AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0286940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286940 MtrunA17_Chr8g0382131 95.609 1708 69 3 1 1708 1 1702 0.0 3326
Msa0286940 MtrunA17_Chr3g0079151 74.035 1710 435 7 3 1708 5 1709 0.0 2576
Msa0286940 MtrunA17_Chr8g0338441 74.182 1712 428 8 1 1708 1 1702 0.0 2573
Msa0286940 MtrunA17_Chr8g0338311 71.911 1716 457 11 1 1708 4 1702 0.0 2476
Msa0286940 MtrunA17_Chr8g0338331 69.221 1657 493 9 54 1707 13 1655 0.0 2305
Msa0286940 MtrunA17_Chr2g0311121 90.745 940 83 1 768 1707 648 1583 0.0 1769
Msa0286940 MtrunA17_Chr2g0311121 92.575 633 44 2 1 632 1 631 0.0 1197
Msa0286940 MtrunA17_Chr6g0454611 65.122 777 212 9 330 1096 1 728 0.0 976
Msa0286940 MtrunA17_Chr6g0454611 48.006 727 318 12 999 1706 395 1080 0.0 621
Msa0286940 MtrunA17_Chr8g0338301 89.015 528 57 1 49 575 1 528 0.0 962
Msa0286940 MtrunA17_Chr8g0338291 60.941 489 137 3 888 1341 71 540 0.0 599
Msa0286940 MtrunA17_Chr8g0338291 47.602 563 226 11 701 1223 1 534 1.12e-146 462
Msa0286940 MtrunA17_Chr8g0338281 75.556 225 51 2 1320 1544 9 229 3.82e-110 349
Msa0286940 MtrunA17_Chr6g0454601 75.431 232 55 2 49 279 1 231 1.89e-104 333
Msa0286940 MtrunA17_Chr8g0338271 84.058 138 21 1 1572 1708 1 138 5.88e-73 239
Msa0286940 MtrunA17_Chr8g0378271 30.901 466 247 18 8 445 1144 1562 1.21e-43 175
Msa0286940 MtrunA17_Chr8g0338341 72.222 54 14 1 1 53 4 57 2.30e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286940 AT3G48770.1 50.261 1723 815 22 3 1705 195 1895 0.0 1683
Msa0286940 AT3G48770.2 50.261 1723 815 22 3 1705 195 1895 0.0 1683
Msa0286940 AT3G28020.1 41.481 270 95 7 155 423 36 243 9.16e-52 183
Msa0286940 AT4G13750.1 32.908 392 198 16 8 376 1162 1511 9.09e-37 153

Find 371 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTATAATCATGCACTTTA+TGG 0.050342 2_3:-28845106 Msa0286940:three_prime_UTR
TAACTGGTCTTCAAGATTTA+AGG 0.093581 2_3:-28848980 Msa0286940:CDS
CGATTACATTGAATTCTTTC+TGG 0.117748 2_3:+28846652 None:intergenic
ATCGGCGTGGTTGTTGATTT+TGG 0.135945 2_3:-28847314 Msa0286940:CDS
CTTAAAATCACCCTCAAATT+TGG 0.153756 2_3:-28847588 Msa0286940:CDS
TGGTTTCAAGAGTGTGTTTC+TGG 0.176004 2_3:-28850180 Msa0286940:CDS
ATAAAGCTGCCAAGAAAATT+TGG 0.198820 2_3:-28846406 Msa0286940:CDS
TGGCTTAAAGTTTCCGTTAA+TGG 0.213641 2_3:-28848139 Msa0286940:CDS
TCTTTGCTTCCTGTTGTTAC+AGG 0.221014 2_3:+28846071 None:intergenic
CTCATTGATGAGAGCTTCTA+TGG 0.223705 2_3:-28848031 Msa0286940:CDS
TATTTGTGCCCAAATGTTTC+AGG 0.227165 2_3:+28846129 None:intergenic
GCCCATTTGCTCACATTTGC+AGG 0.230967 2_3:+28848463 None:intergenic
GGCTTCTCCTCAACCCATTC+AGG 0.234048 2_3:+28850068 None:intergenic
AAGTAAGCTTGATCAATAAA+AGG 0.238617 2_3:+28847701 None:intergenic
TGTCATTTCTTTCATGTTGC+AGG 0.239049 2_3:-28847217 Msa0286940:CDS
TGCTTGTTCTAGCCTGAAAA+TGG 0.240607 2_3:-28845760 Msa0286940:CDS
AAGATCCTTGGTGTTGTTAC+TGG 0.241657 2_3:-28846975 Msa0286940:CDS
CTTGAAAGCTGCTGTTTAAC+AGG 0.244379 2_3:+28849954 None:intergenic
CCTGCGGCTCATCCAACTTC+TGG 0.244674 2_3:+28845568 None:intergenic
ATCAACATATGCTCAGAATT+TGG 0.246034 2_3:-28845035 Msa0286940:three_prime_UTR
GAAAGAGATTGTCCAGAAAT+TGG 0.251652 2_3:-28846806 Msa0286940:CDS
CCAGACGTGGGGCTGTATTT+TGG 0.253639 2_3:-28847417 Msa0286940:CDS
ATGCCACTTGTTGACAACTA+TGG 0.253963 2_3:-28848520 Msa0286940:CDS
ATGTGTTCCATCGGCCTTTA+TGG 0.256561 2_3:-28849466 Msa0286940:CDS
TCTTATGCAGGCCAATTTAC+AGG 0.257247 2_3:-28848367 Msa0286940:CDS
CTATGAAGCCTCTCCTGATT+TGG 0.260100 2_3:+28849633 None:intergenic
GGTTGACCTTATCCGGCTTC+AGG 0.268870 2_3:+28849976 None:intergenic
TTAAGTGCTTGATAACAATT+TGG 0.270152 2_3:+28847606 None:intergenic
CAATTCTCTTGGATAATAAA+TGG 0.271572 2_3:-28849506 Msa0286940:CDS
GCAGGCCAATTTACAGGTTC+CGG 0.271998 2_3:-28848361 Msa0286940:CDS
TTGATGATTATGTTGATCTT+TGG 0.277427 2_3:-28846217 Msa0286940:CDS
GAAGGGAAATTAAGACATTT+AGG 0.279343 2_3:+28846927 None:intergenic
TATTGTTTGTTGCTAATAAC+TGG 0.287734 2_3:-28848996 Msa0286940:CDS
CCATATAAAATGCATTGTTT+TGG 0.288662 2_3:+28847098 None:intergenic
CTGCATAAGATGAGGAATTT+AGG 0.289962 2_3:+28848380 None:intergenic
ATTTCTTCAACATGCTCTTT+TGG 0.293568 2_3:+28851533 None:intergenic
ATGTGTCTTCAACCAATTTC+TGG 0.298209 2_3:+28846794 None:intergenic
GCTCCTATTGCCTTTCTTTG+TGG 0.300947 2_3:+28850474 None:intergenic
TTCTTCAGATGAAGGTTATC+AGG 0.305500 2_3:+28846014 None:intergenic
GATGTTTATCCTGAAACATT+TGG 0.311080 2_3:-28846138 Msa0286940:CDS
GCTTCCCGGAACCTGTAAAT+TGG 0.312199 2_3:+28848356 None:intergenic
CTCAAATGGCGAACTTTCAA+TGG 0.313505 2_3:+28849368 None:intergenic
TTCTTAATTCGCTCGCCATT+GGG 0.317250 2_3:-28848094 Msa0286940:CDS
GTGATTGATCATAAATTCTA+TGG 0.318339 2_3:-28847374 Msa0286940:CDS
GAAGACTTCTCCTGAGATAT+TGG 0.326955 2_3:+28847855 None:intergenic
GTAGGCTGCTGTCTGAATTC+TGG 0.327095 2_3:-28849236 Msa0286940:CDS
CAGAAAGAATTCAATGTAAT+CGG 0.330687 2_3:-28846651 Msa0286940:CDS
AACTGGTCTTCAAGATTTAA+GGG 0.333106 2_3:-28848979 Msa0286940:CDS
ATTCCATCAAAGTCTGCTTC+TGG 0.333193 2_3:+28848716 None:intergenic
TGAAGACACATGCTGGTTAT+AGG 0.336295 2_3:-28846782 Msa0286940:CDS
CATGTGGAAGCAAAAGTTTC+CGG 0.342746 2_3:-28849721 Msa0286940:CDS
CAAATCAGGAGAGGCTTCAT+AGG 0.348815 2_3:-28849632 Msa0286940:CDS
TTAACAGGGTTGACCTTATC+CGG 0.359006 2_3:+28849969 None:intergenic
AAAGGATGCTCCTTGCTTGC+AGG 0.359775 2_3:-28846609 Msa0286940:CDS
GAGAAAATTAATAAGCTTCC+CGG 0.361538 2_3:+28848342 None:intergenic
CTTGTTCATGGCTGATCAAT+TGG 0.362922 2_3:-28848819 Msa0286940:CDS
GTAAGAAACAAAAGGACTTC+GGG 0.368051 2_3:+28849924 None:intergenic
TATGAAGCCTCTCCTGATTT+GGG 0.372971 2_3:+28849634 None:intergenic
ATGTTTATCCTGAAACATTT+GGG 0.373249 2_3:-28846137 Msa0286940:CDS
CTTATATCTCCTCCAAATGC+TGG 0.374935 2_3:-28848289 Msa0286940:CDS
GAAGAGGAGTTGAAAACAAT+TGG 0.375017 2_3:-28847989 Msa0286940:CDS
AATGGAATGCATCAAATTCT+TGG 0.376882 2_3:-28847534 Msa0286940:CDS
TCAAGCTCCGGTATCAAGTT+TGG 0.377622 2_3:-28849412 Msa0286940:CDS
TACAAAGAAAGATGACAAAA+TGG 0.378234 2_3:-28845625 Msa0286940:CDS
AATCCAATCCAAAAGCAAAA+AGG 0.378620 2_3:+28848228 None:intergenic
CCTTGTCCACATTGCAGTCT+TGG 0.379743 2_3:-28850101 Msa0286940:CDS
ACAGCTTCATGCCTCTTGTC+TGG 0.379764 2_3:+28845735 None:intergenic
GGTATCCTCAGCAGGACTTT+GGG 0.382002 2_3:-28845962 Msa0286940:CDS
CCACTTCTGATTATGTATAA+TGG 0.385042 2_3:+28847151 None:intergenic
GCTGACATAAAGCAGATATA+TGG 0.385390 2_3:-28850038 Msa0286940:CDS
ACTTGATTGTTTCTAATCCT+TGG 0.387536 2_3:-28848438 Msa0286940:CDS
AGCAAAGAAAACACACTTTC+AGG 0.390400 2_3:+28846885 None:intergenic
ATGACAAGTGCTGGAAATTC+TGG 0.393370 2_3:-28846160 Msa0286940:CDS
TTTACATGCTTCCTCACAAC+TGG 0.393777 2_3:+28847958 None:intergenic
ACAGCTGAAAACCCAGCATT+TGG 0.395599 2_3:+28848277 None:intergenic
GAGGAAGCATGTAAATTCAT+TGG 0.395863 2_3:-28847950 Msa0286940:CDS
GTTCTTAATTCGCTCGCCAT+TGG 0.396110 2_3:-28848095 Msa0286940:CDS
CAGGCCAATTTACAGGTTCC+GGG 0.401530 2_3:-28848360 Msa0286940:CDS
GTCAGTCTAATGCTTGTTCA+TGG 0.403294 2_3:-28848831 Msa0286940:CDS
CTTGTCCACATTGCAGTCTT+GGG 0.403552 2_3:-28850100 Msa0286940:CDS
GGATCTGTATTGAATGATTC+CGG 0.406210 2_3:-28847755 Msa0286940:CDS
TATAGTCTATCACTGTCATC+AGG 0.408350 2_3:-28845657 Msa0286940:CDS
TTCTTGGCAGCTTTATCCTC+AGG 0.409894 2_3:+28846413 None:intergenic
AGATCCTCAGTCAAAGGATT+AGG 0.411396 2_3:+28851479 None:intergenic
TTCATGTTGCAGGCTGCTGA+AGG 0.412366 2_3:-28847207 Msa0286940:CDS
GGTTTGATTAAGCTGATTCT+CGG 0.412424 2_3:-28845789 Msa0286940:CDS
ATGTTGATCTTTGGAATGAA+TGG 0.413066 2_3:-28846208 Msa0286940:CDS
CTATCTGAATTGATCACGTT+GGG 0.414492 2_3:-28845462 Msa0286940:CDS
ATAAGCCTGGTGACGTTAGT+AGG 0.416281 2_3:-28849254 Msa0286940:CDS
GGCTATCTTGAGATTGAGAT+TGG 0.416669 2_3:-28848740 Msa0286940:CDS
GCATTCAAAACACTTGTTGT+AGG 0.419093 2_3:-28849441 Msa0286940:CDS
TTTATTGATCAAGCTTACTT+TGG 0.422780 2_3:-28847698 Msa0286940:CDS
GAATGAATGGGAGAGTTCAT+TGG 0.422978 2_3:-28846195 Msa0286940:CDS
CCAACGTGATCAATTCAGAT+AGG 0.423386 2_3:+28845463 None:intergenic
TGGTATCCTCAGCAGGACTT+TGG 0.423557 2_3:-28845963 Msa0286940:CDS
TTCCATCAAAGTCTGCTTCT+GGG 0.425936 2_3:+28848717 None:intergenic
GTTGACCTTATCCGGCTTCA+GGG 0.430179 2_3:+28849977 None:intergenic
GACACTGGCCTTCCCAAATC+AGG 0.433616 2_3:-28849646 Msa0286940:CDS
GGATCTTCCAACACTGCATA+TGG 0.433973 2_3:+28850495 None:intergenic
TGGGTATATAGTTCCTGAAT+GGG 0.434524 2_3:-28850081 Msa0286940:CDS
GATGTCATATAACTTAGAAA+TGG 0.434906 2_3:+28845932 None:intergenic
TGCTTTATGTCAGCAAGGGT+TGG 0.437214 2_3:+28850047 None:intergenic
CTTAACCTATCTTCTCATGA+TGG 0.437612 2_3:-28849174 Msa0286940:CDS
GGTACTTGTCTGAATACAAC+TGG 0.439001 2_3:-28846439 Msa0286940:CDS
CGAATTAAGAACGACTTTGA+AGG 0.439260 2_3:+28848106 None:intergenic
TTGGGTATATAGTTCCTGAA+TGG 0.439800 2_3:-28850082 Msa0286940:CDS
CAATGAGGAGCTGAAGTTGT+TGG 0.439958 2_3:-28847657 Msa0286940:CDS
GGCCCAGAAGCAGACTTTGA+TGG 0.440259 2_3:-28848719 Msa0286940:CDS
TAAAATCTTAAATTCATTGA+AGG 0.442200 2_3:-28847501 Msa0286940:CDS
GCTTCACTCCCTCATTATAG+TGG 0.448123 2_3:+28850626 None:intergenic
CTTTCTGAACTCATCATCAA+TGG 0.449609 2_3:+28846824 None:intergenic
CGAAGGACAAAGTTCTCTAT+TGG 0.451136 2_3:-28851509 Msa0286940:CDS
TCTTTCTTTAATCCAACTGA+TGG 0.451371 2_3:-28846720 Msa0286940:CDS
AATGAGGAGCTGAAGTTGTT+GGG 0.451772 2_3:-28847656 Msa0286940:CDS
TGCCTGCAAATGTGAGCAAA+TGG 0.454255 2_3:-28848465 Msa0286940:CDS
CCTTTGCCTCAATGAAGCTC+AGG 0.457360 2_3:+28845697 None:intergenic
CTGTCCACCTTCAGTGCCAT+TGG 0.458222 2_3:+28846379 None:intergenic
CATAGGGGTAAAAGCTCACC+AGG 0.459073 2_3:-28849615 Msa0286940:CDS
CTTGCCCCTGAAGCCGGATA+AGG 0.460248 2_3:-28849982 Msa0286940:CDS
AAAAGATGTCCATTTCCTAA+TGG 0.461206 2_3:-28851417 Msa0286940:CDS
TCCTTTCTTTACCTTTGCCA+TGG 0.464347 2_3:-28846261 Msa0286940:CDS
TAACCATTCTTCTTCACAGC+TGG 0.465584 2_3:-28851591 Msa0286940:five_prime_UTR
GAGAACAGATGTTGAAGAAT+GGG 0.466265 2_3:-28849673 Msa0286940:CDS
ATACTTGTATGAGCTCCATT+AGG 0.468725 2_3:+28851402 None:intergenic
TTAAACTAGTGACCGTTGAT+TGG 0.468862 2_3:-28849086 Msa0286940:CDS
TTAGCAATGGATATCAGATA+AGG 0.469431 2_3:-28850136 Msa0286940:CDS
AGACTATAGTTAACCGTGAC+CGG 0.469581 2_3:+28845672 None:intergenic
TTTCAGTTAGAGAAGATCAA+TGG 0.471537 2_3:-28851561 Msa0286940:exon
TAAATTACATTCCAGAACTT+AGG 0.471844 2_3:-28844991 Msa0286940:three_prime_UTR
AAGTTGTTGGGAGTGGTAGT+TGG 0.472898 2_3:-28847644 Msa0286940:CDS
GGAGAACAGATGTTGAAGAA+TGG 0.473141 2_3:-28849674 Msa0286940:CDS
TTGCGATGCTACTTTCCATC+CGG 0.473242 2_3:+28847736 None:intergenic
GTATGAGCTCCATTAGGAAA+TGG 0.473712 2_3:+28851408 None:intergenic
AGCAAACTACCTGTAACAAC+AGG 0.473796 2_3:-28846080 Msa0286940:CDS
TGTTCACAAATTTGTCCAAT+GGG 0.474943 2_3:+28847831 None:intergenic
TCAAATGGCGAACTTTCAAT+GGG 0.476870 2_3:+28849369 None:intergenic
AGTAAGCTTGATCAATAAAA+GGG 0.477845 2_3:+28847702 None:intergenic
TGCTTCTCTCTTCAAACAGA+AGG 0.478022 2_3:-28847273 Msa0286940:CDS
AAATACAGAGAAGAAACTTT+CGG 0.478451 2_3:-28846111 Msa0286940:CDS
TTAAACAGCAAACACATCTC+TGG 0.478567 2_3:+28846756 None:intergenic
ATCTAGGGAGACAATTCTCT+TGG 0.478692 2_3:-28849517 Msa0286940:CDS
TCATGTTGCAGGCTGCTGAA+GGG 0.479495 2_3:-28847206 Msa0286940:CDS
TGCTCTGTGTATGTCTCTAT+CGG 0.479706 2_3:+28849288 None:intergenic
CATGTTGCAGGCTGCTGAAG+GGG 0.481462 2_3:-28847205 Msa0286940:CDS
CCAAAATACAGCCCCACGTC+TGG 0.481906 2_3:+28847417 None:intergenic
AATTGTCGCATGACAAGTGC+TGG 0.482123 2_3:-28846169 Msa0286940:CDS
GGTTTGTGAGAACTATGTTA+TGG 0.482303 2_3:-28845231 Msa0286940:three_prime_UTR
ACATGATTAAACTTCTCAAA+TGG 0.482821 2_3:+28849354 None:intergenic
TGTAAGAAACAAAAGGACTT+CGG 0.482864 2_3:+28849923 None:intergenic
AGGAGGACTGTATCCATTAA+CGG 0.483012 2_3:+28848126 None:intergenic
GATCCACAAAGAAAGGCAAT+AGG 0.483396 2_3:-28850477 Msa0286940:CDS
CATTGTCTTGCCCCTGAAGC+CGG 0.483637 2_3:-28849988 Msa0286940:CDS
GGATGAATTTAAGCATCAAA+AGG 0.484194 2_3:+28847876 None:intergenic
CAAGTACACTTCTTCCTCTC+GGG 0.484531 2_3:+28849197 None:intergenic
TCCTCCCATCATGAGAAGAT+AGG 0.486346 2_3:+28849169 None:intergenic
ATAAAATATGTGGCTTCTGA+TGG 0.487168 2_3:-28848931 Msa0286940:CDS
TTATATCTCCTCCAAATGCT+GGG 0.488154 2_3:-28848288 Msa0286940:CDS
CAACTTCTGGATGAAAAGCT+TGG 0.489414 2_3:+28845581 None:intergenic
GGCAAGACAATGGTTGTAGT+TGG 0.490621 2_3:+28849999 None:intergenic
AAGATGACAAAATGGTTCGC+TGG 0.490814 2_3:-28845617 Msa0286940:CDS
CTGTTCACAAATTTGTCCAA+TGG 0.493053 2_3:+28847830 None:intergenic
TGTTGATCTTTGGAATGAAT+GGG 0.493934 2_3:-28846207 Msa0286940:CDS
CCAGAAGTTGGATGAGCCGC+AGG 0.494550 2_3:-28845568 Msa0286940:CDS
TATTCCATTGATAAAATATG+TGG 0.495033 2_3:-28848941 Msa0286940:CDS
TGATTGTTTCTAATCCTTGG+AGG 0.495055 2_3:-28848435 Msa0286940:CDS
TGAAGATATTGAATTTCTGA+TGG 0.495113 2_3:-28845418 Msa0286940:CDS
ACTTGATACCGGAGCTTGAT+CGG 0.495364 2_3:+28849416 None:intergenic
GTAATGGTGGAGGGATCTGA+AGG 0.495802 2_3:+28846909 None:intergenic
TCAAGCAAAATATTGTTGAC+AGG 0.496862 2_3:+28845176 None:intergenic
AATAGGAGCAGTGGTTACAT+AGG 0.497331 2_3:-28850460 Msa0286940:CDS
TAAAGACATCTGAAGGTCTC+AGG 0.499498 2_3:-28847787 Msa0286940:CDS
GCTGAATGATGGTGTTGAAA+TGG 0.500210 2_3:-28845850 Msa0286940:CDS
AAAATCTTAAATTCATTGAA+GGG 0.501087 2_3:-28847500 Msa0286940:CDS
TGTCAAAGAGGCCAAATTTG+AGG 0.501485 2_3:+28847577 None:intergenic
TTAAATTCATCCAATATCTC+AGG 0.501765 2_3:-28847865 Msa0286940:CDS
TCAATAAAAGGCCCATCAGT+TGG 0.504851 2_3:+28846708 None:intergenic
AGACTATTGTCAAAATATAC+AGG 0.505568 2_3:-28846560 Msa0286940:intron
ACAAAATGGTTCGCTGGGAA+AGG 0.506080 2_3:-28845611 Msa0286940:CDS
AGTGGTTACATAGGAGAGAA+AGG 0.506839 2_3:-28850451 Msa0286940:intron
CAGGAGAAGTCTTCTCCCAT+TGG 0.507963 2_3:-28847846 Msa0286940:CDS
TCTGATGACATTACTGCTAC+TGG 0.509465 2_3:-28850580 Msa0286940:CDS
TGTCCACCTTCAGTGCCATT+GGG 0.510539 2_3:+28846380 None:intergenic
TCATTCAATACAGATCCAAC+AGG 0.510860 2_3:+28847761 None:intergenic
TGCCACTTGTTGACAACTAT+GGG 0.510885 2_3:-28848519 Msa0286940:CDS
AGAAGCAGACTTTGATGGAA+TGG 0.511173 2_3:-28848714 Msa0286940:CDS
CTCAAGGTGACCTGCAAGCA+AGG 0.511339 2_3:+28846599 None:intergenic
AAGAGGCATGAAGCTGTTCA+AGG 0.512411 2_3:-28845729 Msa0286940:CDS
TTGTCACTGTCGTCAATGAA+AGG 0.513515 2_3:+28847038 None:intergenic
AAGAGAACTGCATAGGACAT+TGG 0.513715 2_3:+28848645 None:intergenic
AAGCAAAGAGATATTTCTGC+TGG 0.515354 2_3:-28846057 Msa0286940:CDS
GTCAAAGAGGCCAAATTTGA+GGG 0.516129 2_3:+28847578 None:intergenic
GCAAGTACACTTCTTCCTCT+CGG 0.516457 2_3:+28849196 None:intergenic
CTAAATTCCTCATCTTATGC+AGG 0.516492 2_3:-28848379 Msa0286940:CDS
TGGATTCCCAATGGCACTGA+AGG 0.517804 2_3:-28846386 Msa0286940:CDS
AAGGAAGAACTGAAGATCCT+TGG 0.519469 2_3:-28846987 Msa0286940:CDS
GGACAAAATCAAAGCAAAGT+TGG 0.520170 2_3:-28849328 Msa0286940:CDS
CCTTCAGATGTCTTTAGCCA+AGG 0.520212 2_3:+28847794 None:intergenic
TATGCCAGAAAACACGCAAA+AGG 0.520805 2_3:-28848761 Msa0286940:CDS
AAATCAGGAGAGGCTTCATA+GGG 0.521464 2_3:-28849631 Msa0286940:CDS
GCATTTGGAGGAGATATAAG+AGG 0.522118 2_3:+28848292 None:intergenic
CAGAAGCACTTCTATAAGCC+TGG 0.523495 2_3:-28849267 Msa0286940:CDS
TTAACCTATCTTCTCATGAT+GGG 0.525256 2_3:-28849173 Msa0286940:CDS
AGATGACAAAATGGTTCGCT+GGG 0.525856 2_3:-28845616 Msa0286940:CDS
CATCCACAAGATTAGAACTC+TGG 0.527727 2_3:+28849049 None:intergenic
CATCCAGAGTTCTAATCTTG+TGG 0.527876 2_3:-28849052 Msa0286940:CDS
TTGAAAATAAGTAATGTGGC+TGG 0.527999 2_3:+28850553 None:intergenic
TGAAGAATGGGTTGTGACAC+TGG 0.528035 2_3:-28849661 Msa0286940:CDS
TATGCTCTTCATATAAACTT+CGG 0.528299 2_3:+28846853 None:intergenic
TTCTTGAAGATATCTATGAT+AGG 0.529049 2_3:-28846292 Msa0286940:CDS
GTACCAGCTGTGAAGAAGAA+TGG 0.530285 2_3:+28851588 None:intergenic
TCTGCCTTCCCTTCTGACTG+AGG 0.531085 2_3:-28845348 Msa0286940:exon
ATTATTGAAAATAAGTAATG+TGG 0.531522 2_3:+28850549 None:intergenic
CCTGAGCTTCATTGAGGCAA+AGG 0.532255 2_3:-28845697 Msa0286940:CDS
TAGAATAAACAAGTATGAAG+AGG 0.532384 2_3:-28848005 Msa0286940:CDS
AGGACAAAGTTCTCTATTGG+TGG 0.533214 2_3:-28851506 Msa0286940:CDS
GAACACATTCAAGTATCCCT+TGG 0.535610 2_3:+28849481 None:intergenic
TCAGAAGTGGCTGTATACTA+AGG 0.535657 2_3:-28847138 Msa0286940:CDS
AATGTATAAAAGATGGCAGC+TGG 0.535839 2_3:-28848159 Msa0286940:CDS
AGCTCTGACTTCCATGGCAA+AGG 0.536827 2_3:+28846250 None:intergenic
GGAAGCAAAAGTTTCCGGTC+AGG 0.537304 2_3:-28849716 Msa0286940:CDS
CTTCATTGAGGCAAAGGTCC+CGG 0.537861 2_3:-28845691 Msa0286940:CDS
TCCATGGCAAAGGTAAAGAA+AGG 0.539229 2_3:+28846260 None:intergenic
TGCATTTCTTCCTACAGAGA+TGG 0.539549 2_3:-28849586 Msa0286940:CDS
CTTTCTTTAATCCAACTGAT+GGG 0.540609 2_3:-28846719 Msa0286940:CDS
ATTCCCAATGGCACTGAAGG+TGG 0.541677 2_3:-28846383 Msa0286940:CDS
GAAGGTCTCAGGTCTCCTGT+TGG 0.543070 2_3:-28847776 Msa0286940:CDS
GAATCCTCAGTCAGAAGGGA+AGG 0.543463 2_3:+28845344 None:intergenic
GAATCTTCCTTGCTGAATGA+TGG 0.544376 2_3:-28845861 Msa0286940:CDS
AATGAAAATTATGTTGAGCT+CGG 0.545690 2_3:-28848412 Msa0286940:CDS
ATGCAGAATCCTCAGTCAGA+AGG 0.547307 2_3:+28845339 None:intergenic
AATGAAGTATTTGTCAAAGC+GGG 0.547848 2_3:-28848566 Msa0286940:CDS
TCATTGATGAGAGCTTCTAT+GGG 0.548178 2_3:-28848030 Msa0286940:CDS
TATAACTTAGAAATGGAAGA+AGG 0.549391 2_3:+28845939 None:intergenic
CGCCCATAGTTGTCAACAAG+TGG 0.551293 2_3:+28848517 None:intergenic
ATGATTCTTACTTAAAGTGA+AGG 0.551548 2_3:+28847901 None:intergenic
GAATGCACACAGCACTATGC+AGG 0.553612 2_3:-28848883 Msa0286940:CDS
GTTGGAAGATCCACAAAGAA+AGG 0.555314 2_3:-28850484 Msa0286940:CDS
TGTCACTGTCGTCAATGAAA+GGG 0.556043 2_3:+28847039 None:intergenic
ATTGAGTCCATATGCAGTGT+TGG 0.556571 2_3:-28850502 Msa0286940:CDS
CAGTAACTTCTCTAACCGAA+AGG 0.556929 2_3:+28849889 None:intergenic
GGAGCTGAAGTTGTTGGGAG+TGG 0.557326 2_3:-28847651 Msa0286940:CDS
TTGAGAAGTTTAATCATGTG+AGG 0.557570 2_3:-28849350 Msa0286940:CDS
TGAAGATAACCACTATAATG+AGG 0.558427 2_3:-28850635 Msa0286940:CDS
CCTATCTGAATTGATCACGT+TGG 0.558706 2_3:-28845463 Msa0286940:CDS
TATAGTTCCTGAATGGGTTG+AGG 0.559108 2_3:-28850075 Msa0286940:CDS
GCATTCATAAAGACTGAAAG+AGG 0.559501 2_3:+28848900 None:intergenic
AAACACACTTTCAGGAGTAA+TGG 0.560473 2_3:+28846893 None:intergenic
GCAAGGAGCATCCTTTCTCT+AGG 0.560523 2_3:+28846616 None:intergenic
TGGATAATAAATGGAACCAA+GGG 0.561153 2_3:-28849497 Msa0286940:CDS
GCTGAAAACCCAGCATTTGG+AGG 0.561529 2_3:+28848280 None:intergenic
CGTGTCACAGAAACAAGAAA+GGG 0.562687 2_3:-28848496 Msa0286940:CDS
TTTGGCCTCTTTGACAGCTG+AGG 0.564150 2_3:-28847570 Msa0286940:CDS
TCTCAACCTGAGCTTCATTG+AGG 0.565445 2_3:-28845703 Msa0286940:CDS
AATTGGTTGAAGACACATGC+TGG 0.566666 2_3:-28846789 Msa0286940:CDS
TGAGGCAAAGGTCCCGGTCA+CGG 0.567221 2_3:-28845685 Msa0286940:CDS
GTTATGACAAACTCAAGTGC+TGG 0.568814 2_3:+28850604 None:intergenic
TGTAGGATCCGATCAAGCTC+CGG 0.569219 2_3:-28849424 Msa0286940:CDS
TCCGGTCAGGTCAGAAAATG+TGG 0.569876 2_3:-28849703 Msa0286940:CDS
CCAAGACTGCAATGTGGACA+AGG 0.569909 2_3:+28850101 None:intergenic
ATAGTCTATCACTGTCATCA+GGG 0.570016 2_3:-28845656 Msa0286940:CDS
AAGTGGCTGTATACTAAGGT+TGG 0.571857 2_3:-28847134 Msa0286940:CDS
TGAGAAGTTTAATCATGTGA+GGG 0.572028 2_3:-28849349 Msa0286940:CDS
TGATCAAGCTTACTTTGGTG+AGG 0.572342 2_3:-28847693 Msa0286940:CDS
TTGAAAGCTGCTGTTTAACA+GGG 0.572367 2_3:+28849955 None:intergenic
GGTCAGAAAATGTGGTTGAA+AGG 0.572463 2_3:-28849695 Msa0286940:CDS
AAATCTGCTTGAATAATGAA+AGG 0.572563 2_3:+28849552 None:intergenic
CGGCTTCAGGGGCAAGACAA+TGG 0.573496 2_3:+28849989 None:intergenic
GGGTTTAGCTCTGACTTCCA+TGG 0.573602 2_3:+28846244 None:intergenic
CAACGTGATCAATTCAGATA+GGG 0.575738 2_3:+28845464 None:intergenic
CAGAGTTCTAATCTTGTGGA+TGG 0.575789 2_3:-28849048 Msa0286940:CDS
TTGGATAATAAATGGAACCA+AGG 0.576105 2_3:-28849498 Msa0286940:CDS
AAGAAAATTTGGATTCCCAA+TGG 0.577495 2_3:-28846395 Msa0286940:CDS
ATAAAGCAGATATATGGTGC+TGG 0.578520 2_3:-28850032 Msa0286940:CDS
GCGTGTCACAGAAACAAGAA+AGG 0.578663 2_3:-28848497 Msa0286940:CDS
AACAGCCTCAGCTGTCAAAG+AGG 0.580638 2_3:+28847565 None:intergenic
AAATTAGTGACCATCTCTGT+AGG 0.582428 2_3:+28849576 None:intergenic
GCCTGCAAATGTGAGCAAAT+GGG 0.582565 2_3:-28848464 Msa0286940:CDS
GCAGTTATAGTGTTCTGTGT+GGG 0.585010 2_3:+28849861 None:intergenic
ATTAAAGAAAGAACTCCACT+TGG 0.586157 2_3:+28846731 None:intergenic
CATAGAAGCTCTCATCAATG+AGG 0.586536 2_3:+28848032 None:intergenic
TATTGTTTCAGAGAAATATG+TGG 0.588582 2_3:+28845527 None:intergenic
AGACAATGGTTGTAGTTGGA+AGG 0.589828 2_3:+28850003 None:intergenic
TTTATGATCAATCACAGGAA+GGG 0.590635 2_3:+28847382 None:intergenic
ATAGAAGCTCTCATCAATGA+GGG 0.591136 2_3:+28848033 None:intergenic
TGCAGAATCCTCAGTCAGAA+GGG 0.592252 2_3:+28845340 None:intergenic
GAAGATAACCACTATAATGA+GGG 0.592414 2_3:-28850634 Msa0286940:CDS
GTCACCACTGACCTAGAGAA+AGG 0.592850 2_3:-28846627 Msa0286940:CDS
TAGAATTTATGATCAATCAC+AGG 0.594080 2_3:+28847377 None:intergenic
TTCTCTGAAACAATATCAGA+AGG 0.595476 2_3:-28845519 Msa0286940:CDS
CTGTATTGAATGATTCCGGA+TGG 0.597662 2_3:-28847751 Msa0286940:CDS
CACACTTTCAGGAGTAATGG+TGG 0.598081 2_3:+28846896 None:intergenic
ATACGAGCCAAACTTGATAC+CGG 0.598781 2_3:+28849405 None:intergenic
AGCAGCCTACTAACGTCACC+AGG 0.599932 2_3:+28849249 None:intergenic
GATACTTGAATGTGTTCCAT+CGG 0.601004 2_3:-28849475 Msa0286940:CDS
CTGGATTGAAACATGGCGTG+AGG 0.601071 2_3:-28846956 Msa0286940:CDS
GTGATCAATTCAGATAGGGC+AGG 0.601107 2_3:+28845468 None:intergenic
GGAAGAAATGCATAGACCCC+TGG 0.601342 2_3:+28849597 None:intergenic
GGACAAAGTTCTCTATTGGT+GGG 0.601575 2_3:-28851505 Msa0286940:CDS
ATGGCGAACTTTCAATGGGA+AGG 0.602741 2_3:+28849373 None:intergenic
CCATTATACATAATCAGAAG+TGG 0.603923 2_3:-28847151 Msa0286940:CDS
ATATCTGCTTTATGTCAGCA+AGG 0.604303 2_3:+28850042 None:intergenic
CCTTGGCTAAAGACATCTGA+AGG 0.605729 2_3:-28847794 Msa0286940:CDS
TATCTGCTTTATGTCAGCAA+GGG 0.605809 2_3:+28850043 None:intergenic
TACGGCAATACATGAATACA+AGG 0.607899 2_3:-28847006 Msa0286940:CDS
ATTTATGATCAATCACAGGA+AGG 0.608359 2_3:+28847381 None:intergenic
GAAGATATAGATTTCCACTC+CGG 0.610406 2_3:+28847074 None:intergenic
TGATGAAGATCCTCAGTCAA+AGG 0.610610 2_3:+28851473 None:intergenic
AAGAGTGCAGCTACTACATG+TGG 0.611117 2_3:-28849737 Msa0286940:CDS
TAATGGTGGAGGGATCTGAA+GGG 0.614670 2_3:+28846910 None:intergenic
GAAGTATTTGTCAAAGCGGG+AGG 0.615263 2_3:-28848563 Msa0286940:CDS
TTGACCTTATCCGGCTTCAG+GGG 0.615618 2_3:+28849978 None:intergenic
GACTATAGTTAACCGTGACC+GGG 0.616292 2_3:+28845673 None:intergenic
ACCTATCTTCTCATGATGGG+AGG 0.616829 2_3:-28849170 Msa0286940:CDS
ATTAAGAACGACTTTGAAGG+AGG 0.617792 2_3:+28848109 None:intergenic
ATCAACATAATCATCAAGTG+AGG 0.619346 2_3:+28846223 None:intergenic
AAGAAAGGCAATAGGAGCAG+TGG 0.621388 2_3:-28850469 Msa0286940:CDS
AAGCCTCTCCTGATTTGGGA+AGG 0.622854 2_3:+28849638 None:intergenic
TTGTCTCCCTAGATGAGGCA+AGG 0.624139 2_3:+28849526 None:intergenic
AATACTTCATTGATAAAGAG+TGG 0.624505 2_3:+28848578 None:intergenic
AGCTGCTTGAAGACTAACAT+GGG 0.627080 2_3:-28847473 Msa0286940:CDS
TGGCACTGAAGGTGGACAGT+GGG 0.628274 2_3:-28846375 Msa0286940:CDS
TTCAACACCATCATTCAGCA+AGG 0.628441 2_3:+28845854 None:intergenic
CGCTGTCAGAGAGAATCTCA+AGG 0.628457 2_3:+28846583 None:intergenic
AATGCATCCATAAAGGCCGA+TGG 0.628693 2_3:+28849459 None:intergenic
ACTTTCAGGAGTAATGGTGG+AGG 0.632253 2_3:+28846899 None:intergenic
GTTTCTTGTATGACCAGACG+TGG 0.632264 2_3:-28847430 Msa0286940:CDS
GAATCCTAATCCTTTGACTG+AGG 0.633214 2_3:-28851483 Msa0286940:CDS
TCAACATAATCATCAAGTGA+GGG 0.641694 2_3:+28846224 None:intergenic
TGAAAATGGAACCAGACAAG+AGG 0.643004 2_3:-28845746 Msa0286940:CDS
GAAGGCCCAAAGTCCTGCTG+AGG 0.645412 2_3:+28845957 None:intergenic
GCATCCTTTCTCTAGGTCAG+TGG 0.646549 2_3:+28846623 None:intergenic
TTTCTTGTATGACCAGACGT+GGG 0.646686 2_3:-28847429 Msa0286940:CDS
CTTTCAGGAGTAATGGTGGA+GGG 0.646779 2_3:+28846900 None:intergenic
GAGAATTGTCTCCCTAGATG+AGG 0.647287 2_3:+28849521 None:intergenic
AAATTATGTTGAGCTCGGAA+AGG 0.647507 2_3:-28848407 Msa0286940:CDS
TGGCCTTCCCAAATCAGGAG+AGG 0.648967 2_3:-28849641 Msa0286940:CDS
AAGCTGCTTGAAGACTAACA+TGG 0.649184 2_3:-28847474 Msa0286940:CDS
ATGGCACTGAAGGTGGACAG+TGG 0.650381 2_3:-28846376 Msa0286940:CDS
CAGAAGGGAAGGCAGAACTG+AGG 0.652776 2_3:+28845355 None:intergenic
TCATACAAGAAACATTCACT+TGG 0.652808 2_3:+28847440 None:intergenic
ACAGCATTAGAGATGAACCT+TGG 0.654028 2_3:-28847811 Msa0286940:CDS
CAATGAAGTATTTGTCAAAG+CGG 0.658221 2_3:-28848567 Msa0286940:CDS
ATGGCTGATCAATTGGAACA+AGG 0.658523 2_3:-28848812 Msa0286940:CDS
CAGAGAAGAAACTTTCGGAG+AGG 0.659611 2_3:-28846106 Msa0286940:CDS
CAGAAGTTGGATGAGCCGCA+GGG 0.662110 2_3:-28845567 Msa0286940:CDS
GTTTGCTGTTTAATTCCAAG+TGG 0.662733 2_3:-28846746 Msa0286940:CDS
GCACTTTGCATACCAATCAA+CGG 0.667243 2_3:+28849074 None:intergenic
AACAGCAAACACATCTCTGG+AGG 0.669999 2_3:+28846759 None:intergenic
GTTGTTACTGGATTGAAACA+TGG 0.671297 2_3:-28846963 Msa0286940:CDS
AAATTGGCCTGCATAAGATG+AGG 0.673901 2_3:+28848372 None:intergenic
AGCAGTTATAGTGTTCTGTG+TGG 0.674116 2_3:+28849860 None:intergenic
TTCTTGTATGACCAGACGTG+GGG 0.677245 2_3:-28847428 Msa0286940:CDS
TAGTCTATCACTGTCATCAG+GGG 0.678681 2_3:-28845655 Msa0286940:CDS
GTGTCACAGAAACAAGAAAG+GGG 0.681652 2_3:-28848495 Msa0286940:CDS
TGGAGTGATGTCCAGTTGTG+AGG 0.682265 2_3:-28847969 Msa0286940:CDS
AGCATGTTGAAGAAATACGA+AGG 0.682738 2_3:-28851526 Msa0286940:CDS
GGAAATATATAGCTACAATG+AGG 0.687228 2_3:-28847672 Msa0286940:CDS
TGAATACAACTGGAAACCTG+AGG 0.690265 2_3:-28846429 Msa0286940:CDS
GAGGAGTGCACCTACCAGAG+AGG 0.691243 2_3:-28848189 Msa0286940:CDS
TAGGGGTAAAAGCTCACCAG+GGG 0.694911 2_3:-28849613 Msa0286940:CDS
TAGAAGCTCTCATCAATGAG+GGG 0.702345 2_3:+28848034 None:intergenic
CATTGATGAGAGCTTCTATG+GGG 0.703531 2_3:-28848029 Msa0286940:CDS
TATTTCAGTGCATTTCCCTG+CGG 0.710660 2_3:+28845552 None:intergenic
TCAATCCAGTAACAACACCA+AGG 0.725170 2_3:+28846970 None:intergenic
TGTCACAGAAACAAGAAAGG+GGG 0.733648 2_3:-28848494 Msa0286940:CDS
ATAGGGGTAAAAGCTCACCA+GGG 0.740878 2_3:-28849614 Msa0286940:CDS
AATCAGGAGAGGCTTCATAG+GGG 0.751305 2_3:-28849630 Msa0286940:CDS
ATATACCCAAGACTGCAATG+TGG 0.760728 2_3:+28850095 None:intergenic
CACACTACATCTCTCCACAG+AGG 0.760834 2_3:-28849778 Msa0286940:CDS
GTACGATGCATTCTTCAGAG+AGG 0.762566 2_3:+28846351 None:intergenic
ATTCGGAATCTGAAGCACAG+AGG 0.767947 2_3:-28848208 Msa0286940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTCTTTTTGAGT+AGG - chr2_3:28845304-28845323 Msa0286940:three_prime_UTR 15.0%
!! TTTGTGTTAAAAATTACATT+TGG - chr2_3:28845657-28845676 Msa0286940:CDS 15.0%
!!! TTTTTCCATTAAAATTGATT+TGG + chr2_3:28845731-28845750 None:intergenic 15.0%
!! ATTATTGAAAATAAGTAATG+TGG + chr2_3:28846053-28846072 None:intergenic 15.0%
!!! ACTTATTTTCAATAATGAAA+AGG - chr2_3:28846057-28846076 Msa0286940:CDS 15.0%
!!! CTTATTTTCAATAATGAAAA+GGG - chr2_3:28846058-28846077 Msa0286940:CDS 15.0%
!!! TTTTTGAAATGTATAAAAGA+TGG - chr2_3:28848433-28848452 Msa0286940:CDS 15.0%
!!! ATGAATTTAAGATTTTACTA+GGG + chr2_3:28849095-28849114 None:intergenic 15.0%
!!! AATGAATTTAAGATTTTACT+AGG + chr2_3:28849096-28849115 None:intergenic 15.0%
!! TAAAATCTTAAATTCATTGA+AGG - chr2_3:28849098-28849117 Msa0286940:CDS 15.0%
!! AAAATCTTAAATTCATTGAA+GGG - chr2_3:28849099-28849118 Msa0286940:CDS 15.0%
!! AAAAATGAACTGAAAAAAAT+CGG - chr2_3:28849267-28849286 Msa0286940:CDS 15.0%
!! TAAAAATTTGCATCAATAAA+AGG + chr2_3:28849906-28849925 None:intergenic 15.0%
!!! TTTATTGATGCAAATTTTTA+TGG - chr2_3:28849906-28849925 Msa0286940:CDS 15.0%
!! ATAATATTGTGAATATACAT+AGG - chr2_3:28850139-28850158 Msa0286940:CDS 15.0%
!! ATTATACTAAGAAAGAAAAG+AGG + chr2_3:28845239-28845258 None:intergenic 20.0%
!! TATACTATTTAGTGTTTGTT+TGG - chr2_3:28845546-28845565 Msa0286940:CDS 20.0%
!!! AGTTGAATGTTTTACTTATT+TGG - chr2_3:28846266-28846285 Msa0286940:CDS 20.0%
!! TTTATATCACTTGATTAACA+AGG + chr2_3:28846296-28846315 None:intergenic 20.0%
!! TATCCATTGCTAAAAATATA+CGG + chr2_3:28846456-28846475 None:intergenic 20.0%
!!! TGATTTTTGTAAGAAACAAA+AGG + chr2_3:28846686-28846705 None:intergenic 20.0%
!!! ATAATGTACTCAACTTTTTA+GGG - chr2_3:28847489-28847508 Msa0286940:CDS 20.0%
!! TATTCCATTGATAAAATATG+TGG - chr2_3:28847658-28847677 Msa0286940:CDS 20.0%
!!! CATATAAAATGCATTGTTTT+GGG + chr2_3:28849503-28849522 None:intergenic 20.0%
!!! GATATTCTTTTCAACTTAAA+AGG - chr2_3:28850789-28850808 Msa0286940:intron 20.0%
!!! GCTTGATTAATTTTATTTGA+TGG - chr2_3:28851440-28851459 Msa0286940:CDS 20.0%
!! TATAAAGTAAAAGAGAACAA+AGG + chr2_3:28851480-28851499 None:intergenic 20.0%
!! AGAGTCCAAATCAATTTTAA+TGG - chr2_3:28845723-28845742 Msa0286940:CDS 25.0%
!! AAAGACATTAGCAATTTTAG+AGG + chr2_3:28845783-28845802 None:intergenic 25.0%
! GAGAACTAATATAAAAGTCA+CGG - chr2_3:28845809-28845828 Msa0286940:CDS 25.0%
! ATTGAGTTTGAGAACAAAAT+TGG + chr2_3:28845870-28845889 None:intergenic 25.0%
! TCTTAAAATGTAGTGTACTT+TGG - chr2_3:28846198-28846217 Msa0286940:CDS 25.0%
! CATTGACAAAATCTCTTTAA+TGG - chr2_3:28846381-28846400 Msa0286940:CDS 25.0%
! AAATCTGCTTGAATAATGAA+AGG + chr2_3:28847050-28847069 None:intergenic 25.0%
! CAATTCTCTTGGATAATAAA+TGG - chr2_3:28847093-28847112 Msa0286940:CDS 25.0%
! ACATGATTAAACTTCTCAAA+TGG + chr2_3:28847248-28847267 None:intergenic 25.0%
!! GATAATGTACTCAACTTTTT+AGG - chr2_3:28847488-28847507 Msa0286940:CDS 25.0%
!! TAATGTACTCAACTTTTTAG+GGG - chr2_3:28847490-28847509 Msa0286940:CDS 25.0%
!! TATTGTTTGTTGCTAATAAC+TGG - chr2_3:28847603-28847622 Msa0286940:CDS 25.0%
!!! TATTTTTAAGAGAACTGCAT+AGG + chr2_3:28847964-28847983 None:intergenic 25.0%
! AATACTTCATTGATAAAGAG+TGG + chr2_3:28848024-28848043 None:intergenic 25.0%
! AATGAAAATTATGTTGAGCT+CGG - chr2_3:28848187-28848206 Msa0286940:CDS 25.0%
! TAGAATAAACAAGTATGAAG+AGG - chr2_3:28848594-28848613 Msa0286940:CDS 25.0%
! ATGATTCTTACTTAAAGTGA+AGG + chr2_3:28848701-28848720 None:intergenic 25.0%
! TTAAATTCATCCAATATCTC+AGG - chr2_3:28848734-28848753 Msa0286940:CDS 25.0%
! AGTAAGCTTGATCAATAAAA+GGG + chr2_3:28848900-28848919 None:intergenic 25.0%
! AAGTAAGCTTGATCAATAAA+AGG + chr2_3:28848901-28848920 None:intergenic 25.0%
! TTTATTGATCAAGCTTACTT+TGG - chr2_3:28848901-28848920 Msa0286940:CDS 25.0%
!! TTAAGTGCTTGATAACAATT+TGG + chr2_3:28848996-28849015 None:intergenic 25.0%
! TAGAATTTATGATCAATCAC+AGG + chr2_3:28849225-28849244 None:intergenic 25.0%
! GTGATTGATCATAAATTCTA+TGG - chr2_3:28849225-28849244 Msa0286940:CDS 25.0%
! ATAATGGTAGAAAAATCAGA+AGG + chr2_3:28849435-28849454 None:intergenic 25.0%
!! CCATATAAAATGCATTGTTT+TGG + chr2_3:28849504-28849523 None:intergenic 25.0%
!! CCAAAACAATGCATTTTATA+TGG - chr2_3:28849501-28849520 Msa0286940:CDS 25.0%
! TATGCTCTTCATATAAACTT+CGG + chr2_3:28849749-28849768 None:intergenic 25.0%
! CAGAAAGAATTCAATGTAAT+CGG - chr2_3:28849948-28849967 Msa0286940:CDS 25.0%
! AGACTATTGTCAAAATATAC+AGG - chr2_3:28850039-28850058 Msa0286940:CDS 25.0%
! TTAAACCAAAAAGCTTATCA+GGG + chr2_3:28850278-28850297 None:intergenic 25.0%
! TTTAAACCAAAAAGCTTATC+AGG + chr2_3:28850279-28850298 None:intergenic 25.0%
! TTCTTGAAGATATCTATGAT+AGG - chr2_3:28850307-28850326 Msa0286940:intron 25.0%
!! TTGATGATTATGTTGATCTT+TGG - chr2_3:28850382-28850401 Msa0286940:intron 25.0%
! ATGTTTATCCTGAAACATTT+GGG - chr2_3:28850462-28850481 Msa0286940:CDS 25.0%
! AAATACAGAGAAGAAACTTT+CGG - chr2_3:28850488-28850507 Msa0286940:CDS 25.0%
! TATAACTTAGAAATGGAAGA+AGG + chr2_3:28850663-28850682 None:intergenic 25.0%
! GATGTCATATAACTTAGAAA+TGG + chr2_3:28850670-28850689 None:intergenic 25.0%
! TATGACATCTACAGAAAAAT+TGG - chr2_3:28850681-28850700 Msa0286940:intron 25.0%
! TACAAAGAAAGATGACAAAA+TGG - chr2_3:28850974-28850993 Msa0286940:intron 25.0%
! TATTGTTTCAGAGAAATATG+TGG + chr2_3:28851075-28851094 None:intergenic 25.0%
! TGAAGATATTGAATTTCTGA+TGG - chr2_3:28851181-28851200 Msa0286940:intron 25.0%
!!! TTTCTTTGTTCTCTTTTTTG+TGG - chr2_3:28851347-28851366 Msa0286940:intron 25.0%
! CTTTATAATCATGCACTTTA+TGG - chr2_3:28851493-28851512 Msa0286940:CDS 25.0%
! TAAATTACATTCCAGAACTT+AGG - chr2_3:28851608-28851627 Msa0286940:five_prime_UTR 25.0%
TTTCAGTTAGAGAAGATCAA+TGG - chr2_3:28845038-28845057 Msa0286940:three_prime_UTR 30.0%
! ATTTCTTCAACATGCTCTTT+TGG + chr2_3:28845069-28845088 None:intergenic 30.0%
! GACATCTTTTGCATAAAGTT+CGG + chr2_3:28845172-28845191 None:intergenic 30.0%
AAAAGATGTCCATTTCCTAA+TGG - chr2_3:28845182-28845201 Msa0286940:three_prime_UTR 30.0%
TGAAGATAACCACTATAATG+AGG - chr2_3:28845964-28845983 Msa0286940:CDS 30.0%
GAAGATAACCACTATAATGA+GGG - chr2_3:28845965-28845984 Msa0286940:CDS 30.0%
TTGAAAATAAGTAATGTGGC+TGG + chr2_3:28846049-28846068 None:intergenic 30.0%
!!! CATATGGACTCAATGTTTTT+TGG + chr2_3:28846091-28846110 None:intergenic 30.0%
! CTTCAATTTGGCTACTTTAA+TGG + chr2_3:28846347-28846366 None:intergenic 30.0%
TTGCACAATCATCTTCAATT+TGG + chr2_3:28846359-28846378 None:intergenic 30.0%
CTCTTTAATGGTTGAATTTC+AGG - chr2_3:28846393-28846412 Msa0286940:CDS 30.0%
AATGGTTGAATTTCAGGAAT+TGG - chr2_3:28846399-28846418 Msa0286940:CDS 30.0%
TTAGCAATGGATATCAGATA+AGG - chr2_3:28846463-28846482 Msa0286940:intron 30.0%
TGTAAGAAACAAAAGGACTT+CGG + chr2_3:28846679-28846698 None:intergenic 30.0%
TACAAAAATCAGACACCTTT+CGG - chr2_3:28846695-28846714 Msa0286940:CDS 30.0%
TTGGATAATAAATGGAACCA+AGG - chr2_3:28847101-28847120 Msa0286940:CDS 30.0%
TGGATAATAAATGGAACCAA+GGG - chr2_3:28847102-28847121 Msa0286940:CDS 30.0%
!! TGTTTTGAATGCATCCATAA+AGG + chr2_3:28847150-28847169 None:intergenic 30.0%
TTGAGAAGTTTAATCATGTG+AGG - chr2_3:28847249-28847268 Msa0286940:CDS 30.0%
TGAGAAGTTTAATCATGTGA+GGG - chr2_3:28847250-28847269 Msa0286940:CDS 30.0%
TTAACCTATCTTCTCATGAT+GGG - chr2_3:28847426-28847445 Msa0286940:CDS 30.0%
!! TAACTGGTCTTCAAGATTTA+AGG - chr2_3:28847619-28847638 Msa0286940:CDS 30.0%
!! AACTGGTCTTCAAGATTTAA+GGG - chr2_3:28847620-28847639 Msa0286940:CDS 30.0%
! GAAGCCACATATTTTATCAA+TGG + chr2_3:28847665-28847684 None:intergenic 30.0%
ATAAAATATGTGGCTTCTGA+TGG - chr2_3:28847668-28847687 Msa0286940:CDS 30.0%
!! TGTTTTCTGGCATATAAAAC+CGG + chr2_3:28847832-28847851 None:intergenic 30.0%
CAAAAAATGAGCATATGCAA+TGG + chr2_3:28847999-28848018 None:intergenic 30.0%
! CAATGAAGTATTTGTCAAAG+CGG - chr2_3:28848032-28848051 Msa0286940:CDS 30.0%
! AATGAAGTATTTGTCAAAGC+GGG - chr2_3:28848033-28848052 Msa0286940:CDS 30.0%
!! ACTTGATTGTTTCTAATCCT+TGG - chr2_3:28848161-28848180 Msa0286940:CDS 30.0%
! ACATAATTTTCATTCCTCCA+AGG + chr2_3:28848181-28848200 None:intergenic 30.0%
GAGAAAATTAATAAGCTTCC+CGG + chr2_3:28848260-28848279 None:intergenic 30.0%
! AATTTTCTCACAACTCATGT+TGG - chr2_3:28848271-28848290 Msa0286940:CDS 30.0%
!!! AAGCAAAAAGGCATTGTTTT+TGG + chr2_3:28848362-28848381 None:intergenic 30.0%
! AAACAATGCCTTTTTGCTTT+TGG - chr2_3:28848363-28848382 Msa0286940:CDS 30.0%
AATCCAATCCAAAAGCAAAA+AGG + chr2_3:28848374-28848393 None:intergenic 30.0%
!! TTTTGCTTTTGGATTGGATT+CGG - chr2_3:28848374-28848393 Msa0286940:CDS 30.0%
ATACATTTCAAAAACCTCTC+TGG + chr2_3:28848427-28848446 None:intergenic 30.0%
AAAAATCTTGCAAAGTGGTT+CGG - chr2_3:28848528-28848547 Msa0286940:CDS 30.0%
GGATGAATTTAAGCATCAAA+AGG + chr2_3:28848726-28848745 None:intergenic 30.0%
TGTTCACAAATTTGTCCAAT+GGG + chr2_3:28848771-28848790 None:intergenic 30.0%
GGAAATATATAGCTACAATG+AGG - chr2_3:28848927-28848946 Msa0286940:CDS 30.0%
CTTAAAATCACCCTCAAATT+TGG - chr2_3:28849011-28849030 Msa0286940:CDS 30.0%
AATGGAATGCATCAAATTCT+TGG - chr2_3:28849065-28849084 Msa0286940:CDS 30.0%
TCATACAAGAAACATTCACT+TGG + chr2_3:28849162-28849181 None:intergenic 30.0%
TTTATGATCAATCACAGGAA+GGG + chr2_3:28849220-28849239 None:intergenic 30.0%
ATTTATGATCAATCACAGGA+AGG + chr2_3:28849221-28849240 None:intergenic 30.0%
CCACTTCTGATTATGTATAA+TGG + chr2_3:28849451-28849470 None:intergenic 30.0%
CCATTATACATAATCAGAAG+TGG - chr2_3:28849448-28849467 Msa0286940:CDS 30.0%
! ACAATGCATTTTATATGGTC+CGG - chr2_3:28849506-28849525 Msa0286940:CDS 30.0%
! CAGTGACAAATTTTATGGTA+CGG - chr2_3:28849575-28849594 Msa0286940:CDS 30.0%
GAAGGGAAATTAAGACATTT+AGG + chr2_3:28849675-28849694 None:intergenic 30.0%
ATTAAAGAAAGAACTCCACT+TGG + chr2_3:28849871-28849890 None:intergenic 30.0%
TCTTTCTTTAATCCAACTGA+TGG - chr2_3:28849879-28849898 Msa0286940:CDS 30.0%
CTTTCTTTAATCCAACTGAT+GGG - chr2_3:28849880-28849899 Msa0286940:CDS 30.0%
CGATTACATTGAATTCTTTC+TGG + chr2_3:28849950-28849969 None:intergenic 30.0%
ATCAAAGTCAAAGAGAGTTA+AGG + chr2_3:28850121-28850140 None:intergenic 30.0%
ATAAAGCTGCCAAGAAAATT+TGG - chr2_3:28850193-28850212 Msa0286940:intron 30.0%
! ATTGGGAATCCAAATTTTCT+TGG + chr2_3:28850205-28850224 None:intergenic 30.0%
AAGAAAATTTGGATTCCCAA+TGG - chr2_3:28850204-28850223 Msa0286940:intron 30.0%
TCAACATAATCATCAAGTGA+GGG + chr2_3:28850378-28850397 None:intergenic 30.0%
ATCAACATAATCATCAAGTG+AGG + chr2_3:28850379-28850398 None:intergenic 30.0%
!! ATGTTGATCTTTGGAATGAA+TGG - chr2_3:28850391-28850410 Msa0286940:intron 30.0%
!! TGTTGATCTTTGGAATGAAT+GGG - chr2_3:28850392-28850411 Msa0286940:intron 30.0%
GATGTTTATCCTGAAACATT+TGG - chr2_3:28850461-28850480 Msa0286940:CDS 30.0%
!! TTCTCTGAAACAATATCAGA+AGG - chr2_3:28851080-28851099 Msa0286940:intron 30.0%
! ACAGAAAATCTGCATGTTTT+TGG + chr2_3:28851210-28851229 None:intergenic 30.0%
TCAAGCAAAATATTGTTGAC+AGG + chr2_3:28851426-28851445 None:intergenic 30.0%
ATCAACATATGCTCAGAATT+TGG - chr2_3:28851564-28851583 Msa0286940:exon 30.0%
AGCATGTTGAAGAAATACGA+AGG - chr2_3:28845073-28845092 Msa0286940:three_prime_UTR 35.0%
ATACTTGTATGAGCTCCATT+AGG + chr2_3:28845200-28845219 None:intergenic 35.0%
ATGTAAAAGAAGAACGAGCA+TGG + chr2_3:28845350-28845369 None:intergenic 35.0%
!! ATGCGATCGTGTTTTTATGA+GGG - chr2_3:28845472-28845491 Msa0286940:CDS 35.0%
! AAGATGGACTTGTGCTAATA+TGG - chr2_3:28846225-28846244 Msa0286940:CDS 35.0%
!!! CAGCCGTATATTTTTAGCAA+TGG - chr2_3:28846450-28846469 Msa0286940:intron 35.0%
TTGGGTATATAGTTCCTGAA+TGG - chr2_3:28846517-28846536 Msa0286940:intron 35.0%
TGGGTATATAGTTCCTGAAT+GGG - chr2_3:28846518-28846537 Msa0286940:intron 35.0%
TATCTGCTTTATGTCAGCAA+GGG + chr2_3:28846559-28846578 None:intergenic 35.0%
ATATCTGCTTTATGTCAGCA+AGG + chr2_3:28846560-28846579 None:intergenic 35.0%
GCTGACATAAAGCAGATATA+TGG - chr2_3:28846561-28846580 Msa0286940:CDS 35.0%
ATAAAGCAGATATATGGTGC+TGG - chr2_3:28846567-28846586 Msa0286940:CDS 35.0%
! TTGAAAGCTGCTGTTTAACA+GGG + chr2_3:28846647-28846666 None:intergenic 35.0%
GTAAGAAACAAAAGGACTTC+GGG + chr2_3:28846678-28846697 None:intergenic 35.0%
! AGCATTACTATTTTCCTCTG+TGG + chr2_3:28846838-28846857 None:intergenic 35.0%
GAGAACAGATGTTGAAGAAT+GGG - chr2_3:28846926-28846945 Msa0286940:CDS 35.0%
AAATTAGTGACCATCTCTGT+AGG + chr2_3:28847026-28847045 None:intergenic 35.0%
GATACTTGAATGTGTTCCAT+CGG - chr2_3:28847124-28847143 Msa0286940:CDS 35.0%
!! GCATTCAAAACACTTGTTGT+AGG - chr2_3:28847158-28847177 Msa0286940:CDS 35.0%
TCAAATGGCGAACTTTCAAT+GGG + chr2_3:28847233-28847252 None:intergenic 35.0%
GGACAAAATCAAAGCAAAGT+TGG - chr2_3:28847271-28847290 Msa0286940:CDS 35.0%
CTTAACCTATCTTCTCATGA+TGG - chr2_3:28847425-28847444 Msa0286940:CDS 35.0%
TTAAACTAGTGACCGTTGAT+TGG - chr2_3:28847513-28847532 Msa0286940:CDS 35.0%
GCATTCATAAAGACTGAAAG+AGG + chr2_3:28847702-28847721 None:intergenic 35.0%
! AACAAGGAATTTTCATGTGC+AGG - chr2_3:28847803-28847822 Msa0286940:CDS 35.0%
! AATTTTCATGTGCAGGAAAC+CGG - chr2_3:28847810-28847829 Msa0286940:CDS 35.0%
!! TGATTGTTTCTAATCCTTGG+AGG - chr2_3:28848164-28848183 Msa0286940:CDS 35.0%
AAATTATGTTGAGCTCGGAA+AGG - chr2_3:28848192-28848211 Msa0286940:CDS 35.0%
CTGCATAAGATGAGGAATTT+AGG + chr2_3:28848222-28848241 None:intergenic 35.0%
CTAAATTCCTCATCTTATGC+AGG - chr2_3:28848220-28848239 Msa0286940:CDS 35.0%
TTATATCTCCTCCAAATGCT+GGG - chr2_3:28848311-28848330 Msa0286940:CDS 35.0%
!!! AAGGCATTGTTTTTGGTAAG+TGG + chr2_3:28848355-28848374 None:intergenic 35.0%
!! ATGCCTTTTTGCTTTTGGAT+TGG - chr2_3:28848368-28848387 Msa0286940:CDS 35.0%
ATTTCAAAAACCTCTCTGGT+AGG + chr2_3:28848423-28848442 None:intergenic 35.0%
AATGTATAAAAGATGGCAGC+TGG - chr2_3:28848440-28848459 Msa0286940:CDS 35.0%
TGGCTTAAAGTTTCCGTTAA+TGG - chr2_3:28848460-28848479 Msa0286940:CDS 35.0%
! ATTAAGAACGACTTTGAAGG+AGG + chr2_3:28848493-28848512 None:intergenic 35.0%
CGAATTAAGAACGACTTTGA+AGG + chr2_3:28848496-28848515 None:intergenic 35.0%
! CTTTGCAAGATTTTTCCCAA+TGG + chr2_3:28848523-28848542 None:intergenic 35.0%
TTGGGAAAAATCTTGCAAAG+TGG - chr2_3:28848523-28848542 Msa0286940:CDS 35.0%
ATAGAAGCTCTCATCAATGA+GGG + chr2_3:28848569-28848588 None:intergenic 35.0%
TCATTGATGAGAGCTTCTAT+GGG - chr2_3:28848569-28848588 Msa0286940:CDS 35.0%
GAAGAGGAGTTGAAAACAAT+TGG - chr2_3:28848610-28848629 Msa0286940:CDS 35.0%
! GAGGAAGCATGTAAATTCAT+TGG - chr2_3:28848649-28848668 Msa0286940:CDS 35.0%
CTGTTCACAAATTTGTCCAA+TGG + chr2_3:28848772-28848791 None:intergenic 35.0%
TCATTCAATACAGATCCAAC+AGG + chr2_3:28848841-28848860 None:intergenic 35.0%
GGATCTGTATTGAATGATTC+CGG - chr2_3:28848844-28848863 Msa0286940:CDS 35.0%
! TGAGGCTGTTCTTTTGATAA+TGG - chr2_3:28849047-28849066 Msa0286940:CDS 35.0%
! TGTCATTTCTTTCATGTTGC+AGG - chr2_3:28849382-28849401 Msa0286940:CDS 35.0%
GAAGATATAGATTTCCACTC+CGG + chr2_3:28849528-28849547 None:intergenic 35.0%
! GACGACAGTGACAAATTTTA+TGG - chr2_3:28849570-28849589 Msa0286940:CDS 35.0%
TACGGCAATACATGAATACA+AGG - chr2_3:28849593-28849612 Msa0286940:CDS 35.0%
GTTGTTACTGGATTGAAACA+TGG - chr2_3:28849636-28849655 Msa0286940:CDS 35.0%
AAACACACTTTCAGGAGTAA+TGG + chr2_3:28849709-28849728 None:intergenic 35.0%
AGCAAAGAAAACACACTTTC+AGG + chr2_3:28849717-28849736 None:intergenic 35.0%
!! TGAAAGTGTGTTTTCTTTGC+TGG - chr2_3:28849716-28849735 Msa0286940:CDS 35.0%
CTTTCTGAACTCATCATCAA+TGG + chr2_3:28849778-28849797 None:intergenic 35.0%
GAAAGAGATTGTCCAGAAAT+TGG - chr2_3:28849793-28849812 Msa0286940:CDS 35.0%
ATGTGTCTTCAACCAATTTC+TGG + chr2_3:28849808-28849827 None:intergenic 35.0%
TTAAACAGCAAACACATCTC+TGG + chr2_3:28849846-28849865 None:intergenic 35.0%
!! GTTTGCTGTTTAATTCCAAG+TGG - chr2_3:28849853-28849872 Msa0286940:CDS 35.0%
TATTTGTGCCCAAATGTTTC+AGG + chr2_3:28850473-28850492 None:intergenic 35.0%
! AAGCAAAGAGATATTTCTGC+TGG - chr2_3:28850542-28850561 Msa0286940:CDS 35.0%
TTCTTCAGATGAAGGTTATC+AGG + chr2_3:28850588-28850607 None:intergenic 35.0%
CAAAAAGCTTCTTCAGATGA+AGG + chr2_3:28850596-28850615 None:intergenic 35.0%
! GGTTTGATTAAGCTGATTCT+CGG - chr2_3:28850810-28850829 Msa0286940:intron 35.0%
TATAGTCTATCACTGTCATC+AGG - chr2_3:28850942-28850961 Msa0286940:intron 35.0%
ATAGTCTATCACTGTCATCA+GGG - chr2_3:28850943-28850962 Msa0286940:intron 35.0%
CAACGTGATCAATTCAGATA+GGG + chr2_3:28851138-28851157 None:intergenic 35.0%
CTATCTGAATTGATCACGTT+GGG - chr2_3:28851137-28851156 Msa0286940:intron 35.0%
! AAACATGCAGATTTTCTGTG+AGG - chr2_3:28851211-28851230 Msa0286940:intron 35.0%
GGTTTGTGAGAACTATGTTA+TGG - chr2_3:28851368-28851387 Msa0286940:intron 35.0%
! ATTTGATGGCCTTTACAACA+TGG - chr2_3:28851454-28851473 Msa0286940:CDS 35.0%
TAACCATTCTTCTTCACAGC+TGG - chr2_3:28845008-28845027 Msa0286940:three_prime_UTR 40.0%
CGAAGGACAAAGTTCTCTAT+TGG - chr2_3:28845090-28845109 Msa0286940:three_prime_UTR 40.0%
AGGACAAAGTTCTCTATTGG+TGG - chr2_3:28845093-28845112 Msa0286940:three_prime_UTR 40.0%
GGACAAAGTTCTCTATTGGT+GGG - chr2_3:28845094-28845113 Msa0286940:three_prime_UTR 40.0%
GAATCCTAATCCTTTGACTG+AGG - chr2_3:28845116-28845135 Msa0286940:intron 40.0%
AGATCCTCAGTCAAAGGATT+AGG + chr2_3:28845123-28845142 None:intergenic 40.0%
TGATGAAGATCCTCAGTCAA+AGG + chr2_3:28845129-28845148 None:intergenic 40.0%
GTATGAGCTCCATTAGGAAA+TGG + chr2_3:28845194-28845213 None:intergenic 40.0%
GATCGCATGATTCTGGATAT+AGG + chr2_3:28845460-28845479 None:intergenic 40.0%
AAAACACGATCGCATGATTC+TGG + chr2_3:28845467-28845486 None:intergenic 40.0%
!! CATGCGATCGTGTTTTTATG+AGG - chr2_3:28845471-28845490 Msa0286940:CDS 40.0%
!! TGCGATCGTGTTTTTATGAG+GGG - chr2_3:28845473-28845492 Msa0286940:CDS 40.0%
ATTCCAGCTGTGTACATACT+AGG - chr2_3:28845835-28845854 Msa0286940:CDS 40.0%
ATACCTAGTATGTACACAGC+TGG + chr2_3:28845841-28845860 None:intergenic 40.0%
GCTGTGTACATACTAGGTAT+TGG - chr2_3:28845841-28845860 Msa0286940:CDS 40.0%
GTTATGACAAACTCAAGTGC+TGG + chr2_3:28845998-28846017 None:intergenic 40.0%
TCTGATGACATTACTGCTAC+TGG - chr2_3:28846019-28846038 Msa0286940:CDS 40.0%
ATTGAGTCCATATGCAGTGT+TGG - chr2_3:28846097-28846116 Msa0286940:CDS 40.0%
GTTGGAAGATCCACAAAGAA+AGG - chr2_3:28846115-28846134 Msa0286940:CDS 40.0%
GATCCACAAAGAAAGGCAAT+AGG - chr2_3:28846122-28846141 Msa0286940:CDS 40.0%
AATAGGAGCAGTGGTTACAT+AGG - chr2_3:28846139-28846158 Msa0286940:CDS 40.0%
AGTGGTTACATAGGAGAGAA+AGG - chr2_3:28846148-28846167 Msa0286940:CDS 40.0%
AGTGTACTTTGGACTCAAGA+TGG - chr2_3:28846209-28846228 Msa0286940:CDS 40.0%
ATTACGCTTGACTGTGAAGT+AGG - chr2_3:28846316-28846335 Msa0286940:CDS 40.0%
TTACGCTTGACTGTGAAGTA+GGG - chr2_3:28846317-28846336 Msa0286940:CDS 40.0%
! TGGTTTCAAGAGTGTGTTTC+TGG - chr2_3:28846419-28846438 Msa0286940:CDS 40.0%
GCTAAAAATATACGGCTGCA+TGG + chr2_3:28846448-28846467 None:intergenic 40.0%
ATATACCCAAGACTGCAATG+TGG + chr2_3:28846507-28846526 None:intergenic 40.0%
!! TATAGTTCCTGAATGGGTTG+AGG - chr2_3:28846524-28846543 Msa0286940:intron 40.0%
AGACAATGGTTGTAGTTGGA+AGG + chr2_3:28846599-28846618 None:intergenic 40.0%
TTAACAGGGTTGACCTTATC+CGG + chr2_3:28846633-28846652 None:intergenic 40.0%
! CTTGAAAGCTGCTGTTTAAC+AGG + chr2_3:28846648-28846667 None:intergenic 40.0%
CAGTAACTTCTCTAACCGAA+AGG + chr2_3:28846713-28846732 None:intergenic 40.0%
GCAGTTATAGTGTTCTGTGT+GGG + chr2_3:28846741-28846760 None:intergenic 40.0%
AGCAGTTATAGTGTTCTGTG+TGG + chr2_3:28846742-28846761 None:intergenic 40.0%
CATGTGGAAGCAAAAGTTTC+CGG - chr2_3:28846878-28846897 Msa0286940:CDS 40.0%
GGTCAGAAAATGTGGTTGAA+AGG - chr2_3:28846904-28846923 Msa0286940:CDS 40.0%
GGAGAACAGATGTTGAAGAA+TGG - chr2_3:28846925-28846944 Msa0286940:CDS 40.0%
TATGAAGCCTCTCCTGATTT+GGG + chr2_3:28846968-28846987 None:intergenic 40.0%
AAATCAGGAGAGGCTTCATA+GGG - chr2_3:28846968-28846987 Msa0286940:CDS 40.0%
TGCATTTCTTCCTACAGAGA+TGG - chr2_3:28847013-28847032 Msa0286940:CDS 40.0%
! ATTTTGTCCTTGCCTCATCT+AGG - chr2_3:28847066-28847085 Msa0286940:CDS 40.0%
! TTTTGTCCTTGCCTCATCTA+GGG - chr2_3:28847067-28847086 Msa0286940:CDS 40.0%
ATCTAGGGAGACAATTCTCT+TGG - chr2_3:28847082-28847101 Msa0286940:CDS 40.0%
GAACACATTCAAGTATCCCT+TGG + chr2_3:28847121-28847140 None:intergenic 40.0%
ATACGAGCCAAACTTGATAC+CGG + chr2_3:28847197-28847216 None:intergenic 40.0%
CTCAAATGGCGAACTTTCAA+TGG + chr2_3:28847234-28847253 None:intergenic 40.0%
TGCTCTGTGTATGTCTCTAT+CGG + chr2_3:28847314-28847333 None:intergenic 40.0%
!! TATTTTGAGTAAAGCCCGAG+AGG - chr2_3:28847388-28847407 Msa0286940:CDS 40.0%
GCACTTTGCATACCAATCAA+CGG + chr2_3:28847528-28847547 None:intergenic 40.0%
! CATCCAGAGTTCTAATCTTG+TGG - chr2_3:28847547-28847566 Msa0286940:CDS 40.0%
CATCCACAAGATTAGAACTC+TGG + chr2_3:28847553-28847572 None:intergenic 40.0%
! CAGAGTTCTAATCTTGTGGA+TGG - chr2_3:28847551-28847570 Msa0286940:CDS 40.0%
GTCAGTCTAATGCTTGTTCA+TGG - chr2_3:28847768-28847787 Msa0286940:CDS 40.0%
CTTGTTCATGGCTGATCAAT+TGG - chr2_3:28847780-28847799 Msa0286940:CDS 40.0%
ATGGCTGATCAATTGGAACA+AGG - chr2_3:28847787-28847806 Msa0286940:CDS 40.0%
TATGCCAGAAAACACGCAAA+AGG - chr2_3:28847838-28847857 Msa0286940:CDS 40.0%
! ATAGCCTTTTGCGTGTTTTC+TGG + chr2_3:28847845-28847864 None:intergenic 40.0%
GGCTATCTTGAGATTGAGAT+TGG - chr2_3:28847859-28847878 Msa0286940:CDS 40.0%
TTCCATCAAAGTCTGCTTCT+GGG + chr2_3:28847885-28847904 None:intergenic 40.0%
ATTCCATCAAAGTCTGCTTC+TGG + chr2_3:28847886-28847905 None:intergenic 40.0%
AGAAGCAGACTTTGATGGAA+TGG - chr2_3:28847885-28847904 Msa0286940:CDS 40.0%
AAGAGAACTGCATAGGACAT+TGG + chr2_3:28847957-28847976 None:intergenic 40.0%
! ATGCCACTTGTTGACAACTA+TGG - chr2_3:28848079-28848098 Msa0286940:CDS 40.0%
! TGCCACTTGTTGACAACTAT+GGG - chr2_3:28848080-28848099 Msa0286940:CDS 40.0%
CGTGTCACAGAAACAAGAAA+GGG - chr2_3:28848103-28848122 Msa0286940:CDS 40.0%
GTGTCACAGAAACAAGAAAG+GGG - chr2_3:28848104-28848123 Msa0286940:CDS 40.0%
TGTCACAGAAACAAGAAAGG+GGG - chr2_3:28848105-28848124 Msa0286940:CDS 40.0%
! AAATTGGCCTGCATAAGATG+AGG + chr2_3:28848230-28848249 None:intergenic 40.0%
TCTTATGCAGGCCAATTTAC+AGG - chr2_3:28848232-28848251 Msa0286940:CDS 40.0%
GCATTTGGAGGAGATATAAG+AGG + chr2_3:28848310-28848329 None:intergenic 40.0%
CTTATATCTCCTCCAAATGC+TGG - chr2_3:28848310-28848329 Msa0286940:CDS 40.0%
AGGAGGACTGTATCCATTAA+CGG + chr2_3:28848476-28848495 None:intergenic 40.0%
TTCTTAATTCGCTCGCCATT+GGG - chr2_3:28848505-28848524 Msa0286940:CDS 40.0%
TAGAAGCTCTCATCAATGAG+GGG + chr2_3:28848568-28848587 None:intergenic 40.0%
CATAGAAGCTCTCATCAATG+AGG + chr2_3:28848570-28848589 None:intergenic 40.0%
CTCATTGATGAGAGCTTCTA+TGG - chr2_3:28848568-28848587 Msa0286940:CDS 40.0%
CATTGATGAGAGCTTCTATG+GGG - chr2_3:28848570-28848589 Msa0286940:CDS 40.0%
TTTACATGCTTCCTCACAAC+TGG + chr2_3:28848644-28848663 None:intergenic 40.0%
GAAGACTTCTCCTGAGATAT+TGG + chr2_3:28848747-28848766 None:intergenic 40.0%
ACAGCATTAGAGATGAACCT+TGG - chr2_3:28848788-28848807 Msa0286940:CDS 40.0%
TAAAGACATCTGAAGGTCTC+AGG - chr2_3:28848812-28848831 Msa0286940:CDS 40.0%
CTGTATTGAATGATTCCGGA+TGG - chr2_3:28848848-28848867 Msa0286940:CDS 40.0%
TGATCAAGCTTACTTTGGTG+AGG - chr2_3:28848906-28848925 Msa0286940:CDS 40.0%
AATGAGGAGCTGAAGTTGTT+GGG - chr2_3:28848943-28848962 Msa0286940:CDS 40.0%
GTCAAAGAGGCCAAATTTGA+GGG + chr2_3:28849024-28849043 None:intergenic 40.0%
TGTCAAAGAGGCCAAATTTG+AGG + chr2_3:28849025-28849044 None:intergenic 40.0%
AAGCTGCTTGAAGACTAACA+TGG - chr2_3:28849125-28849144 Msa0286940:CDS 40.0%
AGCTGCTTGAAGACTAACAT+GGG - chr2_3:28849126-28849145 Msa0286940:CDS 40.0%
TTTCTTGTATGACCAGACGT+GGG - chr2_3:28849170-28849189 Msa0286940:CDS 40.0%
TGAACTGAAAAAAATCGGCG+TGG - chr2_3:28849272-28849291 Msa0286940:CDS 40.0%
TGCTTCTCTCTTCAAACAGA+AGG - chr2_3:28849326-28849345 Msa0286940:CDS 40.0%
TCAGAAGTGGCTGTATACTA+AGG - chr2_3:28849461-28849480 Msa0286940:CDS 40.0%
AAGTGGCTGTATACTAAGGT+TGG - chr2_3:28849465-28849484 Msa0286940:CDS 40.0%
TGTCACTGTCGTCAATGAAA+GGG + chr2_3:28849563-28849582 None:intergenic 40.0%
TTGTCACTGTCGTCAATGAA+AGG + chr2_3:28849564-28849583 None:intergenic 40.0%
AAGGAAGAACTGAAGATCCT+TGG - chr2_3:28849612-28849631 Msa0286940:CDS 40.0%
!! AAGATCCTTGGTGTTGTTAC+TGG - chr2_3:28849624-28849643 Msa0286940:CDS 40.0%
TCAATCCAGTAACAACACCA+AGG + chr2_3:28849632-28849651 None:intergenic 40.0%
AATTGGTTGAAGACACATGC+TGG - chr2_3:28849810-28849829 Msa0286940:CDS 40.0%
! TGAAGACACATGCTGGTTAT+AGG - chr2_3:28849817-28849836 Msa0286940:CDS 40.0%
TCAATAAAAGGCCCATCAGT+TGG + chr2_3:28849894-28849913 None:intergenic 40.0%
CAAAAAGAGACACAGCATGT+GGG + chr2_3:28850080-28850099 None:intergenic 40.0%
TCAAAGAGAGTTAAGGTGAC+TGG + chr2_3:28850114-28850133 None:intergenic 40.0%
GGTACTTGTCTGAATACAAC+TGG - chr2_3:28850160-28850179 Msa0286940:CDS 40.0%
TGAATACAACTGGAAACCTG+AGG - chr2_3:28850170-28850189 Msa0286940:CDS 40.0%
! CATGACCCTGATAAGCTTTT+TGG - chr2_3:28850270-28850289 Msa0286940:intron 40.0%
TCCTTTCTTTACCTTTGCCA+TGG - chr2_3:28850338-28850357 Msa0286940:intron 40.0%
TCCATGGCAAAGGTAAAGAA+AGG + chr2_3:28850342-28850361 None:intergenic 40.0%
GAATGAATGGGAGAGTTCAT+TGG - chr2_3:28850404-28850423 Msa0286940:intron 40.0%
!! ATGACAAGTGCTGGAAATTC+TGG - chr2_3:28850439-28850458 Msa0286940:intron 40.0%
AGCAAACTACCTGTAACAAC+AGG - chr2_3:28850519-28850538 Msa0286940:CDS 40.0%
TCTTTGCTTCCTGTTGTTAC+AGG + chr2_3:28850531-28850550 None:intergenic 40.0%
!! TCTGAAGAAGCTTTTTGAGC+AGG - chr2_3:28850599-28850618 Msa0286940:CDS 40.0%
! AGCAGGAGAAGATTTTTGTG+TGG - chr2_3:28850616-28850635 Msa0286940:CDS 40.0%
GAATCTTCCTTGCTGAATGA+TGG - chr2_3:28850738-28850757 Msa0286940:intron 40.0%
TTCAACACCATCATTCAGCA+AGG + chr2_3:28850748-28850767 None:intergenic 40.0%
! GCTGAATGATGGTGTTGAAA+TGG - chr2_3:28850749-28850768 Msa0286940:intron 40.0%
TGCTTGTTCTAGCCTGAAAA+TGG - chr2_3:28850839-28850858 Msa0286940:intron 40.0%
!! TCTTGTCTGGTTCCATTTTC+AGG + chr2_3:28850854-28850873 None:intergenic 40.0%
TGAAAATGGAACCAGACAAG+AGG - chr2_3:28850853-28850872 Msa0286940:intron 40.0%
AGACTATAGTTAACCGTGAC+CGG + chr2_3:28850930-28850949 None:intergenic 40.0%
TAGTCTATCACTGTCATCAG+GGG - chr2_3:28850944-28850963 Msa0286940:intron 40.0%
AAGATGACAAAATGGTTCGC+TGG - chr2_3:28850982-28851001 Msa0286940:intron 40.0%
AGATGACAAAATGGTTCGCT+GGG - chr2_3:28850983-28851002 Msa0286940:intron 40.0%
CAACTTCTGGATGAAAAGCT+TGG + chr2_3:28851021-28851040 None:intergenic 40.0%
! CAAGCTTTTCATCCAGAAGT+TGG - chr2_3:28851019-28851038 Msa0286940:intron 40.0%
TATTTCAGTGCATTTCCCTG+CGG + chr2_3:28851050-28851069 None:intergenic 40.0%
CCAACGTGATCAATTCAGAT+AGG + chr2_3:28851139-28851158 None:intergenic 40.0%
CCTATCTGAATTGATCACGT+TGG - chr2_3:28851136-28851155 Msa0286940:intron 40.0%
GAACAAAGGCCATGTTGTAA+AGG + chr2_3:28851466-28851485 None:intergenic 40.0%
GTACCAGCTGTGAAGAAGAA+TGG + chr2_3:28845014-28845033 None:intergenic 45.0%
GCTTCACTCCCTCATTATAG+TGG + chr2_3:28845976-28845995 None:intergenic 45.0%
GGATCTTCCAACACTGCATA+TGG + chr2_3:28846107-28846126 None:intergenic 45.0%
GCTCCTATTGCCTTTCTTTG+TGG + chr2_3:28846128-28846147 None:intergenic 45.0%
AAGAAAGGCAATAGGAGCAG+TGG - chr2_3:28846130-28846149 Msa0286940:CDS 45.0%
CTTGTCCACATTGCAGTCTT+GGG - chr2_3:28846499-28846518 Msa0286940:intron 45.0%
TGCTTTATGTCAGCAAGGGT+TGG + chr2_3:28846555-28846574 None:intergenic 45.0%
GGCAAGACAATGGTTGTAGT+TGG + chr2_3:28846603-28846622 None:intergenic 45.0%
! AAGAGTGCAGCTACTACATG+TGG - chr2_3:28846862-28846881 Msa0286940:CDS 45.0%
! ACCACATTTTCTGACCTGAC+CGG + chr2_3:28846900-28846919 None:intergenic 45.0%
!! TGAAGAATGGGTTGTGACAC+TGG - chr2_3:28846938-28846957 Msa0286940:CDS 45.0%
CTATGAAGCCTCTCCTGATT+TGG + chr2_3:28846969-28846988 None:intergenic 45.0%
CAAATCAGGAGAGGCTTCAT+AGG - chr2_3:28846967-28846986 Msa0286940:CDS 45.0%
AATCAGGAGAGGCTTCATAG+GGG - chr2_3:28846969-28846988 Msa0286940:CDS 45.0%
ATAGGGGTAAAAGCTCACCA+GGG - chr2_3:28846985-28847004 Msa0286940:CDS 45.0%
GAGAATTGTCTCCCTAGATG+AGG + chr2_3:28847081-28847100 None:intergenic 45.0%
ATGTGTTCCATCGGCCTTTA+TGG - chr2_3:28847133-28847152 Msa0286940:CDS 45.0%
AATGCATCCATAAAGGCCGA+TGG + chr2_3:28847143-28847162 None:intergenic 45.0%
ACTTGATACCGGAGCTTGAT+CGG + chr2_3:28847186-28847205 None:intergenic 45.0%
TCAAGCTCCGGTATCAAGTT+TGG - chr2_3:28847187-28847206 Msa0286940:CDS 45.0%
ATGGCGAACTTTCAATGGGA+AGG + chr2_3:28847229-28847248 None:intergenic 45.0%
!! CAGAAGCACTTCTATAAGCC+TGG - chr2_3:28847332-28847351 Msa0286940:CDS 45.0%
! ATAAGCCTGGTGACGTTAGT+AGG - chr2_3:28847345-28847364 Msa0286940:CDS 45.0%
CAAGTACACTTCTTCCTCTC+GGG + chr2_3:28847405-28847424 None:intergenic 45.0%
GCAAGTACACTTCTTCCTCT+CGG + chr2_3:28847406-28847425 None:intergenic 45.0%
! ACCTATCTTCTCATGATGGG+AGG - chr2_3:28847429-28847448 Msa0286940:CDS 45.0%
TCCTCCCATCATGAGAAGAT+AGG + chr2_3:28847433-28847452 None:intergenic 45.0%
! GAAGTATTTGTCAAAGCGGG+AGG - chr2_3:28848036-28848055 Msa0286940:CDS 45.0%
GCGTGTCACAGAAACAAGAA+AGG - chr2_3:28848102-28848121 Msa0286940:CDS 45.0%
TGCCTGCAAATGTGAGCAAA+TGG - chr2_3:28848134-28848153 Msa0286940:CDS 45.0%
GCCTGCAAATGTGAGCAAAT+GGG - chr2_3:28848135-28848154 Msa0286940:CDS 45.0%
ACAGCTGAAAACCCAGCATT+TGG + chr2_3:28848325-28848344 None:intergenic 45.0%
! ATTCGGAATCTGAAGCACAG+AGG - chr2_3:28848391-28848410 Msa0286940:CDS 45.0%
GTTCTTAATTCGCTCGCCAT+TGG - chr2_3:28848504-28848523 Msa0286940:CDS 45.0%
CCTTCAGATGTCTTTAGCCA+AGG + chr2_3:28848808-28848827 None:intergenic 45.0%
CCTTGGCTAAAGACATCTGA+AGG - chr2_3:28848805-28848824 Msa0286940:CDS 45.0%
!! TTGCGATGCTACTTTCCATC+CGG + chr2_3:28848866-28848885 None:intergenic 45.0%
CAATGAGGAGCTGAAGTTGT+TGG - chr2_3:28848942-28848961 Msa0286940:CDS 45.0%
AAGTTGTTGGGAGTGGTAGT+TGG - chr2_3:28848955-28848974 Msa0286940:CDS 45.0%
GTTTCTTGTATGACCAGACG+TGG - chr2_3:28849169-28849188 Msa0286940:CDS 45.0%
TTCTTGTATGACCAGACGTG+GGG - chr2_3:28849171-28849190 Msa0286940:CDS 45.0%
!!! ATCGGCGTGGTTGTTGATTT+TGG - chr2_3:28849285-28849304 Msa0286940:CDS 45.0%
! GCATTTTATATGGTCCGGAG+TGG - chr2_3:28849511-28849530 Msa0286940:CDS 45.0%
! TAATGGTGGAGGGATCTGAA+GGG + chr2_3:28849692-28849711 None:intergenic 45.0%
! CTTTCAGGAGTAATGGTGGA+GGG + chr2_3:28849702-28849721 None:intergenic 45.0%
ACTTTCAGGAGTAATGGTGG+AGG + chr2_3:28849703-28849722 None:intergenic 45.0%
CACACTTTCAGGAGTAATGG+TGG + chr2_3:28849706-28849725 None:intergenic 45.0%
AACAGCAAACACATCTCTGG+AGG + chr2_3:28849843-28849862 None:intergenic 45.0%
GCAAAAAGAGACACAGCATG+TGG + chr2_3:28850081-28850100 None:intergenic 45.0%
! TTCTTGGCAGCTTTATCCTC+AGG + chr2_3:28850189-28850208 None:intergenic 45.0%
GTACGATGCATTCTTCAGAG+AGG + chr2_3:28850251-28850270 None:intergenic 45.0%
AATTGTCGCATGACAAGTGC+TGG - chr2_3:28850430-28850449 Msa0286940:intron 45.0%
CAGAGAAGAAACTTTCGGAG+AGG - chr2_3:28850493-28850512 Msa0286940:CDS 45.0%
! TTTTGTGTGGTATCCTCAGC+AGG - chr2_3:28850629-28850648 Msa0286940:CDS 45.0%
! AAGAGGCATGAAGCTGTTCA+AGG - chr2_3:28850870-28850889 Msa0286940:intron 45.0%
TCTCAACCTGAGCTTCATTG+AGG - chr2_3:28850896-28850915 Msa0286940:intron 45.0%
GACTATAGTTAACCGTGACC+GGG + chr2_3:28850929-28850948 None:intergenic 45.0%
ACAAAATGGTTCGCTGGGAA+AGG - chr2_3:28850988-28851007 Msa0286940:intron 45.0%
GTGATCAATTCAGATAGGGC+AGG + chr2_3:28851134-28851153 None:intergenic 45.0%
TGCAGAATCCTCAGTCAGAA+GGG + chr2_3:28851262-28851281 None:intergenic 45.0%
ATGCAGAATCCTCAGTCAGA+AGG + chr2_3:28851263-28851282 None:intergenic 45.0%
CCAAGACTGCAATGTGGACA+AGG + chr2_3:28846501-28846520 None:intergenic 50.0%
CCTTGTCCACATTGCAGTCT+TGG - chr2_3:28846498-28846517 Msa0286940:intron 50.0%
TTGACCTTATCCGGCTTCAG+GGG + chr2_3:28846624-28846643 None:intergenic 50.0%
GTTGACCTTATCCGGCTTCA+GGG + chr2_3:28846625-28846644 None:intergenic 50.0%
CACACTACATCTCTCCACAG+AGG - chr2_3:28846821-28846840 Msa0286940:CDS 50.0%
GGAAGCAAAAGTTTCCGGTC+AGG - chr2_3:28846883-28846902 Msa0286940:CDS 50.0%
TCCGGTCAGGTCAGAAAATG+TGG - chr2_3:28846896-28846915 Msa0286940:CDS 50.0%
!! AAGCCTCTCCTGATTTGGGA+AGG + chr2_3:28846964-28846983 None:intergenic 50.0%
CATAGGGGTAAAAGCTCACC+AGG - chr2_3:28846984-28847003 Msa0286940:CDS 50.0%
TAGGGGTAAAAGCTCACCAG+GGG - chr2_3:28846986-28847005 Msa0286940:CDS 50.0%
GGAAGAAATGCATAGACCCC+TGG + chr2_3:28847005-28847024 None:intergenic 50.0%
TTGTCTCCCTAGATGAGGCA+AGG + chr2_3:28847076-28847095 None:intergenic 50.0%
TGTAGGATCCGATCAAGCTC+CGG - chr2_3:28847175-28847194 Msa0286940:CDS 50.0%
GTAGGCTGCTGTCTGAATTC+TGG - chr2_3:28847363-28847382 Msa0286940:CDS 50.0%
GAATGCACACAGCACTATGC+AGG - chr2_3:28847716-28847735 Msa0286940:CDS 50.0%
CGCCCATAGTTGTCAACAAG+TGG + chr2_3:28848085-28848104 None:intergenic 50.0%
GCCCATTTGCTCACATTTGC+AGG + chr2_3:28848139-28848158 None:intergenic 50.0%
GCAGGCCAATTTACAGGTTC+CGG - chr2_3:28848238-28848257 Msa0286940:CDS 50.0%
CAGGCCAATTTACAGGTTCC+GGG - chr2_3:28848239-28848258 Msa0286940:CDS 50.0%
GCTTCCCGGAACCTGTAAAT+TGG + chr2_3:28848246-28848265 None:intergenic 50.0%
GCTGAAAACCCAGCATTTGG+AGG + chr2_3:28848322-28848341 None:intergenic 50.0%
TGGAGTGATGTCCAGTTGTG+AGG - chr2_3:28848630-28848649 Msa0286940:CDS 50.0%
CAGGAGAAGTCTTCTCCCAT+TGG - chr2_3:28848753-28848772 Msa0286940:CDS 50.0%
TTTGGCCTCTTTGACAGCTG+AGG - chr2_3:28849029-28849048 Msa0286940:CDS 50.0%
AACAGCCTCAGCTGTCAAAG+AGG + chr2_3:28849037-28849056 None:intergenic 50.0%
TTCATGTTGCAGGCTGCTGA+AGG - chr2_3:28849392-28849411 Msa0286940:CDS 50.0%
TCATGTTGCAGGCTGCTGAA+GGG - chr2_3:28849393-28849412 Msa0286940:CDS 50.0%
CTGGATTGAAACATGGCGTG+AGG - chr2_3:28849643-28849662 Msa0286940:CDS 50.0%
! GTAATGGTGGAGGGATCTGA+AGG + chr2_3:28849693-28849712 None:intergenic 50.0%
GTCACCACTGACCTAGAGAA+AGG - chr2_3:28849972-28849991 Msa0286940:CDS 50.0%
GCATCCTTTCTCTAGGTCAG+TGG + chr2_3:28849979-28849998 None:intergenic 50.0%
!! GCAAGGAGCATCCTTTCTCT+AGG + chr2_3:28849986-28850005 None:intergenic 50.0%
AAAGGATGCTCCTTGCTTGC+AGG - chr2_3:28849990-28850009 Msa0286940:CDS 50.0%
CGCTGTCAGAGAGAATCTCA+AGG + chr2_3:28850019-28850038 None:intergenic 50.0%
! TGGATTCCCAATGGCACTGA+AGG - chr2_3:28850213-28850232 Msa0286940:intron 50.0%
! ATTCCCAATGGCACTGAAGG+TGG - chr2_3:28850216-28850235 Msa0286940:intron 50.0%
! TGTCCACCTTCAGTGCCATT+GGG + chr2_3:28850222-28850241 None:intergenic 50.0%
! AGCTCTGACTTCCATGGCAA+AGG + chr2_3:28850352-28850371 None:intergenic 50.0%
!! GGGTTTAGCTCTGACTTCCA+TGG + chr2_3:28850358-28850377 None:intergenic 50.0%
TGGTATCCTCAGCAGGACTT+TGG - chr2_3:28850636-28850655 Msa0286940:CDS 50.0%
GGTATCCTCAGCAGGACTTT+GGG - chr2_3:28850637-28850656 Msa0286940:CDS 50.0%
ACAGCTTCATGCCTCTTGTC+TGG + chr2_3:28850867-28850886 None:intergenic 50.0%
CCTTTGCCTCAATGAAGCTC+AGG + chr2_3:28850905-28850924 None:intergenic 50.0%
CCTGAGCTTCATTGAGGCAA+AGG - chr2_3:28850902-28850921 Msa0286940:intron 50.0%
CTTCATTGAGGCAAAGGTCC+CGG - chr2_3:28850908-28850927 Msa0286940:intron 50.0%
GAATCCTCAGTCAGAAGGGA+AGG + chr2_3:28851258-28851277 None:intergenic 50.0%
GGCTTCTCCTCAACCCATTC+AGG + chr2_3:28846534-28846553 None:intergenic 55.0%
CATTGTCTTGCCCCTGAAGC+CGG - chr2_3:28846611-28846630 Msa0286940:CDS 55.0%
GGTTGACCTTATCCGGCTTC+AGG + chr2_3:28846626-28846645 None:intergenic 55.0%
!! GACACTGGCCTTCCCAAATC+AGG - chr2_3:28846953-28846972 Msa0286940:CDS 55.0%
TGGCCTTCCCAAATCAGGAG+AGG - chr2_3:28846958-28846977 Msa0286940:CDS 55.0%
AGCAGCCTACTAACGTCACC+AGG + chr2_3:28847353-28847372 None:intergenic 55.0%
GGCCCAGAAGCAGACTTTGA+TGG - chr2_3:28847880-28847899 Msa0286940:CDS 55.0%
GAAGGTCTCAGGTCTCCTGT+TGG - chr2_3:28848823-28848842 Msa0286940:CDS 55.0%
GGAGCTGAAGTTGTTGGGAG+TGG - chr2_3:28848948-28848967 Msa0286940:CDS 55.0%
CCAAAATACAGCCCCACGTC+TGG + chr2_3:28849185-28849204 None:intergenic 55.0%
! CCAGACGTGGGGCTGTATTT+TGG - chr2_3:28849182-28849201 Msa0286940:CDS 55.0%
CATGTTGCAGGCTGCTGAAG+GGG - chr2_3:28849394-28849413 Msa0286940:CDS 55.0%
CTCAAGGTGACCTGCAAGCA+AGG + chr2_3:28850003-28850022 None:intergenic 55.0%
CTGTCCACCTTCAGTGCCAT+TGG + chr2_3:28850223-28850242 None:intergenic 55.0%
! ATGGCACTGAAGGTGGACAG+TGG - chr2_3:28850223-28850242 Msa0286940:intron 55.0%
! TGGCACTGAAGGTGGACAGT+GGG - chr2_3:28850224-28850243 Msa0286940:intron 55.0%
CAGAAGTTGGATGAGCCGCA+GGG - chr2_3:28851032-28851051 Msa0286940:intron 55.0%
CAGAAGGGAAGGCAGAACTG+AGG + chr2_3:28851247-28851266 None:intergenic 55.0%
TCTGCCTTCCCTTCTGACTG+AGG - chr2_3:28851251-28851270 Msa0286940:intron 55.0%
CGGCTTCAGGGGCAAGACAA+TGG + chr2_3:28846613-28846632 None:intergenic 60.0%
CTTGCCCCTGAAGCCGGATA+AGG - chr2_3:28846617-28846636 Msa0286940:CDS 60.0%
! GAGGAGTGCACCTACCAGAG+AGG - chr2_3:28848410-28848429 Msa0286940:CDS 60.0%
GAAGGCCCAAAGTCCTGCTG+AGG + chr2_3:28850645-28850664 None:intergenic 60.0%
TGAGGCAAAGGTCCCGGTCA+CGG - chr2_3:28850914-28850933 Msa0286940:intron 60.0%
CCTGCGGCTCATCCAACTTC+TGG + chr2_3:28851034-28851053 None:intergenic 60.0%
CCAGAAGTTGGATGAGCCGC+AGG - chr2_3:28851031-28851050 Msa0286940:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 28844982 28851639 28844982 ID=Msa0286940;Name=Msa0286940
chr2_3 mRNA 28844982 28851639 28844982 ID=Msa0286940-mRNA-1;Parent=Msa0286940;Name=Msa0286940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=75|1|1|1|0.75|0.6|5|339|1708
chr2_3 exon 28844982 28845127 28844982 ID=Msa0286940-mRNA-1:exon:10164;Parent=Msa0286940-mRNA-1
chr2_3 exon 28845157 28846460 28845157 ID=Msa0286940-mRNA-1:exon:10163;Parent=Msa0286940-mRNA-1
chr2_3 exon 28846561 28850206 28846561 ID=Msa0286940-mRNA-1:exon:10162;Parent=Msa0286940-mRNA-1
chr2_3 exon 28850452 28850662 28850452 ID=Msa0286940-mRNA-1:exon:10161;Parent=Msa0286940-mRNA-1
chr2_3 exon 28851406 28851639 28851406 ID=Msa0286940-mRNA-1:exon:10160;Parent=Msa0286940-mRNA-1
chr2_3 five_prime_UTR 28851565 28851639 28851565 ID=Msa0286940-mRNA-1:five_prime_utr;Parent=Msa0286940-mRNA-1
chr2_3 CDS 28851406 28851564 28851406 ID=Msa0286940-mRNA-1:cds;Parent=Msa0286940-mRNA-1
chr2_3 CDS 28850452 28850662 28850452 ID=Msa0286940-mRNA-1:cds;Parent=Msa0286940-mRNA-1
chr2_3 CDS 28846561 28850206 28846561 ID=Msa0286940-mRNA-1:cds;Parent=Msa0286940-mRNA-1
chr2_3 CDS 28845350 28846460 28845350 ID=Msa0286940-mRNA-1:cds;Parent=Msa0286940-mRNA-1
chr2_3 three_prime_UTR 28845157 28845349 28845157 ID=Msa0286940-mRNA-1:three_prime_utr;Parent=Msa0286940-mRNA-1
chr2_3 three_prime_UTR 28844982 28845127 28844982 ID=Msa0286940-mRNA-1:three_prime_utr;Parent=Msa0286940-mRNA-1
Gene Sequence

>Msa0286940

ATGGCTACACCAAAAGAGCATGTTGAAGAAATACGAAGGACAAAGTTCTCTATTGGTGGGAATCCTAATCCTTTGACTGAGGATCTTCATCACGCTGTTAAGAATCTCTCTGCCGAACTTTATGCAAAAGATGTCCATTTCCTAATGGAGCTCATACAAAATGCTGAAGATAACCACTATAATGAGGGAGTGAAGCCAGCACTTGAGTTTGTCATAACTTCTGATGACATTACTGCTACTGGTGCTCCAGCCACATTACTTATTTTCAATAATGAAAAGGGTTTCTCTCCAAAAAACATTGAGTCCATATGCAGTGTTGGAAGATCCACAAAGAAAGGCAATAGGAGCAGTGGTTACATAGGAGAGAAAGGAATTGGTTTCAAGAGTGTGTTTCTGGTTACCATGCAGCCGTATATTTTTAGCAATGGATATCAGATAAGGTTCAATGAGAAGCCTTGTCCACATTGCAGTCTTGGGTATATAGTTCCTGAATGGGTTGAGGAGAAGCCAACCCTTGCTGACATAAAGCAGATATATGGTGCTGGTAAAGACCTTCCAACTACAACCATTGTCTTGCCCCTGAAGCCGGATAAGGTCAACCCTGTTAAACAGCAGCTTTCAAGCGTTCATCCCGAAGTCCTTTTGTTTCTTACAAAAATCAGACACCTTTCGGTTAGAGAAGTTACTGAAAATCCCACACAGAACACTATAACTGCTGTATCTATTTCAAGCGAGATTAACTTTGTGACAAGAAAAAATATGAATGCTGAGTCTTACACACTACATCTCTCCACAGAGGAAAATAGTAATGCTGAGAAAGAGTGCAGCTACTACATGTGGAAGCAAAAGTTTCCGGTCAGGTCAGAAAATGTGGTTGAAAGGAGAACAGATGTTGAAGAATGGGTTGTGACACTGGCCTTCCCAAATCAGGAGAGGCTTCATAGGGGTAAAAGCTCACCAGGGGTCTATGCATTTCTTCCTACAGAGATGGTCACTAATTTTCCTTTCATTATTCAAGCAGATTTTGTCCTTGCCTCATCTAGGGAGACAATTCTCTTGGATAATAAATGGAACCAAGGGATACTTGAATGTGTTCCATCGGCCTTTATGGATGCATTCAAAACACTTGTTGTAGGATCCGATCAAGCTCCGGTATCAAGTTTGGCTCGTATGTTCAAGTTCCTTCCCATTGAAAGTTCGCCATTTGAGAAGTTTAATCATGTGAGGGACAAAATCAAAGCAAAGTTGGTTAATGAAAATATTGTTCCGATAGAGACATACACAGAGCAGAAGCACTTCTATAAGCCTGGTGACGTTAGTAGGCTGCTGTCTGAATTCTGGAATATTTTGAGTAAAGCCCGAGAGGAAGAAGTGTACTTGCTTAACCTATCTTCTCATGATGGGAGGAAGATCTTGAGTTCTTCGTTTGATAAAAGTGAGTATGATAATGTACTCAACTTTTTAGGGGTTAAACTAGTGACCGTTGATTGGTATGCAAAGTGCATCCAGAGTTCTAATCTTGTGGATGGTGTATCAGAAGATCTCTATCTTAAACTTTTATTGTTTGTTGCTAATAACTGGTCTTCAAGATTTAAGGGAACAAACATTAATAGTATTCCATTGATAAAATATGTGGCTTCTGATGGAACTCTATCCTCTTTCAGTCTTTATGAATGCACACAGCACTATGCAGGTGCGAAGCGAGTAGTAATGACAGACTCAAGTCAGTCTAATGCTTGTTCATGGCTGATCAATTGGAACAAGGAATTTTCATGTGCAGGAAACCGGTTTTATATGCCAGAAAACACGCAAAAGGCTATCTTGAGATTGAGATTGGCCCAGAAGCAGACTTTGATGGAATGGCTTGAAAATGACGTTTCTGTTACTAATTTGAACGTGTACACTTTTGCCAATGTCCTATGCAGTTCTCTTAAAAATAATAGCAAACATGCCATTGCATATGCTCATTTTTTGTACCACTCTTTATCAATGAAGTATTTGTCAAAGCGGGAGGTTGATAGTCTATGTAGTTCTATGCCACTTGTTGACAACTATGGGCGTGTCACAGAAACAAGAAAGGGGGTTCTTGTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGTTTCTAATCCTTGGAGGAATGAAAATTATGTTGAGCTCGGAAAGGAGTACCTAAATTCCTCATCTTATGCAGGCCAATTTACAGGTTCCGGGAAGCTTATTAATTTTCTCACAACTCATGTTGGAGCTTCTGACATTCCTCTTATATCTCCTCCAAATGCTGGGTTTTCAGCTGTTGATACACCACTTACCAAAAACAATGCCTTTTTGCTTTTGGATTGGATTCGGAATCTGAAGCACAGAGGAGTGCACCTACCAGAGAGGTTTTTGAAATGTATAAAAGATGGCAGCTGGCTTAAAGTTTCCGTTAATGGATACAGTCCTCCTTCAAAGTCGTTCTTAATTCGCTCGCCATTGGGAAAAATCTTGCAAAGTGGTTCGGTTCTTGTTGATATACCCCTCATTGATGAGAGCTTCTATGGGGATAGAATAAACAAGTATGAAGAGGAGTTGAAAACAATTGGAGTGATGTCCAGTTGTGAGGAAGCATGTAAATTCATTGGAAGAGAACTGATGTCTCGCGCTTCTTCCTTCACTTTAAGTAAGAATCATGTCCTTTTGATGCTTAAATTCATCCAATATCTCAGGAGAAGTCTTCTCCCATTGGACAAATTTGTGAACAGCATTAGAGATGAACCTTGGCTAAAGACATCTGAAGGTCTCAGGTCTCCTGTTGGATCTGTATTGAATGATTCCGGATGGAAAGTAGCATCGCAAATTAGTAATATCCCTTTTATTGATCAAGCTTACTTTGGTGAGGAAATATATAGCTACAATGAGGAGCTGAAGTTGTTGGGAGTGGTAGTTGGCTTAAATAGAAATTACCAAATTGTTATCAAGCACTTAAAATCACCCTCAAATTTGGCCTCTTTGACAGCTGAGGCTGTTCTTTTGATAATGGAATGCATCAAATTCTTGGATGACCCTAGTAAAATCTTAAATTCATTGAAGGGAACAAGCTGCTTGAAGACTAACATGGGTTTCAAAATACCAAGTGAATGTTTCTTGTATGACCAGACGTGGGGCTGTATTTTGGATGTATTCAATGCCCTTCCTGTGATTGATCATAAATTCTATGGAGATAATATTTTCTCTTACAAAAATGAACTGAAAAAAATCGGCGTGGTTGTTGATTTTGGAGATGCTATCAACAGATTTGCTTCTCTCTTCAAACAGAAGGCATCACAAGCTTCATTTAAACAAGAAAATGTCATGTCATTTCTTTCATGTTGCAGGCTGCTGAAGGGGACTGTTTATAGATTTCCTTCTGATTTTTCTACCATTATACATAATCAGAAGTGGCTGTATACTAAGGTTGGTTGTTATGCGTGCCCAAAACAATGCATTTTATATGGTCCGGAGTGGAAATCTATATCTTCAATTACTTGTCTCCCTTTCATTGACGACAGTGACAAATTTTATGGTACGGCAATACATGAATACAAGGAAGAACTGAAGATCCTTGGTGTTGTTACTGGATTGAAACATGGCGTGAGGTTTGTGCCTAAATGTCTTAATTTCCCTTCAGATCCCTCCACCATTACTCCTGAAAGTGTGTTTTCTTTGCTGGAATGCATCCGAAGTTTATATGAAGAGCATAAGCTTTCCATTGATGATGAGTTCAGAAAGAGATTGTCCAGAAATTGGTTGAAGACACATGCTGGTTATAGGCCTCCAGAGATGTGTTTGCTGTTTAATTCCAAGTGGAGTTCTTTCTTTAATCCAACTGATGGGCCTTTTATTGATGCAAATTTTTATGGACGTAAAATAGCATCTTTCCAGAAAGAATTCAATGTAATCGGTGTCACCACTGACCTAGAGAAAGGATGCTCCTTGCTTGCAGGTCACCTTGAGATTCTCTCTGACAGCGAGACTATTGTCAAAATATACAGGTACTTGTCTGAATACAACTGGAAACCTGAGGATAAAGCTGCCAAGAAAATTTGGATTCCCAATGGCACTGAAGGTGGACAGTGGGTCCTCTCTGAAGAATGCATCGTACATGACCCTGATAAGCTTTTTGGTTTAAAATTCTATGTTCTTGAAGATATCTATGATAGGAAGCTTTTTCCTTTCTTTACCTTTGCCATGGAAGTCAGAGCTAAACCCTCACTTGATGATTATGTTGATCTTTGGAATGAATGGGAGAGTTCATTGGAAGAATTGTCGCATGACAAGTGCTGGAAATTCTGGATGTTTATCCTGAAACATTTGGGCACAAATACAGAGAAGAAACTTTCGGAGAGGTTGAGCAAACTACCTGTAACAACAGGAAGCAAAGAGATATTTCTGCTGGACAAGAAAGATGTTTTTATACCTGATAACCTTCATCTGAAGAAGCTTTTTGAGCAGGAGAAGATTTTTGTGTGGTATCCTCAGCAGGACTTTGGGCCTTCTTCCATTTCTAAGTTATATGACATCTACAGAAAAATTGGTGCTCGAAATATATCTGAATCACTATGCAAAGAAGAATCTTCCTTGCTGAATGATGGTGTTGAAATGGTGCAAGTTGATCATAATGATATTCTTTTCAACTTAAAAGGTTTGATTAAGCTGATTCTCGGCTTTCTTGCTTGTTCTAGCCTGAAAATGGAACCAGACAAGAGGCATGAAGCTGTTCAAGGTCTTCTCAACCTGAGCTTCATTGAGGCAAAGGTCCCGGTCACGGTTAACTATAGTCTATCACTGTCATCAGGGGACATCGTTACAAAGAAAGATGACAAAATGGTTCGCTGGGAAAGGCTAAGTTCCAAGCTTTTCATCCAGAAGTTGGATGAGCCGCAGGGAAATGCACTGAAATATGCCACATATTTCTCTGAAACAATATCAGAAGGTGTTTTGTGTGAGAATCATGATTATGTTCCTGCCCTATCTGAATTGATCACGTTGGGTTTTGTGCTGAAATTCAAGAATGAAGATATTGAATTTCTGATGGAGTCCAAAAACATGCAGATTTTCTGTGAGGACGAGAAGCTCCTCAGTTCTGCCTTCCCTTCTGACTGA

Protein sequence

>Msa0286940

MATPKEHVEEIRRTKFSIGGNPNPLTEDLHHAVKNLSAELYAKDVHFLMELIQNAEDNHYNEGVKPALEFVITSDDITATGAPATLLIFNNEKGFSPKNIESICSVGRSTKKGNRSSGYIGEKGIGFKSVFLVTMQPYIFSNGYQIRFNEKPCPHCSLGYIVPEWVEEKPTLADIKQIYGAGKDLPTTTIVLPLKPDKVNPVKQQLSSVHPEVLLFLTKIRHLSVREVTENPTQNTITAVSISSEINFVTRKNMNAESYTLHLSTEENSNAEKECSYYMWKQKFPVRSENVVERRTDVEEWVVTLAFPNQERLHRGKSSPGVYAFLPTEMVTNFPFIIQADFVLASSRETILLDNKWNQGILECVPSAFMDAFKTLVVGSDQAPVSSLARMFKFLPIESSPFEKFNHVRDKIKAKLVNENIVPIETYTEQKHFYKPGDVSRLLSEFWNILSKAREEEVYLLNLSSHDGRKILSSSFDKSEYDNVLNFLGVKLVTVDWYAKCIQSSNLVDGVSEDLYLKLLLFVANNWSSRFKGTNINSIPLIKYVASDGTLSSFSLYECTQHYAGAKRVVMTDSSQSNACSWLINWNKEFSCAGNRFYMPENTQKAILRLRLAQKQTLMEWLENDVSVTNLNVYTFANVLCSSLKNNSKHAIAYAHFLYHSLSMKYLSKREVDSLCSSMPLVDNYGRVTETRKGVLVPANVSKWADLIVSNPWRNENYVELGKEYLNSSSYAGQFTGSGKLINFLTTHVGASDIPLISPPNAGFSAVDTPLTKNNAFLLLDWIRNLKHRGVHLPERFLKCIKDGSWLKVSVNGYSPPSKSFLIRSPLGKILQSGSVLVDIPLIDESFYGDRINKYEEELKTIGVMSSCEEACKFIGRELMSRASSFTLSKNHVLLMLKFIQYLRRSLLPLDKFVNSIRDEPWLKTSEGLRSPVGSVLNDSGWKVASQISNIPFIDQAYFGEEIYSYNEELKLLGVVVGLNRNYQIVIKHLKSPSNLASLTAEAVLLIMECIKFLDDPSKILNSLKGTSCLKTNMGFKIPSECFLYDQTWGCILDVFNALPVIDHKFYGDNIFSYKNELKKIGVVVDFGDAINRFASLFKQKASQASFKQENVMSFLSCCRLLKGTVYRFPSDFSTIIHNQKWLYTKVGCYACPKQCILYGPEWKSISSITCLPFIDDSDKFYGTAIHEYKEELKILGVVTGLKHGVRFVPKCLNFPSDPSTITPESVFSLLECIRSLYEEHKLSIDDEFRKRLSRNWLKTHAGYRPPEMCLLFNSKWSSFFNPTDGPFIDANFYGRKIASFQKEFNVIGVTTDLEKGCSLLAGHLEILSDSETIVKIYRYLSEYNWKPEDKAAKKIWIPNGTEGGQWVLSEECIVHDPDKLFGLKFYVLEDIYDRKLFPFFTFAMEVRAKPSLDDYVDLWNEWESSLEELSHDKCWKFWMFILKHLGTNTEKKLSERLSKLPVTTGSKEIFLLDKKDVFIPDNLHLKKLFEQEKIFVWYPQQDFGPSSISKLYDIYRKIGARNISESLCKEESSLLNDGVEMVQVDHNDILFNLKGLIKLILGFLACSSLKMEPDKRHEAVQGLLNLSFIEAKVPVTVNYSLSLSSGDIVTKKDDKMVRWERLSSKLFIQKLDEPQGNALKYATYFSETISEGVLCENHDYVPALSELITLGFVLKFKNEDIEFLMESKNMQIFCEDEKLLSSAFPSD*