Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014080 | Msa0014090 | 0.807455 | 5.013119e-50 | -8.615850e-47 |
| Msa0014090 | Msa0766630 | 0.805023 | 1.630646e-49 | -8.615850e-47 |
| Msa0014090 | Msa0885280 | 0.805155 | 1.530115e-49 | -8.615850e-47 |
| Msa0014090 | Msa0885290 | 0.805724 | 1.162882e-49 | -8.615850e-47 |
| Msa0014090 | Msa0907260 | 0.812835 | 3.470437e-51 | -8.615850e-47 |
| Msa0014090 | Msa0956270 | 0.815106 | 1.095402e-51 | -8.615850e-47 |
| Msa0014090 | Msa1136090 | 0.804446 | 2.152346e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014090 | MtrunA17_Chr1g0164131 | 79.032 | 62 | 13 | 0 | 1 | 62 | 484 | 545 | 1.31e-26 | 103 |
| Msa0014090 | MtrunA17_Chr1g0164131 | 61.644 | 73 | 23 | 1 | 73 | 145 | 285 | 352 | 1.65e-17 | 78.2 |
| Msa0014090 | MtrunA17_Chr1g0164031 | 44.853 | 136 | 55 | 3 | 26 | 146 | 6 | 136 | 3.62e-21 | 87.0 |
| Msa0014090 | MtrunA17_Chr1g0163811 | 54.839 | 62 | 23 | 1 | 84 | 145 | 90 | 146 | 3.84e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014090 | AT1G66345.1 | 29.655 | 145 | 71 | 2 | 1 | 145 | 240 | 353 | 6.70e-11 | 59.3 |
Find 19 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATGCTGACAAGTATTTA+AGG | 0.159059 | 1_1:+22143090 | Msa0014090:CDS |
| TAAAGTTAGGTTAGGCGATT+TGG | 0.312974 | 1_1:+22144432 | Msa0014090:intron |
| ACATAAACAATCAACAAATA+AGG | 0.330227 | 1_1:-22144409 | None:intergenic |
| AAGTATTTAAGGACTATAAA+AGG | 0.339479 | 1_1:+22143101 | Msa0014090:CDS |
| ATTCAGTGTTTGTGCCGTTT+TGG | 0.340824 | 1_1:+22143059 | Msa0014090:CDS |
| TCACAATGAATTGGCCTCAT+TGG | 0.342113 | 1_1:+22143211 | Msa0014090:CDS |
| GAAGAATTTGATTGGTGATT+CGG | 0.368165 | 1_1:+22144384 | Msa0014090:CDS |
| TCTTCAGCTTCACAATGAAT+TGG | 0.380128 | 1_1:+22143202 | Msa0014090:CDS |
| GTCTCATATATACTCACATT+TGG | 0.390610 | 1_1:-22143137 | None:intergenic |
| TTTCATCATTTCCCTTCTGC+AGG | 0.399952 | 1_1:-22143175 | None:intergenic |
| GCAGAAGGGAAATGATGAAA+GGG | 0.515847 | 1_1:+22143178 | Msa0014090:CDS |
| TTGTTGCAGAAGAATTTGAT+TGG | 0.523742 | 1_1:+22144376 | Msa0014090:CDS |
| TGCAGAAGGGAAATGATGAA+AGG | 0.551649 | 1_1:+22143177 | Msa0014090:CDS |
| GATCGCTGGTCACCTGCAGA+AGG | 0.557140 | 1_1:+22143163 | Msa0014090:CDS |
| TTGGAGATGATGTTGAGAAG+AGG | 0.579266 | 1_1:+22144496 | Msa0014090:CDS |
| ATATATGAGACATTGATCGC+TGG | 0.614340 | 1_1:+22143149 | Msa0014090:CDS |
| ATCGCTGGTCACCTGCAGAA+GGG | 0.624789 | 1_1:+22143164 | Msa0014090:CDS |
| ACTATGTTGCAACTCCAATG+AGG | 0.668614 | 1_1:-22143225 | None:intergenic |
| ATAAAACACTCGTATAAACG+AGG | 0.746007 | 1_1:-22144545 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATTAAATGTTAGTTA+TGG | + | chr1_1:22143970-22143989 | Msa0014090:intron | 10.0% |
| !! | ATTAAATTAAATGTTAGTTA+TGG | + | chr1_1:22143970-22143989 | Msa0014090:intron | 10.0% |
| !!! | AGATGTATACATTATTTTTT+TGG | + | chr1_1:22144467-22144486 | Msa0014090:CDS | 15.0% |
| !!! | ATTATTTTTTTGGTAGAAAT+TGG | + | chr1_1:22144477-22144496 | Msa0014090:intron | 15.0% |
| !!! | AGATGTATACATTATTTTTT+TGG | + | chr1_1:22144467-22144486 | Msa0014090:CDS | 15.0% |
| !!! | ATTATTTTTTTGGTAGAAAT+TGG | + | chr1_1:22144477-22144496 | Msa0014090:intron | 15.0% |
| !! | AAGTATTTAAGGACTATAAA+AGG | + | chr1_1:22143101-22143120 | Msa0014090:CDS | 20.0% |
| !! | ACATAAACAATCAACAAATA+AGG | - | chr1_1:22144412-22144431 | None:intergenic | 20.0% |
| !! | TGATTGTTTATGTTAAAGTT+AGG | + | chr1_1:22144419-22144438 | Msa0014090:intron | 20.0% |
| !! | AAGTATTTAAGGACTATAAA+AGG | + | chr1_1:22143101-22143120 | Msa0014090:CDS | 20.0% |
| !! | ACATAAACAATCAACAAATA+AGG | - | chr1_1:22144412-22144431 | None:intergenic | 20.0% |
| !! | TGATTGTTTATGTTAAAGTT+AGG | + | chr1_1:22144419-22144438 | Msa0014090:intron | 20.0% |
| ! | AAAATGCTGACAAGTATTTA+AGG | + | chr1_1:22143090-22143109 | Msa0014090:CDS | 25.0% |
| !!! | TACTAAGTTTTAAGCAACTT+CGG | + | chr1_1:22143296-22143315 | Msa0014090:intron | 25.0% |
| ! | CATTTGATTGAATTAAACCT+TGG | + | chr1_1:22143560-22143579 | Msa0014090:intron | 25.0% |
| ! | TCATTATCCAAATTCACTTA+AGG | + | chr1_1:22143618-22143637 | Msa0014090:intron | 25.0% |
| !! | TAATTTGCCTTAAGTGAATT+TGG | - | chr1_1:22143628-22143647 | None:intergenic | 25.0% |
| !!! | GTTACTGAGATTTTTTTCAT+AGG | + | chr1_1:22143660-22143679 | Msa0014090:intron | 25.0% |
| ! | TTGAAACTTTGCATACAATA+TGG | + | chr1_1:22143729-22143748 | Msa0014090:intron | 25.0% |
| !!! | GGATGATTCTGTTTTTTTTA+AGG | + | chr1_1:22143750-22143769 | Msa0014090:intron | 25.0% |
| !! | ACATATATACTTCTCTCTTT+TGG | + | chr1_1:22143925-22143944 | Msa0014090:intron | 25.0% |
| !! | TTAGTTGATATAGAGAATGT+TGG | + | chr1_1:22144291-22144310 | Msa0014090:intron | 25.0% |
| ! | GTTTATGTTAAAGTTAGGTT+AGG | + | chr1_1:22144424-22144443 | Msa0014090:intron | 25.0% |
| !! | TATACGAGTGTTTTATAAGA+AGG | + | chr1_1:22144552-22144571 | Msa0014090:CDS | 25.0% |
| !! | ATACGAGTGTTTTATAAGAA+GGG | + | chr1_1:22144553-22144572 | Msa0014090:CDS | 25.0% |
| ! | AAAATGCTGACAAGTATTTA+AGG | + | chr1_1:22143090-22143109 | Msa0014090:CDS | 25.0% |
| !!! | TACTAAGTTTTAAGCAACTT+CGG | + | chr1_1:22143296-22143315 | Msa0014090:intron | 25.0% |
| ! | CATTTGATTGAATTAAACCT+TGG | + | chr1_1:22143560-22143579 | Msa0014090:intron | 25.0% |
| ! | TCATTATCCAAATTCACTTA+AGG | + | chr1_1:22143618-22143637 | Msa0014090:intron | 25.0% |
| !! | TAATTTGCCTTAAGTGAATT+TGG | - | chr1_1:22143628-22143647 | None:intergenic | 25.0% |
| !!! | GTTACTGAGATTTTTTTCAT+AGG | + | chr1_1:22143660-22143679 | Msa0014090:intron | 25.0% |
| ! | TTGAAACTTTGCATACAATA+TGG | + | chr1_1:22143729-22143748 | Msa0014090:intron | 25.0% |
| !!! | GGATGATTCTGTTTTTTTTA+AGG | + | chr1_1:22143750-22143769 | Msa0014090:intron | 25.0% |
| !! | ACATATATACTTCTCTCTTT+TGG | + | chr1_1:22143925-22143944 | Msa0014090:intron | 25.0% |
| !! | TTAGTTGATATAGAGAATGT+TGG | + | chr1_1:22144291-22144310 | Msa0014090:intron | 25.0% |
| ! | GTTTATGTTAAAGTTAGGTT+AGG | + | chr1_1:22144424-22144443 | Msa0014090:intron | 25.0% |
| !! | TATACGAGTGTTTTATAAGA+AGG | + | chr1_1:22144552-22144571 | Msa0014090:CDS | 25.0% |
| !! | ATACGAGTGTTTTATAAGAA+GGG | + | chr1_1:22144553-22144572 | Msa0014090:CDS | 25.0% |
| ! | CATTTTCAACCTTTCCAAAA+CGG | - | chr1_1:22143076-22143095 | None:intergenic | 30.0% |
| GTCTCATATATACTCACATT+TGG | - | chr1_1:22143140-22143159 | None:intergenic | 30.0% | |
| !!! | TATCATCTGGCTTTGTATTT+TGG | + | chr1_1:22143342-22143361 | Msa0014090:intron | 30.0% |
| ! | TTTGCTTTGTTCAAATTCGT+AGG | + | chr1_1:22143433-22143452 | Msa0014090:intron | 30.0% |
| ! | TTGCTTTGTTCAAATTCGTA+GGG | + | chr1_1:22143434-22143453 | Msa0014090:intron | 30.0% |
| ATTAGTAACAATTGTGAGTC+CGG | + | chr1_1:22143503-22143522 | Msa0014090:intron | 30.0% | |
| AAACAAAGAAGAACAAAACC+CGG | - | chr1_1:22143525-22143544 | None:intergenic | 30.0% | |
| !! | TGAAAAAACAAAGTGCTGTA+TGG | + | chr1_1:22143688-22143707 | Msa0014090:intron | 30.0% |
| ! | ACTTCTCTCTTTTGGATAAA+AGG | + | chr1_1:22143933-22143952 | Msa0014090:intron | 30.0% |
| ! | ATGTTAGTTATGGTTTTCAG+TGG | + | chr1_1:22143980-22143999 | Msa0014090:intron | 30.0% |
| GATATAGAGAATGTTGGAAA+AGG | + | chr1_1:22144297-22144316 | Msa0014090:intron | 30.0% | |
| TTGTTGCAGAAGAATTTGAT+TGG | + | chr1_1:22144376-22144395 | Msa0014090:CDS | 30.0% | |
| ! | GAAGAATTTGATTGGTGATT+CGG | + | chr1_1:22144384-22144403 | Msa0014090:CDS | 30.0% |
| ATAAAACACTCGTATAAACG+AGG | - | chr1_1:22144548-22144567 | None:intergenic | 30.0% | |
| ! | CATTTTCAACCTTTCCAAAA+CGG | - | chr1_1:22143076-22143095 | None:intergenic | 30.0% |
| GTCTCATATATACTCACATT+TGG | - | chr1_1:22143140-22143159 | None:intergenic | 30.0% | |
| !!! | TATCATCTGGCTTTGTATTT+TGG | + | chr1_1:22143342-22143361 | Msa0014090:intron | 30.0% |
| ! | TTTGCTTTGTTCAAATTCGT+AGG | + | chr1_1:22143433-22143452 | Msa0014090:intron | 30.0% |
| ! | TTGCTTTGTTCAAATTCGTA+GGG | + | chr1_1:22143434-22143453 | Msa0014090:intron | 30.0% |
| ATTAGTAACAATTGTGAGTC+CGG | + | chr1_1:22143503-22143522 | Msa0014090:intron | 30.0% | |
| AAACAAAGAAGAACAAAACC+CGG | - | chr1_1:22143525-22143544 | None:intergenic | 30.0% | |
| !! | TGAAAAAACAAAGTGCTGTA+TGG | + | chr1_1:22143688-22143707 | Msa0014090:intron | 30.0% |
| ! | ACTTCTCTCTTTTGGATAAA+AGG | + | chr1_1:22143933-22143952 | Msa0014090:intron | 30.0% |
| ! | ATGTTAGTTATGGTTTTCAG+TGG | + | chr1_1:22143980-22143999 | Msa0014090:intron | 30.0% |
| GATATAGAGAATGTTGGAAA+AGG | + | chr1_1:22144297-22144316 | Msa0014090:intron | 30.0% | |
| TTGTTGCAGAAGAATTTGAT+TGG | + | chr1_1:22144376-22144395 | Msa0014090:CDS | 30.0% | |
| ! | GAAGAATTTGATTGGTGATT+CGG | + | chr1_1:22144384-22144403 | Msa0014090:CDS | 30.0% |
| ATAAAACACTCGTATAAACG+AGG | - | chr1_1:22144548-22144567 | None:intergenic | 30.0% | |
| ATATATGAGACATTGATCGC+TGG | + | chr1_1:22143149-22143168 | Msa0014090:CDS | 35.0% | |
| TCTTCAGCTTCACAATGAAT+TGG | + | chr1_1:22143202-22143221 | Msa0014090:CDS | 35.0% | |
| !!! | TAACATGTGCTGCTTTTGAA+AGG | - | chr1_1:22143258-22143277 | None:intergenic | 35.0% |
| !! | GATGATAAACGTGAGTTGAT+GGG | - | chr1_1:22143329-22143348 | None:intergenic | 35.0% |
| ! | AGATGATAAACGTGAGTTGA+TGG | - | chr1_1:22143330-22143349 | None:intergenic | 35.0% |
| ATCAACTCACGTTTATCATC+TGG | + | chr1_1:22143329-22143348 | Msa0014090:intron | 35.0% | |
| TTAGTAACAATTGTGAGTCC+GGG | + | chr1_1:22143504-22143523 | Msa0014090:intron | 35.0% | |
| GTCTTCACAAATCAATTCAG+AGG | + | chr1_1:22143813-22143832 | Msa0014090:intron | 35.0% | |
| TGGAATTCATTGTCTTCGTT+TGG | + | chr1_1:22144000-22144019 | Msa0014090:intron | 35.0% | |
| TAAAGTTAGGTTAGGCGATT+TGG | + | chr1_1:22144432-22144451 | Msa0014090:intron | 35.0% | |
| ! | TGATGTTGAGAAGAGGTTTT+AGG | + | chr1_1:22144503-22144522 | Msa0014090:CDS | 35.0% |
| ! | GATGTTGAGAAGAGGTTTTA+GGG | + | chr1_1:22144504-22144523 | Msa0014090:CDS | 35.0% |
| ATATATGAGACATTGATCGC+TGG | + | chr1_1:22143149-22143168 | Msa0014090:CDS | 35.0% | |
| TCTTCAGCTTCACAATGAAT+TGG | + | chr1_1:22143202-22143221 | Msa0014090:CDS | 35.0% | |
| !!! | TAACATGTGCTGCTTTTGAA+AGG | - | chr1_1:22143258-22143277 | None:intergenic | 35.0% |
| !! | GATGATAAACGTGAGTTGAT+GGG | - | chr1_1:22143329-22143348 | None:intergenic | 35.0% |
| ! | AGATGATAAACGTGAGTTGA+TGG | - | chr1_1:22143330-22143349 | None:intergenic | 35.0% |
| ATCAACTCACGTTTATCATC+TGG | + | chr1_1:22143329-22143348 | Msa0014090:intron | 35.0% | |
| TTAGTAACAATTGTGAGTCC+GGG | + | chr1_1:22143504-22143523 | Msa0014090:intron | 35.0% | |
| GTCTTCACAAATCAATTCAG+AGG | + | chr1_1:22143813-22143832 | Msa0014090:intron | 35.0% | |
| TGGAATTCATTGTCTTCGTT+TGG | + | chr1_1:22144000-22144019 | Msa0014090:intron | 35.0% | |
| TAAAGTTAGGTTAGGCGATT+TGG | + | chr1_1:22144432-22144451 | Msa0014090:intron | 35.0% | |
| ! | TGATGTTGAGAAGAGGTTTT+AGG | + | chr1_1:22144503-22144522 | Msa0014090:CDS | 35.0% |
| ! | GATGTTGAGAAGAGGTTTTA+GGG | + | chr1_1:22144504-22144523 | Msa0014090:CDS | 35.0% |
| !!! | ATTCAGTGTTTGTGCCGTTT+TGG | + | chr1_1:22143059-22143078 | Msa0014090:CDS | 40.0% |
| TTTCATCATTTCCCTTCTGC+AGG | - | chr1_1:22143178-22143197 | None:intergenic | 40.0% | |
| TGCAGAAGGGAAATGATGAA+AGG | + | chr1_1:22143177-22143196 | Msa0014090:CDS | 40.0% | |
| GCAGAAGGGAAATGATGAAA+GGG | + | chr1_1:22143178-22143197 | Msa0014090:CDS | 40.0% | |
| ! | TCACAATGAATTGGCCTCAT+TGG | + | chr1_1:22143211-22143230 | Msa0014090:CDS | 40.0% |
| ACTATGTTGCAACTCCAATG+AGG | - | chr1_1:22143228-22143247 | None:intergenic | 40.0% | |
| !!! | CATCTGGCTTTGTATTTTGG+AGG | + | chr1_1:22143345-22143364 | Msa0014090:intron | 40.0% |
| TGATCATAACAGTGCAACCA+AGG | - | chr1_1:22143580-22143599 | None:intergenic | 40.0% | |
| ATAGCACAGAGTCATATCAG+TGG | + | chr1_1:22143889-22143908 | Msa0014090:intron | 40.0% | |
| ! | AGATGCGCGTTTTACACTAT+TGG | - | chr1_1:22144106-22144125 | None:intergenic | 40.0% |
| ! | TTGAAAACAGTGCGTTTTGG+TGG | - | chr1_1:22144190-22144209 | None:intergenic | 40.0% |
| ! | GTGTTGAAAACAGTGCGTTT+TGG | - | chr1_1:22144193-22144212 | None:intergenic | 40.0% |
| AACACTTCTCAGTTTCTCGA+TGG | + | chr1_1:22144267-22144286 | Msa0014090:intron | 40.0% | |
| ACACTTCTCAGTTTCTCGAT+GGG | + | chr1_1:22144268-22144287 | Msa0014090:intron | 40.0% | |
| GAGAATGTTGGAAAAGGAAG+AGG | + | chr1_1:22144303-22144322 | Msa0014090:intron | 40.0% | |
| GAAGAGGAAAAAGACGATGA+AGG | + | chr1_1:22144319-22144338 | Msa0014090:intron | 40.0% | |
| !! | AGGCGATTTGGATTTTGCTT+TGG | + | chr1_1:22144444-22144463 | Msa0014090:CDS | 40.0% |
| TTGGAGATGATGTTGAGAAG+AGG | + | chr1_1:22144496-22144515 | Msa0014090:CDS | 40.0% | |
| !!! | ATTCAGTGTTTGTGCCGTTT+TGG | + | chr1_1:22143059-22143078 | Msa0014090:CDS | 40.0% |
| TTTCATCATTTCCCTTCTGC+AGG | - | chr1_1:22143178-22143197 | None:intergenic | 40.0% | |
| TGCAGAAGGGAAATGATGAA+AGG | + | chr1_1:22143177-22143196 | Msa0014090:CDS | 40.0% | |
| GCAGAAGGGAAATGATGAAA+GGG | + | chr1_1:22143178-22143197 | Msa0014090:CDS | 40.0% | |
| ! | TCACAATGAATTGGCCTCAT+TGG | + | chr1_1:22143211-22143230 | Msa0014090:CDS | 40.0% |
| ACTATGTTGCAACTCCAATG+AGG | - | chr1_1:22143228-22143247 | None:intergenic | 40.0% | |
| !!! | CATCTGGCTTTGTATTTTGG+AGG | + | chr1_1:22143345-22143364 | Msa0014090:intron | 40.0% |
| TGATCATAACAGTGCAACCA+AGG | - | chr1_1:22143580-22143599 | None:intergenic | 40.0% | |
| ATAGCACAGAGTCATATCAG+TGG | + | chr1_1:22143889-22143908 | Msa0014090:intron | 40.0% | |
| ! | AGATGCGCGTTTTACACTAT+TGG | - | chr1_1:22144106-22144125 | None:intergenic | 40.0% |
| ! | TTGAAAACAGTGCGTTTTGG+TGG | - | chr1_1:22144190-22144209 | None:intergenic | 40.0% |
| ! | GTGTTGAAAACAGTGCGTTT+TGG | - | chr1_1:22144193-22144212 | None:intergenic | 40.0% |
| AACACTTCTCAGTTTCTCGA+TGG | + | chr1_1:22144267-22144286 | Msa0014090:intron | 40.0% | |
| ACACTTCTCAGTTTCTCGAT+GGG | + | chr1_1:22144268-22144287 | Msa0014090:intron | 40.0% | |
| GAGAATGTTGGAAAAGGAAG+AGG | + | chr1_1:22144303-22144322 | Msa0014090:intron | 40.0% | |
| GAAGAGGAAAAAGACGATGA+AGG | + | chr1_1:22144319-22144338 | Msa0014090:intron | 40.0% | |
| !! | AGGCGATTTGGATTTTGCTT+TGG | + | chr1_1:22144444-22144463 | Msa0014090:CDS | 40.0% |
| TTGGAGATGATGTTGAGAAG+AGG | + | chr1_1:22144496-22144515 | Msa0014090:CDS | 40.0% | |
| !!! | GTGTTTGTGCCGTTTTGGAA+AGG | + | chr1_1:22143064-22143083 | Msa0014090:CDS | 45.0% |
| ACTTCACTCACATACAAGCG+CGG | + | chr1_1:22144227-22144246 | Msa0014090:intron | 45.0% | |
| !!! | GTGTTTGTGCCGTTTTGGAA+AGG | + | chr1_1:22143064-22143083 | Msa0014090:CDS | 45.0% |
| ACTTCACTCACATACAAGCG+CGG | + | chr1_1:22144227-22144246 | Msa0014090:intron | 45.0% | |
| ATCGCTGGTCACCTGCAGAA+GGG | + | chr1_1:22143164-22143183 | Msa0014090:CDS | 55.0% | |
| ATCGCTGGTCACCTGCAGAA+GGG | + | chr1_1:22143164-22143183 | Msa0014090:CDS | 55.0% | |
| GATCGCTGGTCACCTGCAGA+AGG | + | chr1_1:22143163-22143182 | Msa0014090:CDS | 60.0% | |
| GATCGCTGGTCACCTGCAGA+AGG | + | chr1_1:22143163-22143182 | Msa0014090:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 22143056 | 22144582 | 22143056 | ID=Msa0014090;Name=Msa0014090 |
| chr1_1 | mRNA | 22143056 | 22144582 | 22143056 | ID=Msa0014090-mRNA-1;Parent=Msa0014090;Name=Msa0014090-mRNA-1;_AED=0.43;_eAED=0.50;_QI=0|0|0|1|0|0.25|4|0|146 |
| chr1_1 | exon | 22143056 | 22143245 | 22143056 | ID=Msa0014090-mRNA-1:exon:7775;Parent=Msa0014090-mRNA-1 |
| chr1_1 | exon | 22144323 | 22144435 | 22144323 | ID=Msa0014090-mRNA-1:exon:7776;Parent=Msa0014090-mRNA-1 |
| chr1_1 | exon | 22144441 | 22144488 | 22144441 | ID=Msa0014090-mRNA-1:exon:7777;Parent=Msa0014090-mRNA-1 |
| chr1_1 | exon | 22144493 | 22144582 | 22144493 | ID=Msa0014090-mRNA-1:exon:7778;Parent=Msa0014090-mRNA-1 |
| chr1_1 | CDS | 22143056 | 22143245 | 22143056 | ID=Msa0014090-mRNA-1:cds;Parent=Msa0014090-mRNA-1 |
| chr1_1 | CDS | 22144323 | 22144435 | 22144323 | ID=Msa0014090-mRNA-1:cds;Parent=Msa0014090-mRNA-1 |
| chr1_1 | CDS | 22144441 | 22144488 | 22144441 | ID=Msa0014090-mRNA-1:cds;Parent=Msa0014090-mRNA-1 |
| chr1_1 | CDS | 22144493 | 22144582 | 22144493 | ID=Msa0014090-mRNA-1:cds;Parent=Msa0014090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
