Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477390 | XP_003603580.1 | 89.109 | 303 | 24 | 4 | 1 | 302 | 1 | 295 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477390 | sp|Q6H500|RSBZ4_ORYSJ | 55.828 | 163 | 69 | 2 | 58 | 218 | 53 | 214 | 6.61e-48 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477390 | G7J2W2 | 89.109 | 303 | 24 | 4 | 1 | 302 | 1 | 295 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0477390 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0477390 | -0.820068 | 8.338509e-53 | -8.615850e-47 |
| Msa0005910 | Msa0477390 | 0.844809 | 6.005821e-59 | -8.615850e-47 |
| Msa0017090 | Msa0477390 | 0.801813 | 7.543556e-49 | -8.615850e-47 |
| Msa0021400 | Msa0477390 | 0.802826 | 4.666152e-49 | -8.615850e-47 |
| Msa0024320 | Msa0477390 | -0.800287 | 1.546898e-48 | -8.615850e-47 |
| Msa0027020 | Msa0477390 | -0.808831 | 2.552638e-50 | -8.615850e-47 |
| Msa0029700 | Msa0477390 | 0.841112 | 5.790459e-58 | -8.615850e-47 |
| Msa0032700 | Msa0477390 | -0.822074 | 2.877938e-53 | -8.615850e-47 |
| Msa0033970 | Msa0477390 | 0.860894 | 1.502362e-63 | -8.615850e-47 |
| Msa0045530 | Msa0477390 | -0.801974 | 6.990873e-49 | -8.615850e-47 |
| Msa0046020 | Msa0477390 | -0.803782 | 2.957909e-49 | -8.615850e-47 |
| Msa0050310 | Msa0477390 | -0.806556 | 7.765796e-50 | -8.615850e-47 |
| Msa0053550 | Msa0477390 | 0.857293 | 1.801401e-62 | -8.615850e-47 |
| Msa0069150 | Msa0477390 | -0.818427 | 1.970907e-52 | -8.615850e-47 |
| Msa0077990 | Msa0477390 | -0.800015 | 1.756889e-48 | -8.615850e-47 |
| Msa0079100 | Msa0477390 | -0.804051 | 2.600006e-49 | -8.615850e-47 |
| Msa0080020 | Msa0477390 | 0.832859 | 7.432069e-56 | -8.615850e-47 |
| Msa0081920 | Msa0477390 | 0.857042 | 2.136947e-62 | -8.615850e-47 |
| Msa0085470 | Msa0477390 | -0.823367 | 1.438695e-53 | -8.615850e-47 |
| Msa0087550 | Msa0477390 | 0.803835 | 2.883928e-49 | -8.615850e-47 |
| Msa0093360 | Msa0477390 | -0.801849 | 7.414405e-49 | -8.615850e-47 |
| Msa0095890 | Msa0477390 | -0.804560 | 2.037645e-49 | -8.615850e-47 |
| Msa0099160 | Msa0477390 | 0.801865 | 7.359970e-49 | -8.615850e-47 |
| Msa0110680 | Msa0477390 | 0.800977 | 1.118766e-48 | -8.615850e-47 |
| Msa0122170 | Msa0477390 | -0.804033 | 2.623634e-49 | -8.615850e-47 |
| Msa0122930 | Msa0477390 | -0.815900 | 7.292126e-52 | -8.615850e-47 |
| Msa0124960 | Msa0477390 | 0.828491 | 8.731184e-55 | -8.615850e-47 |
| Msa0127350 | Msa0477390 | -0.802898 | 4.509313e-49 | -8.615850e-47 |
| Msa0128030 | Msa0477390 | 0.850733 | 1.403315e-60 | -8.615850e-47 |
| Msa0134270 | Msa0477390 | 0.815739 | 7.920543e-52 | -8.615850e-47 |
| Msa0154730 | Msa0477390 | 0.824667 | 7.129782e-54 | -8.615850e-47 |
| Msa0156990 | Msa0477390 | 0.801079 | 1.066319e-48 | -8.615850e-47 |
| Msa0163400 | Msa0477390 | -0.802971 | 4.355162e-49 | -8.615850e-47 |
| Msa0167160 | Msa0477390 | -0.808959 | 2.396849e-50 | -8.615850e-47 |
| Msa0168950 | Msa0477390 | -0.802839 | 4.636128e-49 | -8.615850e-47 |
| Msa0185540 | Msa0477390 | -0.806400 | 8.378487e-50 | -8.615850e-47 |
| Msa0198280 | Msa0477390 | -0.800048 | 1.729967e-48 | -8.615850e-47 |
| Msa0207250 | Msa0477390 | -0.823536 | 1.314002e-53 | -8.615850e-47 |
| Msa0225080 | Msa0477390 | -0.809419 | 1.909798e-50 | -8.615850e-47 |
| Msa0225280 | Msa0477390 | -0.815724 | 7.983326e-52 | -8.615850e-47 |
| Msa0371010 | Msa0477390 | -0.833884 | 4.125883e-56 | -8.615850e-47 |
| Msa0372570 | Msa0477390 | -0.809168 | 2.162063e-50 | -8.615850e-47 |
| Msa0377990 | Msa0477390 | -0.805239 | 1.469262e-49 | -8.615850e-47 |
| Msa0378530 | Msa0477390 | -0.807089 | 5.992239e-50 | -8.615850e-47 |
| Msa0380470 | Msa0477390 | -0.817237 | 3.659167e-52 | -8.615850e-47 |
| Msa0382020 | Msa0477390 | -0.839457 | 1.566706e-57 | -8.615850e-47 |
| Msa0383110 | Msa0477390 | -0.800109 | 1.681201e-48 | -8.615850e-47 |
| Msa0383460 | Msa0477390 | 0.960497 | 1.265117e-118 | -8.615850e-47 |
| Msa0384140 | Msa0477390 | -0.820757 | 5.794730e-53 | -8.615850e-47 |
| Msa0419150 | Msa0477390 | -0.824324 | 8.587168e-54 | -8.615850e-47 |
| Msa0422230 | Msa0477390 | -0.813703 | 2.238464e-51 | -8.615850e-47 |
| Msa0427230 | Msa0477390 | -0.818391 | 2.008822e-52 | -8.615850e-47 |
| Msa0427600 | Msa0477390 | -0.811832 | 5.746629e-51 | -8.615850e-47 |
| Msa0428300 | Msa0477390 | -0.807075 | 6.032837e-50 | -8.615850e-47 |
| Msa0428720 | Msa0477390 | -0.825047 | 5.798118e-54 | -8.615850e-47 |
| Msa0428740 | Msa0477390 | -0.811684 | 6.188824e-51 | -8.615850e-47 |
| Msa0429000 | Msa0477390 | -0.821337 | 4.260525e-53 | -8.615850e-47 |
| Msa0429990 | Msa0477390 | -0.803034 | 4.225294e-49 | -8.615850e-47 |
| Msa0431270 | Msa0477390 | -0.824310 | 8.648859e-54 | -8.615850e-47 |
| Msa0431550 | Msa0477390 | -0.812596 | 3.915000e-51 | -8.615850e-47 |
| Msa0433090 | Msa0477390 | 0.800301 | 1.536725e-48 | -8.615850e-47 |
| Msa0434140 | Msa0477390 | 0.813363 | 2.658280e-51 | -8.615850e-47 |
| Msa0434830 | Msa0477390 | -0.835669 | 1.466346e-56 | -8.615850e-47 |
| Msa0436660 | Msa0477390 | -0.806198 | 9.240918e-50 | -8.615850e-47 |
| Msa0437820 | Msa0477390 | -0.802184 | 6.327207e-49 | -8.615850e-47 |
| Msa0449500 | Msa0477390 | 0.812582 | 3.942407e-51 | -8.615850e-47 |
| Msa0450920 | Msa0477390 | -0.807136 | 5.855853e-50 | -8.615850e-47 |
| Msa0464980 | Msa0477390 | -0.825846 | 3.750882e-54 | -8.615850e-47 |
| Msa0473740 | Msa0477390 | -0.819080 | 1.401332e-52 | -8.615850e-47 |
| Msa0474290 | Msa0477390 | -0.841868 | 3.659343e-58 | -8.615850e-47 |
| Msa0475080 | Msa0477390 | -0.808972 | 2.381221e-50 | -8.615850e-47 |
| Msa0476560 | Msa0477390 | -0.816643 | 4.975560e-52 | -8.615850e-47 |
| Msa0477390 | Msa0492330 | -0.841179 | 5.559108e-58 | -8.615850e-47 |
| Msa0477390 | Msa0497680 | 0.830104 | 3.543775e-55 | -8.615850e-47 |
| Msa0477390 | Msa0498250 | -0.808847 | 2.532925e-50 | -8.615850e-47 |
| Msa0477390 | Msa0500580 | -0.822822 | 1.928237e-53 | -8.615850e-47 |
| Msa0477390 | Msa0506700 | -0.800354 | 1.498911e-48 | -8.615850e-47 |
| Msa0477390 | Msa0506740 | -0.803453 | 3.461841e-49 | -8.615850e-47 |
| Msa0477390 | Msa0512950 | -0.800420 | 1.453578e-48 | -8.615850e-47 |
| Msa0477390 | Msa0518150 | -0.815085 | 1.107491e-51 | -8.615850e-47 |
| Msa0477390 | Msa0518720 | -0.843373 | 1.458603e-58 | -8.615850e-47 |
| Msa0477390 | Msa0519070 | -0.810999 | 8.718971e-51 | -8.615850e-47 |
| Msa0477390 | Msa0520480 | -0.808501 | 3.002420e-50 | -8.615850e-47 |
| Msa0477390 | Msa0520550 | -0.831525 | 1.588716e-55 | -8.615850e-47 |
| Msa0477390 | Msa0522820 | -0.804505 | 2.091964e-49 | -8.615850e-47 |
| Msa0477390 | Msa0524570 | -0.801569 | 8.464039e-49 | -8.615850e-47 |
| Msa0477390 | Msa0526990 | 0.807098 | 5.966779e-50 | -8.615850e-47 |
| Msa0477390 | Msa0531270 | -0.811596 | 6.470174e-51 | -8.615850e-47 |
| Msa0477390 | Msa0532870 | -0.801255 | 9.813376e-49 | -8.615850e-47 |
| Msa0477390 | Msa0548420 | 0.815226 | 1.030251e-51 | -8.615850e-47 |
| Msa0477390 | Msa0549700 | -0.813795 | 2.136580e-51 | -8.615850e-47 |
| Msa0477390 | Msa0557440 | -0.814904 | 1.214681e-51 | -8.615850e-47 |
| Msa0477390 | Msa0568300 | -0.813351 | 2.674151e-51 | -8.615850e-47 |
| Msa0477390 | Msa0570600 | 0.803338 | 3.656414e-49 | -8.615850e-47 |
| Msa0477390 | Msa0576500 | -0.818906 | 1.534809e-52 | -8.615850e-47 |
| Msa0477390 | Msa0576550 | -0.809382 | 1.945181e-50 | -8.615850e-47 |
| Msa0477390 | Msa0578400 | -0.809067 | 2.272949e-50 | -8.615850e-47 |
| Msa0477390 | Msa0580890 | -0.812794 | 3.543487e-51 | -8.615850e-47 |
| Msa0477390 | Msa0602360 | -0.801975 | 6.987629e-49 | -8.615850e-47 |
| Msa0477390 | Msa0605150 | -0.815841 | 7.520128e-52 | -8.615850e-47 |
| Msa0477390 | Msa0605210 | -0.811150 | 8.085608e-51 | -8.615850e-47 |
| Msa0477390 | Msa0606260 | -0.800872 | 1.175661e-48 | -8.615850e-47 |
| Msa0477390 | Msa0608720 | -0.824797 | 6.643202e-54 | -8.615850e-47 |
| Msa0477390 | Msa0614020 | -0.800446 | 1.435656e-48 | -8.615850e-47 |
| Msa0477390 | Msa0616570 | -0.804302 | 2.305415e-49 | -8.615850e-47 |
| Msa0477390 | Msa0619530 | -0.813376 | 2.641396e-51 | -8.615850e-47 |
| Msa0477390 | Msa0622450 | -0.820471 | 6.740593e-53 | -8.615850e-47 |
| Msa0477390 | Msa0628440 | -0.801227 | 9.945294e-49 | -8.615850e-47 |
| Msa0477390 | Msa0644340 | 0.817304 | 3.534668e-52 | -8.615850e-47 |
| Msa0477390 | Msa0646310 | -0.812232 | 4.701254e-51 | -8.615850e-47 |
| Msa0477390 | Msa0649140 | -0.804868 | 1.757142e-49 | -8.615850e-47 |
| Msa0477390 | Msa0654560 | -0.834256 | 3.328888e-56 | -8.615850e-47 |
| Msa0477390 | Msa0683150 | -0.822300 | 2.549751e-53 | -8.615850e-47 |
| Msa0477390 | Msa0685810 | -0.804799 | 1.816424e-49 | -8.615850e-47 |
| Msa0477390 | Msa0685860 | -0.818779 | 1.640108e-52 | -8.615850e-47 |
| Msa0477390 | Msa0695140 | 0.812456 | 4.201754e-51 | -8.615850e-47 |
| Msa0477390 | Msa0695250 | -0.819273 | 1.266286e-52 | -8.615850e-47 |
| Msa0477390 | Msa0696600 | -0.831754 | 1.395420e-55 | -8.615850e-47 |
| Msa0477390 | Msa0699900 | -0.805188 | 1.505845e-49 | -8.615850e-47 |
| Msa0477390 | Msa0704790 | -0.822239 | 2.634838e-53 | -8.615850e-47 |
| Msa0477390 | Msa0706130 | -0.808025 | 3.792803e-50 | -8.615850e-47 |
| Msa0477390 | Msa0707880 | -0.811448 | 6.965855e-51 | -8.615850e-47 |
| Msa0477390 | Msa0708450 | -0.803018 | 4.257568e-49 | -8.615850e-47 |
| Msa0477390 | Msa0713570 | -0.848802 | 4.859479e-60 | -8.615850e-47 |
| Msa0477390 | Msa0738460 | -0.825367 | 4.871277e-54 | -8.615850e-47 |
| Msa0477390 | Msa0750200 | -0.815701 | 8.076739e-52 | -8.615850e-47 |
| Msa0477390 | Msa0751540 | -0.803138 | 4.022593e-49 | -8.615850e-47 |
| Msa0477390 | Msa0754880 | -0.829265 | 5.669929e-55 | -8.615850e-47 |
| Msa0477390 | Msa0755550 | -0.847225 | 1.323077e-59 | -8.615850e-47 |
| Msa0477390 | Msa0758880 | -0.809796 | 1.584704e-50 | -8.615850e-47 |
| Msa0477390 | Msa0792490 | -0.806225 | 9.123242e-50 | -8.615850e-47 |
| Msa0477390 | Msa0793130 | -0.807826 | 4.181098e-50 | -8.615850e-47 |
| Msa0477390 | Msa0793530 | -0.812247 | 4.665960e-51 | -8.615850e-47 |
| Msa0477390 | Msa0794900 | -0.818283 | 2.125546e-52 | -8.615850e-47 |
| Msa0477390 | Msa0796840 | -0.818470 | 1.927356e-52 | -8.615850e-47 |
| Msa0477390 | Msa0797180 | -0.840977 | 6.279697e-58 | -8.615850e-47 |
| Msa0477390 | Msa0801920 | -0.814380 | 1.587110e-51 | -8.615850e-47 |
| Msa0477390 | Msa0813610 | 0.844950 | 5.502341e-59 | -8.615850e-47 |
| Msa0477390 | Msa0817880 | -0.800460 | 1.426278e-48 | -8.615850e-47 |
| Msa0477390 | Msa0833200 | -0.806547 | 7.801519e-50 | -8.615850e-47 |
| Msa0477390 | Msa0833980 | -0.815225 | 1.030792e-51 | -8.615850e-47 |
| Msa0477390 | Msa0835050 | -0.852487 | 4.470247e-61 | -8.615850e-47 |
| Msa0477390 | Msa0838120 | -0.814812 | 1.273460e-51 | -8.615850e-47 |
| Msa0477390 | Msa0854230 | 0.837782 | 4.243187e-57 | -8.615850e-47 |
| Msa0477390 | Msa0858170 | 0.833179 | 6.187873e-56 | -8.615850e-47 |
| Msa0477390 | Msa0866320 | -0.804502 | 2.094318e-49 | -8.615850e-47 |
| Msa0477390 | Msa0868500 | -0.803454 | 3.458739e-49 | -8.615850e-47 |
| Msa0477390 | Msa0868510 | -0.801141 | 1.035779e-48 | -8.615850e-47 |
| Msa0477390 | Msa0868520 | -0.810803 | 9.613128e-51 | -8.615850e-47 |
| Msa0477390 | Msa0929440 | -0.801576 | 8.436165e-49 | -8.615850e-47 |
| Msa0477390 | Msa0933320 | -0.810306 | 1.230864e-50 | -8.615850e-47 |
| Msa0477390 | Msa0934800 | -0.801108 | 1.051875e-48 | -8.615850e-47 |
| Msa0477390 | Msa0935840 | -0.819225 | 1.298898e-52 | -8.615850e-47 |
| Msa0477390 | Msa0937160 | -0.826881 | 2.126993e-54 | -8.615850e-47 |
| Msa0477390 | Msa0941410 | -0.810677 | 1.023541e-50 | -8.615850e-47 |
| Msa0477390 | Msa0941420 | -0.819514 | 1.116087e-52 | -8.615850e-47 |
| Msa0477390 | Msa0945160 | -0.820303 | 7.364057e-53 | -8.615850e-47 |
| Msa0477390 | Msa0968060 | -0.830702 | 2.531030e-55 | -8.615850e-47 |
| Msa0477390 | Msa0971100 | -0.804106 | 2.532669e-49 | -8.615850e-47 |
| Msa0477390 | Msa0973010 | -0.827247 | 1.737895e-54 | -8.615850e-47 |
| Msa0477390 | Msa0978540 | -0.801678 | 8.039595e-49 | -8.615850e-47 |
| Msa0477390 | Msa0978550 | -0.801266 | 9.766889e-49 | -8.615850e-47 |
| Msa0477390 | Msa0978560 | -0.810431 | 1.156553e-50 | -8.615850e-47 |
| Msa0477390 | Msa0984230 | -0.819771 | 9.747596e-53 | -8.615850e-47 |
| Msa0477390 | Msa1002550 | -0.816395 | 5.652840e-52 | -8.615850e-47 |
| Msa0477390 | Msa1028150 | 0.843374 | 1.457801e-58 | -8.615850e-47 |
| Msa0477390 | Msa1028890 | -0.822437 | 2.370093e-53 | -8.615850e-47 |
| Msa0477390 | Msa1031190 | -0.807795 | 4.244727e-50 | -8.615850e-47 |
| Msa0477390 | Msa1031620 | -0.816053 | 6.742700e-52 | -8.615850e-47 |
| Msa0477390 | Msa1033250 | -0.824333 | 8.542057e-54 | -8.615850e-47 |
| Msa0477390 | Msa1036260 | -0.819264 | 1.272509e-52 | -8.615850e-47 |
| Msa0477390 | Msa1037440 | -0.819281 | 1.260861e-52 | -8.615850e-47 |
| Msa0477390 | Msa1041570 | -0.819615 | 1.058044e-52 | -8.615850e-47 |
| Msa0477390 | Msa1041720 | 0.815831 | 7.556435e-52 | -8.615850e-47 |
| Msa0477390 | Msa1050970 | 0.806520 | 7.904830e-50 | -8.615850e-47 |
| Msa0477390 | Msa1062060 | 0.800089 | 1.697298e-48 | -8.615850e-47 |
| Msa0477390 | Msa1062070 | 0.820870 | 5.458066e-53 | -8.615850e-47 |
| Msa0477390 | Msa1066770 | 0.859957 | 2.885543e-63 | -8.615850e-47 |
| Msa0477390 | Msa1067000 | 0.845955 | 2.940478e-59 | -8.615850e-47 |
| Msa0477390 | Msa1068010 | -0.822016 | 2.967300e-53 | -8.615850e-47 |
| Msa0477390 | Msa1070370 | -0.808492 | 3.016510e-50 | -8.615850e-47 |
| Msa0477390 | Msa1072850 | -0.816030 | 6.823078e-52 | -8.615850e-47 |
| Msa0477390 | Msa1074210 | 0.821854 | 3.234753e-53 | -8.615850e-47 |
| Msa0477390 | Msa1078120 | -0.802787 | 4.752216e-49 | -8.615850e-47 |
| Msa0477390 | Msa1078600 | -0.818873 | 1.561872e-52 | -8.615850e-47 |
| Msa0477390 | Msa1078770 | -0.815627 | 8.389457e-52 | -8.615850e-47 |
| Msa0477390 | Msa1095880 | -0.809645 | 1.707647e-50 | -8.615850e-47 |
| Msa0477390 | Msa1112190 | 0.853650 | 2.076780e-61 | -8.615850e-47 |
| Msa0477390 | Msa1113460 | -0.812584 | 3.939034e-51 | -8.615850e-47 |
| Msa0477390 | Msa1114680 | 0.805323 | 1.410732e-49 | -8.615850e-47 |
| Msa0477390 | Msa1118870 | -0.803268 | 3.781281e-49 | -8.615850e-47 |
| Msa0477390 | Msa1118890 | -0.812131 | 4.946305e-51 | -8.615850e-47 |
| Msa0477390 | Msa1119420 | -0.804310 | 2.297406e-49 | -8.615850e-47 |
| Msa0477390 | Msa1123260 | -0.808947 | 2.410905e-50 | -8.615850e-47 |
| Msa0477390 | Msa1126980 | -0.807939 | 3.955345e-50 | -8.615850e-47 |
| Msa0477390 | Msa1129510 | -0.808419 | 3.126599e-50 | -8.615850e-47 |
| Msa0477390 | Msa1129540 | 0.833486 | 5.188455e-56 | -8.615850e-47 |
| Msa0477390 | Msa1130150 | -0.825950 | 3.543721e-54 | -8.615850e-47 |
| Msa0477390 | Msa1130850 | -0.837271 | 5.734013e-57 | -8.615850e-47 |
| Msa0477390 | Msa1130910 | -0.813898 | 2.026784e-51 | -8.615850e-47 |
| Msa0477390 | Msa1132250 | -0.811630 | 6.360844e-51 | -8.615850e-47 |
| Msa0477390 | Msa1133690 | 0.831883 | 1.296537e-55 | -8.615850e-47 |
| Msa0477390 | Msa1137980 | 0.803733 | 3.027278e-49 | -8.615850e-47 |
| Msa0477390 | Msa1143060 | -0.815807 | 7.652330e-52 | -8.615850e-47 |
| Msa0477390 | Msa1146010 | 0.866218 | 3.349175e-65 | -8.615850e-47 |
| Msa0477390 | Msa1150750 | 0.827537 | 1.480819e-54 | -8.615850e-47 |
| Msa0477390 | Msa1156430 | -0.826696 | 2.354685e-54 | -8.615850e-47 |
| Msa0477390 | Msa1158180 | -0.805621 | 1.221757e-49 | -8.615850e-47 |
| Msa0477390 | Msa1161060 | -0.828588 | 8.270712e-55 | -8.615850e-47 |
| Msa0477390 | Msa1166470 | -0.819635 | 1.047243e-52 | -8.615850e-47 |
| Msa0477390 | Msa1169600 | -0.811973 | 5.354069e-51 | -8.615850e-47 |
| Msa0477390 | Msa1175340 | -0.801383 | 9.242188e-49 | -8.615850e-47 |
| Msa0477390 | Msa1184100 | -0.820099 | 8.203579e-53 | -8.615850e-47 |
| Msa0477390 | Msa1190510 | -0.800368 | 1.489206e-48 | -8.615850e-47 |
| Msa0477390 | Msa1190670 | -0.800219 | 1.596954e-48 | -8.615850e-47 |
| Msa0477390 | Msa1203320 | -0.803802 | 2.929545e-49 | -8.615850e-47 |
| Msa0477390 | Msa1204870 | -0.816021 | 6.852983e-52 | -8.615850e-47 |
| Msa0477390 | Msa1204900 | -0.812301 | 4.542195e-51 | -8.615850e-47 |
| Msa0477390 | Msa1207770 | -0.800507 | 1.395097e-48 | -8.615850e-47 |
| Msa0477390 | Msa1212150 | -0.802784 | 4.759055e-49 | -8.615850e-47 |
| Msa0477390 | Msa1222900 | -0.805777 | 1.133120e-49 | -8.615850e-47 |
| Msa0477390 | Msa1225240 | -0.800821 | 1.204029e-48 | -8.615850e-47 |
| Msa0477390 | Msa1225280 | -0.838819 | 2.292695e-57 | -8.615850e-47 |
| Msa0477390 | Msa1228260 | -0.827017 | 1.973283e-54 | -8.615850e-47 |
| Msa0477390 | Msa1239190 | 0.803192 | 3.920147e-49 | -8.615850e-47 |
| Msa0477390 | Msa1256490 | -0.816183 | 6.305610e-52 | -8.615850e-47 |
| Msa0477390 | Msa1257860 | -0.802881 | 4.545932e-49 | -8.615850e-47 |
| Msa0477390 | Msa1266750 | -0.805275 | 1.443848e-49 | -8.615850e-47 |
| Msa0477390 | Msa1271220 | -0.826490 | 2.636579e-54 | -8.615850e-47 |
| Msa0477390 | Msa1291070 | -0.819099 | 1.387073e-52 | -8.615850e-47 |
| Msa0477390 | Msa1296810 | -0.810889 | 9.208592e-51 | -8.615850e-47 |
| Msa0477390 | Msa1301610 | -0.821355 | 4.219168e-53 | -8.615850e-47 |
| Msa0477390 | Msa1303620 | -0.821395 | 4.129986e-53 | -8.615850e-47 |
| Msa0477390 | Msa1303690 | -0.815965 | 7.053629e-52 | -8.615850e-47 |
| Msa0477390 | Msa1308430 | -0.821536 | 3.832332e-53 | -8.615850e-47 |
| Msa0477390 | Msa1315880 | -0.812219 | 4.732966e-51 | -8.615850e-47 |
| Msa0477390 | Msa1325260 | -0.811429 | 7.033682e-51 | -8.615850e-47 |
| Msa0477390 | Msa1331530 | -0.805724 | 1.162615e-49 | -8.615850e-47 |
| Msa0477390 | Msa1341710 | -0.812154 | 4.889625e-51 | -8.615850e-47 |
| Msa0477390 | Msa1341850 | -0.808277 | 3.351384e-50 | -8.615850e-47 |
| Msa0477390 | Msa1350590 | -0.823827 | 1.122866e-53 | -8.615850e-47 |
| Msa0477390 | Msa1352530 | 0.803639 | 3.167628e-49 | -8.615850e-47 |
| Msa0477390 | Msa1361580 | -0.824793 | 6.656437e-54 | -8.615850e-47 |
| Msa0477390 | Msa1363170 | -0.816216 | 6.200523e-52 | -8.615850e-47 |
| Msa0477390 | Msa1371690 | -0.801369 | 9.301871e-49 | -8.615850e-47 |
| Msa0477390 | Msa1372460 | -0.801666 | 8.085162e-49 | -8.615850e-47 |
| Msa0477390 | Msa1372680 | -0.802469 | 5.528399e-49 | -8.615850e-47 |
| Msa0477390 | Msa1373420 | -0.808117 | 3.625652e-50 | -8.615850e-47 |
| Msa0477390 | Msa1373570 | -0.804530 | 2.067127e-49 | -8.615850e-47 |
| Msa0477390 | Msa1373930 | -0.805090 | 1.578918e-49 | -8.615850e-47 |
| Msa0477390 | Msa1375650 | -0.816852 | 4.466370e-52 | -8.615850e-47 |
| Msa0477390 | Msa1375730 | 0.802907 | 4.489682e-49 | -8.615850e-47 |
| Msa0477390 | Msa1386910 | -0.806702 | 7.235628e-50 | -8.615850e-47 |
| Msa0477390 | Msa1388010 | -0.818660 | 1.745150e-52 | -8.615850e-47 |
| Msa0477390 | Msa1395380 | -0.830276 | 3.216182e-55 | -8.615850e-47 |
| Msa0477390 | Msa1403820 | -0.810478 | 1.130066e-50 | -8.615850e-47 |
| Msa0477390 | Msa1408230 | -0.813850 | 2.077228e-51 | -8.615850e-47 |
| Msa0477390 | Msa1412330 | -0.804829 | 1.790052e-49 | -8.615850e-47 |
| Msa0477390 | Msa1412810 | -0.834144 | 3.551397e-56 | -8.615850e-47 |
| Msa0477390 | Msa1415510 | -0.822350 | 2.482839e-53 | -8.615850e-47 |
| Msa0477390 | Msa1416100 | 0.873750 | 1.154047e-67 | -8.615850e-47 |
| Msa0477390 | Msa1423560 | -0.812197 | 4.785033e-51 | -8.615850e-47 |
| Msa0477390 | Msa1429180 | -0.812550 | 4.007944e-51 | -8.615850e-47 |
| Msa0477390 | Msa1439000 | -0.807370 | 5.224162e-50 | -8.615850e-47 |
| Msa0477390 | Msa1444130 | -0.808783 | 2.614313e-50 | -8.615850e-47 |
| Msa0477390 | Msa1444690 | -0.815930 | 7.182263e-52 | -8.615850e-47 |
| Msa0477390 | Msa1452800 | -0.824606 | 7.369884e-54 | -8.615850e-47 |
| Msa0477390 | Msa1454300 | -0.831235 | 1.872735e-55 | -8.615850e-47 |
| Msa0477390 | Msa1461690 | 0.867946 | 9.403377e-66 | -8.615850e-47 |
| Msa0477390 | Msa1463640 | 0.838564 | 2.668372e-57 | -8.615850e-47 |
| Msa0246510 | Msa0477390 | -0.820773 | 5.744734e-53 | -8.615850e-47 |
| Msa0255770 | Msa0477390 | -0.828033 | 1.125911e-54 | -8.615850e-47 |
| Msa0259450 | Msa0477390 | -0.827526 | 1.490368e-54 | -8.615850e-47 |
| Msa0259570 | Msa0477390 | -0.827719 | 1.339756e-54 | -8.615850e-47 |
| Msa0266150 | Msa0477390 | -0.806752 | 7.062651e-50 | -8.615850e-47 |
| Msa0266330 | Msa0477390 | -0.813844 | 2.083256e-51 | -8.615850e-47 |
| Msa0270730 | Msa0477390 | -0.816634 | 4.998248e-52 | -8.615850e-47 |
| Msa0271970 | Msa0477390 | -0.808149 | 3.569216e-50 | -8.615850e-47 |
| Msa0285510 | Msa0477390 | -0.816256 | 6.073570e-52 | -8.615850e-47 |
| Msa0298820 | Msa0477390 | -0.810809 | 9.583015e-51 | -8.615850e-47 |
| Msa0299130 | Msa0477390 | -0.802779 | 4.770466e-49 | -8.615850e-47 |
| Msa0305630 | Msa0477390 | -0.834088 | 3.668102e-56 | -8.615850e-47 |
| Msa0315720 | Msa0477390 | -0.800944 | 1.136134e-48 | -8.615850e-47 |
| Msa0324200 | Msa0477390 | 0.803299 | 3.725128e-49 | -8.615850e-47 |
| Msa0341950 | Msa0477390 | -0.813461 | 2.530167e-51 | -8.615850e-47 |
| Msa0343230 | Msa0477390 | -0.815279 | 1.002618e-51 | -8.615850e-47 |
| Msa0358750 | Msa0477390 | -0.814177 | 1.758998e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477390 | MtrunA17_Chr3g0139301 | 89.109 | 303 | 24 | 4 | 1 | 302 | 1 | 295 | 0.0 | 543 |
| Msa0477390 | MtrunA17_Chr1g0147491 | 57.383 | 298 | 102 | 12 | 21 | 302 | 51 | 339 | 1.83e-84 | 257 |
| Msa0477390 | MtrunA17_Chr3g0139571 | 82.432 | 74 | 13 | 0 | 127 | 200 | 1 | 74 | 1.86e-30 | 110 |
| Msa0477390 | MtrunA17_Chr1g0190761 | 49.306 | 144 | 66 | 4 | 98 | 238 | 177 | 316 | 2.32e-23 | 99.0 |
| Msa0477390 | MtrunA17_Chr7g0274141 | 50.725 | 138 | 61 | 3 | 78 | 215 | 150 | 280 | 2.45e-22 | 95.9 |
| Msa0477390 | MtrunA17_Chr1g0155551 | 32.203 | 118 | 80 | 0 | 100 | 217 | 2 | 119 | 4.33e-13 | 65.9 |
| Msa0477390 | MtrunA17_Chr4g0035414 | 35.484 | 93 | 60 | 0 | 115 | 207 | 17 | 109 | 2.78e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477390 | AT5G24800.1 | 45.148 | 237 | 102 | 9 | 73 | 302 | 62 | 277 | 3.08e-45 | 155 |
| Msa0477390 | AT5G28770.1 | 48.905 | 137 | 64 | 3 | 102 | 238 | 122 | 252 | 1.65e-20 | 90.1 |
| Msa0477390 | AT5G28770.2 | 48.905 | 137 | 64 | 3 | 102 | 238 | 129 | 259 | 1.66e-20 | 90.1 |
| Msa0477390 | AT5G28770.3 | 53.000 | 100 | 45 | 1 | 102 | 201 | 129 | 226 | 1.90e-16 | 77.8 |
| Msa0477390 | AT4G02640.3 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 1.54e-13 | 70.9 |
| Msa0477390 | AT4G02640.2 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 1.55e-13 | 70.9 |
| Msa0477390 | AT4G02640.4 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 1.71e-13 | 70.9 |
| Msa0477390 | AT4G02640.1 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 1.80e-13 | 70.9 |
| Msa0477390 | AT3G54620.1 | 46.429 | 84 | 45 | 0 | 126 | 209 | 229 | 312 | 3.37e-11 | 63.9 |
Find 79 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTCAGCCATCTATTTA+TGG | 0.124761 | 3_3:+81585194 | Msa0477390:CDS |
| TAAATATTTGGCCTTAATTA+AGG | 0.134054 | 3_3:+81586312 | Msa0477390:exon |
| TTTGGTTTATTAGCTGAAAC+TGG | 0.195300 | 3_3:-81585327 | None:intergenic |
| AGTGGTGAGAATAGAGAAAA+TGG | 0.221718 | 3_3:-81580989 | None:intergenic |
| TTTGACAGAAATACCTTCTA+TGG | 0.244115 | 3_3:-81585461 | None:intergenic |
| CTATGAGTTGTGTAAATATT+TGG | 0.245467 | 3_3:+81586300 | Msa0477390:CDS |
| ATATTATTCTCTTTGTTGTT+TGG | 0.273240 | 3_3:-81585345 | None:intergenic |
| AGTTTACCGGTAGGAGAGTT+TGG | 0.300540 | 3_3:-81581155 | None:intergenic |
| AATTCGAATCTTGCTGGGTT+TGG | 0.309808 | 3_3:+81586224 | Msa0477390:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.316743 | 3_3:+81586232 | Msa0477390:CDS |
| GTGCACAATTCGAATCTTGC+TGG | 0.321584 | 3_3:+81586218 | Msa0477390:CDS |
| TCAAGTGAAACCCTTAATTA+AGG | 0.326188 | 3_3:-81586323 | None:intergenic |
| AACACTATACAAACAGTTTA+CGG | 0.339230 | 3_3:+81585830 | Msa0477390:CDS |
| AAATATTTGGCCTTAATTAA+GGG | 0.379075 | 3_3:+81586313 | Msa0477390:exon |
| AGCACTGATGGTGGAATGTT+TGG | 0.379902 | 3_3:-81585165 | None:intergenic |
| AATGTTTGGGAGTGAAGTTT+TGG | 0.394976 | 3_3:-81585151 | None:intergenic |
| CTCTCTTCTCCGGCGAGCGA+TGG | 0.398900 | 3_3:+81581023 | Msa0477390:exon |
| ATTTCCCTGCAGGACATTGA+TGG | 0.400011 | 3_3:-81586162 | None:intergenic |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | 3_3:-81586129 | None:intergenic |
| CCACACATAATAATCTTTCA+TGG | 0.410514 | 3_3:-81586550 | None:intergenic |
| TGAATCTCGATTACGAGTTT+CGG | 0.410788 | 3_3:+81581076 | Msa0477390:CDS |
| AGAATAGAGAAAATGGGAAA+AGG | 0.412399 | 3_3:-81580982 | None:intergenic |
| GAATAGAGAAAATGGGAAAA+GGG | 0.416725 | 3_3:-81580981 | None:intergenic |
| ACAATGATGTCGTCGACAAT+GGG | 0.419225 | 3_3:+81586264 | Msa0477390:CDS |
| TTGATATGAAACGCCATAGA+AGG | 0.425277 | 3_3:+81585448 | Msa0477390:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | 3_3:+81586016 | Msa0477390:intron |
| TTTGTCTGAACTTGAGTCTC+AGG | 0.431765 | 3_3:+81585617 | Msa0477390:CDS |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | 3_3:-81586192 | None:intergenic |
| TCCGACGAGGATAATGAATC+AGG | 0.453955 | 3_3:+81585399 | Msa0477390:CDS |
| TTTCATGGCACTGTATTGAA+TGG | 0.460117 | 3_3:-81586535 | None:intergenic |
| GTATCCAAGTCTTGCCGATA+CGG | 0.463283 | 3_3:+81581098 | Msa0477390:CDS |
| CAGCCATCTATTTATGGCAC+TGG | 0.467277 | 3_3:+81585200 | Msa0477390:CDS |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | 3_3:+81586157 | Msa0477390:CDS |
| ATACCAGTGCCATAAATAGA+TGG | 0.477311 | 3_3:-81585203 | None:intergenic |
| TGCACAATTCGAATCTTGCT+GGG | 0.484135 | 3_3:+81586219 | Msa0477390:CDS |
| ACAAAGAGAATAATATCAAA+GGG | 0.493368 | 3_3:+81585352 | Msa0477390:CDS |
| CGCTTTCCAAACTCTCCTAC+CGG | 0.497621 | 3_3:+81581149 | Msa0477390:CDS |
| CACAACTCATAGCATTGCTT+AGG | 0.501122 | 3_3:-81586289 | None:intergenic |
| TACAATGATGTCGTCGACAA+TGG | 0.501669 | 3_3:+81586263 | Msa0477390:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | 3_3:-81586158 | None:intergenic |
| GTGGTGAGAATAGAGAAAAT+GGG | 0.519514 | 3_3:-81580988 | None:intergenic |
| GCCTCCGTATCGGCAAGACT+TGG | 0.526307 | 3_3:-81581102 | None:intergenic |
| TTGTCGACGACATCATTGTA+AGG | 0.529396 | 3_3:-81586260 | None:intergenic |
| AAGAGAGAAAACTTAAACAG+TGG | 0.530559 | 3_3:-81581007 | None:intergenic |
| CCGTTGTTGCCATCGCTCGC+CGG | 0.532690 | 3_3:-81581032 | None:intergenic |
| TTGGTTTATTAGCTGAAACT+GGG | 0.535446 | 3_3:-81585326 | None:intergenic |
| AGGCACTATTATTTCCCTGC+AGG | 0.536074 | 3_3:-81586172 | None:intergenic |
| GCACTGATGGTGGAATGTTT+GGG | 0.539183 | 3_3:-81585164 | None:intergenic |
| TGTAGAAGCTTTGAGAGCTA+AGG | 0.540256 | 3_3:+81585908 | Msa0477390:CDS |
| AACAAAGAGAATAATATCAA+AGG | 0.546304 | 3_3:+81585351 | Msa0477390:CDS |
| GGAAATAATAGTGCCTCATA+CGG | 0.548614 | 3_3:+81586179 | Msa0477390:CDS |
| GATACGGAGGCATTCATGAC+CGG | 0.550151 | 3_3:+81581114 | Msa0477390:CDS |
| ACCTGATTCATTATCCTCGT+CGG | 0.562154 | 3_3:-81585400 | None:intergenic |
| AGAATCAATAGTAGCACTGA+TGG | 0.570342 | 3_3:-81585177 | None:intergenic |
| GCGAGTCAGCCAAGAGGTCA+AGG | 0.571020 | 3_3:+81585577 | Msa0477390:CDS |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | 3_3:-81586057 | None:intergenic |
| CCGGCGAGCGATGGCAACAA+CGG | 0.577221 | 3_3:+81581032 | Msa0477390:exon |
| ATCAATAGTAGCACTGATGG+TGG | 0.581341 | 3_3:-81585174 | None:intergenic |
| GATTCATTATCCTCGTCGGA+TGG | 0.582930 | 3_3:-81585396 | None:intergenic |
| GGTCATGAATGCCTCCGTAT+CGG | 0.589824 | 3_3:-81581112 | None:intergenic |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | 3_3:+81586194 | Msa0477390:CDS |
| AATATCAAAGGGACATCAAG+TGG | 0.598499 | 3_3:+81585363 | Msa0477390:CDS |
| TACTATTCAACAATTTCATG+AGG | 0.600013 | 3_3:+81585854 | Msa0477390:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | 3_3:+81586190 | Msa0477390:CDS |
| AATAATAGTGCCTCATACGG+TGG | 0.620063 | 3_3:+81586182 | Msa0477390:CDS |
| TCCAAGTCTTGCCGATACGG+AGG | 0.642233 | 3_3:+81581101 | Msa0477390:CDS |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | 3_3:+81586158 | Msa0477390:CDS |
| GAAAGCGGCAGAGCAAACTC+CGG | 0.658673 | 3_3:-81581133 | None:intergenic |
| GTATTGTATGACAAAGTGAG+AGG | 0.663415 | 3_3:-81586513 | None:intergenic |
| CGGTAGGAGAGTTTGGAAAG+CGG | 0.664439 | 3_3:-81581148 | None:intergenic |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | 3_3:+81586010 | Msa0477390:intron |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.684615 | 3_3:+81585580 | Msa0477390:CDS |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | 3_3:-81586110 | None:intergenic |
| TTCATCTGATCCATCCGACG+AGG | 0.710432 | 3_3:+81585386 | Msa0477390:CDS |
| CCATGAAAGATTATTATGTG+TGG | 0.711478 | 3_3:+81586550 | Msa0477390:three_prime_UTR |
| CTAATTGCGAGTCAGCCAAG+AGG | 0.711883 | 3_3:+81585571 | Msa0477390:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | 3_3:-81586139 | None:intergenic |
| CAATGATGTCGTCGACAATG+GGG | 0.731606 | 3_3:+81586265 | Msa0477390:CDS |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | 3_3:-81586146 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAAAAATGTTTG+TGG | + | chr3_3:81581614-81581633 | Msa0477390:intron | 10.0% |
| !!! | ATTCTATTATTTTGATTAAT+AGG | + | chr3_3:81582552-81582571 | Msa0477390:intron | 10.0% |
| !! | GTTAAATTTCAAAATAAAAA+AGG | + | chr3_3:81583431-81583450 | Msa0477390:intron | 10.0% |
| !!! | TTTTATTTTATTTGAAGACA+TGG | - | chr3_3:81581352-81581371 | None:intergenic | 15.0% |
| !! | ACAAATAGAGTTAAATTTAT+AGG | - | chr3_3:81581397-81581416 | None:intergenic | 15.0% |
| !! | TATTAGTAGTATAATATTAG+TGG | + | chr3_3:81581924-81581943 | Msa0477390:intron | 15.0% |
| !!! | AGAATATTGTTTTTAATTGT+GGG | - | chr3_3:81582415-81582434 | None:intergenic | 15.0% |
| !!! | TAGAATATTGTTTTTAATTG+TGG | - | chr3_3:81582416-81582435 | None:intergenic | 15.0% |
| !! | TTGATAAAATGAAATTGATT+AGG | + | chr3_3:81582584-81582603 | Msa0477390:intron | 15.0% |
| !! | ATCTATTATTACCAAAATTA+AGG | + | chr3_3:81582615-81582634 | Msa0477390:intron | 15.0% |
| !! | ATAAAGGAAAATGAATTTAT+TGG | + | chr3_3:81583103-81583122 | Msa0477390:intron | 15.0% |
| !!! | TCTAAAACTTATAAATTGAT+TGG | - | chr3_3:81583184-81583203 | None:intergenic | 15.0% |
| !! | AATATAACAATTGTTATGAA+GGG | + | chr3_3:81583362-81583381 | Msa0477390:intron | 15.0% |
| !! | TTAATATAATTAATCTCGTT+AGG | + | chr3_3:81584019-81584038 | Msa0477390:intron | 15.0% |
| !!! | GAATTTCATTTTTTTTTTGA+GGG | - | chr3_3:81584198-81584217 | None:intergenic | 15.0% |
| !!! | TGAATTTCATTTTTTTTTTG+AGG | - | chr3_3:81584199-81584218 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAGAAATGAAG+AGG | + | chr3_3:81584548-81584567 | Msa0477390:intron | 15.0% |
| !! | CTAAAATAAATTCTTCTTAA+GGG | - | chr3_3:81585027-81585046 | None:intergenic | 15.0% |
| !!! | TCTAAAATAAATTCTTCTTA+AGG | - | chr3_3:81585028-81585047 | None:intergenic | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | chr3_3:81585995-81586014 | Msa0477390:intron | 15.0% |
| !!! | AATCAAATACATCAGTTTTT+TGG | + | chr3_3:81581533-81581552 | Msa0477390:intron | 20.0% |
| !! | AAAGAATATTAATCTTGTGT+AGG | - | chr3_3:81581962-81581981 | None:intergenic | 20.0% |
| !! | AGATTAATATTCTTTGCATT+CGG | + | chr3_3:81581967-81581986 | Msa0477390:intron | 20.0% |
| !! | TTACAACATTATGTGAATAT+GGG | - | chr3_3:81582177-81582196 | None:intergenic | 20.0% |
| !! | TTTACAACATTATGTGAATA+TGG | - | chr3_3:81582178-81582197 | None:intergenic | 20.0% |
| !! | ATTTATGAAACCCATATAAA+TGG | - | chr3_3:81582508-81582527 | None:intergenic | 20.0% |
| !!! | TCAAACTATTACCTTAATTT+TGG | - | chr3_3:81582629-81582648 | None:intergenic | 20.0% |
| !! | TATGTTCCTATTTAATCTAA+TGG | + | chr3_3:81582885-81582904 | Msa0477390:intron | 20.0% |
| !! | GAATATAACAATTGTTATGA+AGG | + | chr3_3:81583361-81583380 | Msa0477390:intron | 20.0% |
| !! | ATATAACAATTGTTATGAAG+GGG | + | chr3_3:81583363-81583382 | Msa0477390:intron | 20.0% |
| !!! | GTTGTTTTTTTTAAAGCAAA+CGG | + | chr3_3:81583699-81583718 | Msa0477390:intron | 20.0% |
| !!! | TTGTTTTTTTTAAAGCAAAC+GGG | + | chr3_3:81583700-81583719 | Msa0477390:intron | 20.0% |
| !!! | TTGTTTTTTTTAAAGCAAAC+TGG | + | chr3_3:81583700-81583719 | Msa0477390:intron | 20.0% |
| !!! | TTAGTGTCTTATTATTTACT+AGG | + | chr3_3:81583953-81583972 | Msa0477390:intron | 20.0% |
| !!! | TACTAGGTTTATCATTTTTT+TGG | + | chr3_3:81583969-81583988 | Msa0477390:intron | 20.0% |
| !!! | TCTTGTTTCTTTTCTTTTTT+TGG | - | chr3_3:81584067-81584086 | None:intergenic | 20.0% |
| !!! | TTAATAGAGAAAGTTTTACA+CGG | + | chr3_3:81584106-81584125 | Msa0477390:intron | 20.0% |
| !!! | AAATTAATAGTTTTACACTG+TGG | - | chr3_3:81584255-81584274 | None:intergenic | 20.0% |
| !! | AAAAACTATAAACTACTAGT+AGG | + | chr3_3:81584317-81584336 | Msa0477390:intron | 20.0% |
| !! | AAAACTATAAACTACTAGTA+GGG | + | chr3_3:81584318-81584337 | Msa0477390:intron | 20.0% |
| !!! | GATTCTTATTCAAATTTTTG+AGG | - | chr3_3:81584376-81584395 | None:intergenic | 20.0% |
| !!! | AAACTTTAAAAGATACTACA+TGG | + | chr3_3:81584757-81584776 | Msa0477390:intron | 20.0% |
| !!! | CATATAGTATTTTTTGTTGT+TGG | - | chr3_3:81584788-81584807 | None:intergenic | 20.0% |
| !! | CAACAACAAAAAATACTATA+TGG | + | chr3_3:81584786-81584805 | Msa0477390:intron | 20.0% |
| !! | AACAAAAAATACTATATGGT+TGG | + | chr3_3:81584790-81584809 | Msa0477390:intron | 20.0% |
| !!! | ATATTATTCTCTTTGTTGTT+TGG | - | chr3_3:81585348-81585367 | None:intergenic | 20.0% |
| !! | AACAAAGAGAATAATATCAA+AGG | + | chr3_3:81585351-81585370 | Msa0477390:CDS | 20.0% |
| !! | ACAAAGAGAATAATATCAAA+GGG | + | chr3_3:81585352-81585371 | Msa0477390:CDS | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | chr3_3:81585667-81585686 | Msa0477390:intron | 20.0% |
| !!! | TAAATATTTGGCCTTAATTA+AGG | + | chr3_3:81586312-81586331 | Msa0477390:exon | 20.0% |
| !!! | AAATATTTGGCCTTAATTAA+GGG | + | chr3_3:81586313-81586332 | Msa0477390:exon | 20.0% |
| !!! | AAGTTTGTTCTTGTTATTTC+CGG | - | chr3_3:81581315-81581334 | None:intergenic | 25.0% |
| ! | ACTCTATTTGTTTAGTAAGT+TGG | + | chr3_3:81581406-81581425 | Msa0477390:intron | 25.0% |
| !!! | AGTTTTTTGGCTGATAATTT+GGG | + | chr3_3:81581546-81581565 | Msa0477390:intron | 25.0% |
| ! | ATTGAGATATATGAGAGAAA+GGG | + | chr3_3:81581569-81581588 | Msa0477390:intron | 25.0% |
| ! | AAAAATGTTTGTGGACATAT+TGG | + | chr3_3:81581623-81581642 | Msa0477390:intron | 25.0% |
| ! | TACTATGAATTGAAGACATT+GGG | - | chr3_3:81581860-81581879 | None:intergenic | 25.0% |
| ! | TAGTAGTATAATATTAGTGG+TGG | + | chr3_3:81581927-81581946 | Msa0477390:intron | 25.0% |
| ! | AGTAGTATAATATTAGTGGT+GGG | + | chr3_3:81581928-81581947 | Msa0477390:intron | 25.0% |
| ! | GTGTGTAAAAAAATTTAGTG+TGG | - | chr3_3:81582099-81582118 | None:intergenic | 25.0% |
| ! | AAGAATAAAATGAAGAACGA+AGG | - | chr3_3:81582141-81582160 | None:intergenic | 25.0% |
| ! | TACAACATTATGTGAATATG+GGG | - | chr3_3:81582176-81582195 | None:intergenic | 25.0% |
| !! | ATGAGGTTTAAAGTAATAGA+TGG | - | chr3_3:81582219-81582238 | None:intergenic | 25.0% |
| ! | TAAAAACAACTTGATGAAGA+TGG | - | chr3_3:81582289-81582308 | None:intergenic | 25.0% |
| ! | ACAAAAACAAACATAAACAG+AGG | - | chr3_3:81582470-81582489 | None:intergenic | 25.0% |
| ! | TGATAGTTTCTCCATTTATA+TGG | + | chr3_3:81582494-81582513 | Msa0477390:intron | 25.0% |
| ! | GATAGTTTCTCCATTTATAT+GGG | + | chr3_3:81582495-81582514 | Msa0477390:intron | 25.0% |
| ! | ACTTGTGAGATATAATAAGT+AGG | - | chr3_3:81582532-81582551 | None:intergenic | 25.0% |
| !!! | AAATCAGAGTTTTAGATGAA+TGG | + | chr3_3:81582662-81582681 | Msa0477390:intron | 25.0% |
| !!! | AATCAGAGTTTTAGATGAAT+GGG | + | chr3_3:81582663-81582682 | Msa0477390:intron | 25.0% |
| !! | TAGGAACATAGATTTTATGA+TGG | - | chr3_3:81582875-81582894 | None:intergenic | 25.0% |
| ! | TCTTTGCCATTAGATTAAAT+AGG | - | chr3_3:81582894-81582913 | None:intergenic | 25.0% |
| ! | TTATTCATTTGAAGAGTCAT+GGG | - | chr3_3:81583087-81583106 | None:intergenic | 25.0% |
| ! | TTTATTCATTTGAAGAGTCA+TGG | - | chr3_3:81583088-81583107 | None:intergenic | 25.0% |
| ! | ATGACTCTTCAAATGAATAA+AGG | + | chr3_3:81583087-81583106 | Msa0477390:intron | 25.0% |
| ! | TTAATCAACGTTTATATCTC+TGG | + | chr3_3:81583141-81583160 | Msa0477390:intron | 25.0% |
| ! | CAATTCTTCAAATGTAACTT+AGG | - | chr3_3:81583227-81583246 | None:intergenic | 25.0% |
| ! | TATAACAATTGTTATGAAGG+GGG | + | chr3_3:81583364-81583383 | Msa0477390:intron | 25.0% |
| !!! | GGGTATCGAAATTAATATAA+AGG | + | chr3_3:81584338-81584357 | Msa0477390:intron | 25.0% |
| !! | CGAAATTAATATAAAGGTAC+AGG | + | chr3_3:81584344-81584363 | Msa0477390:intron | 25.0% |
| !!! | TATTCAAATTTTTGAGGTCT+TGG | - | chr3_3:81584370-81584389 | None:intergenic | 25.0% |
| ! | TCTCAATTTCATTTGATAGA+TGG | - | chr3_3:81584403-81584422 | None:intergenic | 25.0% |
| !!! | ATACATTTTTCAAGTTGAGT+TGG | - | chr3_3:81584733-81584752 | None:intergenic | 25.0% |
| ! | CTCAACTTGAAAAATGTATA+TGG | + | chr3_3:81584734-81584753 | Msa0477390:intron | 25.0% |
| !! | ATACATGTAGTTTGACATTT+TGG | + | chr3_3:81585275-81585294 | Msa0477390:intron | 25.0% |
| !! | ATTTTGGATTGAATTGCATA+TGG | + | chr3_3:81585291-81585310 | Msa0477390:intron | 25.0% |
| ! | ACAACACTTCTTATTATATG+TGG | + | chr3_3:81585500-81585519 | Msa0477390:intron | 25.0% |
| ! | AACACTATACAAACAGTTTA+CGG | + | chr3_3:81585830-81585849 | Msa0477390:CDS | 25.0% |
| ! | TACTATTCAACAATTTCATG+AGG | + | chr3_3:81585854-81585873 | Msa0477390:CDS | 25.0% |
| ! | CTATGAGTTGTGTAAATATT+TGG | + | chr3_3:81586300-81586319 | Msa0477390:CDS | 25.0% |
| !! | GTTGAACGTTTTGTATAAAA+AGG | + | chr3_3:81586431-81586450 | Msa0477390:three_prime_UTR | 25.0% |
| GAATAGAGAAAATGGGAAAA+GGG | - | chr3_3:81580984-81581003 | None:intergenic | 30.0% | |
| AGAATAGAGAAAATGGGAAA+AGG | - | chr3_3:81580985-81581004 | None:intergenic | 30.0% | |
| AAGAGAGAAAACTTAAACAG+TGG | - | chr3_3:81581010-81581029 | None:intergenic | 30.0% | |
| !! | TTTAAGTTTTCTCTCTTCTC+CGG | + | chr3_3:81581013-81581032 | Msa0477390:five_prime_UTR | 30.0% |
| AGAAAGAGATAAGAGTTTAC+CGG | - | chr3_3:81581171-81581190 | None:intergenic | 30.0% | |
| !!! | CAGTTTTTTGGCTGATAATT+TGG | + | chr3_3:81581545-81581564 | Msa0477390:intron | 30.0% |
| GATTGAGATATATGAGAGAA+AGG | + | chr3_3:81581568-81581587 | Msa0477390:intron | 30.0% | |
| ACATATTGGAGAGTTAAAAG+AGG | + | chr3_3:81581637-81581656 | Msa0477390:intron | 30.0% | |
| CATATTGGAGAGTTAAAAGA+GGG | + | chr3_3:81581638-81581657 | Msa0477390:intron | 30.0% | |
| ATATTGGAGAGTTAAAAGAG+GGG | + | chr3_3:81581639-81581658 | Msa0477390:intron | 30.0% | |
| TTGAACGAAAACCTAAAGTA+GGG | + | chr3_3:81581682-81581701 | Msa0477390:intron | 30.0% | |
| GCTCACAAAAAATCTTCATA+AGG | - | chr3_3:81581721-81581740 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTGAGCAAAAGACT+TGG | + | chr3_3:81581729-81581748 | Msa0477390:intron | 30.0% |
| AGCAAGACAGCATTAAAAAA+AGG | - | chr3_3:81581818-81581837 | None:intergenic | 30.0% | |
| ACTATGAATTGAAGACATTG+GGG | - | chr3_3:81581859-81581878 | None:intergenic | 30.0% | |
| GTACTATGAATTGAAGACAT+TGG | - | chr3_3:81581861-81581880 | None:intergenic | 30.0% | |
| AGAAATGAAGACAAGATTCT+TGG | - | chr3_3:81581894-81581913 | None:intergenic | 30.0% | |
| AAAATAAACTTTCCCATGGT+GGG | - | chr3_3:81582033-81582052 | None:intergenic | 30.0% | |
| ! | TTAAAGTAATAGATGGTGGT+GGG | - | chr3_3:81582212-81582231 | None:intergenic | 30.0% |
| ! | TTTAAAGTAATAGATGGTGG+TGG | - | chr3_3:81582213-81582232 | None:intergenic | 30.0% |
| ! | AGGTTTAAAGTAATAGATGG+TGG | - | chr3_3:81582216-81582235 | None:intergenic | 30.0% |
| ! | ATAGTAAGTTGAAGAGAATG+AGG | - | chr3_3:81582236-81582255 | None:intergenic | 30.0% |
| TTGAAAAACCATGGTGTTTA+TGG | + | chr3_3:81582387-81582406 | Msa0477390:intron | 30.0% | |
| AATGGGAGAGAAATGATTAA+AGG | + | chr3_3:81582680-81582699 | Msa0477390:intron | 30.0% | |
| ATGGGAGAGAAATGATTAAA+GGG | + | chr3_3:81582681-81582700 | Msa0477390:intron | 30.0% | |
| ! | TATGAAGTTGTTTCAGTTGT+TGG | + | chr3_3:81582708-81582727 | Msa0477390:intron | 30.0% |
| CAAAATCACAACATGGATTT+GGG | - | chr3_3:81582747-81582766 | None:intergenic | 30.0% | |
| ATTGAAAATGAAGACCAAGA+TGG | + | chr3_3:81582778-81582797 | Msa0477390:intron | 30.0% | |
| TTATAGGTGGCATTTAACAT+GGG | - | chr3_3:81582951-81582970 | None:intergenic | 30.0% | |
| TTTATAGGTGGCATTTAACA+TGG | - | chr3_3:81582952-81582971 | None:intergenic | 30.0% | |
| ATATTTGTACGACTATAGCT+TGG | - | chr3_3:81583035-81583054 | None:intergenic | 30.0% | |
| ATTATATAACCATTCTCTCG+TGG | - | chr3_3:81583292-81583311 | None:intergenic | 30.0% | |
| !! | GCTTTAAAAAAAACAACGAC+CGG | - | chr3_3:81583696-81583715 | None:intergenic | 30.0% |
| !! | GCTTTAAAAAAAACAACGAC+CGG | - | chr3_3:81583696-81583715 | None:intergenic | 30.0% |
| GGATCAATTATTGTAATCGT+TGG | - | chr3_3:81584234-81584253 | None:intergenic | 30.0% | |
| TATAGAGACAGATTGTAAGA+CGG | + | chr3_3:81584670-81584689 | Msa0477390:intron | 30.0% | |
| ATCACTTCATCAAATCACAT+AGG | - | chr3_3:81584951-81584970 | None:intergenic | 30.0% | |
| AATGTCAAACTACATGTATG+AGG | - | chr3_3:81585274-81585293 | None:intergenic | 30.0% | |
| TTGGTTTATTAGCTGAAACT+GGG | - | chr3_3:81585329-81585348 | None:intergenic | 30.0% | |
| ! | TTTGGTTTATTAGCTGAAAC+TGG | - | chr3_3:81585330-81585349 | None:intergenic | 30.0% |
| TTTGACAGAAATACCTTCTA+TGG | - | chr3_3:81585464-81585483 | None:intergenic | 30.0% | |
| TGATATAATGATTCGTGACA+TGG | + | chr3_3:81585534-81585553 | Msa0477390:intron | 30.0% | |
| ! | CAGGTAACTAATCAATGTTT+TGG | + | chr3_3:81585636-81585655 | Msa0477390:intron | 30.0% |
| !! | TAGTTTCTGAAATTGTAGGT+AGG | + | chr3_3:81585671-81585690 | Msa0477390:intron | 30.0% |
| TGGGAGATCAAAATTCAAAT+GGG | - | chr3_3:81585783-81585802 | None:intergenic | 30.0% | |
| AAACTGATTGTTTAGTGATG+TGG | - | chr3_3:81586060-81586079 | None:intergenic | 30.0% | |
| TCAAGTGAAACCCTTAATTA+AGG | - | chr3_3:81586326-81586345 | None:intergenic | 30.0% | |
| CCACACATAATAATCTTTCA+TGG | - | chr3_3:81586553-81586572 | None:intergenic | 30.0% | |
| CCATGAAAGATTATTATGTG+TGG | + | chr3_3:81586550-81586569 | Msa0477390:three_prime_UTR | 30.0% | |
| GTGGTGAGAATAGAGAAAAT+GGG | - | chr3_3:81580991-81581010 | None:intergenic | 35.0% | |
| AGTGGTGAGAATAGAGAAAA+TGG | - | chr3_3:81580992-81581011 | None:intergenic | 35.0% | |
| TGAATCTCGATTACGAGTTT+CGG | + | chr3_3:81581076-81581095 | Msa0477390:CDS | 35.0% | |
| TAAAAGAGGGGAAGTGAAAA+AGG | + | chr3_3:81581651-81581670 | Msa0477390:intron | 35.0% | |
| GTTGAACGAAAACCTAAAGT+AGG | + | chr3_3:81581681-81581700 | Msa0477390:intron | 35.0% | |
| AAAACCTAAAGTAGGGATGT+GGG | + | chr3_3:81581689-81581708 | Msa0477390:intron | 35.0% | |
| TATGAATTGAAGACATTGGG+GGG | - | chr3_3:81581857-81581876 | None:intergenic | 35.0% | |
| CTATGAATTGAAGACATTGG+GGG | - | chr3_3:81581858-81581877 | None:intergenic | 35.0% | |
| TTCTTTGCATTCGGTTTACT+CGG | + | chr3_3:81581976-81581995 | Msa0477390:intron | 35.0% | |
| ! | TTACTCGGTGACATTTAACA+TGG | + | chr3_3:81581991-81582010 | Msa0477390:intron | 35.0% |
| ! | TACTCGGTGACATTTAACAT+GGG | + | chr3_3:81581992-81582011 | Msa0477390:intron | 35.0% |
| CAAAATAAACTTTCCCATGG+TGG | - | chr3_3:81582034-81582053 | None:intergenic | 35.0% | |
| GGTCAAAATAAACTTTCCCA+TGG | - | chr3_3:81582037-81582056 | None:intergenic | 35.0% | |
| ! | GTGGTCTTGATTTGATCTAA+AGG | - | chr3_3:81582058-81582077 | None:intergenic | 35.0% |
| !! | GAGAGAGTACTATAAGAATG+TGG | - | chr3_3:81582077-81582096 | None:intergenic | 35.0% |
| GTGAATATGGGGAAAAATAC+AGG | - | chr3_3:81582165-81582184 | None:intergenic | 35.0% | |
| AATGTGTTGTAGTTTCATGG+AGG | - | chr3_3:81582265-81582284 | None:intergenic | 35.0% | |
| GGAAATGTGTTGTAGTTTCA+TGG | - | chr3_3:81582268-81582287 | None:intergenic | 35.0% | |
| !! | GGTTTTTCAATTGCAACACA+TGG | - | chr3_3:81582377-81582396 | None:intergenic | 35.0% |
| GTGTTGCAATTGAAAAACCA+TGG | + | chr3_3:81582378-81582397 | Msa0477390:intron | 35.0% | |
| AACAAACATAAACAGAGGTC+AGG | - | chr3_3:81582465-81582484 | None:intergenic | 35.0% | |
| GCAAAATCACAACATGGATT+TGG | - | chr3_3:81582748-81582767 | None:intergenic | 35.0% | |
| AGAACAGCAAAATCACAACA+TGG | - | chr3_3:81582754-81582773 | None:intergenic | 35.0% | |
| AAAGATAAACTTTCCCATGG+TGG | + | chr3_3:81582909-81582928 | Msa0477390:intron | 35.0% | |
| AAGATAAACTTTCCCATGGT+GGG | + | chr3_3:81582910-81582929 | Msa0477390:intron | 35.0% | |
| TATAAATTCAAGCAGCCGTT+GGG | + | chr3_3:81582966-81582985 | Msa0477390:intron | 35.0% | |
| !! | GCAGACTCTTTTTCATTTGA+GGG | - | chr3_3:81583060-81583079 | None:intergenic | 35.0% |
| !! | AGCAGACTCTTTTTCATTTG+AGG | - | chr3_3:81583061-81583080 | None:intergenic | 35.0% |
| !! | CTCTCGTGGATCATTTTTAT+TGG | - | chr3_3:81583278-81583297 | None:intergenic | 35.0% |
| AAAAATGATCCACGAGAGAA+TGG | + | chr3_3:81583280-81583299 | Msa0477390:intron | 35.0% | |
| ! | TAGAGAAAGTTTTACACGGT+CGG | + | chr3_3:81584110-81584129 | Msa0477390:intron | 35.0% |
| CGAATGAATACTTCAAGACT+AGG | + | chr3_3:81584278-81584297 | Msa0477390:intron | 35.0% | |
| ! | TTTGAGACAATTTCTCATGC+AGG | + | chr3_3:81584587-81584606 | Msa0477390:intron | 35.0% |
| !! | GAATACTGATAGCGTGTTTT+TGG | - | chr3_3:81584620-81584639 | None:intergenic | 35.0% |
| TGAGCACATCATTTATGTAG+AGG | + | chr3_3:81584824-81584843 | Msa0477390:intron | 35.0% | |
| ACTTTGTAACATCCATGTGA+AGG | + | chr3_3:81584971-81584990 | Msa0477390:intron | 35.0% | |
| CTTTGTAACATCCATGTGAA+GGG | + | chr3_3:81584972-81584991 | Msa0477390:intron | 35.0% | |
| CATGAAAAGGTTACATAAGC+TGG | - | chr3_3:81585075-81585094 | None:intergenic | 35.0% | |
| CCTGCTATTCAATCATGAAA+AGG | - | chr3_3:81585088-81585107 | None:intergenic | 35.0% | |
| ! | CCTTTTCATGATTGAATAGC+AGG | + | chr3_3:81585085-81585104 | Msa0477390:intron | 35.0% |
| ! | GTGAGTTCATTTTCAACTTG+TGG | + | chr3_3:81585113-81585132 | Msa0477390:CDS | 35.0% |
| ! | AGTTCATTTTCAACTTGTGG+TGG | + | chr3_3:81585116-81585135 | Msa0477390:CDS | 35.0% |
| ! | ATGTTTGGGAGTGAAGTTTT+GGG | - | chr3_3:81585153-81585172 | None:intergenic | 35.0% |
| ! | AATGTTTGGGAGTGAAGTTT+TGG | - | chr3_3:81585154-81585173 | None:intergenic | 35.0% |
| ! | AGAATCAATAGTAGCACTGA+TGG | - | chr3_3:81585180-81585199 | None:intergenic | 35.0% |
| GATTCTCAGCCATCTATTTA+TGG | + | chr3_3:81585194-81585213 | Msa0477390:CDS | 35.0% | |
| ATACCAGTGCCATAAATAGA+TGG | - | chr3_3:81585206-81585225 | None:intergenic | 35.0% | |
| !! | ATTTATGGCACTGGTATGTA+TGG | + | chr3_3:81585209-81585228 | Msa0477390:intron | 35.0% |
| AATATCAAAGGGACATCAAG+TGG | + | chr3_3:81585363-81585382 | Msa0477390:CDS | 35.0% | |
| TTGATATGAAACGCCATAGA+AGG | + | chr3_3:81585448-81585467 | Msa0477390:CDS | 35.0% | |
| CTGGGAGATCAAAATTCAAA+TGG | - | chr3_3:81585784-81585803 | None:intergenic | 35.0% | |
| !! | CATTTGAATTTTGATCTCCC+AGG | + | chr3_3:81585782-81585801 | Msa0477390:intron | 35.0% |
| !! | CTACATCTGATTTTAGCACT+CGG | - | chr3_3:81585893-81585912 | None:intergenic | 35.0% |
| ATAATAGGTGAAGTTAGCTG+AGG | + | chr3_3:81586010-81586029 | Msa0477390:intron | 35.0% | |
| GGAAATAATAGTGCCTCATA+CGG | + | chr3_3:81586179-81586198 | Msa0477390:CDS | 35.0% | |
| GTATTGTATGACAAAGTGAG+AGG | - | chr3_3:81586516-81586535 | None:intergenic | 35.0% | |
| TTTCATGGCACTGTATTGAA+TGG | - | chr3_3:81586538-81586557 | None:intergenic | 35.0% | |
| AGAGATAAGAGTTTACCGGT+AGG | - | chr3_3:81581167-81581186 | None:intergenic | 40.0% | |
| GAGATATATGAGAGAAAGGG+AGG | + | chr3_3:81581572-81581591 | Msa0477390:intron | 40.0% | |
| ! | TATGAGAGAAAGGGAGGTAT+TGG | + | chr3_3:81581578-81581597 | Msa0477390:intron | 40.0% |
| GAAAACCTAAAGTAGGGATG+TGG | + | chr3_3:81581688-81581707 | Msa0477390:intron | 40.0% | |
| TAGTGTGAACGCATGACTTT+GGG | + | chr3_3:81581784-81581803 | Msa0477390:intron | 40.0% | |
| ! | AATGCTGTCTTGCTCTCTTT+TGG | + | chr3_3:81581824-81581843 | Msa0477390:intron | 40.0% |
| ! | AGCCTAAAATTTTCCCACCA+TGG | + | chr3_3:81582017-81582036 | Msa0477390:intron | 40.0% |
| ! | GCCTAAAATTTTCCCACCAT+GGG | + | chr3_3:81582018-81582037 | Msa0477390:intron | 40.0% |
| !! | TCCCATGGTGGGAAAATTTT+AGG | - | chr3_3:81582022-81582041 | None:intergenic | 40.0% |
| ATGAAGAACGAAGGAGAGAA+CGG | - | chr3_3:81582132-81582151 | None:intergenic | 40.0% | |
| CATAAACAGAGGTCAGGATT+GGG | - | chr3_3:81582459-81582478 | None:intergenic | 40.0% | |
| ACATAAACAGAGGTCAGGAT+TGG | - | chr3_3:81582460-81582479 | None:intergenic | 40.0% | |
| ATTCCTTCATCTCTCCATCT+TGG | - | chr3_3:81582795-81582814 | None:intergenic | 40.0% | |
| GATGGAGAGATGAAGGAATA+CGG | + | chr3_3:81582796-81582815 | Msa0477390:intron | 40.0% | |
| GGCAAAGATAAACTTTCCCA+TGG | + | chr3_3:81582906-81582925 | Msa0477390:intron | 40.0% | |
| ! | GTCTAAAATCTTCCCACCAT+GGG | - | chr3_3:81582925-81582944 | None:intergenic | 40.0% |
| ! | AGTCTAAAATCTTCCCACCA+TGG | - | chr3_3:81582926-81582945 | None:intergenic | 40.0% |
| CAACGGCTGCTTGAATTTAT+AGG | - | chr3_3:81582967-81582986 | None:intergenic | 40.0% | |
| CTATAAATTCAAGCAGCCGT+TGG | + | chr3_3:81582965-81582984 | Msa0477390:intron | 40.0% | |
| ATAAATTCAAGCAGCCGTTG+GGG | + | chr3_3:81582967-81582986 | Msa0477390:intron | 40.0% | |
| AATGCACTCCTAACGTAAAC+CGG | + | chr3_3:81583674-81583693 | Msa0477390:intron | 40.0% | |
| AATGCACTCCTAACGTAAAC+CGG | + | chr3_3:81583674-81583693 | Msa0477390:intron | 40.0% | |
| !!! | CTCTGTTTTTACCCTTCACA+TGG | - | chr3_3:81584986-81585005 | None:intergenic | 40.0% |
| !! | ATCAATAGTAGCACTGATGG+TGG | - | chr3_3:81585177-81585196 | None:intergenic | 40.0% |
| TGAGGAATGTTGAGATGTGT+AGG | - | chr3_3:81585256-81585275 | None:intergenic | 40.0% | |
| TGAATTGCATATGGAGCAGT+TGG | + | chr3_3:81585300-81585319 | Msa0477390:intron | 40.0% | |
| ACCTGATTCATTATCCTCGT+CGG | - | chr3_3:81585403-81585422 | None:intergenic | 40.0% | |
| ATTCGTGACATGGTTTCAGA+AGG | + | chr3_3:81585544-81585563 | Msa0477390:intron | 40.0% | |
| TTCGTGACATGGTTTCAGAA+GGG | + | chr3_3:81585545-81585564 | Msa0477390:intron | 40.0% | |
| TTTGTCTGAACTTGAGTCTC+AGG | + | chr3_3:81585617-81585636 | Msa0477390:CDS | 40.0% | |
| !! | CAGTTGCAGTTTTTCAACCT+GGG | - | chr3_3:81585802-81585821 | None:intergenic | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | chr3_3:81585908-81585927 | Msa0477390:CDS | 40.0% |
| AATAATAGTGCCTCATACGG+TGG | + | chr3_3:81586182-81586201 | Msa0477390:CDS | 40.0% | |
| TGCACAATTCGAATCTTGCT+GGG | + | chr3_3:81586219-81586238 | Msa0477390:CDS | 40.0% | |
| AATTCGAATCTTGCTGGGTT+TGG | + | chr3_3:81586224-81586243 | Msa0477390:CDS | 40.0% | |
| TTGTCGACGACATCATTGTA+AGG | - | chr3_3:81586263-81586282 | None:intergenic | 40.0% | |
| TACAATGATGTCGTCGACAA+TGG | + | chr3_3:81586263-81586282 | Msa0477390:CDS | 40.0% | |
| ACAATGATGTCGTCGACAAT+GGG | + | chr3_3:81586264-81586283 | Msa0477390:CDS | 40.0% | |
| CACAACTCATAGCATTGCTT+AGG | - | chr3_3:81586292-81586311 | None:intergenic | 40.0% | |
| GTATCCAAGTCTTGCCGATA+CGG | + | chr3_3:81581098-81581117 | Msa0477390:CDS | 45.0% | |
| AGTTTACCGGTAGGAGAGTT+TGG | - | chr3_3:81581158-81581177 | None:intergenic | 45.0% | |
| TCGCTCAACGCTTACTTAAC+CGG | + | chr3_3:81581293-81581312 | Msa0477390:intron | 45.0% | |
| CTAGTGTGAACGCATGACTT+TGG | + | chr3_3:81581783-81581802 | Msa0477390:intron | 45.0% | |
| AGTGTGAACGCATGACTTTG+GGG | + | chr3_3:81581785-81581804 | Msa0477390:intron | 45.0% | |
| !!! | GTCTTGCTCTCTTTTGGAGT+TGG | + | chr3_3:81581830-81581849 | Msa0477390:intron | 45.0% |
| ! | GAAGACAAGATTCTTGGTGC+TGG | - | chr3_3:81581888-81581907 | None:intergenic | 45.0% |
| TGTGGGTTCCATAAACACCA+TGG | - | chr3_3:81582398-81582417 | None:intergenic | 45.0% | |
| AGACCAAGATGGAGAGATGA+AGG | + | chr3_3:81582789-81582808 | Msa0477390:intron | 45.0% | |
| ATGAAGGAATACGGTGGTTG+TGG | + | chr3_3:81582805-81582824 | Msa0477390:intron | 45.0% | |
| GTGGTGAGTGTAGAAGAGAA+TGG | + | chr3_3:81582824-81582843 | Msa0477390:intron | 45.0% | |
| GTGAGTGTAGAAGAGAATGG+TGG | + | chr3_3:81582827-81582846 | Msa0477390:intron | 45.0% | |
| AGTGTAGAAGAGAATGGTGG+TGG | + | chr3_3:81582830-81582849 | Msa0477390:intron | 45.0% | |
| !! | TGGTGGTGGATGATATAGTG+TGG | + | chr3_3:81582844-81582863 | Msa0477390:intron | 45.0% |
| CGGCTGCTTGAATTTATAGG+TGG | - | chr3_3:81582964-81582983 | None:intergenic | 45.0% | |
| TAAGTTCCACCAATCCCCAA+CGG | - | chr3_3:81582984-81583003 | None:intergenic | 45.0% | |
| ! | AACAACGACCGGTTTACGTT+AGG | - | chr3_3:81583685-81583704 | None:intergenic | 45.0% |
| ! | AACAACGACCGGTTTACGTT+AGG | - | chr3_3:81583685-81583704 | None:intergenic | 45.0% |
| GAGACAATTTCTCATGCAGG+AGG | + | chr3_3:81584590-81584609 | Msa0477390:intron | 45.0% | |
| !! | GCACTGATGGTGGAATGTTT+GGG | - | chr3_3:81585167-81585186 | None:intergenic | 45.0% |
| !! | AGCACTGATGGTGGAATGTT+TGG | - | chr3_3:81585168-81585187 | None:intergenic | 45.0% |
| CAGCCATCTATTTATGGCAC+TGG | + | chr3_3:81585200-81585219 | Msa0477390:CDS | 45.0% | |
| GATTCATTATCCTCGTCGGA+TGG | - | chr3_3:81585399-81585418 | None:intergenic | 45.0% | |
| TCCGACGAGGATAATGAATC+AGG | + | chr3_3:81585399-81585418 | Msa0477390:CDS | 45.0% | |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | chr3_3:81585589-81585608 | None:intergenic | 45.0% |
| !! | CCAGTTGCAGTTTTTCAACC+TGG | - | chr3_3:81585803-81585822 | None:intergenic | 45.0% |
| ! | CCAGGTTGAAAAACTGCAAC+TGG | + | chr3_3:81585800-81585819 | Msa0477390:intron | 45.0% |
| GGTGAAGTTAGCTGAGGATA+TGG | + | chr3_3:81586016-81586035 | Msa0477390:intron | 45.0% | |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | chr3_3:81586113-81586132 | None:intergenic | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | chr3_3:81586149-81586168 | None:intergenic | 45.0% |
| ATTTCCCTGCAGGACATTGA+TGG | - | chr3_3:81586165-81586184 | None:intergenic | 45.0% | |
| AGGCACTATTATTTCCCTGC+AGG | - | chr3_3:81586175-81586194 | None:intergenic | 45.0% | |
| GTGCACAATTCGAATCTTGC+TGG | + | chr3_3:81586218-81586237 | Msa0477390:CDS | 45.0% | |
| TCTTGCTGGGTTTGGAAACT+TGG | + | chr3_3:81586232-81586251 | Msa0477390:CDS | 45.0% | |
| CAATGATGTCGTCGACAATG+GGG | + | chr3_3:81586265-81586284 | Msa0477390:CDS | 45.0% | |
| !!! | ATTTTTACTTATATATAATT+TGG | - | chr3_3:81581478-81581497 | None:intergenic | 5.0% |
| !!! | AAATATGTTAATTTTTTTTT+AGG | - | chr3_3:81583335-81583354 | None:intergenic | 5.0% |
| GGTCATGAATGCCTCCGTAT+CGG | - | chr3_3:81581115-81581134 | None:intergenic | 50.0% | |
| !! | GATACGGAGGCATTCATGAC+CGG | + | chr3_3:81581114-81581133 | Msa0477390:CDS | 50.0% |
| CGGTAGGAGAGTTTGGAAAG+CGG | - | chr3_3:81581151-81581170 | None:intergenic | 50.0% | |
| CGCTTTCCAAACTCTCCTAC+CGG | + | chr3_3:81581149-81581168 | Msa0477390:CDS | 50.0% | |
| !! | TTTTGCCACGTCTGATGACG+TGG | + | chr3_3:81581243-81581262 | Msa0477390:intron | 50.0% |
| CCTCACACAAACTGCATGGT+AGG | - | chr3_3:81581272-81581291 | None:intergenic | 50.0% | |
| CCTACCATGCAGTTTGTGTG+AGG | + | chr3_3:81581269-81581288 | Msa0477390:intron | 50.0% | |
| CGATCCTCACACAAACTGCA+TGG | - | chr3_3:81581276-81581295 | None:intergenic | 50.0% | |
| GCAACCCACATCCCTACTTT+AGG | - | chr3_3:81581696-81581715 | None:intergenic | 50.0% | |
| GTGTGAACGCATGACTTTGG+GGG | + | chr3_3:81581786-81581805 | Msa0477390:intron | 50.0% | |
| AAGAACGAAGGAGAGAACGG+TGG | - | chr3_3:81582129-81582148 | None:intergenic | 50.0% | |
| GGAGAGATGAAGGAATACGG+TGG | + | chr3_3:81582799-81582818 | Msa0477390:intron | 50.0% | |
| ATGAAGGGGGAGAGATAGAG+AGG | + | chr3_3:81583377-81583396 | Msa0477390:intron | 50.0% | |
| GATAGAGAGGAGGGATTGTG+AGG | + | chr3_3:81583390-81583409 | Msa0477390:intron | 50.0% | |
| AGAGGAGGGATTGTGAGGTA+GGG | + | chr3_3:81583395-81583414 | Msa0477390:intron | 50.0% | |
| GATTGTGAGGTAGGGAGAGA+GGG | + | chr3_3:81583403-81583422 | Msa0477390:intron | 50.0% | |
| ATTGTGAGGTAGGGAGAGAG+GGG | + | chr3_3:81583404-81583423 | Msa0477390:intron | 50.0% | |
| TTCATCTGATCCATCCGACG+AGG | + | chr3_3:81585386-81585405 | Msa0477390:CDS | 50.0% | |
| CTAATTGCGAGTCAGCCAAG+AGG | + | chr3_3:81585571-81585590 | Msa0477390:CDS | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | chr3_3:81586142-81586161 | None:intergenic | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | chr3_3:81586158-81586177 | Msa0477390:CDS | 50.0% | |
| TCCAAGTCTTGCCGATACGG+AGG | + | chr3_3:81581101-81581120 | Msa0477390:CDS | 55.0% | |
| GAAAGCGGCAGAGCAAACTC+CGG | - | chr3_3:81581136-81581155 | None:intergenic | 55.0% | |
| GGATTCCACGTCATCAGACG+TGG | - | chr3_3:81581251-81581270 | None:intergenic | 55.0% | |
| ! | AACGCATGACTTTGGGGGTG+TGG | + | chr3_3:81581791-81581810 | Msa0477390:intron | 55.0% |
| ! | ACGCATGACTTTGGGGGTGT+GGG | + | chr3_3:81581792-81581811 | Msa0477390:intron | 55.0% |
| TTCAAGCAGCCGTTGGGGAT+TGG | + | chr3_3:81582972-81582991 | Msa0477390:intron | 55.0% | |
| AAGGGGGAGAGATAGAGAGG+AGG | + | chr3_3:81583380-81583399 | Msa0477390:intron | 55.0% | |
| AGGGGGAGAGATAGAGAGGA+GGG | + | chr3_3:81583381-81583400 | Msa0477390:intron | 55.0% | |
| GAGAGGAGGGATTGTGAGGT+AGG | + | chr3_3:81583394-81583413 | Msa0477390:intron | 55.0% | |
| GGATTGTGAGGTAGGGAGAG+AGG | + | chr3_3:81583402-81583421 | Msa0477390:intron | 55.0% | |
| TTGTGAGGTAGGGAGAGAGG+GGG | + | chr3_3:81583405-81583424 | Msa0477390:intron | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | chr3_3:81585580-81585599 | Msa0477390:CDS | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | chr3_3:81586132-81586151 | None:intergenic | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | chr3_3:81586157-81586176 | Msa0477390:CDS | 55.0% | |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | chr3_3:81586161-81586180 | None:intergenic | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | chr3_3:81586190-81586209 | Msa0477390:CDS | 55.0% |
| AACCGCAACACCACCGTATG+AGG | - | chr3_3:81586195-81586214 | None:intergenic | 55.0% | |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | chr3_3:81586194-81586213 | Msa0477390:CDS | 55.0% |
| ! | GCCTCCGTATCGGCAAGACT+TGG | - | chr3_3:81581105-81581124 | None:intergenic | 60.0% |
| CGAAGGAGAGAACGGTGGTG+TGG | - | chr3_3:81582124-81582143 | None:intergenic | 60.0% | |
| AAGCAGCCGTTGGGGATTGG+TGG | + | chr3_3:81582975-81582994 | Msa0477390:intron | 60.0% | |
| GCGAGTCAGCCAAGAGGTCA+AGG | + | chr3_3:81585577-81585596 | Msa0477390:CDS | 60.0% | |
| CTCTCTTCTCCGGCGAGCGA+TGG | + | chr3_3:81581023-81581042 | Msa0477390:exon | 65.0% | |
| CCGTTGTTGCCATCGCTCGC+CGG | - | chr3_3:81581035-81581054 | None:intergenic | 65.0% | |
| CCGGCGAGCGATGGCAACAA+CGG | + | chr3_3:81581032-81581051 | Msa0477390:exon | 65.0% | |
| TGAGGTAGGGAGAGAGGGGG+AGG | + | chr3_3:81583408-81583427 | Msa0477390:intron | 65.0% | |
| GAGGTAGGGAGAGAGGGGGA+GGG | + | chr3_3:81583409-81583428 | Msa0477390:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 81580981 | 81586588 | 81580981 | ID=Msa0477390;Name=Msa0477390 |
| chr3_3 | mRNA | 81580981 | 81586588 | 81580981 | ID=Msa0477390-mRNA-1;Parent=Msa0477390;Name=Msa0477390-mRNA-1;_AED=0.11;_eAED=0.11;_QI=61|1|1|1|1|1|6|260|302 |
| chr3_3 | exon | 81580981 | 81581170 | 81580981 | ID=Msa0477390-mRNA-1:exon:22513;Parent=Msa0477390-mRNA-1 |
| chr3_3 | exon | 81585107 | 81585221 | 81585107 | ID=Msa0477390-mRNA-1:exon:22514;Parent=Msa0477390-mRNA-1 |
| chr3_3 | exon | 81585319 | 81585469 | 81585319 | ID=Msa0477390-mRNA-1:exon:22515;Parent=Msa0477390-mRNA-1 |
| chr3_3 | exon | 81585563 | 81585638 | 81585563 | ID=Msa0477390-mRNA-1:exon:22516;Parent=Msa0477390-mRNA-1 |
| chr3_3 | exon | 81585804 | 81585929 | 81585804 | ID=Msa0477390-mRNA-1:exon:22517;Parent=Msa0477390-mRNA-1 |
| chr3_3 | exon | 81586017 | 81586588 | 81586017 | ID=Msa0477390-mRNA-1:exon:22518;Parent=Msa0477390-mRNA-1 |
| chr3_3 | five_prime_UTR | 81580981 | 81581041 | 81580981 | ID=Msa0477390-mRNA-1:five_prime_utr;Parent=Msa0477390-mRNA-1 |
| chr3_3 | CDS | 81581042 | 81581170 | 81581042 | ID=Msa0477390-mRNA-1:cds;Parent=Msa0477390-mRNA-1 |
| chr3_3 | CDS | 81585107 | 81585221 | 81585107 | ID=Msa0477390-mRNA-1:cds;Parent=Msa0477390-mRNA-1 |
| chr3_3 | CDS | 81585319 | 81585469 | 81585319 | ID=Msa0477390-mRNA-1:cds;Parent=Msa0477390-mRNA-1 |
| chr3_3 | CDS | 81585563 | 81585638 | 81585563 | ID=Msa0477390-mRNA-1:cds;Parent=Msa0477390-mRNA-1 |
| chr3_3 | CDS | 81585804 | 81585929 | 81585804 | ID=Msa0477390-mRNA-1:cds;Parent=Msa0477390-mRNA-1 |
| chr3_3 | CDS | 81586017 | 81586328 | 81586017 | ID=Msa0477390-mRNA-1:cds;Parent=Msa0477390-mRNA-1 |
| chr3_3 | three_prime_UTR | 81586329 | 81586588 | 81586329 | ID=Msa0477390-mRNA-1:three_prime_utr;Parent=Msa0477390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
