Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017090 | XP_013446794.1 | 94.100 | 1712 | 91 | 3 | 1 | 1712 | 1 | 1702 | 0.0 | 3284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017090 | sp|F4JTS8|NOV_ARATH | 33.588 | 393 | 194 | 15 | 8 | 376 | 1162 | 1511 | 7.28e-37 | 157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017090 | Msa0065370 | 0.961257 | 1.714740e-119 | -8.615850e-47 |
| Msa0017090 | Msa0110680 | 0.985501 | 9.184202e-164 | -8.615850e-47 |
| Msa0017090 | Msa0156990 | 0.973402 | 2.288139e-136 | -8.615850e-47 |
| Msa0017090 | Msa0205440 | 0.837636 | 4.624870e-57 | -8.615850e-47 |
| Msa0017090 | Msa0286940 | 0.863203 | 2.943848e-64 | -8.615850e-47 |
| Msa0017090 | Msa0325540 | 0.817645 | 2.962483e-52 | -8.615850e-47 |
| Msa0017090 | Msa0477390 | 0.801813 | 7.543556e-49 | -8.615850e-47 |
| Msa0017090 | Msa0703710 | 0.824619 | 7.315828e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017090 | MtrunA17_Chr8g0382131 | 94.100 | 1712 | 91 | 3 | 1 | 1712 | 1 | 1702 | 0.0 | 3284 |
| Msa0017090 | MtrunA17_Chr8g0338441 | 73.559 | 1717 | 434 | 10 | 1 | 1712 | 1 | 1702 | 0.0 | 2555 |
| Msa0017090 | MtrunA17_Chr3g0079151 | 73.384 | 1717 | 438 | 10 | 3 | 1712 | 5 | 1709 | 0.0 | 2547 |
| Msa0017090 | MtrunA17_Chr8g0338311 | 71.155 | 1723 | 462 | 14 | 1 | 1712 | 4 | 1702 | 0.0 | 2442 |
| Msa0017090 | MtrunA17_Chr8g0338331 | 68.754 | 1661 | 498 | 10 | 54 | 1711 | 13 | 1655 | 0.0 | 2288 |
| Msa0017090 | MtrunA17_Chr2g0311121 | 90.148 | 944 | 85 | 3 | 768 | 1711 | 648 | 1583 | 0.0 | 1749 |
| Msa0017090 | MtrunA17_Chr2g0311121 | 91.176 | 646 | 46 | 4 | 1 | 642 | 1 | 639 | 0.0 | 1189 |
| Msa0017090 | MtrunA17_Chr6g0454611 | 64.322 | 782 | 214 | 12 | 330 | 1100 | 1 | 728 | 0.0 | 958 |
| Msa0017090 | MtrunA17_Chr6g0454611 | 46.745 | 768 | 343 | 13 | 968 | 1710 | 354 | 1080 | 0.0 | 624 |
| Msa0017090 | MtrunA17_Chr8g0338301 | 87.194 | 531 | 64 | 2 | 49 | 575 | 1 | 531 | 0.0 | 941 |
| Msa0017090 | MtrunA17_Chr8g0338291 | 60.772 | 492 | 137 | 4 | 888 | 1345 | 71 | 540 | 0.0 | 590 |
| Msa0017090 | MtrunA17_Chr8g0338291 | 46.820 | 566 | 230 | 11 | 701 | 1227 | 1 | 534 | 4.01e-142 | 450 |
| Msa0017090 | MtrunA17_Chr8g0338281 | 75.556 | 225 | 51 | 2 | 1324 | 1548 | 9 | 229 | 2.59e-110 | 350 |
| Msa0017090 | MtrunA17_Chr6g0454601 | 75.862 | 232 | 54 | 2 | 49 | 279 | 1 | 231 | 8.13e-105 | 334 |
| Msa0017090 | MtrunA17_Chr8g0338271 | 84.783 | 138 | 20 | 1 | 1576 | 1712 | 1 | 138 | 1.46e-73 | 241 |
| Msa0017090 | MtrunA17_Chr8g0378271 | 30.835 | 467 | 246 | 18 | 8 | 445 | 1144 | 1562 | 9.78e-44 | 176 |
| Msa0017090 | MtrunA17_Chr8g0338341 | 72.222 | 54 | 14 | 1 | 1 | 53 | 4 | 57 | 2.35e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017090 | AT3G48770.1 | 50.318 | 1727 | 812 | 24 | 3 | 1709 | 195 | 1895 | 0.0 | 1682 |
| Msa0017090 | AT3G48770.2 | 50.318 | 1727 | 812 | 24 | 3 | 1709 | 195 | 1895 | 0.0 | 1682 |
| Msa0017090 | AT3G28020.1 | 42.222 | 270 | 93 | 7 | 155 | 423 | 36 | 243 | 1.81e-53 | 188 |
| Msa0017090 | AT4G13750.1 | 33.588 | 393 | 194 | 15 | 8 | 376 | 1162 | 1511 | 7.40e-38 | 157 |
Find 373 sgRNAs with CRISPR-Local
Find 510 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTGGACTTCAAGATTTA+AGG | 0.097894 | 1_1:+28334235 | Msa0017090:CDS |
| CTTTGTTCTCATGCACTTTA+TGG | 0.127519 | 1_1:+28338104 | Msa0017090:three_prime_UTR |
| CATATGGACTCGATGTTATT+TGG | 0.150304 | 1_1:-28332605 | None:intergenic |
| CGGATTCAAGAGTGTGTTTC+TGG | 0.154146 | 1_1:+28333035 | Msa0017090:CDS |
| TTCTTAATTCGCTCGCCATT+GGG | 0.158353 | 1_1:+28335121 | Msa0017090:CDS |
| CTTGAGGCTCATCCAACTTC+TGG | 0.160539 | 1_1:-28337661 | None:intergenic |
| CTTCTTTCACTTCTATTTGA+TGG | 0.188422 | 1_1:+28338080 | Msa0017090:three_prime_UTR |
| ATAAAGCTGCCAAGAAAATT+TGG | 0.198820 | 1_1:+28336823 | Msa0017090:CDS |
| TGTCATTTCTTTCTTGTTGC+AGG | 0.200002 | 1_1:+28336010 | Msa0017090:CDS |
| TGGCTTAAAGTTACCGTTAA+TGG | 0.216475 | 1_1:+28335076 | Msa0017090:CDS |
| TCTTTGCTTCCTGTTGTTAC+AGG | 0.221014 | 1_1:-28337158 | None:intergenic |
| TATTTGTGCCCAAATGTTTC+AGG | 0.227165 | 1_1:-28337100 | None:intergenic |
| GGCTTCTCCTCAACCCATTC+AGG | 0.234048 | 1_1:-28333147 | None:intergenic |
| AAGTAAGATTGATCAATAAA+AGG | 0.238617 | 1_1:-28335523 | None:intergenic |
| GTCAGTCTGATGCTTGTTCT+TGG | 0.242783 | 1_1:+28334375 | Msa0017090:CDS |
| GAGGAAATCAATAAGCTTTC+CGG | 0.243962 | 1_1:-28334873 | None:intergenic |
| GAAAGAGATTGTCCAGAAAT+TGG | 0.251652 | 1_1:+28336421 | Msa0017090:CDS |
| ATGTGTTCCATCGGCCTTTA+TGG | 0.256561 | 1_1:+28333749 | Msa0017090:CDS |
| TCTTATGCAGGCCAATTTAC+AGG | 0.257247 | 1_1:+28334848 | Msa0017090:CDS |
| CTGATTGACGAGAGCTTCTA+TGG | 0.258477 | 1_1:+28335184 | Msa0017090:CDS |
| CTATGAAGCCTCTCCTGATT+TGG | 0.260100 | 1_1:-28333582 | None:intergenic |
| GCCCATTTGCTAACATTTGC+AGG | 0.260373 | 1_1:-28334752 | None:intergenic |
| ATGCCACTTGTTGACAACTA+TGG | 0.266114 | 1_1:+28334695 | Msa0017090:CDS |
| CTCTCTGAATTGATCACATT+GGG | 0.266913 | 1_1:+28337767 | Msa0017090:CDS |
| GAAGGAAAATTCAGACATTT+AGG | 0.266941 | 1_1:-28336300 | None:intergenic |
| GCTTTCCGGAACCTGTAAAT+TGG | 0.268504 | 1_1:-28334859 | None:intergenic |
| CCAGACGTGGGGCTGCATTT+TGG | 0.269695 | 1_1:+28335810 | Msa0017090:CDS |
| TTAAGTGCTTGATAACAATT+TGG | 0.270152 | 1_1:-28335618 | None:intergenic |
| CAATTCTCTTGGATAATAAA+TGG | 0.271572 | 1_1:+28333709 | Msa0017090:CDS |
| GTAAGAAACAAAAGAACTTC+TGG | 0.271766 | 1_1:-28333291 | None:intergenic |
| TTAGCAATGGATATCAAATA+AGG | 0.274863 | 1_1:+28333079 | Msa0017090:CDS |
| TTGATGATTATGTTGATCTT+TGG | 0.277427 | 1_1:+28337012 | Msa0017090:CDS |
| CCATATAAAATGCATTGTTT+TGG | 0.280327 | 1_1:-28336129 | None:intergenic |
| AACTGGACTTCAAGATTTAA+GGG | 0.282349 | 1_1:+28334236 | Msa0017090:CDS |
| CTTGTTCTTGGCTGATCAAT+TGG | 0.287319 | 1_1:+28334387 | Msa0017090:CDS |
| CTGCATAAGATGAGGAATTT+AGG | 0.289962 | 1_1:-28334835 | None:intergenic |
| ATGTGTCTTCAACCAATTTC+TGG | 0.298209 | 1_1:-28336433 | None:intergenic |
| GCAGGCCAATTTACAGGTTC+CGG | 0.302505 | 1_1:+28334854 | Msa0017090:CDS |
| TTCTTCAGATGAAGGTTATC+AGG | 0.305500 | 1_1:-28337215 | None:intergenic |
| TCTTGTCTGGTTCCATCTTC+AGG | 0.306825 | 1_1:-28337481 | None:intergenic |
| GATGTTTATCCTGAAACATT+TGG | 0.311080 | 1_1:+28337091 | Msa0017090:CDS |
| TTTCTCACCTTCATGCTTCT+GGG | 0.320079 | 1_1:-28334483 | None:intergenic |
| GATGACTTCTCCTGAGATAT+TGG | 0.326955 | 1_1:-28335360 | None:intergenic |
| GTAGGCTGCTGTCTGAATTC+TGG | 0.327095 | 1_1:+28333979 | Msa0017090:CDS |
| CATAGAAGCTCTCGTCAATC+AGG | 0.330641 | 1_1:-28335183 | None:intergenic |
| TGAAGACACATGCTGGTTAT+AGG | 0.336295 | 1_1:+28336445 | Msa0017090:CDS |
| GTGATTGATCATAAAGTCTA+TGG | 0.339400 | 1_1:+28335853 | Msa0017090:CDS |
| GGTTTGATTAAGCTCATTCT+TGG | 0.339656 | 1_1:+28337440 | Msa0017090:CDS |
| ATCTCTTCAACGTGTTCTTT+TGG | 0.340965 | 1_1:-28331063 | None:intergenic |
| CATGTGGAAGCAAAAGTTTC+CGG | 0.342746 | 1_1:+28333494 | Msa0017090:CDS |
| CAAATCAGGAGAGGCTTCAT+AGG | 0.348815 | 1_1:+28333583 | Msa0017090:CDS |
| AATGCAATGCATCAAATTCT+TGG | 0.349981 | 1_1:+28335693 | Msa0017090:CDS |
| CCTTGTCCACATTGCAGTCT+TGG | 0.356946 | 1_1:+28333114 | Msa0017090:CDS |
| TAAAGACATCTGAAGGTCTT+AGG | 0.357258 | 1_1:+28335437 | Msa0017090:CDS |
| TTACCTTTGCCATGGAAGTC+AGG | 0.359808 | 1_1:+28336976 | Msa0017090:CDS |
| GTTCTTAATTCGCTCGCCAT+TGG | 0.360490 | 1_1:+28335120 | Msa0017090:CDS |
| TCATCTCCTATTGGACGAAT+TGG | 0.367948 | 1_1:+28335378 | Msa0017090:CDS |
| CTCAAATGATGAAATTTCAA+TGG | 0.367975 | 1_1:-28333847 | None:intergenic |
| TATGAAGCCTCTCCTGATTT+GGG | 0.372971 | 1_1:-28333581 | None:intergenic |
| ATGTTTATCCTGAAACATTT+GGG | 0.373249 | 1_1:+28337092 | Msa0017090:CDS |
| TACAAAGAAAGATGACAAAA+TGG | 0.374290 | 1_1:+28337604 | Msa0017090:CDS |
| GAAGAGGAGTTGAAAACAAT+TGG | 0.375017 | 1_1:+28335226 | Msa0017090:CDS |
| AATCCAATCCAAAAGCAAAA+AGG | 0.378620 | 1_1:-28334987 | None:intergenic |
| ACAGCTTCATGCCTCTTGTC+TGG | 0.379764 | 1_1:-28337494 | None:intergenic |
| AGAGAATGGTTTACTTCTCT+TGG | 0.380192 | 1_1:-28330987 | None:intergenic |
| GGTATCCTCAGCAGGACTTT+GGG | 0.382002 | 1_1:+28337267 | Msa0017090:CDS |
| TATAGTCTATCGCTGTCATC+AGG | 0.382508 | 1_1:+28337572 | Msa0017090:CDS |
| CTTGAAAGTTGCTGTTTGAC+AGG | 0.384565 | 1_1:-28333261 | None:intergenic |
| ACTTGATTGTTTCTAATCCT+TGG | 0.387536 | 1_1:+28334777 | Msa0017090:CDS |
| GTTGACATAAAGCAGATATA+TGG | 0.387873 | 1_1:+28333177 | Msa0017090:CDS |
| AGCAAAGAAAACACACTTTC+AGG | 0.390400 | 1_1:-28336342 | None:intergenic |
| TTCTTGTTGCAGGCTGCTGA+AGG | 0.391196 | 1_1:+28336020 | Msa0017090:CDS |
| TGTTCCTATTGAGACATATA+CGG | 0.391305 | 1_1:+28333923 | Msa0017090:CDS |
| CAGAAAGAATTCAATGCAAT+CGG | 0.392179 | 1_1:+28336576 | Msa0017090:CDS |
| ATGACAAGTGCTGGAAATTC+TGG | 0.393370 | 1_1:+28337069 | Msa0017090:CDS |
| TTTACATGCTTCCTCACAAC+TGG | 0.393777 | 1_1:-28335257 | None:intergenic |
| AAAGGATGCTCCTTGCTTGC+CGG | 0.394081 | 1_1:+28336618 | Msa0017090:CDS |
| GAGGAAGCATGTAAATTCAT+TGG | 0.395863 | 1_1:+28335265 | Msa0017090:CDS |
| ACAGCTGAAAACCCAGCATT+TGG | 0.396009 | 1_1:-28334938 | None:intergenic |
| GAAGAGGAGCTGAAGTTGTT+AGG | 0.396166 | 1_1:+28335568 | Msa0017090:CDS |
| TTGTAATGAAATGAAGTATC+AGG | 0.397922 | 1_1:-28331018 | None:intergenic |
| ATTCGTCCAATTCGTCCAAT+AGG | 0.399046 | 1_1:-28335384 | None:intergenic |
| GGCAAGACAATTGTTGTAGT+TGG | 0.402161 | 1_1:-28333216 | None:intergenic |
| CAGGAGAAGTCATCTCCTAT+TGG | 0.404063 | 1_1:+28335369 | Msa0017090:CDS |
| GGATCTGTATTGAATGATTC+CGG | 0.406210 | 1_1:+28335469 | Msa0017090:CDS |
| AATGAAAATTATGTTGAGCT+TGG | 0.406604 | 1_1:+28334803 | Msa0017090:CDS |
| TTCTTGGCAGCTTTATCCTC+AGG | 0.409894 | 1_1:-28336816 | None:intergenic |
| CCACTTCTGATTATGTATAA+TGG | 0.411741 | 1_1:-28336076 | None:intergenic |
| TTTATTGATCAATCTTACTT+TGG | 0.412553 | 1_1:+28335526 | Msa0017090:CDS |
| ATGTTGATCTTTGGAATGAA+TGG | 0.413066 | 1_1:+28337021 | Msa0017090:CDS |
| TCAAGCTCCAGTATCAAGTT+TGG | 0.413665 | 1_1:+28333803 | Msa0017090:CDS |
| GTTGACCTTATCCTGCTTCA+AGG | 0.415637 | 1_1:-28333238 | None:intergenic |
| GCATTCAAAACACTTGTTGT+AGG | 0.419093 | 1_1:+28333774 | Msa0017090:CDS |
| TGCCTGCAAATGTTAGCAAA+TGG | 0.420934 | 1_1:+28334750 | Msa0017090:CDS |
| GAATGAATGGGAGAGTTCAT+TGG | 0.422978 | 1_1:+28337034 | Msa0017090:CDS |
| TGGTATCCTCAGCAGGACTT+TGG | 0.423557 | 1_1:+28337266 | Msa0017090:CDS |
| AGATCCTCAGTCAAAGGATT+AGG | 0.423767 | 1_1:-28331117 | None:intergenic |
| TGATCGTCCAACACCGCATA+TGG | 0.432526 | 1_1:-28332621 | None:intergenic |
| GACACTGGCCTTCCCAAATC+AGG | 0.433616 | 1_1:+28333569 | Msa0017090:CDS |
| CTTGCCCTTGAAGCAGGATA+AGG | 0.434967 | 1_1:+28333233 | Msa0017090:CDS |
| CATATATCTCCTCCAAATGC+TGG | 0.437395 | 1_1:+28334926 | Msa0017090:CDS |
| CTTAACCTATCTTCTCATGA+TGG | 0.437612 | 1_1:+28334041 | Msa0017090:CDS |
| TGCTTGTTCTAGCCTGAAGA+TGG | 0.437919 | 1_1:+28337469 | Msa0017090:CDS |
| TTGGATATATAGTTCCTGAA+TGG | 0.438129 | 1_1:+28333133 | Msa0017090:CDS |
| GGTACTTGTCTGAATACAAC+TGG | 0.439001 | 1_1:+28336790 | Msa0017090:intron |
| CGAATTAAGAACGACTTTGA+AGG | 0.439260 | 1_1:-28335109 | None:intergenic |
| AGTAAGATTGATCAATAAAA+GGG | 0.440490 | 1_1:-28335522 | None:intergenic |
| TGCTTTATGTCAACAAGGGT+TGG | 0.441323 | 1_1:-28333168 | None:intergenic |
| ATACGAGCCAAACTTGATAC+TGG | 0.441512 | 1_1:-28333810 | None:intergenic |
| ATCTAGGGAGACAATTCTCT+TGG | 0.448129 | 1_1:+28333698 | Msa0017090:CDS |
| CTTTCTGAACTCATCATCAA+TGG | 0.449609 | 1_1:-28336403 | None:intergenic |
| TCAAATGATGAAATTTCAAT+GGG | 0.450231 | 1_1:-28333846 | None:intergenic |
| TATGCCAGAAAGCACTCAAA+AGG | 0.450642 | 1_1:+28334445 | Msa0017090:CDS |
| GATGTCATATAACTTAGAAA+TGG | 0.450996 | 1_1:-28337297 | None:intergenic |
| TCTTTCTTTAATCCAACTGA+TGG | 0.451371 | 1_1:+28336507 | Msa0017090:CDS |
| TACAAATTCTGAGCATATGT+TGG | 0.452666 | 1_1:-28338177 | None:intergenic |
| CTTGTTGCAGGCTGCTGAAG+GGG | 0.455627 | 1_1:+28336022 | Msa0017090:CDS |
| CATAGGGGTAAAAGCTCACC+AGG | 0.459073 | 1_1:+28333600 | Msa0017090:CDS |
| GAGAACAGATGTTGAAGAAT+GGG | 0.466265 | 1_1:+28333542 | Msa0017090:CDS |
| TTACAATTGCAGAAGATCAA+TGG | 0.466513 | 1_1:+28331035 | Msa0017090:exon |
| AATTGTCTTGCCCTTGAAGC+AGG | 0.467045 | 1_1:+28333227 | Msa0017090:CDS |
| TTAAACAAGTGACCGTTGAT+TGG | 0.468157 | 1_1:+28334129 | Msa0017090:CDS |
| TCAAAAGGCTATCTTGAGAT+TGG | 0.468445 | 1_1:+28334460 | Msa0017090:CDS |
| TCTTGTTGCAGGCTGCTGAA+GGG | 0.469977 | 1_1:+28336021 | Msa0017090:CDS |
| CAGTCCACCTTCAGTTCCAT+TGG | 0.470121 | 1_1:-28336850 | None:intergenic |
| TTGTGATGCTACTTTCCATC+CGG | 0.471037 | 1_1:-28335488 | None:intergenic |
| GGAGAACAGATGTTGAAGAA+TGG | 0.473141 | 1_1:+28333541 | Msa0017090:CDS |
| AGCAAACTACCTGTAACAAC+AGG | 0.473796 | 1_1:+28337149 | Msa0017090:CDS |
| AGACTATAGCTTACCATGAC+CGG | 0.473989 | 1_1:-28337557 | None:intergenic |
| TGGATATATAGTTCCTGAAT+GGG | 0.476182 | 1_1:+28333134 | Msa0017090:CDS |
| CCAAAATGCAGCCCCACGTC+TGG | 0.476751 | 1_1:-28335810 | None:intergenic |
| AGAAAATGACGTTGATTGAA+TGG | 0.477081 | 1_1:+28334501 | Msa0017090:CDS |
| AAATACAGAGAAGAAACTTT+CGG | 0.478451 | 1_1:+28337118 | Msa0017090:CDS |
| TTAAACAGCAAACACATCTC+TGG | 0.478567 | 1_1:-28336471 | None:intergenic |
| ATAAGCCTGGTGAAGTTAGT+AGG | 0.479139 | 1_1:+28333961 | Msa0017090:CDS |
| GTTTGATTAAGCTCATTCTT+GGG | 0.481039 | 1_1:+28337441 | Msa0017090:CDS |
| AATTGTCGCATGACAAGTGC+TGG | 0.482123 | 1_1:+28337060 | Msa0017090:CDS |
| CAAGTACACTCCTTCGTCTC+GGG | 0.483228 | 1_1:-28334018 | None:intergenic |
| TCCTCCCATCATGAGAAGAT+AGG | 0.486346 | 1_1:-28334046 | None:intergenic |
| ATAAAATATGTGGCTTCTGA+TGG | 0.487168 | 1_1:+28334284 | Msa0017090:CDS |
| TGCTCCGTATATGTCTCAAT+AGG | 0.487338 | 1_1:-28333927 | None:intergenic |
| GATCAACAAAGAAAGGCAAT+AGG | 0.488812 | 1_1:+28332639 | Msa0017090:CDS |
| CCTCTCTGAATTGATCACAT+TGG | 0.489488 | 1_1:+28337766 | Msa0017090:CDS |
| TGTTGATCTTTGGAATGAAT+GGG | 0.493934 | 1_1:+28337022 | Msa0017090:CDS |
| CATTAACTTCTCTTACAGAA+AGG | 0.494102 | 1_1:-28333326 | None:intergenic |
| TGCTTCTCTCTTCAAACAGA+AGG | 0.494400 | 1_1:+28335954 | Msa0017090:CDS |
| TATTCCATTGATAAAATATG+TGG | 0.495033 | 1_1:+28334274 | Msa0017090:CDS |
| TGATTGTTTCTAATCCTTGG+AGG | 0.495055 | 1_1:+28334780 | Msa0017090:CDS |
| TGAAGATATTGAATTTCTGA+TGG | 0.495113 | 1_1:+28337811 | Msa0017090:CDS |
| AGAGAAGTTAATGAAAATGC+TGG | 0.495441 | 1_1:+28333336 | Msa0017090:CDS |
| GTACTTGAATTAGTTCCATC+AGG | 0.496190 | 1_1:-28331194 | None:intergenic |
| CTCGGCGGAGAGATTCTTAA+CGG | 0.496567 | 1_1:-28331148 | None:intergenic |
| CTCAAGGTGACCGGCAAGCA+AGG | 0.496770 | 1_1:-28336628 | None:intergenic |
| AATAGGAGCAGTGGTTACAT+AGG | 0.497331 | 1_1:+28332656 | Msa0017090:CDS |
| GCTGAATGATGGTGTTGAAA+TGG | 0.500210 | 1_1:+28337379 | Msa0017090:CDS |
| TGTCAAAGAGGCCAAATTTG+AGG | 0.501485 | 1_1:-28335650 | None:intergenic |
| AGGAGGACTGTATCCATTAA+CGG | 0.501665 | 1_1:-28335089 | None:intergenic |
| GCCTGCAAATGTTAGCAAAT+GGG | 0.502939 | 1_1:+28334751 | Msa0017090:CDS |
| ATGAAAGGGAGACAAGTAAT+CGG | 0.503529 | 1_1:-28336174 | None:intergenic |
| TACCTTTGCCATGGAAGTCA+GGG | 0.503912 | 1_1:+28336977 | Msa0017090:CDS |
| TCAATAAAAGGCCCATCAGT+TGG | 0.504851 | 1_1:-28336519 | None:intergenic |
| TTAACTTCATCCAATATCTC+AGG | 0.505159 | 1_1:+28335350 | Msa0017090:CDS |
| AGACTATTGTCAAAATATAC+AGG | 0.505568 | 1_1:+28336667 | Msa0017090:CDS |
| TCTGATGACATTACTGCTAC+TGG | 0.509465 | 1_1:+28332536 | Msa0017090:CDS |
| TCATTCAATACAGATCCAAC+AGG | 0.510860 | 1_1:-28335463 | None:intergenic |
| TGCCACTTGTTGACAACTAT+GGG | 0.510885 | 1_1:+28334696 | Msa0017090:CDS |
| ATTATCAAAATAACAGCCTC+AGG | 0.511631 | 1_1:-28335673 | None:intergenic |
| AAGAGGCATGAAGCTGTTCA+AGG | 0.512411 | 1_1:+28337500 | Msa0017090:CDS |
| TTGTCACTGTCGTCAATGAA+AGG | 0.513515 | 1_1:-28336189 | None:intergenic |
| TTTCCTTGAGACAAAGGTCC+CGG | 0.513530 | 1_1:+28337538 | Msa0017090:CDS |
| AGTGGTTACATAGGAGAGAA+AGG | 0.513870 | 1_1:+28332665 | Msa0017090:CDS |
| GGATGAAGTTAAGCATCAAA+AGG | 0.515167 | 1_1:-28335339 | None:intergenic |
| AAGCAAAGAGATATTTCTGC+TGG | 0.515354 | 1_1:+28337172 | Msa0017090:CDS |
| ACTTGATACTGGAGCTTGAT+CGG | 0.515987 | 1_1:-28333799 | None:intergenic |
| GTCAAAGAGGCCAAATTTGA+GGG | 0.516129 | 1_1:-28335649 | None:intergenic |
| CTAAATTCCTCATCTTATGC+AGG | 0.516492 | 1_1:+28334836 | Msa0017090:CDS |
| GATTCGGAATCTGAAGCATA+GGG | 0.519631 | 1_1:+28335006 | Msa0017090:CDS |
| GGACAAAATCAAAGCAAAGT+TGG | 0.520170 | 1_1:+28333887 | Msa0017090:CDS |
| CCTTCAGATGTCTTTAGCCA+AGG | 0.520212 | 1_1:-28335430 | None:intergenic |
| AAATCAGGAGAGGCTTCATA+GGG | 0.521464 | 1_1:+28333584 | Msa0017090:CDS |
| CAGAAGCACTTCTATAAGCC+TGG | 0.523495 | 1_1:+28333948 | Msa0017090:CDS |
| ACAAATTCTGAGCATATGTT+GGG | 0.524080 | 1_1:-28338176 | None:intergenic |
| TTAACCTATCTTCTCATGAT+GGG | 0.525256 | 1_1:+28334042 | Msa0017090:CDS |
| GGTCAGAAAGTGTGGTTGAA+AGG | 0.525925 | 1_1:+28333520 | Msa0017090:CDS |
| AGTCCACCTTCAGTTCCATT+GGG | 0.526799 | 1_1:-28336849 | None:intergenic |
| TTGAAAATAAGTAATGTGGC+TGG | 0.527999 | 1_1:-28332563 | None:intergenic |
| TGAAGAATGGGTTGTGACAC+TGG | 0.528035 | 1_1:+28333554 | Msa0017090:CDS |
| TATGCTCTTCATATAAACTT+CGG | 0.528299 | 1_1:-28336374 | None:intergenic |
| TTCTTGAAGATATCTATGAT+AGG | 0.529049 | 1_1:+28336937 | Msa0017090:CDS |
| ATTATTGAAAATAAGTAATG+TGG | 0.531522 | 1_1:-28332567 | None:intergenic |
| AGAAGCAAAATATTGTTGAC+AGG | 0.532016 | 1_1:-28338062 | None:intergenic |
| AAGAGAACTGCAGAGGACAT+TGG | 0.533586 | 1_1:-28334570 | None:intergenic |
| TTGACCTTATCCTGCTTCAA+GGG | 0.535464 | 1_1:-28333237 | None:intergenic |
| GAACACATTCAAGTATCCCT+TGG | 0.535610 | 1_1:-28333734 | None:intergenic |
| AATGTATAAAAGATGGCAGC+TGG | 0.535839 | 1_1:+28335056 | Msa0017090:CDS |
| TCTTAATTCGCTCGCCATTG+GGG | 0.536132 | 1_1:+28335122 | Msa0017090:CDS |
| ATCAGGAGTGAAGAAGAGAA+TGG | 0.536791 | 1_1:-28331001 | None:intergenic |
| GGAAGCAAAAGTTTCCGGTC+AGG | 0.537304 | 1_1:+28333499 | Msa0017090:CDS |
| TGAGACAAAGGTCCCGGTCA+TGG | 0.538521 | 1_1:+28337544 | Msa0017090:CDS |
| ATCGAGTCCATATGCGGTGT+TGG | 0.538601 | 1_1:+28332614 | Msa0017090:CDS |
| TGCATTTCTTCCTACAGAGA+TGG | 0.539549 | 1_1:+28333629 | Msa0017090:CDS |
| CCTTTGTCTCAAGGAAACTC+AGG | 0.539809 | 1_1:-28337532 | None:intergenic |
| CTTTCTTTAATCCAACTGAT+GGG | 0.540609 | 1_1:+28336508 | Msa0017090:CDS |
| CATCCACGAGATTAGAACTC+TGG | 0.541207 | 1_1:-28334166 | None:intergenic |
| GAATCTTCCTTGCTGAATGA+TGG | 0.544376 | 1_1:+28337368 | Msa0017090:CDS |
| ATGATGAAATTTCAATGGGA+AGG | 0.545370 | 1_1:-28333842 | None:intergenic |
| AAGTTGTTAGGAGTGGTAGT+TGG | 0.545509 | 1_1:+28335580 | Msa0017090:CDS |
| ACCACACTTTCTGACCTGAC+CGG | 0.545588 | 1_1:-28333513 | None:intergenic |
| CCAAGACTGCAATGTGGACA+AGG | 0.545693 | 1_1:-28333114 | None:intergenic |
| GAATACTCAGTCAGAAGGGA+AGG | 0.545905 | 1_1:-28337885 | None:intergenic |
| GCATTTGGAGGAGATATATG+AGG | 0.545949 | 1_1:-28334923 | None:intergenic |
| ACGAGAGCTTCTATGGGGAT+AGG | 0.547113 | 1_1:+28335191 | Msa0017090:CDS |
| GCAAGTACACTCCTTCGTCT+CGG | 0.547540 | 1_1:-28334019 | None:intergenic |
| AATGAAGTATTTGTCAAAGC+GGG | 0.547848 | 1_1:+28334649 | Msa0017090:CDS |
| GTTTCACTCCCTCGTTGTAG+TGG | 0.549208 | 1_1:-28332490 | None:intergenic |
| GGATTCGGAATCTGAAGCAT+AGG | 0.549368 | 1_1:+28335005 | Msa0017090:CDS |
| AAGAAAATTTGGATTCCCAA+TGG | 0.549458 | 1_1:+28336834 | Msa0017090:CDS |
| AGCCCTGACTTCCATGGCAA+AGG | 0.550141 | 1_1:-28336979 | None:intergenic |
| TAGGATAAACGAGTATGAAG+AGG | 0.550160 | 1_1:+28335210 | Msa0017090:CDS |
| CGCCCATAGTTGTCAACAAG+TGG | 0.551293 | 1_1:-28334698 | None:intergenic |
| GGAGCTGAAGTTGTTAGGAG+TGG | 0.551332 | 1_1:+28335573 | Msa0017090:CDS |
| TGGATTCCCAATGGAACTGA+AGG | 0.553737 | 1_1:+28336843 | Msa0017090:CDS |
| CCTGAGTTTCCTTGAGACAA+AGG | 0.553792 | 1_1:+28337532 | Msa0017090:CDS |
| GATTTCCTCACAACTCATGT+TGG | 0.554142 | 1_1:+28334887 | Msa0017090:CDS |
| GTTATGACAAACTCCAGTGT+TGG | 0.555568 | 1_1:-28332512 | None:intergenic |
| TGATTGACGAGAGCTTCTAT+GGG | 0.555890 | 1_1:+28335185 | Msa0017090:CDS |
| TGTCACTGTCGTCAATGAAA+GGG | 0.556043 | 1_1:-28336188 | None:intergenic |
| GGGTTTAGCCCTGACTTCCA+TGG | 0.556273 | 1_1:-28336985 | None:intergenic |
| ATGCAGAATACTCAGTCAGA+AGG | 0.557418 | 1_1:-28337890 | None:intergenic |
| TTGAGAAGTTTAATCATGTG+AGG | 0.557570 | 1_1:+28333865 | Msa0017090:CDS |
| TATAGTTCCTGAATGGGTTG+AGG | 0.559108 | 1_1:+28333140 | Msa0017090:CDS |
| GCATTCATAAAGACTGAAAG+AGG | 0.559501 | 1_1:-28334315 | None:intergenic |
| ATATATCTCCTCCAAATGCT+GGG | 0.560375 | 1_1:+28334927 | Msa0017090:CDS |
| AAACACACTTTCAGGAGTAA+TGG | 0.560473 | 1_1:-28336334 | None:intergenic |
| GCAAGGAGCATCCTTTCTCT+AGG | 0.560523 | 1_1:-28336611 | None:intergenic |
| TGGATAATAAATGGAACCAA+GGG | 0.561153 | 1_1:+28333718 | Msa0017090:CDS |
| GCTGAAAACCCAGCATTTGG+AGG | 0.561529 | 1_1:-28334935 | None:intergenic |
| GTAATGGTGGAGGGATCTGA+AGG | 0.561652 | 1_1:-28336318 | None:intergenic |
| AGAGAGAATCTCAAGGTGAC+CGG | 0.561652 | 1_1:-28336637 | None:intergenic |
| CGTGTCACAGAAACAAGAAA+GGG | 0.562687 | 1_1:+28334719 | Msa0017090:CDS |
| ACGATTCTTACTTAAAGTGA+AGG | 0.563967 | 1_1:-28335314 | None:intergenic |
| ATAGAAGCTCTCGTCAATCA+GGG | 0.564495 | 1_1:-28335182 | None:intergenic |
| AATTGGTTGAAGACACATGC+TGG | 0.566666 | 1_1:+28336438 | Msa0017090:CDS |
| TGATCAATCTTACTTTGGTG+AGG | 0.568691 | 1_1:+28335531 | Msa0017090:CDS |
| TAGAAGCTCTCGTCAATCAG+GGG | 0.568777 | 1_1:-28335181 | None:intergenic |
| TGAGAAGTTTAATCATGTGA+GGG | 0.572028 | 1_1:+28333866 | Msa0017090:CDS |
| ACAAAATGGTACGCTGGCAA+AGG | 0.572118 | 1_1:+28337618 | Msa0017090:CDS |
| AAATCTGCTTGAATAATGAA+AGG | 0.572563 | 1_1:-28333663 | None:intergenic |
| GGAGATATAGATTTCCACTC+TGG | 0.573951 | 1_1:-28336153 | None:intergenic |
| GTTGGACGATCAACAAAGAA+AGG | 0.574748 | 1_1:+28332632 | Msa0017090:CDS |
| TTGGATAATAAATGGAACCA+AGG | 0.576105 | 1_1:+28333717 | Msa0017090:CDS |
| CGAAGGACAAAGTTCTCTAT+CGG | 0.576706 | 1_1:+28331087 | Msa0017090:CDS |
| ATTCCCAATGGAACTGAAGG+TGG | 0.578375 | 1_1:+28336846 | Msa0017090:CDS |
| GCGTGTCACAGAAACAAGAA+AGG | 0.578663 | 1_1:+28334718 | Msa0017090:CDS |
| AAAAGATGTTCATTTCCTGA+TGG | 0.578740 | 1_1:+28331179 | Msa0017090:CDS |
| AGGACAAAGTTCTCTATCGG+TGG | 0.579395 | 1_1:+28331090 | Msa0017090:CDS |
| AAAATCGTAAGTTCATTGAA+AGG | 0.579562 | 1_1:+28335727 | Msa0017090:CDS |
| TTTGGCCTCTTTGACACCTG+AGG | 0.580234 | 1_1:+28335657 | Msa0017090:CDS |
| TCCGGTCAGGTCAGAAAGTG+TGG | 0.580886 | 1_1:+28333512 | Msa0017090:CDS |
| TATTTCAGTGCATTTCCTTG+AGG | 0.581160 | 1_1:-28337677 | None:intergenic |
| CATCCAGAGTTCTAATCTCG+TGG | 0.581803 | 1_1:+28334163 | Msa0017090:CDS |
| GAAGGTCTTAGGTCTCCTGT+TGG | 0.582026 | 1_1:+28335448 | Msa0017090:CDS |
| AAATTAGTGACCATCTCTGT+AGG | 0.582428 | 1_1:-28333639 | None:intergenic |
| GTGATCAATTCAGAGAGGGC+AGG | 0.583832 | 1_1:-28337761 | None:intergenic |
| ATTAAAGAAAGAACTCCACT+TGG | 0.586157 | 1_1:-28336496 | None:intergenic |
| GCGAGATTAACTTCGTGCAA+AGG | 0.587053 | 1_1:+28333391 | Msa0017090:CDS |
| TATTGTTTCAGAGAAATATG+TGG | 0.588582 | 1_1:-28337702 | None:intergenic |
| GTCACCACTGACCTAGAGAA+AGG | 0.592850 | 1_1:+28336600 | Msa0017090:CDS |
| ATAGTCTATCGCTGTCATCA+GGG | 0.593893 | 1_1:+28337573 | Msa0017090:CDS |
| TTCTCTGAAACAATATCAGA+AGG | 0.595476 | 1_1:+28337710 | Msa0017090:CDS |
| AAGGAAGAACTGAAGAACCT+TGG | 0.597020 | 1_1:+28336240 | Msa0017090:CDS |
| AAGTGGCTGTATACCAAGGT+TGG | 0.597027 | 1_1:+28336093 | Msa0017090:CDS |
| TGGTGAAGATCCTCAGTCAA+AGG | 0.597480 | 1_1:-28331123 | None:intergenic |
| CTGTATTGAATGATTCCGGA+TGG | 0.597662 | 1_1:+28335473 | Msa0017090:CDS |
| CACACTTTCAGGAGTAATGG+TGG | 0.598081 | 1_1:-28336331 | None:intergenic |
| CTGAATTGAAACATGGCGTG+AGG | 0.598775 | 1_1:+28336271 | Msa0017090:CDS |
| GATACTTGAATGTGTTCCAT+CGG | 0.601004 | 1_1:+28333740 | Msa0017090:CDS |
| GGAAGAAATGCATAGACCCC+TGG | 0.601342 | 1_1:-28333618 | None:intergenic |
| TGGTTTGTGAGACTATGTTA+AGG | 0.602038 | 1_1:+28337996 | Msa0017090:three_prime_UTR |
| CCATTATACATAATCAGAAG+TGG | 0.602670 | 1_1:+28336076 | Msa0017090:CDS |
| AGCTGCTTGAAGACAAACAT+GGG | 0.603608 | 1_1:+28335754 | Msa0017090:CDS |
| TCATACAAGAAACATTCACT+TGG | 0.604805 | 1_1:-28335787 | None:intergenic |
| CCTTGGCTAAAGACATCTGA+AGG | 0.605729 | 1_1:+28335430 | Msa0017090:CDS |
| AAATTATGTTGAGCTTGGAA+AGG | 0.606215 | 1_1:+28334808 | Msa0017090:CDS |
| TAGACTTTATGATCAATCAC+AGG | 0.606678 | 1_1:-28335850 | None:intergenic |
| CAGAGTTCTAATCTCGTGGA+TGG | 0.607253 | 1_1:+28334167 | Msa0017090:CDS |
| CGGAGAGATTCTTAACGGCA+TGG | 0.607529 | 1_1:-28331143 | None:intergenic |
| TACGGCAATACATGAATACA+AGG | 0.607899 | 1_1:+28336221 | Msa0017090:CDS |
| GGACAAAGTTCTCTATCGGT+GGG | 0.608517 | 1_1:+28331091 | Msa0017090:CDS |
| TGACCGGGACCTTTGTCTCA+AGG | 0.609122 | 1_1:-28337541 | None:intergenic |
| AGCAGCCTACTAACTTCACC+AGG | 0.611524 | 1_1:-28333966 | None:intergenic |
| ATATCTGCTTTATGTCAACA+AGG | 0.613422 | 1_1:-28333173 | None:intergenic |
| TTGAAAGTTGCTGTTTGACA+GGG | 0.614495 | 1_1:-28333260 | None:intergenic |
| TTGAGTAAATCCCGAGACGA+AGG | 0.614697 | 1_1:+28334008 | Msa0017090:CDS |
| GACTATAGCTTACCATGACC+GGG | 0.614713 | 1_1:-28337556 | None:intergenic |
| GAAGTATTTGTCAAAGCGGG+AGG | 0.615263 | 1_1:+28334652 | Msa0017090:CDS |
| TAGTCTATCGCTGTCATCAG+GGG | 0.615866 | 1_1:+28337574 | Msa0017090:CDS |
| ACCTATCTTCTCATGATGGG+AGG | 0.616829 | 1_1:+28334045 | Msa0017090:CDS |
| AACAGCCTCAGGTGTCAAAG+AGG | 0.616956 | 1_1:-28335662 | None:intergenic |
| AAGAGTGTAGCTACTACATG+TGG | 0.617033 | 1_1:+28333478 | Msa0017090:CDS |
| ATTAAGAACGACTTTGAAGG+AGG | 0.617792 | 1_1:-28335106 | None:intergenic |
| TGCAGAATACTCAGTCAGAA+GGG | 0.617813 | 1_1:-28337889 | None:intergenic |
| CATAAAGTGCATGAGAACAA+AGG | 0.619217 | 1_1:-28338103 | None:intergenic |
| ATCAACATAATCATCAAGTG+AGG | 0.619346 | 1_1:-28337006 | None:intergenic |
| AAGAAAGGCAATAGGAGCAG+TGG | 0.621388 | 1_1:+28332647 | Msa0017090:CDS |
| AGATTGGCCCAGAAGCATGA+AGG | 0.622109 | 1_1:+28334476 | Msa0017090:CDS |
| AAGCCTCTCCTGATTTGGGA+AGG | 0.622854 | 1_1:-28333577 | None:intergenic |
| ATAAAGCAGATATATGGTGC+TGG | 0.623832 | 1_1:+28333183 | Msa0017090:CDS |
| AATACTTCATTGATAAAGAG+TGG | 0.624505 | 1_1:-28334637 | None:intergenic |
| AAGCTGCTTGAAGACAAACA+TGG | 0.624576 | 1_1:+28335753 | Msa0017090:CDS |
| GCACGCATAACAACCAACCT+TGG | 0.625094 | 1_1:-28336106 | None:intergenic |
| TTGGCTGATCAATTGGAACA+AGG | 0.625478 | 1_1:+28334394 | Msa0017090:CDS |
| TTCAACACCATCATTCAGCA+AGG | 0.628441 | 1_1:-28337375 | None:intergenic |
| AATGCATCCATAAAGGCCGA+TGG | 0.628693 | 1_1:-28333756 | None:intergenic |
| CAATGTGATCAATTCAGAGA+GGG | 0.630743 | 1_1:-28337765 | None:intergenic |
| CAGAAGTTGGATGAGCCTCA+AGG | 0.631503 | 1_1:+28337662 | Msa0017090:CDS |
| ACTTTCAGGAGTAATGGTGG+AGG | 0.632253 | 1_1:-28336328 | None:intergenic |
| GTTTCTTGTATGACCAGACG+TGG | 0.632264 | 1_1:+28335797 | Msa0017090:CDS |
| TTGTCTCCCTAGATGAAGCA+AGG | 0.633027 | 1_1:-28333689 | None:intergenic |
| GAATCCTAATCCTTTGACTG+AGG | 0.633214 | 1_1:+28331113 | Msa0017090:CDS |
| CACTGTCAGAGAGAATCTCA+AGG | 0.635671 | 1_1:-28336644 | None:intergenic |
| GAAGATAACCACTACAACGA+GGG | 0.636772 | 1_1:+28332482 | Msa0017090:CDS |
| ACAGCATCAGAGATGAACCT+TGG | 0.639183 | 1_1:+28335413 | Msa0017090:CDS |
| TCAACATAATCATCAAGTGA+GGG | 0.641694 | 1_1:-28337005 | None:intergenic |
| AAGATGACAAAATGGTACGC+TGG | 0.643248 | 1_1:+28337612 | Msa0017090:CDS |
| TCTTCAGGCTAGAACAAGCA+AGG | 0.644793 | 1_1:-28337466 | None:intergenic |
| GCATCCTTTCTCTAGGTCAG+TGG | 0.646549 | 1_1:-28336604 | None:intergenic |
| TTTCTTGTATGACCAGACGT+GGG | 0.646686 | 1_1:+28335798 | Msa0017090:CDS |
| CTTTCAGGAGTAATGGTGGA+GGG | 0.646779 | 1_1:-28336327 | None:intergenic |
| TGGCCTTCCCAAATCAGGAG+AGG | 0.648967 | 1_1:+28333574 | Msa0017090:CDS |
| AACACGTTGAAGAGATACGA+AGG | 0.650029 | 1_1:+28331070 | Msa0017090:CDS |
| TGAAGATGGAACCAGACAAG+AGG | 0.652120 | 1_1:+28337483 | Msa0017090:CDS |
| CAGAAGGGAAGGCAGAACTG+AGG | 0.652776 | 1_1:-28337874 | None:intergenic |
| CGAGGGAGTGAAACCAACAC+TGG | 0.653447 | 1_1:+28332499 | Msa0017090:CDS |
| TGATTCAATAATAATAACAA+AGG | 0.653591 | 1_1:-28338021 | None:intergenic |
| CAATGAAGTATTTGTCAAAG+CGG | 0.658221 | 1_1:+28334648 | Msa0017090:CDS |
| TATCTGCTTTATGTCAACAA+GGG | 0.658452 | 1_1:-28333172 | None:intergenic |
| CTTTATGATCAATCACAGGA+AGG | 0.659071 | 1_1:-28335846 | None:intergenic |
| GAAGGCCCAAAGTCCTGCTG+AGG | 0.659475 | 1_1:-28337272 | None:intergenic |
| CAGAGAAGAAACTTTCGGAG+AGG | 0.659611 | 1_1:+28337123 | Msa0017090:CDS |
| GTTTGCTGTTTAATTCCAAG+TGG | 0.662733 | 1_1:+28336481 | Msa0017090:CDS |
| ATAATGGTCGAACAATCAGA+AGG | 0.663332 | 1_1:-28336060 | None:intergenic |
| GGAAATATATAGCTACGAAG+AGG | 0.665720 | 1_1:+28335552 | Msa0017090:CDS |
| GCACTTTGCATACCAATCAA+CGG | 0.667243 | 1_1:-28334141 | None:intergenic |
| AACAGCAAACACATCTCTGG+AGG | 0.669999 | 1_1:-28336468 | None:intergenic |
| ATGGAACTGAAGGTGGACTG+TGG | 0.671611 | 1_1:+28336853 | Msa0017090:CDS |
| TCAATTCAGTAACAACACCA+AGG | 0.672552 | 1_1:-28336257 | None:intergenic |
| AAATTGGCCTGCATAAGATG+AGG | 0.673901 | 1_1:-28334843 | None:intergenic |
| AAGCTCCAACATGAGTTGTG+AGG | 0.674441 | 1_1:-28334892 | None:intergenic |
| TTCTTGTATGACCAGACGTG+GGG | 0.677245 | 1_1:+28335799 | Msa0017090:CDS |
| TGGAACTGAAGGTGGACTGT+GGG | 0.677646 | 1_1:+28336854 | Msa0017090:CDS |
| AGAAGCTCTCGTCAATCAGG+GGG | 0.679481 | 1_1:-28335180 | None:intergenic |
| GGGGAGTGCACTTACCAGAG+AGG | 0.679613 | 1_1:+28335026 | Msa0017090:CDS |
| TCAGAAGTGGCTGTATACCA+AGG | 0.681225 | 1_1:+28336089 | Msa0017090:CDS |
| GTGTCACAGAAACAAGAAAG+GGG | 0.681652 | 1_1:+28334720 | Msa0017090:CDS |
| TGGAGTGATGTCCAGTTGTG+AGG | 0.682265 | 1_1:+28335246 | Msa0017090:CDS |
| TGAATACAACTGGAAACCTG+AGG | 0.690265 | 1_1:+28336800 | Msa0017090:CDS |
| AATAACATCGAGTCCATATG+CGG | 0.692614 | 1_1:+28332608 | Msa0017090:CDS |
| TAGGGGTAAAAGCTCACCAG+GGG | 0.694911 | 1_1:+28333602 | Msa0017090:CDS |
| TATAACTTAGAAATGGACGA+AGG | 0.698447 | 1_1:-28337290 | None:intergenic |
| CACACTACATCTCTCCGCAG+AGG | 0.708853 | 1_1:+28333437 | Msa0017090:CDS |
| ATTCGGAATCTGAAGCATAG+GGG | 0.712605 | 1_1:+28335007 | Msa0017090:CDS |
| GTTGTTACTGAATTGAAACA+TGG | 0.714865 | 1_1:+28336264 | Msa0017090:CDS |
| ACTGAAGCAAATCGGTGTGG+TGG | 0.715774 | 1_1:+28335903 | Msa0017090:CDS |
| GATTGACGAGAGCTTCTATG+GGG | 0.718134 | 1_1:+28335186 | Msa0017090:CDS |
| CCAATGTGATCAATTCAGAG+AGG | 0.728208 | 1_1:-28337766 | None:intergenic |
| TGTCACAGAAACAAGAAAGG+GGG | 0.733648 | 1_1:+28334721 | Msa0017090:CDS |
| ATAGGGGTAAAAGCTCACCA+GGG | 0.740878 | 1_1:+28333601 | Msa0017090:CDS |
| ATATATCCAAGACTGCAATG+TGG | 0.750302 | 1_1:-28333120 | None:intergenic |
| AATCAGGAGAGGCTTCATAG+GGG | 0.751305 | 1_1:+28333585 | Msa0017090:CDS |
| TGAAGATAACCACTACAACG+AGG | 0.755604 | 1_1:+28332481 | Msa0017090:CDS |
| TGAACTGAAGCAAATCGGTG+TGG | 0.762633 | 1_1:+28335900 | Msa0017090:CDS |
| GTACGATGCATTCTTCAGAG+CGG | 0.790546 | 1_1:-28336878 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCTACTAATAAATAA+AGG | - | chr1_1:28331245-28331264 | None:intergenic | 10.0% |
| !! | ATTTCAGTTATTTATATATT+AGG | + | chr1_1:28332326-28332345 | Msa0017090:intron | 10.0% |
| !!! | ATTCAAATACAATTTTTTTA+CGG | - | chr1_1:28332418-28332437 | None:intergenic | 10.0% |
| !!! | TTAACCCTATTTATTTTATA+CGG | - | chr1_1:28331585-28331604 | None:intergenic | 15.0% |
| !!! | TCTAAACAATTTTTTTTACA+GGG | - | chr1_1:28331649-28331668 | None:intergenic | 15.0% |
| !!! | ATCTAAACAATTTTTTTTAC+AGG | - | chr1_1:28331650-28331669 | None:intergenic | 15.0% |
| !! | ACTTCAAATTACAAAATTTA+AGG | - | chr1_1:28331822-28331841 | None:intergenic | 15.0% |
| !!! | ATTTGAAGATTTTTTTGTTT+TGG | - | chr1_1:28331854-28331873 | None:intergenic | 15.0% |
| !! | AAAAAAATCTTCAAATTACA+AGG | + | chr1_1:28331858-28331877 | Msa0017090:intron | 15.0% |
| !!! | TTTTTCCAATAAAATTGATT+TGG | - | chr1_1:28332077-28332096 | None:intergenic | 15.0% |
| !!! | TTCAAATACAATTTTTTTAC+GGG | - | chr1_1:28332417-28332436 | None:intergenic | 15.0% |
| !! | ATTATTGAAAATAAGTAATG+TGG | - | chr1_1:28332570-28332589 | None:intergenic | 15.0% |
| !!! | ACTTATTTTCAATAATGAAA+AGG | + | chr1_1:28332574-28332593 | Msa0017090:CDS | 15.0% |
| !!! | CTTATTTTCAATAATGAAAA+GGG | + | chr1_1:28332575-28332594 | Msa0017090:CDS | 15.0% |
| !!! | TTTTTGAAATGTATAAAAGA+TGG | + | chr1_1:28335049-28335068 | Msa0017090:CDS | 15.0% |
| !! | TAAAAATTTGCATCAATAAA+AGG | - | chr1_1:28336534-28336553 | None:intergenic | 15.0% |
| !!! | TTTATTGATGCAAATTTTTA+TGG | + | chr1_1:28336534-28336553 | Msa0017090:CDS | 15.0% |
| !! | ATAATATTGTGAATATACAT+AGG | + | chr1_1:28336769-28336788 | Msa0017090:intron | 15.0% |
| !! | TGATTCAATAATAATAACAA+AGG | - | chr1_1:28338024-28338043 | None:intergenic | 15.0% |
| !! | TTATGCCGTATAAAATAAAT+AGG | + | chr1_1:28331577-28331596 | Msa0017090:intron | 20.0% |
| !! | TATGCCGTATAAAATAAATA+GGG | + | chr1_1:28331578-28331597 | Msa0017090:intron | 20.0% |
| !!! | CTAAACAATTTTTTTTACAG+GGG | - | chr1_1:28331648-28331667 | None:intergenic | 20.0% |
| !! | CCAAAAATCTTTAAATTACA+GGG | - | chr1_1:28331678-28331697 | None:intergenic | 20.0% |
| !! | ACCAAAAATCTTTAAATTAC+AGG | - | chr1_1:28331679-28331698 | None:intergenic | 20.0% |
| !! | TGAAATTCTCTCAAATTATA+GGG | + | chr1_1:28331786-28331805 | Msa0017090:intron | 20.0% |
| !!! | AATAAAATTGATTTGGACTT+CGG | - | chr1_1:28332070-28332089 | None:intergenic | 20.0% |
| !! | GTTATTTATATATTAGGTGT+TGG | + | chr1_1:28332332-28332351 | Msa0017090:intron | 20.0% |
| !!! | TCAAATACAATTTTTTTACG+GGG | - | chr1_1:28332416-28332435 | None:intergenic | 20.0% |
| !! | GTTGACAACAAAAAAAATTA+TGG | - | chr1_1:28332448-28332467 | None:intergenic | 20.0% |
| !! | TATCCATTGCTAAAAATATA+TGG | - | chr1_1:28333072-28333091 | None:intergenic | 20.0% |
| !! | TCAAATGATGAAATTTCAAT+GGG | - | chr1_1:28333849-28333868 | None:intergenic | 20.0% |
| !!! | ATAATGTACTCAACTTTTTA+GGG | + | chr1_1:28334105-28334124 | Msa0017090:CDS | 20.0% |
| !! | TATTCCATTGATAAAATATG+TGG | + | chr1_1:28334274-28334293 | Msa0017090:CDS | 20.0% |
| !! | AGTAAGATTGATCAATAAAA+GGG | - | chr1_1:28335525-28335544 | None:intergenic | 20.0% |
| !! | AAGTAAGATTGATCAATAAA+AGG | - | chr1_1:28335526-28335545 | None:intergenic | 20.0% |
| !! | TTTATTGATCAATCTTACTT+TGG | + | chr1_1:28335526-28335545 | Msa0017090:CDS | 20.0% |
| !!! | CATATAAAATGCATTGTTTT+GGG | - | chr1_1:28336131-28336150 | None:intergenic | 20.0% |
| !!! | GATATTCTTTTCAACTTAAA+AGG | + | chr1_1:28337419-28337438 | Msa0017090:CDS | 20.0% |
| !! | TTGTAATGAAATGAAGTATC+AGG | - | chr1_1:28331021-28331040 | None:intergenic | 25.0% |
| !!! | TTTTTGTCTTGTTTTTGTGT+AGG | + | chr1_1:28331319-28331338 | Msa0017090:intron | 25.0% |
| ! | ATGTAAAAGAAGAATAAGCA+TGG | - | chr1_1:28331365-28331384 | None:intergenic | 25.0% |
| !!! | TTCTTTACTCTTTTTTTGTG+TGG | + | chr1_1:28331395-28331414 | Msa0017090:intron | 25.0% |
| !!! | AATCCTATCATCTTTTTTAG+AGG | + | chr1_1:28331532-28331551 | Msa0017090:intron | 25.0% |
| !! | TATCCTCTAAAAAAGATGAT+AGG | - | chr1_1:28331538-28331557 | None:intergenic | 25.0% |
| !! | CCCTGTAATTTAAAGATTTT+TGG | + | chr1_1:28331675-28331694 | Msa0017090:intron | 25.0% |
| ! | TGCAAAATCGATAATATGAT+AGG | + | chr1_1:28331724-28331743 | Msa0017090:intron | 25.0% |
| ! | GCAAAATCGATAATATGATA+GGG | + | chr1_1:28331725-28331744 | Msa0017090:intron | 25.0% |
| ! | CAAAATCGATAATATGATAG+GGG | + | chr1_1:28331726-28331745 | Msa0017090:intron | 25.0% |
| ! | AAAATCGATAATATGATAGG+GGG | + | chr1_1:28331727-28331746 | Msa0017090:intron | 25.0% |
| ! | ATGTCATATCATGGATATTT+CGG | - | chr1_1:28331757-28331776 | None:intergenic | 25.0% |
| ! | AAATATCCATGATATGACAT+GGG | + | chr1_1:28331757-28331776 | Msa0017090:intron | 25.0% |
| ! | CTGAAATTCTCTCAAATTAT+AGG | + | chr1_1:28331785-28331804 | Msa0017090:intron | 25.0% |
| ! | GAAATTCTCTCAAATTATAG+GGG | + | chr1_1:28331787-28331806 | Msa0017090:intron | 25.0% |
| ! | AAATTCTCTCAAATTATAGG+GGG | + | chr1_1:28331788-28331807 | Msa0017090:intron | 25.0% |
| !! | GAAGTCCAAATCAATTTTAT+TGG | + | chr1_1:28332069-28332088 | Msa0017090:intron | 25.0% |
| !! | AAACACATTAGCAATTTTTG+AGG | - | chr1_1:28332127-28332146 | None:intergenic | 25.0% |
| ! | GTTTATCTTATAATAGAGAC+TGG | - | chr1_1:28332175-28332194 | None:intergenic | 25.0% |
| ! | TCTTAAAATGTTGTGTACTT+TGG | + | chr1_1:28332715-28332734 | Msa0017090:intron | 25.0% |
| ! | TTTATATCACTCGATTAACA+AGG | - | chr1_1:28332912-28332931 | None:intergenic | 25.0% |
| ! | TTGTGTTATCATCTTCAATT+TGG | - | chr1_1:28332975-28332994 | None:intergenic | 25.0% |
| !!! | CAACCATATATTTTTAGCAA+TGG | + | chr1_1:28333066-28333085 | Msa0017090:CDS | 25.0% |
| ! | TTAGCAATGGATATCAAATA+AGG | + | chr1_1:28333079-28333098 | Msa0017090:CDS | 25.0% |
| ! | AAATCTGCTTGAATAATGAA+AGG | - | chr1_1:28333666-28333685 | None:intergenic | 25.0% |
| ! | CAATTCTCTTGGATAATAAA+TGG | + | chr1_1:28333709-28333728 | Msa0017090:CDS | 25.0% |
| ! | CTCAAATGATGAAATTTCAA+TGG | - | chr1_1:28333850-28333869 | None:intergenic | 25.0% |
| !! | GATAATGTACTCAACTTTTT+AGG | + | chr1_1:28334104-28334123 | Msa0017090:CDS | 25.0% |
| !! | TAATGTACTCAACTTTTTAG+GGG | + | chr1_1:28334106-28334125 | Msa0017090:CDS | 25.0% |
| !! | TAATGTTTGTTGCTAAAAAC+TGG | + | chr1_1:28334219-28334238 | Msa0017090:CDS | 25.0% |
| ! | AATACTTCATTGATAAAGAG+TGG | - | chr1_1:28334640-28334659 | None:intergenic | 25.0% |
| ! | AATGAAAATTATGTTGAGCT+TGG | + | chr1_1:28334803-28334822 | Msa0017090:CDS | 25.0% |
| !! | TTAAGTGCTTGATAACAATT+TGG | - | chr1_1:28335621-28335640 | None:intergenic | 25.0% |
| ! | AAAAAAATCACCCTCAAATT+TGG | + | chr1_1:28335639-28335658 | Msa0017090:CDS | 25.0% |
| !! | ATGAACTTACGATTTTACTA+GGG | - | chr1_1:28335723-28335742 | None:intergenic | 25.0% |
| !! | AATGAACTTACGATTTTACT+AGG | - | chr1_1:28335724-28335743 | None:intergenic | 25.0% |
| ! | AAAATCGTAAGTTCATTGAA+AGG | + | chr1_1:28335727-28335746 | Msa0017090:CDS | 25.0% |
| ! | AAAAATGAACTGAAGCAAAT+CGG | + | chr1_1:28335895-28335914 | Msa0017090:CDS | 25.0% |
| !! | CCATATAAAATGCATTGTTT+TGG | - | chr1_1:28336132-28336151 | None:intergenic | 25.0% |
| !! | CCAAAACAATGCATTTTATA+TGG | + | chr1_1:28336129-28336148 | Msa0017090:CDS | 25.0% |
| ! | TATGCTCTTCATATAAACTT+CGG | - | chr1_1:28336377-28336396 | None:intergenic | 25.0% |
| !!! | TTCTGAAAAGATGCTATTTT+AGG | - | chr1_1:28336561-28336580 | None:intergenic | 25.0% |
| ! | AGACTATTGTCAAAATATAC+AGG | + | chr1_1:28336667-28336686 | Msa0017090:CDS | 25.0% |
| ! | TTAAACCAAAAAGCTTATCA+GGG | - | chr1_1:28336908-28336927 | None:intergenic | 25.0% |
| ! | TTTAAACCAAAAAGCTTATC+AGG | - | chr1_1:28336909-28336928 | None:intergenic | 25.0% |
| ! | TTCTTGAAGATATCTATGAT+AGG | + | chr1_1:28336937-28336956 | Msa0017090:CDS | 25.0% |
| !! | TTGATGATTATGTTGATCTT+TGG | + | chr1_1:28337012-28337031 | Msa0017090:CDS | 25.0% |
| ! | ATGTTTATCCTGAAACATTT+GGG | + | chr1_1:28337092-28337111 | Msa0017090:CDS | 25.0% |
| ! | AAATACAGAGAAGAAACTTT+CGG | + | chr1_1:28337118-28337137 | Msa0017090:CDS | 25.0% |
| ! | GATGTCATATAACTTAGAAA+TGG | - | chr1_1:28337300-28337319 | None:intergenic | 25.0% |
| ! | TATGACATCTACAGAAAAAT+CGG | + | chr1_1:28337311-28337330 | Msa0017090:CDS | 25.0% |
| ! | TACAAAGAAAGATGACAAAA+TGG | + | chr1_1:28337604-28337623 | Msa0017090:CDS | 25.0% |
| ! | TATTGTTTCAGAGAAATATG+TGG | - | chr1_1:28337705-28337724 | None:intergenic | 25.0% |
| ! | TGAAGATATTGAATTTCTGA+TGG | + | chr1_1:28337811-28337830 | Msa0017090:CDS | 25.0% |
| TTACAATTGCAGAAGATCAA+TGG | + | chr1_1:28331035-28331054 | Msa0017090:exon | 30.0% | |
| ! | AACATCTTTTGCATAAAGCT+CGG | - | chr1_1:28331169-28331188 | None:intergenic | 30.0% |
| AAAAGATGTTCATTTCCTGA+TGG | + | chr1_1:28331179-28331198 | Msa0017090:CDS | 30.0% | |
| TAAAGGAGATGAAACAGAAA+AGG | - | chr1_1:28331228-28331247 | None:intergenic | 30.0% | |
| ATACGGCATAATAAGATGAT+AGG | - | chr1_1:28331568-28331587 | None:intergenic | 30.0% | |
| GGAAATCGCTAATATTAAAG+GGG | - | chr1_1:28331619-28331638 | None:intergenic | 30.0% | |
| CGGAAATCGCTAATATTAAA+GGG | - | chr1_1:28331620-28331639 | None:intergenic | 30.0% | |
| CCTTTAATATTAGCGATTTC+CGG | + | chr1_1:28331618-28331637 | Msa0017090:intron | 30.0% | |
| !!! | TTTTTTTTACAGGGGTAAAC+CGG | - | chr1_1:28331640-28331659 | None:intergenic | 30.0% |
| GAAATATCCATGATATGACA+TGG | + | chr1_1:28331756-28331775 | Msa0017090:intron | 30.0% | |
| AATATCCATGATATGACATG+GGG | + | chr1_1:28331758-28331777 | Msa0017090:intron | 30.0% | |
| CAATTGTCTTAGTGTTTGTT+TGG | + | chr1_1:28331886-28331905 | Msa0017090:intron | 30.0% | |
| !!! | TTAGTGTTTGTTTGGTTTTG+TGG | + | chr1_1:28331894-28331913 | Msa0017090:intron | 30.0% |
| !! | TTTGTAGCTTTTGACTACAA+AGG | - | chr1_1:28332022-28332041 | None:intergenic | 30.0% |
| TTGAAAATAAGTAATGTGGC+TGG | - | chr1_1:28332566-28332585 | None:intergenic | 30.0% | |
| ! | ATAGTCAACTATCTCTCTTT+TGG | + | chr1_1:28332882-28332901 | Msa0017090:intron | 30.0% |
| TATAAAACCATGCTTGACTA+TGG | + | chr1_1:28332926-28332945 | Msa0017090:intron | 30.0% | |
| !!! | CTTCAATTTGGCTACTTTTA+TGG | - | chr1_1:28332963-28332982 | None:intergenic | 30.0% |
| GTTTGACATAATCTCTCTTA+TGG | + | chr1_1:28332997-28333016 | Msa0017090:intron | 30.0% | |
| TATGGTTGAATTTCAGGAAT+CGG | + | chr1_1:28333015-28333034 | Msa0017090:intron | 30.0% | |
| TTGGATATATAGTTCCTGAA+TGG | + | chr1_1:28333133-28333152 | Msa0017090:CDS | 30.0% | |
| TGGATATATAGTTCCTGAAT+GGG | + | chr1_1:28333134-28333153 | Msa0017090:CDS | 30.0% | |
| TATCTGCTTTATGTCAACAA+GGG | - | chr1_1:28333175-28333194 | None:intergenic | 30.0% | |
| ATATCTGCTTTATGTCAACA+AGG | - | chr1_1:28333176-28333195 | None:intergenic | 30.0% | |
| GTTGACATAAAGCAGATATA+TGG | + | chr1_1:28333177-28333196 | Msa0017090:CDS | 30.0% | |
| GTAAGAAACAAAAGAACTTC+TGG | - | chr1_1:28333294-28333313 | None:intergenic | 30.0% | |
| CATTAACTTCTCTTACAGAA+AGG | - | chr1_1:28333329-28333348 | None:intergenic | 30.0% | |
| AGAGAAGTTAATGAAAATGC+TGG | + | chr1_1:28333336-28333355 | Msa0017090:CDS | 30.0% | |
| TTGGATAATAAATGGAACCA+AGG | + | chr1_1:28333717-28333736 | Msa0017090:CDS | 30.0% | |
| TGGATAATAAATGGAACCAA+GGG | + | chr1_1:28333718-28333737 | Msa0017090:CDS | 30.0% | |
| !! | TGTTTTGAATGCATCCATAA+AGG | - | chr1_1:28333766-28333785 | None:intergenic | 30.0% |
| ATGATGAAATTTCAATGGGA+AGG | - | chr1_1:28333845-28333864 | None:intergenic | 30.0% | |
| TTGAGAAGTTTAATCATGTG+AGG | + | chr1_1:28333865-28333884 | Msa0017090:CDS | 30.0% | |
| TGAGAAGTTTAATCATGTGA+GGG | + | chr1_1:28333866-28333885 | Msa0017090:CDS | 30.0% | |
| TGTTCCTATTGAGACATATA+CGG | + | chr1_1:28333923-28333942 | Msa0017090:CDS | 30.0% | |
| TTAACCTATCTTCTCATGAT+GGG | + | chr1_1:28334042-28334061 | Msa0017090:CDS | 30.0% | |
| AAACTGGACTTCAAGATTTA+AGG | + | chr1_1:28334235-28334254 | Msa0017090:CDS | 30.0% | |
| AACTGGACTTCAAGATTTAA+GGG | + | chr1_1:28334236-28334255 | Msa0017090:CDS | 30.0% | |
| ! | GAAGCCACATATTTTATCAA+TGG | - | chr1_1:28334281-28334300 | None:intergenic | 30.0% |
| ATAAAATATGTGGCTTCTGA+TGG | + | chr1_1:28334284-28334303 | Msa0017090:CDS | 30.0% | |
| ! | AGAAAATGACGTTGATTGAA+TGG | + | chr1_1:28334501-28334520 | Msa0017090:CDS | 30.0% |
| !! | TATTTTTAAGAGAACTGCAG+AGG | - | chr1_1:28334580-28334599 | None:intergenic | 30.0% |
| CAAAAAATGAGCATATGCAA+TGG | - | chr1_1:28334615-28334634 | None:intergenic | 30.0% | |
| ! | CAATGAAGTATTTGTCAAAG+CGG | + | chr1_1:28334648-28334667 | Msa0017090:CDS | 30.0% |
| ! | AATGAAGTATTTGTCAAAGC+GGG | + | chr1_1:28334649-28334668 | Msa0017090:CDS | 30.0% |
| !! | ACTTGATTGTTTCTAATCCT+TGG | + | chr1_1:28334777-28334796 | Msa0017090:CDS | 30.0% |
| ! | ACATAATTTTCATTCCTCCA+AGG | - | chr1_1:28334797-28334816 | None:intergenic | 30.0% |
| AAATTATGTTGAGCTTGGAA+AGG | + | chr1_1:28334808-28334827 | Msa0017090:CDS | 30.0% | |
| !!! | AAGCAAAAAGGCATTGTTTT+TGG | - | chr1_1:28334978-28334997 | None:intergenic | 30.0% |
| ! | AAACAATGCCTTTTTGCTTT+TGG | + | chr1_1:28334979-28334998 | Msa0017090:CDS | 30.0% |
| AATCCAATCCAAAAGCAAAA+AGG | - | chr1_1:28334990-28335009 | None:intergenic | 30.0% | |
| !! | TTTTGCTTTTGGATTGGATT+CGG | + | chr1_1:28334990-28335009 | Msa0017090:CDS | 30.0% |
| ATACATTTCAAAAACCTCTC+TGG | - | chr1_1:28335043-28335062 | None:intergenic | 30.0% | |
| ! | GAAAATTTTGCAAAGTGGTT+CGG | + | chr1_1:28335144-28335163 | Msa0017090:CDS | 30.0% |
| ACGATTCTTACTTAAAGTGA+AGG | - | chr1_1:28335317-28335336 | None:intergenic | 30.0% | |
| TTAACTTCATCCAATATCTC+AGG | + | chr1_1:28335350-28335369 | Msa0017090:CDS | 30.0% | |
| ATTATCAAAATAACAGCCTC+AGG | - | chr1_1:28335676-28335695 | None:intergenic | 30.0% | |
| AATGCAATGCATCAAATTCT+TGG | + | chr1_1:28335693-28335712 | Msa0017090:CDS | 30.0% | |
| TCATACAAGAAACATTCACT+TGG | - | chr1_1:28335790-28335809 | None:intergenic | 30.0% | |
| ! | TGCATTTTGGATGTATTCAA+TGG | + | chr1_1:28335823-28335842 | Msa0017090:CDS | 30.0% |
| TAGACTTTATGATCAATCAC+AGG | - | chr1_1:28335853-28335872 | None:intergenic | 30.0% | |
| GTGATTGATCATAAAGTCTA+TGG | + | chr1_1:28335853-28335872 | Msa0017090:CDS | 30.0% | |
| ! | AGAAATGACATGACATTTTC+TGG | - | chr1_1:28336000-28336019 | None:intergenic | 30.0% |
| CCACTTCTGATTATGTATAA+TGG | - | chr1_1:28336079-28336098 | None:intergenic | 30.0% | |
| CCATTATACATAATCAGAAG+TGG | + | chr1_1:28336076-28336095 | Msa0017090:CDS | 30.0% | |
| ! | CAGTGACAAATTTTATGGTA+CGG | + | chr1_1:28336203-28336222 | Msa0017090:CDS | 30.0% |
| GTTGTTACTGAATTGAAACA+TGG | + | chr1_1:28336264-28336283 | Msa0017090:CDS | 30.0% | |
| GAAGGAAAATTCAGACATTT+AGG | - | chr1_1:28336303-28336322 | None:intergenic | 30.0% | |
| ATTAAAGAAAGAACTCCACT+TGG | - | chr1_1:28336499-28336518 | None:intergenic | 30.0% | |
| TCTTTCTTTAATCCAACTGA+TGG | + | chr1_1:28336507-28336526 | Msa0017090:CDS | 30.0% | |
| CTTTCTTTAATCCAACTGAT+GGG | + | chr1_1:28336508-28336527 | Msa0017090:CDS | 30.0% | |
| CAGAAAGAATTCAATGCAAT+CGG | + | chr1_1:28336576-28336595 | Msa0017090:CDS | 30.0% | |
| ATAAAGCTGCCAAGAAAATT+TGG | + | chr1_1:28336823-28336842 | Msa0017090:CDS | 30.0% | |
| ! | ATTGGGAATCCAAATTTTCT+TGG | - | chr1_1:28336835-28336854 | None:intergenic | 30.0% |
| AAGAAAATTTGGATTCCCAA+TGG | + | chr1_1:28336834-28336853 | Msa0017090:CDS | 30.0% | |
| TCAACATAATCATCAAGTGA+GGG | - | chr1_1:28337008-28337027 | None:intergenic | 30.0% | |
| ATCAACATAATCATCAAGTG+AGG | - | chr1_1:28337009-28337028 | None:intergenic | 30.0% | |
| !! | ATGTTGATCTTTGGAATGAA+TGG | + | chr1_1:28337021-28337040 | Msa0017090:CDS | 30.0% |
| !! | TGTTGATCTTTGGAATGAAT+GGG | + | chr1_1:28337022-28337041 | Msa0017090:CDS | 30.0% |
| GATGTTTATCCTGAAACATT+TGG | + | chr1_1:28337091-28337110 | Msa0017090:CDS | 30.0% | |
| TATAACTTAGAAATGGACGA+AGG | - | chr1_1:28337293-28337312 | None:intergenic | 30.0% | |
| GTTTGATTAAGCTCATTCTT+GGG | + | chr1_1:28337441-28337460 | Msa0017090:CDS | 30.0% | |
| !! | TTCTCTGAAACAATATCAGA+AGG | + | chr1_1:28337710-28337729 | Msa0017090:CDS | 30.0% |
| ! | TAACTTTGTTCTCTTTTCTG+TGG | + | chr1_1:28337976-28337995 | Msa0017090:three_prime_UTR | 30.0% |
| AGAAGCAAAATATTGTTGAC+AGG | - | chr1_1:28338065-28338084 | None:intergenic | 30.0% | |
| CTTCTTTCACTTCTATTTGA+TGG | + | chr1_1:28338080-28338099 | Msa0017090:three_prime_UTR | 30.0% | |
| ACAAATTCTGAGCATATGTT+GGG | - | chr1_1:28338179-28338198 | None:intergenic | 30.0% | |
| TACAAATTCTGAGCATATGT+TGG | - | chr1_1:28338180-28338199 | None:intergenic | 30.0% | |
| AGAGAATGGTTTACTTCTCT+TGG | - | chr1_1:28330990-28331009 | None:intergenic | 35.0% | |
| ! | ATCTCTTCAACGTGTTCTTT+TGG | - | chr1_1:28331066-28331085 | None:intergenic | 35.0% |
| GTACTTGAATTAGTTCCATC+AGG | - | chr1_1:28331197-28331216 | None:intergenic | 35.0% | |
| AAGAAGAATAAGCATGGTCT+TGG | - | chr1_1:28331359-28331378 | None:intergenic | 35.0% | |
| CCGGAAATCGCTAATATTAA+AGG | - | chr1_1:28331621-28331640 | None:intergenic | 35.0% | |
| ACTGAGTTTGACAACAAAAG+TGG | - | chr1_1:28332361-28332380 | None:intergenic | 35.0% | |
| CATATGGACTCGATGTTATT+TGG | - | chr1_1:28332608-28332627 | None:intergenic | 35.0% | |
| AATAACATCGAGTCCATATG+CGG | + | chr1_1:28332608-28332627 | Msa0017090:CDS | 35.0% | |
| GATCAACAAAGAAAGGCAAT+AGG | + | chr1_1:28332639-28332658 | Msa0017090:CDS | 35.0% | |
| CTCTCTTATGGTTGAATTTC+AGG | + | chr1_1:28333009-28333028 | Msa0017090:intron | 35.0% | |
| ATATATCCAAGACTGCAATG+TGG | - | chr1_1:28333123-28333142 | None:intergenic | 35.0% | |
| ATAAAGCAGATATATGGTGC+TGG | + | chr1_1:28333183-28333202 | Msa0017090:CDS | 35.0% | |
| !! | TTGAAAGTTGCTGTTTGACA+GGG | - | chr1_1:28333263-28333282 | None:intergenic | 35.0% |
| ! | AGCATTACTATTTTCCTCTG+CGG | - | chr1_1:28333454-28333473 | None:intergenic | 35.0% |
| GAGAACAGATGTTGAAGAAT+GGG | + | chr1_1:28333542-28333561 | Msa0017090:CDS | 35.0% | |
| AAATTAGTGACCATCTCTGT+AGG | - | chr1_1:28333642-28333661 | None:intergenic | 35.0% | |
| ! | ATTTTGTCCTTGCTTCATCT+AGG | + | chr1_1:28333682-28333701 | Msa0017090:CDS | 35.0% |
| ! | TTTTGTCCTTGCTTCATCTA+GGG | + | chr1_1:28333683-28333702 | Msa0017090:CDS | 35.0% |
| GATACTTGAATGTGTTCCAT+CGG | + | chr1_1:28333740-28333759 | Msa0017090:CDS | 35.0% | |
| !! | GCATTCAAAACACTTGTTGT+AGG | + | chr1_1:28333774-28333793 | Msa0017090:CDS | 35.0% |
| GGACAAAATCAAAGCAAAGT+TGG | + | chr1_1:28333887-28333906 | Msa0017090:CDS | 35.0% | |
| CTTAACCTATCTTCTCATGA+TGG | + | chr1_1:28334041-28334060 | Msa0017090:CDS | 35.0% | |
| TTAAACAAGTGACCGTTGAT+TGG | + | chr1_1:28334129-28334148 | Msa0017090:CDS | 35.0% | |
| GCATTCATAAAGACTGAAAG+AGG | - | chr1_1:28334318-28334337 | None:intergenic | 35.0% | |
| ! | AACAAGGAATTTTCATGTGC+AGG | + | chr1_1:28334410-28334429 | Msa0017090:CDS | 35.0% |
| ! | AATTTTCATGTGCAGGAAAC+CGG | + | chr1_1:28334417-28334436 | Msa0017090:CDS | 35.0% |
| ! | TGCTTTCTGGCATAAAAAAC+CGG | - | chr1_1:28334439-28334458 | None:intergenic | 35.0% |
| TCAAAAGGCTATCTTGAGAT+TGG | + | chr1_1:28334460-28334479 | Msa0017090:CDS | 35.0% | |
| !! | TGATTGTTTCTAATCCTTGG+AGG | + | chr1_1:28334780-28334799 | Msa0017090:CDS | 35.0% |
| CTGCATAAGATGAGGAATTT+AGG | - | chr1_1:28334838-28334857 | None:intergenic | 35.0% | |
| CTAAATTCCTCATCTTATGC+AGG | + | chr1_1:28334836-28334855 | Msa0017090:CDS | 35.0% | |
| GAGGAAATCAATAAGCTTTC+CGG | - | chr1_1:28334876-28334895 | None:intergenic | 35.0% | |
| ATATATCTCCTCCAAATGCT+GGG | + | chr1_1:28334927-28334946 | Msa0017090:CDS | 35.0% | |
| !!! | AAGGCATTGTTTTTGGTAAG+TGG | - | chr1_1:28334971-28334990 | None:intergenic | 35.0% |
| !! | ATGCCTTTTTGCTTTTGGAT+TGG | + | chr1_1:28334984-28335003 | Msa0017090:CDS | 35.0% |
| AATGTATAAAAGATGGCAGC+TGG | + | chr1_1:28335056-28335075 | Msa0017090:CDS | 35.0% | |
| TGGCTTAAAGTTACCGTTAA+TGG | + | chr1_1:28335076-28335095 | Msa0017090:CDS | 35.0% | |
| ! | ATTAAGAACGACTTTGAAGG+AGG | - | chr1_1:28335109-28335128 | None:intergenic | 35.0% |
| CGAATTAAGAACGACTTTGA+AGG | - | chr1_1:28335112-28335131 | None:intergenic | 35.0% | |
| ! | CTTTGCAAAATTTTCCCCAA+TGG | - | chr1_1:28335139-28335158 | None:intergenic | 35.0% |
| ! | TTGGGGAAAATTTTGCAAAG+TGG | + | chr1_1:28335139-28335158 | Msa0017090:CDS | 35.0% |
| TAGGATAAACGAGTATGAAG+AGG | + | chr1_1:28335210-28335229 | Msa0017090:CDS | 35.0% | |
| GAAGAGGAGTTGAAAACAAT+TGG | + | chr1_1:28335226-28335245 | Msa0017090:CDS | 35.0% | |
| ! | GAGGAAGCATGTAAATTCAT+TGG | + | chr1_1:28335265-28335284 | Msa0017090:CDS | 35.0% |
| GGATGAAGTTAAGCATCAAA+AGG | - | chr1_1:28335342-28335361 | None:intergenic | 35.0% | |
| TAAAGACATCTGAAGGTCTT+AGG | + | chr1_1:28335437-28335456 | Msa0017090:CDS | 35.0% | |
| TCATTCAATACAGATCCAAC+AGG | - | chr1_1:28335466-28335485 | None:intergenic | 35.0% | |
| GGATCTGTATTGAATGATTC+CGG | + | chr1_1:28335469-28335488 | Msa0017090:CDS | 35.0% | |
| TGATCAATCTTACTTTGGTG+AGG | + | chr1_1:28335531-28335550 | Msa0017090:CDS | 35.0% | |
| GGAAATATATAGCTACGAAG+AGG | + | chr1_1:28335552-28335571 | Msa0017090:CDS | 35.0% | |
| CTTTATGATCAATCACAGGA+AGG | - | chr1_1:28335849-28335868 | None:intergenic | 35.0% | |
| ! | TGTCATTTCTTTCTTGTTGC+AGG | + | chr1_1:28336010-28336029 | Msa0017090:CDS | 35.0% |
| ATAATGGTCGAACAATCAGA+AGG | - | chr1_1:28336063-28336082 | None:intergenic | 35.0% | |
| ATGAAAGGGAGACAAGTAAT+CGG | - | chr1_1:28336177-28336196 | None:intergenic | 35.0% | |
| ! | GACGACAGTGACAAATTTTA+TGG | + | chr1_1:28336198-28336217 | Msa0017090:CDS | 35.0% |
| TACGGCAATACATGAATACA+AGG | + | chr1_1:28336221-28336240 | Msa0017090:CDS | 35.0% | |
| TCAATTCAGTAACAACACCA+AGG | - | chr1_1:28336260-28336279 | None:intergenic | 35.0% | |
| AAACACACTTTCAGGAGTAA+TGG | - | chr1_1:28336337-28336356 | None:intergenic | 35.0% | |
| AGCAAAGAAAACACACTTTC+AGG | - | chr1_1:28336345-28336364 | None:intergenic | 35.0% | |
| !! | TGAAAGTGTGTTTTCTTTGC+TGG | + | chr1_1:28336344-28336363 | Msa0017090:CDS | 35.0% |
| CTTTCTGAACTCATCATCAA+TGG | - | chr1_1:28336406-28336425 | None:intergenic | 35.0% | |
| GAAAGAGATTGTCCAGAAAT+TGG | + | chr1_1:28336421-28336440 | Msa0017090:CDS | 35.0% | |
| ATGTGTCTTCAACCAATTTC+TGG | - | chr1_1:28336436-28336455 | None:intergenic | 35.0% | |
| TTAAACAGCAAACACATCTC+TGG | - | chr1_1:28336474-28336493 | None:intergenic | 35.0% | |
| !! | GTTTGCTGTTTAATTCCAAG+TGG | + | chr1_1:28336481-28336500 | Msa0017090:CDS | 35.0% |
| CAAAAAGAGACACAACATGT+GGG | - | chr1_1:28336708-28336727 | None:intergenic | 35.0% | |
| CAAAGTCAGAAAGAGAGTTA+AGG | - | chr1_1:28336749-28336768 | None:intergenic | 35.0% | |
| TCCATGGCAAAGGTAAAAAA+GGG | - | chr1_1:28336972-28336991 | None:intergenic | 35.0% | |
| TTCCATGGCAAAGGTAAAAA+AGG | - | chr1_1:28336973-28336992 | None:intergenic | 35.0% | |
| TATTTGTGCCCAAATGTTTC+AGG | - | chr1_1:28337103-28337122 | None:intergenic | 35.0% | |
| ! | AAGCAAAGAGATATTTCTGC+TGG | + | chr1_1:28337172-28337191 | Msa0017090:CDS | 35.0% |
| TTCTTCAGATGAAGGTTATC+AGG | - | chr1_1:28337218-28337237 | None:intergenic | 35.0% | |
| CAAAAAGCTTCTTCAGATGA+AGG | - | chr1_1:28337226-28337245 | None:intergenic | 35.0% | |
| GGTTTGATTAAGCTCATTCT+TGG | + | chr1_1:28337440-28337459 | Msa0017090:CDS | 35.0% | |
| CAACTTCTGGATGAAAAACT+TGG | - | chr1_1:28337651-28337670 | None:intergenic | 35.0% | |
| ! | CAAGTTTTTCATCCAGAAGT+TGG | + | chr1_1:28337649-28337668 | Msa0017090:CDS | 35.0% |
| TATTTCAGTGCATTTCCTTG+AGG | - | chr1_1:28337680-28337699 | None:intergenic | 35.0% | |
| CAATGTGATCAATTCAGAGA+GGG | - | chr1_1:28337768-28337787 | None:intergenic | 35.0% | |
| CTCTCTGAATTGATCACATT+GGG | + | chr1_1:28337767-28337786 | Msa0017090:CDS | 35.0% | |
| ! | GAACTTTCAGATTTTCAGTG+AGG | + | chr1_1:28337841-28337860 | Msa0017090:CDS | 35.0% |
| ! | TGGTTTGTGAGACTATGTTA+AGG | + | chr1_1:28337996-28338015 | Msa0017090:three_prime_UTR | 35.0% |
| CATAAAGTGCATGAGAACAA+AGG | - | chr1_1:28338106-28338125 | None:intergenic | 35.0% | |
| CTTTGTTCTCATGCACTTTA+TGG | + | chr1_1:28338104-28338123 | Msa0017090:three_prime_UTR | 35.0% | |
| ATCAGGAGTGAAGAAGAGAA+TGG | - | chr1_1:28331004-28331023 | None:intergenic | 40.0% | |
| AACACGTTGAAGAGATACGA+AGG | + | chr1_1:28331070-28331089 | Msa0017090:CDS | 40.0% | |
| CGAAGGACAAAGTTCTCTAT+CGG | + | chr1_1:28331087-28331106 | Msa0017090:CDS | 40.0% | |
| GAATCCTAATCCTTTGACTG+AGG | + | chr1_1:28331113-28331132 | Msa0017090:CDS | 40.0% | |
| AGATCCTCAGTCAAAGGATT+AGG | - | chr1_1:28331120-28331139 | None:intergenic | 40.0% | |
| ! | ATCTTTTGCATAAAGCTCGG+CGG | - | chr1_1:28331166-28331185 | None:intergenic | 40.0% |
| GTTTACCCCATGTCATATCA+TGG | - | chr1_1:28331766-28331785 | None:intergenic | 40.0% | |
| TGAAGATAACCACTACAACG+AGG | + | chr1_1:28332481-28332500 | Msa0017090:CDS | 40.0% | |
| GAAGATAACCACTACAACGA+GGG | + | chr1_1:28332482-28332501 | Msa0017090:CDS | 40.0% | |
| GTTATGACAAACTCCAGTGT+TGG | - | chr1_1:28332515-28332534 | None:intergenic | 40.0% | |
| TCTGATGACATTACTGCTAC+TGG | + | chr1_1:28332536-28332555 | Msa0017090:CDS | 40.0% | |
| GTTGGACGATCAACAAAGAA+AGG | + | chr1_1:28332632-28332651 | Msa0017090:CDS | 40.0% | |
| AATAGGAGCAGTGGTTACAT+AGG | + | chr1_1:28332656-28332675 | Msa0017090:CDS | 40.0% | |
| AGTGGTTACATAGGAGAGAA+AGG | + | chr1_1:28332665-28332684 | Msa0017090:CDS | 40.0% | |
| TGTGTACTTTGGACTCAAGA+TGG | + | chr1_1:28332726-28332745 | Msa0017090:intron | 40.0% | |
| TCATACTCCATAGTCAAGCA+TGG | - | chr1_1:28332936-28332955 | None:intergenic | 40.0% | |
| !! | TATAGTTCCTGAATGGGTTG+AGG | + | chr1_1:28333140-28333159 | Msa0017090:CDS | 40.0% |
| TGCTTTATGTCAACAAGGGT+TGG | - | chr1_1:28333171-28333190 | None:intergenic | 40.0% | |
| GGCAAGACAATTGTTGTAGT+TGG | - | chr1_1:28333219-28333238 | None:intergenic | 40.0% | |
| TTGACCTTATCCTGCTTCAA+GGG | - | chr1_1:28333240-28333259 | None:intergenic | 40.0% | |
| !! | CTTGAAAGTTGCTGTTTGAC+AGG | - | chr1_1:28333264-28333283 | None:intergenic | 40.0% |
| ! | AAGAGTGTAGCTACTACATG+TGG | + | chr1_1:28333478-28333497 | Msa0017090:CDS | 40.0% |
| CATGTGGAAGCAAAAGTTTC+CGG | + | chr1_1:28333494-28333513 | Msa0017090:CDS | 40.0% | |
| GGAGAACAGATGTTGAAGAA+TGG | + | chr1_1:28333541-28333560 | Msa0017090:CDS | 40.0% | |
| TATGAAGCCTCTCCTGATTT+GGG | - | chr1_1:28333584-28333603 | None:intergenic | 40.0% | |
| AAATCAGGAGAGGCTTCATA+GGG | + | chr1_1:28333584-28333603 | Msa0017090:CDS | 40.0% | |
| TGCATTTCTTCCTACAGAGA+TGG | + | chr1_1:28333629-28333648 | Msa0017090:CDS | 40.0% | |
| ATCTAGGGAGACAATTCTCT+TGG | + | chr1_1:28333698-28333717 | Msa0017090:CDS | 40.0% | |
| GAACACATTCAAGTATCCCT+TGG | - | chr1_1:28333737-28333756 | None:intergenic | 40.0% | |
| ACTTGATACTGGAGCTTGAT+CGG | - | chr1_1:28333802-28333821 | None:intergenic | 40.0% | |
| TCAAGCTCCAGTATCAAGTT+TGG | + | chr1_1:28333803-28333822 | Msa0017090:CDS | 40.0% | |
| ATACGAGCCAAACTTGATAC+TGG | - | chr1_1:28333813-28333832 | None:intergenic | 40.0% | |
| TGCTCCGTATATGTCTCAAT+AGG | - | chr1_1:28333930-28333949 | None:intergenic | 40.0% | |
| ATAAGCCTGGTGAAGTTAGT+AGG | + | chr1_1:28333961-28333980 | Msa0017090:CDS | 40.0% | |
| GCACTTTGCATACCAATCAA+CGG | - | chr1_1:28334144-28334163 | None:intergenic | 40.0% | |
| CTTGTTCTTGGCTGATCAAT+TGG | + | chr1_1:28334387-28334406 | Msa0017090:CDS | 40.0% | |
| TTGGCTGATCAATTGGAACA+AGG | + | chr1_1:28334394-28334413 | Msa0017090:CDS | 40.0% | |
| !! | TATGCCAGAAAGCACTCAAA+AGG | + | chr1_1:28334445-28334464 | Msa0017090:CDS | 40.0% |
| !! | ATAGCCTTTTGAGTGCTTTC+TGG | - | chr1_1:28334452-28334471 | None:intergenic | 40.0% |
| TTTCTCACCTTCATGCTTCT+GGG | - | chr1_1:28334486-28334505 | None:intergenic | 40.0% | |
| ! | TTTTCTCACCTTCATGCTTC+TGG | - | chr1_1:28334487-28334506 | None:intergenic | 40.0% |
| ! | ATGCCACTTGTTGACAACTA+TGG | + | chr1_1:28334695-28334714 | Msa0017090:CDS | 40.0% |
| ! | TGCCACTTGTTGACAACTAT+GGG | + | chr1_1:28334696-28334715 | Msa0017090:CDS | 40.0% |
| CGTGTCACAGAAACAAGAAA+GGG | + | chr1_1:28334719-28334738 | Msa0017090:CDS | 40.0% | |
| GTGTCACAGAAACAAGAAAG+GGG | + | chr1_1:28334720-28334739 | Msa0017090:CDS | 40.0% | |
| TGTCACAGAAACAAGAAAGG+GGG | + | chr1_1:28334721-28334740 | Msa0017090:CDS | 40.0% | |
| TGCCTGCAAATGTTAGCAAA+TGG | + | chr1_1:28334750-28334769 | Msa0017090:CDS | 40.0% | |
| GCCTGCAAATGTTAGCAAAT+GGG | + | chr1_1:28334751-28334770 | Msa0017090:CDS | 40.0% | |
| ! | AAATTGGCCTGCATAAGATG+AGG | - | chr1_1:28334846-28334865 | None:intergenic | 40.0% |
| TCTTATGCAGGCCAATTTAC+AGG | + | chr1_1:28334848-28334867 | Msa0017090:CDS | 40.0% | |
| GATTTCCTCACAACTCATGT+TGG | + | chr1_1:28334887-28334906 | Msa0017090:CDS | 40.0% | |
| GCATTTGGAGGAGATATATG+AGG | - | chr1_1:28334926-28334945 | None:intergenic | 40.0% | |
| CATATATCTCCTCCAAATGC+TGG | + | chr1_1:28334926-28334945 | Msa0017090:CDS | 40.0% | |
| ! | GATTCGGAATCTGAAGCATA+GGG | + | chr1_1:28335006-28335025 | Msa0017090:CDS | 40.0% |
| ! | ATTCGGAATCTGAAGCATAG+GGG | + | chr1_1:28335007-28335026 | Msa0017090:CDS | 40.0% |
| AGGAGGACTGTATCCATTAA+CGG | - | chr1_1:28335092-28335111 | None:intergenic | 40.0% | |
| TTCTTAATTCGCTCGCCATT+GGG | + | chr1_1:28335121-28335140 | Msa0017090:CDS | 40.0% | |
| ATAGAAGCTCTCGTCAATCA+GGG | - | chr1_1:28335185-28335204 | None:intergenic | 40.0% | |
| TGATTGACGAGAGCTTCTAT+GGG | + | chr1_1:28335185-28335204 | Msa0017090:CDS | 40.0% | |
| TTTACATGCTTCCTCACAAC+TGG | - | chr1_1:28335260-28335279 | None:intergenic | 40.0% | |
| GATGACTTCTCCTGAGATAT+TGG | - | chr1_1:28335363-28335382 | None:intergenic | 40.0% | |
| TCATCTCCTATTGGACGAAT+TGG | + | chr1_1:28335378-28335397 | Msa0017090:CDS | 40.0% | |
| ATTCGTCCAATTCGTCCAAT+AGG | - | chr1_1:28335387-28335406 | None:intergenic | 40.0% | |
| CTGTATTGAATGATTCCGGA+TGG | + | chr1_1:28335473-28335492 | Msa0017090:CDS | 40.0% | |
| !! | TTGTGATGCTACTTTCCATC+CGG | - | chr1_1:28335491-28335510 | None:intergenic | 40.0% |
| AAGTTGTTAGGAGTGGTAGT+TGG | + | chr1_1:28335580-28335599 | Msa0017090:CDS | 40.0% | |
| GTCAAAGAGGCCAAATTTGA+GGG | - | chr1_1:28335652-28335671 | None:intergenic | 40.0% | |
| TGTCAAAGAGGCCAAATTTG+AGG | - | chr1_1:28335653-28335672 | None:intergenic | 40.0% | |
| AAGCTGCTTGAAGACAAACA+TGG | + | chr1_1:28335753-28335772 | Msa0017090:CDS | 40.0% | |
| AGCTGCTTGAAGACAAACAT+GGG | + | chr1_1:28335754-28335773 | Msa0017090:CDS | 40.0% | |
| TTTCTTGTATGACCAGACGT+GGG | + | chr1_1:28335798-28335817 | Msa0017090:CDS | 40.0% | |
| ! | GCATTTTATATGGTCCAGAG+TGG | + | chr1_1:28336139-28336158 | Msa0017090:CDS | 40.0% |
| GGAGATATAGATTTCCACTC+TGG | - | chr1_1:28336156-28336175 | None:intergenic | 40.0% | |
| TGTCACTGTCGTCAATGAAA+GGG | - | chr1_1:28336191-28336210 | None:intergenic | 40.0% | |
| TTGTCACTGTCGTCAATGAA+AGG | - | chr1_1:28336192-28336211 | None:intergenic | 40.0% | |
| AAGGAAGAACTGAAGAACCT+TGG | + | chr1_1:28336240-28336259 | Msa0017090:CDS | 40.0% | |
| AATTGGTTGAAGACACATGC+TGG | + | chr1_1:28336438-28336457 | Msa0017090:CDS | 40.0% | |
| ! | TGAAGACACATGCTGGTTAT+AGG | + | chr1_1:28336445-28336464 | Msa0017090:CDS | 40.0% |
| TCAATAAAAGGCCCATCAGT+TGG | - | chr1_1:28336522-28336541 | None:intergenic | 40.0% | |
| GCAAAAAGAGACACAACATG+TGG | - | chr1_1:28336709-28336728 | None:intergenic | 40.0% | |
| AGAAAGAGAGTTAAGGTGAC+TGG | - | chr1_1:28336742-28336761 | None:intergenic | 40.0% | |
| GGTACTTGTCTGAATACAAC+TGG | + | chr1_1:28336790-28336809 | Msa0017090:intron | 40.0% | |
| TGAATACAACTGGAAACCTG+AGG | + | chr1_1:28336800-28336819 | Msa0017090:CDS | 40.0% | |
| ! | CATGACCCTGATAAGCTTTT+TGG | + | chr1_1:28336900-28336919 | Msa0017090:CDS | 40.0% |
| !!! | TCCCTTTTTTACCTTTGCCA+TGG | + | chr1_1:28336968-28336987 | Msa0017090:CDS | 40.0% |
| GAATGAATGGGAGAGTTCAT+TGG | + | chr1_1:28337034-28337053 | Msa0017090:CDS | 40.0% | |
| !! | ATGACAAGTGCTGGAAATTC+TGG | + | chr1_1:28337069-28337088 | Msa0017090:CDS | 40.0% |
| AGCAAACTACCTGTAACAAC+AGG | + | chr1_1:28337149-28337168 | Msa0017090:CDS | 40.0% | |
| TCTTTGCTTCCTGTTGTTAC+AGG | - | chr1_1:28337161-28337180 | None:intergenic | 40.0% | |
| !! | TCTGAAGAAGCTTTTTGAGC+AGG | + | chr1_1:28337229-28337248 | Msa0017090:CDS | 40.0% |
| ! | AGCAGGAGAAGATTTTTGTG+TGG | + | chr1_1:28337246-28337265 | Msa0017090:CDS | 40.0% |
| GAATCTTCCTTGCTGAATGA+TGG | + | chr1_1:28337368-28337387 | Msa0017090:CDS | 40.0% | |
| TTCAACACCATCATTCAGCA+AGG | - | chr1_1:28337378-28337397 | None:intergenic | 40.0% | |
| ! | GCTGAATGATGGTGTTGAAA+TGG | + | chr1_1:28337379-28337398 | Msa0017090:CDS | 40.0% |
| AGACTATAGCTTACCATGAC+CGG | - | chr1_1:28337560-28337579 | None:intergenic | 40.0% | |
| TATAGTCTATCGCTGTCATC+AGG | + | chr1_1:28337572-28337591 | Msa0017090:CDS | 40.0% | |
| ATAGTCTATCGCTGTCATCA+GGG | + | chr1_1:28337573-28337592 | Msa0017090:CDS | 40.0% | |
| AAGATGACAAAATGGTACGC+TGG | + | chr1_1:28337612-28337631 | Msa0017090:CDS | 40.0% | |
| CCAATGTGATCAATTCAGAG+AGG | - | chr1_1:28337769-28337788 | None:intergenic | 40.0% | |
| CCTCTCTGAATTGATCACAT+TGG | + | chr1_1:28337766-28337785 | Msa0017090:CDS | 40.0% | |
| ! | TCAGATTTTCAGTGAGGATG+AGG | + | chr1_1:28337847-28337866 | Msa0017090:CDS | 40.0% |
| TGCAGAATACTCAGTCAGAA+GGG | - | chr1_1:28337892-28337911 | None:intergenic | 40.0% | |
| ATGCAGAATACTCAGTCAGA+AGG | - | chr1_1:28337893-28337912 | None:intergenic | 40.0% | |
| AGGACAAAGTTCTCTATCGG+TGG | + | chr1_1:28331090-28331109 | Msa0017090:CDS | 45.0% | |
| GGACAAAGTTCTCTATCGGT+GGG | + | chr1_1:28331091-28331110 | Msa0017090:CDS | 45.0% | |
| TGGTGAAGATCCTCAGTCAA+AGG | - | chr1_1:28331126-28331145 | None:intergenic | 45.0% | |
| AAGAAAGGCAATAGGAGCAG+TGG | + | chr1_1:28332647-28332666 | Msa0017090:CDS | 45.0% | |
| ! | CGGATTCAAGAGTGTGTTTC+TGG | + | chr1_1:28333035-28333054 | Msa0017090:CDS | 45.0% |
| AATTGTCTTGCCCTTGAAGC+AGG | + | chr1_1:28333227-28333246 | Msa0017090:CDS | 45.0% | |
| GTTGACCTTATCCTGCTTCA+AGG | - | chr1_1:28333241-28333260 | None:intergenic | 45.0% | |
| GCGAGATTAACTTCGTGCAA+AGG | + | chr1_1:28333391-28333410 | Msa0017090:CDS | 45.0% | |
| ! | GGTCAGAAAGTGTGGTTGAA+AGG | + | chr1_1:28333520-28333539 | Msa0017090:CDS | 45.0% |
| !! | TGAAGAATGGGTTGTGACAC+TGG | + | chr1_1:28333554-28333573 | Msa0017090:CDS | 45.0% |
| CTATGAAGCCTCTCCTGATT+TGG | - | chr1_1:28333585-28333604 | None:intergenic | 45.0% | |
| CAAATCAGGAGAGGCTTCAT+AGG | + | chr1_1:28333583-28333602 | Msa0017090:CDS | 45.0% | |
| AATCAGGAGAGGCTTCATAG+GGG | + | chr1_1:28333585-28333604 | Msa0017090:CDS | 45.0% | |
| ATAGGGGTAAAAGCTCACCA+GGG | + | chr1_1:28333601-28333620 | Msa0017090:CDS | 45.0% | |
| TTGTCTCCCTAGATGAAGCA+AGG | - | chr1_1:28333692-28333711 | None:intergenic | 45.0% | |
| ATGTGTTCCATCGGCCTTTA+TGG | + | chr1_1:28333749-28333768 | Msa0017090:CDS | 45.0% | |
| AATGCATCCATAAAGGCCGA+TGG | - | chr1_1:28333759-28333778 | None:intergenic | 45.0% | |
| !! | CAGAAGCACTTCTATAAGCC+TGG | + | chr1_1:28333948-28333967 | Msa0017090:CDS | 45.0% |
| TTGAGTAAATCCCGAGACGA+AGG | + | chr1_1:28334008-28334027 | Msa0017090:CDS | 45.0% | |
| ! | ACCTATCTTCTCATGATGGG+AGG | + | chr1_1:28334045-28334064 | Msa0017090:CDS | 45.0% |
| TCCTCCCATCATGAGAAGAT+AGG | - | chr1_1:28334049-28334068 | None:intergenic | 45.0% | |
| ! | CATCCAGAGTTCTAATCTCG+TGG | + | chr1_1:28334163-28334182 | Msa0017090:CDS | 45.0% |
| CATCCACGAGATTAGAACTC+TGG | - | chr1_1:28334169-28334188 | None:intergenic | 45.0% | |
| ! | CAGAGTTCTAATCTCGTGGA+TGG | + | chr1_1:28334167-28334186 | Msa0017090:CDS | 45.0% |
| GTCAGTCTGATGCTTGTTCT+TGG | + | chr1_1:28334375-28334394 | Msa0017090:CDS | 45.0% | |
| AAGAGAACTGCAGAGGACAT+TGG | - | chr1_1:28334573-28334592 | None:intergenic | 45.0% | |
| ! | GAAGTATTTGTCAAAGCGGG+AGG | + | chr1_1:28334652-28334671 | Msa0017090:CDS | 45.0% |
| GCGTGTCACAGAAACAAGAA+AGG | + | chr1_1:28334718-28334737 | Msa0017090:CDS | 45.0% | |
| ! | GCCCATTTGCTAACATTTGC+AGG | - | chr1_1:28334755-28334774 | None:intergenic | 45.0% |
| GCTTTCCGGAACCTGTAAAT+TGG | - | chr1_1:28334862-28334881 | None:intergenic | 45.0% | |
| AAGCTCCAACATGAGTTGTG+AGG | - | chr1_1:28334895-28334914 | None:intergenic | 45.0% | |
| ACAGCTGAAAACCCAGCATT+TGG | - | chr1_1:28334941-28334960 | None:intergenic | 45.0% | |
| ! | GGATTCGGAATCTGAAGCAT+AGG | + | chr1_1:28335005-28335024 | Msa0017090:CDS | 45.0% |
| GTTCTTAATTCGCTCGCCAT+TGG | + | chr1_1:28335120-28335139 | Msa0017090:CDS | 45.0% | |
| TCTTAATTCGCTCGCCATTG+GGG | + | chr1_1:28335122-28335141 | Msa0017090:CDS | 45.0% | |
| TAGAAGCTCTCGTCAATCAG+GGG | - | chr1_1:28335184-28335203 | None:intergenic | 45.0% | |
| CATAGAAGCTCTCGTCAATC+AGG | - | chr1_1:28335186-28335205 | None:intergenic | 45.0% | |
| CTGATTGACGAGAGCTTCTA+TGG | + | chr1_1:28335184-28335203 | Msa0017090:CDS | 45.0% | |
| GATTGACGAGAGCTTCTATG+GGG | + | chr1_1:28335186-28335205 | Msa0017090:CDS | 45.0% | |
| CAGGAGAAGTCATCTCCTAT+TGG | + | chr1_1:28335369-28335388 | Msa0017090:CDS | 45.0% | |
| ACAGCATCAGAGATGAACCT+TGG | + | chr1_1:28335413-28335432 | Msa0017090:CDS | 45.0% | |
| CCTTCAGATGTCTTTAGCCA+AGG | - | chr1_1:28335433-28335452 | None:intergenic | 45.0% | |
| CCTTGGCTAAAGACATCTGA+AGG | + | chr1_1:28335430-28335449 | Msa0017090:CDS | 45.0% | |
| GAAGAGGAGCTGAAGTTGTT+AGG | + | chr1_1:28335568-28335587 | Msa0017090:CDS | 45.0% | |
| GTTTCTTGTATGACCAGACG+TGG | + | chr1_1:28335797-28335816 | Msa0017090:CDS | 45.0% | |
| TTCTTGTATGACCAGACGTG+GGG | + | chr1_1:28335799-28335818 | Msa0017090:CDS | 45.0% | |
| TGAACTGAAGCAAATCGGTG+TGG | + | chr1_1:28335900-28335919 | Msa0017090:CDS | 45.0% | |
| TCAGAAGTGGCTGTATACCA+AGG | + | chr1_1:28336089-28336108 | Msa0017090:CDS | 45.0% | |
| AAGTGGCTGTATACCAAGGT+TGG | + | chr1_1:28336093-28336112 | Msa0017090:CDS | 45.0% | |
| CTGAATTGAAACATGGCGTG+AGG | + | chr1_1:28336271-28336290 | Msa0017090:CDS | 45.0% | |
| ! | CTTTCAGGAGTAATGGTGGA+GGG | - | chr1_1:28336330-28336349 | None:intergenic | 45.0% |
| ACTTTCAGGAGTAATGGTGG+AGG | - | chr1_1:28336331-28336350 | None:intergenic | 45.0% | |
| CACACTTTCAGGAGTAATGG+TGG | - | chr1_1:28336334-28336353 | None:intergenic | 45.0% | |
| AACAGCAAACACATCTCTGG+AGG | - | chr1_1:28336471-28336490 | None:intergenic | 45.0% | |
| AGAGAGAATCTCAAGGTGAC+CGG | - | chr1_1:28336640-28336659 | None:intergenic | 45.0% | |
| CACTGTCAGAGAGAATCTCA+AGG | - | chr1_1:28336647-28336666 | None:intergenic | 45.0% | |
| ! | TTCTTGGCAGCTTTATCCTC+AGG | - | chr1_1:28336819-28336838 | None:intergenic | 45.0% |
| TGGATTCCCAATGGAACTGA+AGG | + | chr1_1:28336843-28336862 | Msa0017090:CDS | 45.0% | |
| ATTCCCAATGGAACTGAAGG+TGG | + | chr1_1:28336846-28336865 | Msa0017090:CDS | 45.0% | |
| AGTCCACCTTCAGTTCCATT+GGG | - | chr1_1:28336852-28336871 | None:intergenic | 45.0% | |
| GTACGATGCATTCTTCAGAG+CGG | - | chr1_1:28336881-28336900 | None:intergenic | 45.0% | |
| TTACCTTTGCCATGGAAGTC+AGG | + | chr1_1:28336976-28336995 | Msa0017090:CDS | 45.0% | |
| TACCTTTGCCATGGAAGTCA+GGG | + | chr1_1:28336977-28336996 | Msa0017090:CDS | 45.0% | |
| AATTGTCGCATGACAAGTGC+TGG | + | chr1_1:28337060-28337079 | Msa0017090:CDS | 45.0% | |
| CAGAGAAGAAACTTTCGGAG+AGG | + | chr1_1:28337123-28337142 | Msa0017090:CDS | 45.0% | |
| ! | TTTTGTGTGGTATCCTCAGC+AGG | + | chr1_1:28337259-28337278 | Msa0017090:CDS | 45.0% |
| TCTTCAGGCTAGAACAAGCA+AGG | - | chr1_1:28337469-28337488 | None:intergenic | 45.0% | |
| TGCTTGTTCTAGCCTGAAGA+TGG | + | chr1_1:28337469-28337488 | Msa0017090:CDS | 45.0% | |
| ! | TCTTGTCTGGTTCCATCTTC+AGG | - | chr1_1:28337484-28337503 | None:intergenic | 45.0% |
| TGAAGATGGAACCAGACAAG+AGG | + | chr1_1:28337483-28337502 | Msa0017090:CDS | 45.0% | |
| ! | AAGAGGCATGAAGCTGTTCA+AGG | + | chr1_1:28337500-28337519 | Msa0017090:CDS | 45.0% |
| CCTTTGTCTCAAGGAAACTC+AGG | - | chr1_1:28337535-28337554 | None:intergenic | 45.0% | |
| CCTGAGTTTCCTTGAGACAA+AGG | + | chr1_1:28337532-28337551 | Msa0017090:CDS | 45.0% | |
| TTTCCTTGAGACAAAGGTCC+CGG | + | chr1_1:28337538-28337557 | Msa0017090:CDS | 45.0% | |
| GACTATAGCTTACCATGACC+GGG | - | chr1_1:28337559-28337578 | None:intergenic | 45.0% | |
| TAGTCTATCGCTGTCATCAG+GGG | + | chr1_1:28337574-28337593 | Msa0017090:CDS | 45.0% | |
| ACAAAATGGTACGCTGGCAA+AGG | + | chr1_1:28337618-28337637 | Msa0017090:CDS | 45.0% | |
| GAATACTCAGTCAGAAGGGA+AGG | - | chr1_1:28337888-28337907 | None:intergenic | 45.0% | |
| !!! | AAGAAAAAATATTTATTTTT+AGG | - | chr1_1:28332278-28332297 | None:intergenic | 5.0% |
| !!! | TATTTTAATCTTTTTTTAAA+AGG | + | chr1_1:28332831-28332850 | Msa0017090:intron | 5.0% |
| CGGAGAGATTCTTAACGGCA+TGG | - | chr1_1:28331146-28331165 | None:intergenic | 50.0% | |
| CTCGGCGGAGAGATTCTTAA+CGG | - | chr1_1:28331151-28331170 | None:intergenic | 50.0% | |
| GTTTCACTCCCTCGTTGTAG+TGG | - | chr1_1:28332493-28332512 | None:intergenic | 50.0% | |
| ATCGAGTCCATATGCGGTGT+TGG | + | chr1_1:28332614-28332633 | Msa0017090:CDS | 50.0% | |
| TGATCGTCCAACACCGCATA+TGG | - | chr1_1:28332624-28332643 | None:intergenic | 50.0% | |
| CCAAGACTGCAATGTGGACA+AGG | - | chr1_1:28333117-28333136 | None:intergenic | 50.0% | |
| CCTTGTCCACATTGCAGTCT+TGG | + | chr1_1:28333114-28333133 | Msa0017090:CDS | 50.0% | |
| CTTGCCCTTGAAGCAGGATA+AGG | + | chr1_1:28333233-28333252 | Msa0017090:CDS | 50.0% | |
| GGAAGCAAAAGTTTCCGGTC+AGG | + | chr1_1:28333499-28333518 | Msa0017090:CDS | 50.0% | |
| ACCACACTTTCTGACCTGAC+CGG | - | chr1_1:28333516-28333535 | None:intergenic | 50.0% | |
| !! | AAGCCTCTCCTGATTTGGGA+AGG | - | chr1_1:28333580-28333599 | None:intergenic | 50.0% |
| CATAGGGGTAAAAGCTCACC+AGG | + | chr1_1:28333600-28333619 | Msa0017090:CDS | 50.0% | |
| TAGGGGTAAAAGCTCACCAG+GGG | + | chr1_1:28333602-28333621 | Msa0017090:CDS | 50.0% | |
| GGAAGAAATGCATAGACCCC+TGG | - | chr1_1:28333621-28333640 | None:intergenic | 50.0% | |
| AGCAGCCTACTAACTTCACC+AGG | - | chr1_1:28333969-28333988 | None:intergenic | 50.0% | |
| GTAGGCTGCTGTCTGAATTC+TGG | + | chr1_1:28333979-28333998 | Msa0017090:CDS | 50.0% | |
| CAAGTACACTCCTTCGTCTC+GGG | - | chr1_1:28334021-28334040 | None:intergenic | 50.0% | |
| GCAAGTACACTCCTTCGTCT+CGG | - | chr1_1:28334022-28334041 | None:intergenic | 50.0% | |
| ! | AGATTGGCCCAGAAGCATGA+AGG | + | chr1_1:28334476-28334495 | Msa0017090:CDS | 50.0% |
| CGCCCATAGTTGTCAACAAG+TGG | - | chr1_1:28334701-28334720 | None:intergenic | 50.0% | |
| GCAGGCCAATTTACAGGTTC+CGG | + | chr1_1:28334854-28334873 | Msa0017090:CDS | 50.0% | |
| GCTGAAAACCCAGCATTTGG+AGG | - | chr1_1:28334938-28334957 | None:intergenic | 50.0% | |
| AGAAGCTCTCGTCAATCAGG+GGG | - | chr1_1:28335183-28335202 | None:intergenic | 50.0% | |
| ACGAGAGCTTCTATGGGGAT+AGG | + | chr1_1:28335191-28335210 | Msa0017090:CDS | 50.0% | |
| TGGAGTGATGTCCAGTTGTG+AGG | + | chr1_1:28335246-28335265 | Msa0017090:CDS | 50.0% | |
| GAAGGTCTTAGGTCTCCTGT+TGG | + | chr1_1:28335448-28335467 | Msa0017090:CDS | 50.0% | |
| GGAGCTGAAGTTGTTAGGAG+TGG | + | chr1_1:28335573-28335592 | Msa0017090:CDS | 50.0% | |
| TTTGGCCTCTTTGACACCTG+AGG | + | chr1_1:28335657-28335676 | Msa0017090:CDS | 50.0% | |
| AACAGCCTCAGGTGTCAAAG+AGG | - | chr1_1:28335665-28335684 | None:intergenic | 50.0% | |
| ACTGAAGCAAATCGGTGTGG+TGG | + | chr1_1:28335903-28335922 | Msa0017090:CDS | 50.0% | |
| TTCTTGTTGCAGGCTGCTGA+AGG | + | chr1_1:28336020-28336039 | Msa0017090:CDS | 50.0% | |
| TCTTGTTGCAGGCTGCTGAA+GGG | + | chr1_1:28336021-28336040 | Msa0017090:CDS | 50.0% | |
| GCACGCATAACAACCAACCT+TGG | - | chr1_1:28336109-28336128 | None:intergenic | 50.0% | |
| ! | GTAATGGTGGAGGGATCTGA+AGG | - | chr1_1:28336321-28336340 | None:intergenic | 50.0% |
| GTCACCACTGACCTAGAGAA+AGG | + | chr1_1:28336600-28336619 | Msa0017090:CDS | 50.0% | |
| GCATCCTTTCTCTAGGTCAG+TGG | - | chr1_1:28336607-28336626 | None:intergenic | 50.0% | |
| !! | GCAAGGAGCATCCTTTCTCT+AGG | - | chr1_1:28336614-28336633 | None:intergenic | 50.0% |
| AAAGGATGCTCCTTGCTTGC+CGG | + | chr1_1:28336618-28336637 | Msa0017090:CDS | 50.0% | |
| CAGTCCACCTTCAGTTCCAT+TGG | - | chr1_1:28336853-28336872 | None:intergenic | 50.0% | |
| !! | ATGGAACTGAAGGTGGACTG+TGG | + | chr1_1:28336853-28336872 | Msa0017090:CDS | 50.0% |
| !! | TGGAACTGAAGGTGGACTGT+GGG | + | chr1_1:28336854-28336873 | Msa0017090:CDS | 50.0% |
| TGGTATCCTCAGCAGGACTT+TGG | + | chr1_1:28337266-28337285 | Msa0017090:CDS | 50.0% | |
| GGTATCCTCAGCAGGACTTT+GGG | + | chr1_1:28337267-28337286 | Msa0017090:CDS | 50.0% | |
| ACAGCTTCATGCCTCTTGTC+TGG | - | chr1_1:28337497-28337516 | None:intergenic | 50.0% | |
| CTTGAGGCTCATCCAACTTC+TGG | - | chr1_1:28337664-28337683 | None:intergenic | 50.0% | |
| CAGAAGTTGGATGAGCCTCA+AGG | + | chr1_1:28337662-28337681 | Msa0017090:CDS | 50.0% | |
| GTGATCAATTCAGAGAGGGC+AGG | - | chr1_1:28337764-28337783 | None:intergenic | 50.0% | |
| CGAGGGAGTGAAACCAACAC+TGG | + | chr1_1:28332499-28332518 | Msa0017090:CDS | 55.0% | |
| GGCTTCTCCTCAACCCATTC+AGG | - | chr1_1:28333150-28333169 | None:intergenic | 55.0% | |
| CACACTACATCTCTCCGCAG+AGG | + | chr1_1:28333437-28333456 | Msa0017090:CDS | 55.0% | |
| TCCGGTCAGGTCAGAAAGTG+TGG | + | chr1_1:28333512-28333531 | Msa0017090:CDS | 55.0% | |
| !! | GACACTGGCCTTCCCAAATC+AGG | + | chr1_1:28333569-28333588 | Msa0017090:CDS | 55.0% |
| TGGCCTTCCCAAATCAGGAG+AGG | + | chr1_1:28333574-28333593 | Msa0017090:CDS | 55.0% | |
| CTTGTTGCAGGCTGCTGAAG+GGG | + | chr1_1:28336022-28336041 | Msa0017090:CDS | 55.0% | |
| AGCCCTGACTTCCATGGCAA+AGG | - | chr1_1:28336982-28337001 | None:intergenic | 55.0% | |
| GGGTTTAGCCCTGACTTCCA+TGG | - | chr1_1:28336988-28337007 | None:intergenic | 55.0% | |
| TGACCGGGACCTTTGTCTCA+AGG | - | chr1_1:28337544-28337563 | None:intergenic | 55.0% | |
| TGAGACAAAGGTCCCGGTCA+TGG | + | chr1_1:28337544-28337563 | Msa0017090:CDS | 55.0% | |
| CAGAAGGGAAGGCAGAACTG+AGG | - | chr1_1:28337877-28337896 | None:intergenic | 55.0% | |
| ! | GGGGAGTGCACTTACCAGAG+AGG | + | chr1_1:28335026-28335045 | Msa0017090:CDS | 60.0% |
| CCAAAATGCAGCCCCACGTC+TGG | - | chr1_1:28335813-28335832 | None:intergenic | 60.0% | |
| ! | CCAGACGTGGGGCTGCATTT+TGG | + | chr1_1:28335810-28335829 | Msa0017090:CDS | 60.0% |
| CTCAAGGTGACCGGCAAGCA+AGG | - | chr1_1:28336631-28336650 | None:intergenic | 60.0% | |
| GAAGGCCCAAAGTCCTGCTG+AGG | - | chr1_1:28337275-28337294 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 28330962 | 28338238 | 28330962 | ID=Msa0017090;Name=Msa0017090 |
| chr1_1 | mRNA | 28330962 | 28338238 | 28330962 | ID=Msa0017090-mRNA-1;Parent=Msa0017090;Name=Msa0017090-mRNA-1;_AED=0.01;_eAED=0.01;_QI=92|1|1|1|1|1|4|337|1712 |
| chr1_1 | exon | 28330962 | 28331212 | 28330962 | ID=Msa0017090-mRNA-1:exon:9464;Parent=Msa0017090-mRNA-1 |
| chr1_1 | exon | 28332476 | 28332686 | 28332476 | ID=Msa0017090-mRNA-1:exon:9465;Parent=Msa0017090-mRNA-1 |
| chr1_1 | exon | 28333031 | 28336688 | 28333031 | ID=Msa0017090-mRNA-1:exon:9466;Parent=Msa0017090-mRNA-1 |
| chr1_1 | exon | 28336791 | 28338238 | 28336791 | ID=Msa0017090-mRNA-1:exon:9467;Parent=Msa0017090-mRNA-1 |
| chr1_1 | five_prime_UTR | 28330962 | 28331053 | 28330962 | ID=Msa0017090-mRNA-1:five_prime_utr;Parent=Msa0017090-mRNA-1 |
| chr1_1 | CDS | 28331054 | 28331212 | 28331054 | ID=Msa0017090-mRNA-1:cds;Parent=Msa0017090-mRNA-1 |
| chr1_1 | CDS | 28332476 | 28332686 | 28332476 | ID=Msa0017090-mRNA-1:cds;Parent=Msa0017090-mRNA-1 |
| chr1_1 | CDS | 28333031 | 28336688 | 28333031 | ID=Msa0017090-mRNA-1:cds;Parent=Msa0017090-mRNA-1 |
| chr1_1 | CDS | 28336791 | 28337901 | 28336791 | ID=Msa0017090-mRNA-1:cds;Parent=Msa0017090-mRNA-1 |
| chr1_1 | three_prime_UTR | 28337902 | 28338238 | 28337902 | ID=Msa0017090-mRNA-1:three_prime_utr;Parent=Msa0017090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
