACA+CGG + chr3_4:6066010-6066029 None:intergenic 40.0%
AAGAGAAGACCAACTACTTC+CGG - chr3_4:6066156-6066175 Msa0487310:CDS 40.0%
AAATGAAACCCGGAAGTAGT+TGG + chr3_4:6066168-6066187 None:intergenic 40.0%
! ACTTCCGGGTTTCATTTTCA+AGG - chr3_4:6066171-6066190 Msa0487310:intron 40.0%
TTTCAAGGAGTTAGCGTTTG+AGG - chr3_4:6066186-6066205 Msa0487310:intron 40.0%
GGACTGTGTTCATTCACTTA+TGG - chr3_4:6066315-6066334 Msa0487310:intron 40.0%
CTATATGAGAGGGTTGTGTT+TGG - chr3_4:6066360-6066379 Msa0487310:intron 40.0%
ACATTTGATTGGATCTTCCC+CGG + chr3_4:6066545-6066564 None:intergenic 40.0%
!!! AAGGCTTTTAAAGTGTGTGC+AGG - chr3_4:6066836-6066855 Msa0487310:intron 40.0%
GGTCAACTAAAGTTAACAGC+AGG - chr3_4:6067546-6067565 Msa0487310:intron 40.0%
!!! ACAGCAGGTTTTGGAGAAAA+TGG - chr3_4:6067561-6067580 Msa0487310:intron 40.0%
AGGTAAACCAAAATTCAGGC+AGG - chr3_4:6067889-6067908 Msa0487310:intron 40.0%
! GAAAACTCCTGCCTGAATTT+TGG + chr3_4:6067899-6067918 None:intergenic 40.0%
TTGTGCAACATCTTTCGCAT+TGG + chr3_4:6068428-6068447 None:intergenic 40.0%
!! AGGGGGAAAGTATTCTTATC+CGG + chr3_4:6068460-6068479 None:intergenic 40.0%
TAAGAATACTTTCCCCCTGA+AGG - chr3_4:6068462-6068481 Msa0487310:intron 40.0%
!! AGAGTTGATAGTTCCTTCAG+GGG + chr3_4:6068478-6068497 None:intergenic 40.0%
AGCATAACGAATCACAGTCA+TGG + chr3_4:6068604-6068623 None:intergenic 40.0%
TTTGACGACATTTGCCAACT+TGG - chr3_4:6068970-6068989 Msa0487310:intron 40.0%
AGTCATTTCTTCTTTGGTGG+TGG + chr3_4:6069473-6069492 None:intergenic 40.0%
ATTCTGAACAGAACCAAGGA+GGG + chr3_4:6069602-6069621 None:intergenic 40.0%
!!! TTTAGAGTTTTTGGTCGGCA+GGG + chr3_4:6069666-6069685 None:intergenic 40.0%
TACAGGGCACATATCATTTG+TGG + chr3_4:6069898-6069917 None:intergenic 40.0%
TCTTGGTGAAGATCAAATGC+TGG - chr3_4:6070013-6070032 Msa0487310:intron 40.0%
CTTGGTGAAGATCAAATGCT+GGG - chr3_4:6070014-6070033 Msa0487310:intron 40.0%
AAGGTAATGTGGAGTTTCAG+GGG - chr3_4:6070190-6070209 Msa0487310:intron 40.0%
TGAGGAAAAACTATGGGACA+AGG - chr3_4:6070278-6070297 Msa0487310:intron 40.0%
TCATTTGACAGGCCATATGA+TGG - chr3_4:6070351-6070370 Msa0487310:intron 40.0%
CATTTGACAGGCCATATGAT+GGG - chr3_4:6070352-6070371 Msa0487310:intron 40.0%
GGCGGCATTATAAGAGAAAA+TGG - chr3_4:6070636-6070655 Msa0487310:intron 40.0%
! GAACTCTTTCTCTTGGCTTT+GGG - chr3_4:6070658-6070677 Msa0487310:intron 40.0%
CAACTGGTTATCAGTTCAGT+TGG + chr3_4:6070992-6071011 None:intergenic 40.0%
TTCAACATTTGCGTAGCTTC+TGG + chr3_4:6071323-6071342 None:intergenic 40.0%
! AACAATGAAGCCTTTTGCTG+AGG - chr3_4:6071472-6071491 Msa0487310:CDS 40.0%
CAATCTCCTAAGTCTAGCAT+AGG + chr3_4:6071527-6071546 None:intergenic 40.0%
GCCCAAGTTCTTCAAAGCAA+TGG + chr3_4:6062808-6062827 None:intergenic 45.0%
! TGTCGCCGTGCTAATTTTGA+CGG + chr3_4:6062958-6062977 None:intergenic 45.0%
! TATGATGACGAAGCTGATGC+CGG - chr3_4:6063044-6063063 Msa0487310:intron 45.0%
AGTTGTCAATCCACCGAACA+AGG - chr3_4:6063085-6063104 Msa0487310:intron 45.0%
ATGCCAAGTGCTTCCTTGTT+CGG + chr3_4:6063101-6063120 None:intergenic 45.0%
! GCACTTGGCATTTCTGAAGA+TGG - chr3_4:6063110-6063129 Msa0487310:intron 45.0%
!! TGAGACTAGTCTAGTGCAAC+TGG + chr3_4:6063306-6063325 None:intergenic 45.0%
!! TCATCGGGTTCTGAAGAGAA+AGG - chr3_4:6063429-6063448 Msa0487310:intron 45.0%
AAGGAGAAGTCTTGGAGTCA+TGG - chr3_4:6063448-6063467 Msa0487310:intron 45.0%
! TGTTAAGGGGAGCATGTTCA+GGG - chr3_4:6063485-6063504 Msa0487310:intron 45.0%
!!! TGAAGGTTTTGAAGGAGACC+TGG - chr3_4:6063552-6063571 Msa0487310:intron 45.0%
!!! GAAGGTTTTGAAGGAGACCT+GGG - chr3_4:6063553-6063572 Msa0487310:intron 45.0%
ATTCAGGAATCTTACCACCC+AGG + chr3_4:6063573-6063592 None:intergenic 45.0%
TCTAATCGGGAGATATGGGA+TGG + chr3_4:6063674-6063693 None:intergenic 45.0%
ATCCCATATCTCCCGATTAG+AGG - chr3_4:6063673-6063692 Msa0487310:CDS 45.0%
!! CGTTTATACTGGTTTGTGCC+TGG + chr3_4:6064455-6064474 None:intergenic 45.0%
GATGATACTATGTCCTTGGG+AGG + chr3_4:6064688-6064707 None:intergenic 45.0%
CTACTTTAACTCGAGCGAGA+TGG - chr3_4:6065144-6065163 Msa0487310:intron 45.0%
TGCAATGGCTAAGGATGGAA+AGG + chr3_4:6065661-6065680 None:intergenic 45.0%
TAAACGGAGCTCGATTGTCA+TGG + chr3_4:6065695-6065714 None:intergenic 45.0%
AGTTCAACAGTCACGTCATC+CGG + chr3_4:6065726-6065745 None:intergenic 45.0%
TGACGTGACTGTTGAACTTC+AGG - chr3_4:6065728-6065747 Msa0487310:intron 45.0%
! TCAGTATCTTTTCCGTGTCG+AGG - chr3_4:6065995-6066014 Msa0487310:CDS 45.0%
AGAGAAGACCAACTACTTCC+GGG - chr3_4:6066157-6066176 Msa0487310:CDS 45.0%
GGTTGGATCGGTAGAAATTC+CGG - chr3_4:6066523-6066542 Msa0487310:intron 45.0%
GTTGGATCGGTAGAAATTCC+GGG - chr3_4:6066524-6066543 Msa0487310:intron 45.0%
TTGGATCGGTAGAAATTCCG+GGG - chr3_4:6066525-6066544 Msa0487310:intron 45.0%
!!! TGCTGCAATGCCGATTTTGT+AGG - chr3_4:6066677-6066696 Msa0487310:intron 45.0%
AATCTTGCGAATCGCATCTG+AGG - chr3_4:6067931-6067950 Msa0487310:intron 45.0%
TGTTGCACAACATCTATCCC+CGG - chr3_4:6068438-6068457 Msa0487310:intron 45.0%
!! GGGGAAAGTATTCTTATCCG+GGG + chr3_4:6068458-6068477 None:intergenic 45.0%
!! GGGGGAAAGTATTCTTATCC+GGG + chr3_4:6068459-6068478 None:intergenic 45.0%
!! GAGTTGATAGTTCCTTCAGG+GGG + chr3_4:6068477-6068496 None:intergenic 45.0%
ATCTCTGTCCTCAATAGCGA+TGG - chr3_4:6068520-6068539 Msa0487310:CDS 45.0%
ATACCTTGCCATCGCTATTG+AGG + chr3_4:6068531-6068550 None:intergenic 45.0%
! GGAGTATAATGGAGGCAATG+AGG - chr3_4:6069338-6069357 Msa0487310:intron 45.0%
GATTCTGAACAGAACCAAGG+AGG + chr3_4:6069603-6069622 None:intergenic 45.0%
CAGGATTCTGAACAGAACCA+AGG + chr3_4:6069606-6069625 None:intergenic 45.0%
TTCAGAATCCTGAGCTTAGC+AGG - chr3_4:6069614-6069633 Msa0487310:intron 45.0%
TTGACAAACCTGCTAAGCTC+AGG + chr3_4:6069625-6069644 None:intergenic 45.0%
!!! GTTTAGAGTTTTTGGTCGGC+AGG + chr3_4:6069667-6069686 None:intergenic 45.0%
AGGGCACATATCATTTGTGG+AGG + chr3_4:6069895-6069914 None:intergenic 45.0%
! TGGGACAAGGCTTTATGACT+AGG - chr3_4:6070291-6070310 Msa0487310:intron 45.0%
TCAAATAGGAGAACGCCAGA+AGG - chr3_4:6070426-6070445 Msa0487310:intron 45.0%
! AGAACGCCAGAAGGCTTTAT+GGG - chr3_4:6070435-6070454 Msa0487310:intron 45.0%
GCATAACCCATAAAGCCTTC+TGG + chr3_4:6070444-6070463 None:intergenic 45.0%
ATTCCCATCACCTAGAGACA+AGG - chr3_4:6070484-6070503 Msa0487310:intron 45.0%
TGTCCTTGTCTCTAGGTGAT+GGG + chr3_4:6070490-6070509 None:intergenic 45.0%
! GGTGCTGTATCATTAGATGG+CGG - chr3_4:6070618-6070637 Msa0487310:intron 45.0%
GGAACTCTTTCTCTTGGCTT+TGG - chr3_4:6070657-6070676 Msa0487310:intron 45.0%
GTGAGCATGTGATGACTTCT+AGG - chr3_4:6070707-6070726 Msa0487310:intron 45.0%
! TTTTCCTTGTGGGAGCAAGA+TGG - chr3_4:6071289-6071308 Msa0487310:CDS 45.0%
ATATCCATCTTGCTCCCACA+AGG + chr3_4:6071296-6071315 None:intergenic 45.0%
AACATTTGCGTAGCTTCTGG+AGG + chr3_4:6071320-6071339 None:intergenic 45.0%
TGTTCCAATGCCTCAGCAAA+AGG + chr3_4:6071485-6071504 None:intergenic 45.0%
!! TTATAATAAATTCAATAATT+AGG + chr3_4:6063751-6063770 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTGTTAAT+AGG - chr3_4:6064041-6064060 Msa0487310:intron 5.0%
! GTGTTAAGGGGAGCATGTTC+AGG - chr3_4:6063484-6063503 Msa0487310:intron 50.0%
GAGAAGCTCGGATCATATGC+AGG - chr3_4:6064063-6064082 Msa0487310:intron 50.0%
CAGGCCAATAGATATCCCAG+AGG - chr3_4:6064177-6064196 Msa0487310:CDS 50.0%
!! TCGGTGTCGATCACGCTTAT+AGG + chr3_4:6064274-6064293 None:intergenic 50.0%
AAGCGTGATCGACACCGAAA+AGG - chr3_4:6064276-6064295 Msa0487310:CDS 50.0%
AAACCATGTGTCTGAAGGCG+TGG - chr3_4:6067260-6067279 Msa0487310:intron 50.0%
! GTGCCTGATTTTTGTGCCAC+TGG - chr3_4:6068053-6068072 Msa0487310:intron 50.0%
CCACCAGTGGCACAAAAATC+AGG + chr3_4:6068059-6068078 None:intergenic 50.0%
!! CCTGATTTTTGTGCCACTGG+TGG - chr3_4:6068056-6068075 Msa0487310:intron 50.0%
AGAGCTGTGTCTGACTGCAA+AGG - chr3_4:6068313-6068332 Msa0487310:CDS 50.0%
TGTCCTCAATAGCGATGGCA+AGG - chr3_4:6068525-6068544 Msa0487310:CDS 50.0%
CTGCGCAATCTCAAGTGAGA+AGG + chr3_4:6068744-6068763 None:intergenic 50.0%
CTTCTCACTTGAGATTGCGC+AGG - chr3_4:6068742-6068761 Msa0487310:intron 50.0%
CAAGAGCTGTTGATGCTGCA+AGG - chr3_4:6069057-6069076 Msa0487310:intron 50.0%
! GGTGGTGGCAAACAACAAGT+CGG + chr3_4:6069458-6069477 None:intergenic 50.0%
CACGTGCAGAGAGACTACAT+AGG + chr3_4:6069534-6069553 None:intergenic 50.0%
!!! AGTTTTTGGTCGGCAGGGAT+GGG + chr3_4:6069661-6069680 None:intergenic 50.0%
GCTGCTGAAGCAGCTAATCT+TGG - chr3_4:6070122-6070141 Msa0487310:CDS 50.0%
GAGAACGCCAGAAGGCTTTA+TGG - chr3_4:6070434-6070453 Msa0487310:intron 50.0%
CTGTCCTTGTCTCTAGGTGA+TGG + chr3_4:6070491-6070510 None:intergenic 50.0%
CCTAGAGACAAGGACAGCAT+CGG - chr3_4:6070494-6070513 Msa0487310:intron 50.0%
CTAGAGACAAGGACAGCATC+GGG - chr3_4:6070495-6070514 Msa0487310:intron 50.0%
! GAAGCCTTTTGCTGAGGCAT+TGG - chr3_4:6071478-6071497 Msa0487310:CDS 50.0%
AGCATAGGTGTCCCAATCTC+TGG + chr3_4:6071512-6071531 None:intergenic 50.0%
GGGACACCTATGCTAGACTT+AGG - chr3_4:6071518-6071537 Msa0487310:CDS 50.0%
CCAAGTGCTTCCTTGTTCGG+TGG + chr3_4:6063098-6063117 None:intergenic 55.0%
!! CCACCGAACAAGGAAGCACT+TGG - chr3_4:6063095-6063114 Msa0487310:intron 55.0%
!!! GGTTTTGAAGGAGACCTGGG+TGG - chr3_4:6063556-6063575 Msa0487310:intron 55.0%
GTTTGTGCCTGGCGAGTCAA+TGG + chr3_4:6064444-6064463 None:intergenic 55.0%
! GTTTTCCAGCTGACCACCAG+TGG + chr3_4:6068072-6068091 None:intergenic 55.0%
!!! GAGTTTTTGGTCGGCAGGGA+TGG + chr3_4:6069662-6069681 None:intergenic 55.0%
CCGATGCTGTCCTTGTCTCT+AGG + chr3_4:6070497-6070516 None:intergenic 55.0%
TGACGAAGCTGATGCCGGTG+AGG - chr3_4:6063049-6063068 Msa0487310:intron 60.0%
GAGCGCACCCATTCTCCTCT+GGG + chr3_4:6064195-6064214 None:intergenic 60.0%
AGAGCGCACCCATTCTCCTC+TGG + chr3_4:6064196-6064215 None:intergenic 60.0%
CCTGGCGAGTCAATGGAAGC+AGG + chr3_4:6064437-6064456 None:intergenic 60.0%
!! CCTGCTTCCATTGACTCGCC+AGG - chr3_4:6064434-6064453 Msa0487310:intron 60.0%
CCTCCACGCCTTCAGACACA+TGG + chr3_4:6067266-6067285 None:intergenic 60.0%
! CCATGTGTCTGAAGGCGTGG+AGG - chr3_4:6067263-6067282 Msa0487310:intron 60.0%
! TTGTGCCACTGGTGGTCAGC+TGG - chr3_4:6068064-6068083 Msa0487310:intron 60.0%
ATTGGGGTCGTTGCCCTCCT+TGG - chr3_4:6069586-6069605 Msa0487310:intron 60.0%
TTGGTCGGCAGGGATGGGAA+AGG + chr3_4:6069656-6069675 None:intergenic 60.0%
! ACAAGGACAGCATCGGGCCA+TGG - chr3_4:6070501-6070520 Msa0487310:intron 60.0%
! CAAGGACAGCATCGGGCCAT+GGG - chr3_4:6070502-6070521 Msa0487310:intron 60.0%
GAACGGTCTCACGAAGCCCA+TGG + chr3_4:6070521-6070540 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 6062777 6071547 6062777 ID=Msa0487310;Name=Msa0487310
chr3_4 mRNA 6062777 6071547 6062777 ID=Msa0487310-mRNA-1;Parent=Msa0487310;Name=Msa0487310-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.42|0.31|1|0.85|0.77|22|0|967
chr3_4 exon 6071472 6071547 6071472 ID=Msa0487310-mRNA-1:exon:2102;Parent=Msa0487310-mRNA-1
chr3_4 exon 6071193 6071378 6071193 ID=Msa0487310-mRNA-1:exon:2101;Parent=Msa0487310-mRNA-1
chr3_4 exon 6070747 6070905 6070747 ID=Msa0487310-mRNA-1:exon:2100;Parent=Msa0487310-mRNA-1
chr3_4 exon 6070240 6070261 6070240 ID=Msa0487310-mRNA-1:exon:2099;Parent=Msa0487310-mRNA-1
chr3_4 exon 6070027 6070144 6070027 ID=Msa0487310-mRNA-1:exon:2098;Parent=Msa0487310-mRNA-1
chr3_4 exon 6069843 6069950 6069843 ID=Msa0487310-mRNA-1:exon:2097;Parent=Msa0487310-mRNA-1
chr3_4 exon 6068832 6068941 6068832 ID=Msa0487310-mRNA-1:exon:2096;Parent=Msa0487310-mRNA-1
chr3_4 exon 6068497 6068677 6068497 ID=Msa0487310-mRNA-1:exon:2095;Parent=Msa0487310-mRNA-1
chr3_4 exon 6068308 6068416 6068308 ID=Msa0487310-mRNA-1:exon:2094;Parent=Msa0487310-mRNA-1
chr3_4 exon 6068117 6068211 6068117 ID=Msa0487310-mRNA-1:exon:2093;Parent=Msa0487310-mRNA-1
chr3_4 exon 6066983 6067081 6066983 ID=Msa0487310-mRNA-1:exon:2092;Parent=Msa0487310-mRNA-1
chr3_4 exon 6066742 6066808 6066742 ID=Msa0487310-mRNA-1:exon:2091;Parent=Msa0487310-mRNA-1
chr3_4 exon 6066372 6066457 6066372 ID=Msa0487310-mRNA-1:exon:2090;Parent=Msa0487310-mRNA-1
chr3_4 exon 6066200 6066271 6066200 ID=Msa0487310-mRNA-1:exon:2089;Parent=Msa0487310-mRNA-1
chr3_4 exon 6065990 6066187 6065990 ID=Msa0487310-mRNA-1:exon:2088;Parent=Msa0487310-mRNA-1
chr3_4 exon 6065778 6065918 6065778 ID=Msa0487310-mRNA-1:exon:2087;Parent=Msa0487310-mRNA-1
chr3_4 exon 6065246 6065357 6065246 ID=Msa0487310-mRNA-1:exon:2086;Parent=Msa0487310-mRNA-1
chr3_4 exon 6064689 6064875 6064689 ID=Msa0487310-mRNA-1:exon:2085;Parent=Msa0487310-mRNA-1
chr3_4 exon 6064132 6064326 6064132 ID=Msa0487310-mRNA-1:exon:2084;Parent=Msa0487310-mRNA-1
chr3_4 exon 6063868 6063962 6063868 ID=Msa0487310-mRNA-1:exon:2083;Parent=Msa0487310-mRNA-1
chr3_4 exon 6063645 6063858 6063645 ID=Msa0487310-mRNA-1:exon:2082;Parent=Msa0487310-mRNA-1
chr3_4 exon 6062777 6063050 6062777 ID=Msa0487310-mRNA-1:exon:2081;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6071472 6071547 6071472 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6071193 6071378 6071193 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6070747 6070905 6070747 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6070240 6070261 6070240 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6070027 6070144 6070027 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6069843 6069950 6069843 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6068832 6068941 6068832 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6068497 6068677 6068497 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6068308 6068416 6068308 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6068117 6068211 6068117 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6066983 6067081 6066983 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6066742 6066808 6066742 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6066372 6066457 6066372 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6066200 6066271 6066200 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6065990 6066187 6065990 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6065778 6065918 6065778 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6065246 6065357 6065246 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6064689 6064875 6064689 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6064132 6064326 6064132 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6063868 6063962 6063868 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6063645 6063858 6063645 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
chr3_4 CDS 6062777 6063050 6062777 ID=Msa0487310-mRNA-1:cds;Parent=Msa0487310-mRNA-1
Gene Sequence

>Msa0487310

ACGGATTTAGCTCACCAGAATCCTTTTACCATTGCTTTGAAGAACTTGGGCTGTAAAATTTCAGATAAACAGACCGCAGATGTTTCCGTCAAAATTAGCACGGCGACAAAAATATTAACTCCTTCACAAATAGAACAAGAATACCATGAATGGATATTAGAAATGCACAGACAATATGATGACGAAGCTGATGCCGGTGAGGATAAGCCAGTTATAGTTGTCAATCCACCGAACAAGGAAGCACTTGGCATTTCTGAAGATGTCATTAGAGTTCATCGGGTTCTGAAGAGAAAGGAGAAGTCTTGGAGTCATGGACAAAAAATAAAAGTGTTAAGGGGAGCATGTTCAGGGTTTCACTACAGCGATGTTTATGCAACCATAGAGTACTTTTTGCTTGAAGGTTTTGAAGGAGACCTGGGTGGAGAAGCTCGGATCATATGCAGGCCAATAGATATCCCAGAGGAGAATGGGTGCGCTCTTGATGTCAGTAATGAAGAAAACCCCACCTTGAATATCAGTAGCTCTTTGTCTTTACCTATAAGCGTGATCGACACCGAAAAGCTTGTAGCTGTTGATAATATTAAATGGAAGGATCAACTTAAAAAGATACAACAGAAATTGCCTGCTTCCATTGACTCGCCAGGCACAAACCAGTATAAACGAAAGCACGTGGACTCAATCAGTAGAAGTGTCGACAAAAGAATGACAGTGAAACGTATTCATTGTGCTTGGAAGTACAAACTTCTAACTAATGACCAATGTCAAGAGCTTGATGTCAGGGTTGGTTCTACCTTTCCATCCTTAGCCATTGCATGTTATGACATCCATGACAATCGAGCTCCGTTTAAAAAAATTCCGGATGACGTGACTGTTGAACTTCAGGCAGCAAAAGACTTGTATTTCAAAGTGCATGGAACAAAGACTCGCCTCTCATTTGATAAAATGACTTTAAAAATTATGGATGCAATGATTACAAGTAGTGAATTGGACAAGATAAGGCCCAGCTATAGAACTACTTTGATTATTGCTTCAGAAAATGTTCCGTTTTCAGTATCTTTTCCGTGTCGAGTTTCTCCTGGTTATCTCGAATATGCTAAACTGAAGCCTAATATAAGAGAAGACCAACTACTTCCGGGTTTCATTTTCAAGGAGTTAGCGTTTGAGATGTTTGATACATATAGAAACCATGTGTCTGAAGGCGTGGAGGTTAATATTCTTTTGGAAGGATTTGAAAGGTTAAATAATTGCAGTACTGTATACAAGGTAGATGATAAAGGAAAAATTGATCTTGGTGGTCAACTAAAGTTAACAGCAGGTTTTGGAGAAAATGCATCCATATCTGTTATGTTCGAAGGTAAACCAAAATTCAGGCAGGAGTTTTCACTTGCACGAAGAATCTTGCGAATCGCATCTGAGGTGCCTGATTTTTGTGCCACTGGTGGTCAGCTGGAAAACATTGAATTTGAAATTGTCAATGCTGATGGAGATATTCATTATGACGATCAAGAATGCCAGTTTCATATGCTTACAATTAAATCGGGCCTTTCTAATGCAGATGAATCGATACGGTACACTTTTAAGCATGGACGATGTACAGTTCCATCTATTCGTGTTCCAGAAATTGAGGGGACCTTTTGCTTTGAAGCTTCTCATTCGCAGTATACAGAGCTGTGTCTGACTGCAAAGGTTCAAGTTATCAAAATGTCCAATGCGAAAGATGTTGCACAACATCTATCCCCGGATAAGAATACTTTCCCCCTGAAGGAACTATCAACTCTTACTCATGACAATAATCTAATGATCTCTGTCCTCAATAGCGATGGCAAGAAATTTGACGACATTTGCCAACTTGGTCAGAAAATTAATGACTATGAAGATTGTCTTAAAAAAATTAATGAGCAAATGGATGAGACTCAGCAAGAGCTGTTGATGCTGCAAGGCAATGCCGACTTGTTGTTTGCCACCACCAAAGAAGAAATGACTACAAAAATTAAAAACATGGAAAACTCAGCAGCTTCTGTCCTATGTAGTCTCTCTGCACGTGAAAAGCAACAGAATCACTTCTTGGAAGATATAATTGGGGTCGTTGCCCTCCTTGGTTCTGTTCAGAATCCTGAGCTTAGCAGAATGTTAGCGGAATATCTTGGTGAAGATCAAATGCTGGGTGTTATTTGTAGATCTTTGGATACTGCAATTTCTCTTGAAAAATATAAACAAAATGGAGAAATTGATTATGTGCATGCTTTGCATGCTGCTGAAGCAGCTAATCTTGGAAAAGCTATAAGCAAACGTTTTCATGTTATGGGTTTTGAAGATATAAGGCCATATGATGGGAACTTGCAAAATGACTCTCAGAGAAAGCTTGCATTGCCCGATCCAAAGTTATCAAATAGGAGAACGCCAGAAGGCTTTATGGTTAATATGATTGATCTTGATTCCCATCACCTAGAGACAAGGACAGCATCGGGCCATGGGCTTCGTGAGACCGTTCTATTTAGCCTTTTCAAGAAGCTCCATGTTTACAAAACAAGCAAGAGTATGATGGCTGCTATTGAATGTATAGAGAATGGTGCTGTATCATTAGATGGCGGCATTATAAGAGAAAATGGAACTCTTTCTCTTGGCTTTGGGAATCCTTGCATATATTTTCCTTGTGGGAGCAAGATGGATATTCCTCCAGAAGCTACGCAAATGTTGAATCAGATTGAAGAAAAGAAAGCATTACTACTGAAGATTGAAAAAGGTGGTAAAAAAGTAACTAAACATCTGAAGAAGTCTCGAGAAAAGTTCAAGAAAAAAGAATCGAGATATAAAAAACATATGGATACAACAATGAAGCCTTTTGCTGAGGCATTGGAACAAAATCCAGAGATTGGGACACCTATGCTAGACTTAGGAGATTGA

Protein sequence

>Msa0487310

TDLAHQNPFTIALKNLGCKISDKQTADVSVKISTATKILTPSQIEQEYHEWILEMHRQYDDEADAGEDKPVIVVNPPNKEALGISEDVIRVHRVLKRKEKSWSHGQKIKVLRGACSGFHYSDVYATIEYFLLEGFEGDLGGEARIICRPIDIPEENGCALDVSNEENPTLNISSSLSLPISVIDTEKLVAVDNIKWKDQLKKIQQKLPASIDSPGTNQYKRKHVDSISRSVDKRMTVKRIHCAWKYKLLTNDQCQELDVRVGSTFPSLAIACYDIHDNRAPFKKIPDDVTVELQAAKDLYFKVHGTKTRLSFDKMTLKIMDAMITSSELDKIRPSYRTTLIIASENVPFSVSFPCRVSPGYLEYAKLKPNIREDQLLPGFIFKELAFEMFDTYRNHVSEGVEVNILLEGFERLNNCSTVYKVDDKGKIDLGGQLKLTAGFGENASISVMFEGKPKFRQEFSLARRILRIASEVPDFCATGGQLENIEFEIVNADGDIHYDDQECQFHMLTIKSGLSNADESIRYTFKHGRCTVPSIRVPEIEGTFCFEASHSQYTELCLTAKVQVIKMSNAKDVAQHLSPDKNTFPLKELSTLTHDNNLMISVLNSDGKKFDDICQLGQKINDYEDCLKKINEQMDETQQELLMLQGNADLLFATTKEEMTTKIKNMENSAASVLCSLSAREKQQNHFLEDIIGVVALLGSVQNPELSRMLAEYLGEDQMLGVICRSLDTAISLEKYKQNGEIDYVHALHAAEAANLGKAISKRFHVMGFEDIRPYDGNLQNDSQRKLALPDPKLSNRRTPEGFMVNMIDLDSHHLETRTASGHGLRETVLFSLFKKLHVYKTSKSMMAAIECIENGAVSLDGGIIRENGTLSLGFGNPCIYFPCGSKMDIPPEATQMLNQIEEKKALLLKIEKGGKKVTKHLKKSREKFKKKESRYKKHMDTTMKPFAEALEQNPEIGTPMLDLGD*