Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325540 | XP_013446794.1 | 95.660 | 1705 | 67 | 3 | 1 | 1702 | 1 | 1701 | 0.0 | 3320 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325540 | sp|F4JTS8|NOV_ARATH | 32.908 | 392 | 198 | 16 | 8 | 376 | 1162 | 1511 | 1.10e-35 | 153 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017090 | Msa0325540 | 0.817645 | 2.962483e-52 | -8.615850e-47 |
Msa0065370 | Msa0325540 | 0.837803 | 4.188758e-57 | -8.615850e-47 |
Msa0102110 | Msa0325540 | 0.839706 | 1.349311e-57 | -8.615850e-47 |
Msa0110680 | Msa0325540 | 0.814940 | 1.192760e-51 | -8.615850e-47 |
Msa0146820 | Msa0325540 | 0.818945 | 1.503969e-52 | -8.615850e-47 |
Msa0156990 | Msa0325540 | 0.828968 | 6.691727e-55 | -8.615850e-47 |
Msa0205440 | Msa0325540 | 0.949223 | 1.965506e-107 | -8.615850e-47 |
Msa0230800 | Msa0325540 | 0.808208 | 3.466831e-50 | -8.615850e-47 |
Msa0230870 | Msa0325540 | 0.828401 | 9.176752e-55 | -8.615850e-47 |
Msa0248680 | Msa0325540 | 0.931740 | 2.412967e-94 | -8.615850e-47 |
Msa0286940 | Msa0325540 | 0.938742 | 4.065380e-99 | -8.615850e-47 |
Msa0292760 | Msa0325540 | 0.800298 | 1.538716e-48 | -8.615850e-47 |
Msa0325540 | Msa0342840 | 0.823433 | 1.388839e-53 | -8.615850e-47 |
Msa0325540 | Msa0451170 | 0.816546 | 5.230377e-52 | -8.615850e-47 |
Msa0325540 | Msa0486400 | 0.812992 | 3.206227e-51 | -8.615850e-47 |
Msa0325540 | Msa0562560 | 0.816797 | 4.594148e-52 | -8.615850e-47 |
Msa0325540 | Msa0565640 | 0.819272 | 1.267234e-52 | -8.615850e-47 |
Msa0325540 | Msa0604750 | 0.802218 | 6.226566e-49 | -8.615850e-47 |
Msa0325540 | Msa0614850 | 0.869149 | 3.844284e-66 | -8.615850e-47 |
Msa0325540 | Msa0655910 | 0.817350 | 3.450841e-52 | -8.615850e-47 |
Msa0325540 | Msa0701720 | 0.829156 | 6.027440e-55 | -8.615850e-47 |
Msa0325540 | Msa0703710 | 0.891538 | 3.626903e-74 | -8.615850e-47 |
Msa0325540 | Msa0703770 | 0.814949 | 1.186920e-51 | -8.615850e-47 |
Msa0325540 | Msa0746230 | 0.803530 | 3.336096e-49 | -8.615850e-47 |
Msa0325540 | Msa1040150 | 0.804168 | 2.459170e-49 | -8.615850e-47 |
Msa0325540 | Msa1078820 | 0.800010 | 1.761035e-48 | -8.615850e-47 |
Msa0325540 | Msa1123970 | 0.815321 | 9.816310e-52 | -8.615850e-47 |
Msa0325540 | Msa1144370 | 0.806761 | 7.032072e-50 | -8.615850e-47 |
Msa0325540 | Msa1169650 | 0.815981 | 6.996350e-52 | -8.615850e-47 |
Msa0325540 | Msa1187760 | 0.824054 | 9.937329e-54 | -8.615850e-47 |
Msa0325540 | Msa1356550 | 0.800935 | 1.141329e-48 | -8.615850e-47 |
Msa0325540 | Msa1433790 | 0.805644 | 1.208577e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325540 | MtrunA17_Chr8g0382131 | 95.660 | 1705 | 67 | 3 | 1 | 1702 | 1 | 1701 | 0.0 | 3320 |
Msa0325540 | MtrunA17_Chr3g0079151 | 74.091 | 1706 | 434 | 6 | 3 | 1702 | 5 | 1708 | 0.0 | 2581 |
Msa0325540 | MtrunA17_Chr8g0338441 | 74.122 | 1708 | 427 | 8 | 1 | 1701 | 1 | 1700 | 0.0 | 2567 |
Msa0325540 | MtrunA17_Chr8g0338311 | 71.846 | 1712 | 456 | 11 | 1 | 1701 | 4 | 1700 | 0.0 | 2468 |
Msa0325540 | MtrunA17_Chr8g0338331 | 69.063 | 1655 | 496 | 8 | 54 | 1703 | 13 | 1656 | 0.0 | 2303 |
Msa0325540 | MtrunA17_Chr2g0311121 | 90.426 | 940 | 83 | 2 | 766 | 1702 | 648 | 1583 | 0.0 | 1756 |
Msa0325540 | MtrunA17_Chr2g0311121 | 93.027 | 631 | 43 | 1 | 1 | 630 | 1 | 631 | 0.0 | 1202 |
Msa0325540 | MtrunA17_Chr6g0454611 | 65.419 | 775 | 211 | 8 | 330 | 1094 | 1 | 728 | 0.0 | 982 |
Msa0325540 | MtrunA17_Chr6g0454611 | 47.796 | 726 | 318 | 12 | 997 | 1701 | 395 | 1080 | 0.0 | 614 |
Msa0325540 | MtrunA17_Chr8g0338301 | 88.826 | 528 | 58 | 1 | 49 | 575 | 1 | 528 | 0.0 | 959 |
Msa0325540 | MtrunA17_Chr8g0338291 | 60.941 | 489 | 137 | 3 | 886 | 1339 | 71 | 540 | 0.0 | 599 |
Msa0325540 | MtrunA17_Chr8g0338291 | 47.602 | 563 | 226 | 11 | 699 | 1221 | 1 | 534 | 1.27e-146 | 462 |
Msa0325540 | MtrunA17_Chr8g0338281 | 75.676 | 222 | 50 | 2 | 1318 | 1539 | 9 | 226 | 3.77e-109 | 347 |
Msa0325540 | MtrunA17_Chr6g0454601 | 75.000 | 232 | 56 | 2 | 49 | 279 | 1 | 231 | 3.88e-104 | 332 |
Msa0325540 | MtrunA17_Chr8g0338271 | 83.212 | 137 | 22 | 1 | 1567 | 1702 | 1 | 137 | 8.46e-70 | 230 |
Msa0325540 | MtrunA17_Chr8g0378271 | 30.932 | 472 | 239 | 19 | 8 | 445 | 1144 | 1562 | 3.08e-43 | 174 |
Msa0325540 | MtrunA17_Chr8g0338341 | 72.222 | 54 | 14 | 1 | 1 | 53 | 4 | 57 | 2.25e-17 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325540 | AT3G48770.1 | 50.261 | 1723 | 810 | 23 | 3 | 1700 | 195 | 1895 | 0.0 | 1683 |
Msa0325540 | AT3G48770.2 | 50.261 | 1723 | 810 | 23 | 3 | 1700 | 195 | 1895 | 0.0 | 1683 |
Msa0325540 | AT3G28020.1 | 41.111 | 270 | 96 | 7 | 155 | 423 | 36 | 243 | 3.08e-50 | 179 |
Msa0325540 | AT4G13750.1 | 32.908 | 392 | 198 | 16 | 8 | 376 | 1162 | 1511 | 1.12e-36 | 153 |
Find 373 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACTGGTCTTCAAGATTTA+AGG | 0.093581 | 2_4:-33172032 | Msa0325540:CDS |
CGATTACATTGAATTCTTTC+TGG | 0.117748 | 2_4:+33169710 | None:intergenic |
ATCGGCGTGGTTGTTGATTT+TGG | 0.135945 | 2_4:-33170372 | Msa0325540:CDS |
CTTAAAATCACCCTCAAATT+TGG | 0.153756 | 2_4:-33170646 | Msa0325540:CDS |
TGGTTTCAAGAGTGTGTTTC+TGG | 0.176004 | 2_4:-33173232 | Msa0325540:CDS |
AGGAAAAGTTATAAAGTTAT+TGG | 0.191632 | 2_4:+33174729 | None:intergenic |
ATAAAGCTGCCAAGAAAATT+TGG | 0.198820 | 2_4:-33169464 | Msa0325540:CDS |
CTCAGTTCTGCCTTCCCTTC+TGG | 0.203073 | 2_4:-33168421 | Msa0325540:CDS |
TCCTTGCTTCCTGTTGTTAC+AGG | 0.212115 | 2_4:+33169129 | None:intergenic |
TGGCTTAAAGTTTCCGTTAA+TGG | 0.213641 | 2_4:-33171197 | Msa0325540:CDS |
CTCATTGATGAGAGCTTCTA+TGG | 0.223705 | 2_4:-33171089 | Msa0325540:CDS |
TATTTGTGCCCAAATGTTTC+AGG | 0.227165 | 2_4:+33169187 | None:intergenic |
GCCCATTTGCTCACATTTGC+AGG | 0.230967 | 2_4:+33171521 | None:intergenic |
GGCTTCTCCTCAACCCATTC+AGG | 0.234048 | 2_4:+33173120 | None:intergenic |
AAGTAAGCTTGATCAATAAA+AGG | 0.238617 | 2_4:+33170759 | None:intergenic |
TGTCATTTCTTTCATGTTGC+AGG | 0.239049 | 2_4:-33170275 | Msa0325540:CDS |
TGCTTGTTCTAGCCTGAAAA+TGG | 0.240607 | 2_4:-33168827 | Msa0325540:CDS |
AAGATCCTTGGTGTTGTTAC+TGG | 0.241657 | 2_4:-33170033 | Msa0325540:CDS |
CTTGAAAGCTGCTGTTTAAC+AGG | 0.244379 | 2_4:+33173006 | None:intergenic |
CCTGCGGCTCATCCAACTTC+TGG | 0.244674 | 2_4:+33168635 | None:intergenic |
GAAAGAGATTGTCCAGAAAT+TGG | 0.251652 | 2_4:-33169864 | Msa0325540:CDS |
ATGTGTTCCATCGGCCTTTA+TGG | 0.256561 | 2_4:-33172518 | Msa0325540:CDS |
TCTTATGCAGGCCAATTTAC+AGG | 0.257247 | 2_4:-33171425 | Msa0325540:CDS |
CTATGAAGCCTCTCCTGATT+TGG | 0.260100 | 2_4:+33172685 | None:intergenic |
GGTTGACCTTATCCGGCTTC+AGG | 0.268870 | 2_4:+33173028 | None:intergenic |
CCAGACGTGGGGCTGCATTT+TGG | 0.269695 | 2_4:-33170475 | Msa0325540:CDS |
TTAAGTGCTTGATAACAATT+TGG | 0.270152 | 2_4:+33170664 | None:intergenic |
CAATTCTCTTGGATAATAAA+TGG | 0.271572 | 2_4:-33172558 | Msa0325540:CDS |
GCAGGCCAATTTACAGGTTC+CGG | 0.271998 | 2_4:-33171419 | Msa0325540:CDS |
TTGATGATTATGTTGATCTT+TGG | 0.277427 | 2_4:-33169275 | Msa0325540:CDS |
GAAGGGAAATTAAGACATTT+AGG | 0.279343 | 2_4:+33169985 | None:intergenic |
CCATATAAAATGCATTGTTT+TGG | 0.288662 | 2_4:+33170156 | None:intergenic |
CTGCATAAGATGAGGAATTT+AGG | 0.289962 | 2_4:+33171438 | None:intergenic |
ATCTCTTCAACATGCTCTTT+TGG | 0.297767 | 2_4:+33174579 | None:intergenic |
ATGTGTCTTCAACCAATTTC+TGG | 0.298209 | 2_4:+33169852 | None:intergenic |
GCTCCTATTGCCTTTCTTTG+TGG | 0.300947 | 2_4:+33173526 | None:intergenic |
ATGCCACTCGTTGACAACTA+TGG | 0.304751 | 2_4:-33171578 | Msa0325540:CDS |
TTCTTCAGATGAAGGTTATC+AGG | 0.305500 | 2_4:+33169072 | None:intergenic |
GATGTTTATCCTGAAACATT+TGG | 0.311080 | 2_4:-33169196 | Msa0325540:CDS |
GCTTCCCGGAACCTGTAAAT+TGG | 0.312199 | 2_4:+33171414 | None:intergenic |
CTCAAATGGCGAACTTTCAA+TGG | 0.313505 | 2_4:+33172420 | None:intergenic |
TTCTTAATTCGCTCGCCATT+GGG | 0.317250 | 2_4:-33171152 | Msa0325540:CDS |
GTGATTGATCATAAATTCTA+TGG | 0.318339 | 2_4:-33170432 | Msa0325540:CDS |
AAGGCCATCAAATAAAATTA+AGG | 0.323716 | 2_4:+33168222 | None:intergenic |
GAAGACTTCTCCTGAGATAT+TGG | 0.326955 | 2_4:+33170913 | None:intergenic |
GTAGGCTGCTGTCTGAATTC+TGG | 0.327095 | 2_4:-33172288 | Msa0325540:CDS |
CAGAAAGAATTCAATGTAAT+CGG | 0.330687 | 2_4:-33169709 | Msa0325540:CDS |
ACACAGTGAAGACTCCTTCT+TGG | 0.331410 | 2_4:+33174687 | None:intergenic |
AACTGGTCTTCAAGATTTAA+GGG | 0.333106 | 2_4:-33172031 | Msa0325540:CDS |
ATTCCATCAAAGTCTGCTTC+TGG | 0.333193 | 2_4:+33171774 | None:intergenic |
TGAAGACACATGCTGGTTAT+AGG | 0.336295 | 2_4:-33169840 | Msa0325540:CDS |
CATGTGGAAGCAAAAGTTTC+CGG | 0.342746 | 2_4:-33172773 | Msa0325540:CDS |
TTACCTTTGCCATGGAAGTC+AGG | 0.345233 | 2_4:-33169311 | Msa0325540:CDS |
CAAATCAGGAGAGGCTTCAT+AGG | 0.348815 | 2_4:-33172684 | Msa0325540:CDS |
AATGCAATGCATCAAATTCT+TGG | 0.349981 | 2_4:-33170592 | Msa0325540:CDS |
TTAACAGGGTTGACCTTATC+CGG | 0.359006 | 2_4:+33173021 | None:intergenic |
AAAGGATGCTCCTTGCTTGC+AGG | 0.359775 | 2_4:-33169667 | Msa0325540:CDS |
GAGAAAATTAATAAGCTTCC+CGG | 0.361538 | 2_4:+33171400 | None:intergenic |
CTTGTTCATGGCTGATCAAT+TGG | 0.362922 | 2_4:-33171871 | Msa0325540:CDS |
GTAAGAAACAAAAGGACTTC+GGG | 0.368051 | 2_4:+33172976 | None:intergenic |
TATGAAGCCTCTCCTGATTT+GGG | 0.372971 | 2_4:+33172686 | None:intergenic |
ATGTTTATCCTGAAACATTT+GGG | 0.373249 | 2_4:-33169195 | Msa0325540:CDS |
CTTATATCTCCTCCAAATGC+TGG | 0.374935 | 2_4:-33171347 | Msa0325540:CDS |
GAAGAGGAGTTGAAAACAAT+TGG | 0.375017 | 2_4:-33171047 | Msa0325540:CDS |
TCAAGCTCCGGTATCAAGTT+TGG | 0.377622 | 2_4:-33172464 | Msa0325540:CDS |
TACAAAGAAAGATGACAAAA+TGG | 0.378234 | 2_4:-33168692 | Msa0325540:CDS |
AATCCAATCCAAAAGCAAAA+AGG | 0.378620 | 2_4:+33171286 | None:intergenic |
ACAACTTCATGCCTCTTGTC+TGG | 0.379351 | 2_4:+33168802 | None:intergenic |
CCTTGTCCACATTGCAGTCT+TGG | 0.379743 | 2_4:-33173153 | Msa0325540:CDS |
GGTATCCTCAGCAGGACTTT+GGG | 0.382002 | 2_4:-33169020 | Msa0325540:CDS |
CCACTTCTGATTATGTATAA+TGG | 0.385042 | 2_4:+33170209 | None:intergenic |
GCTGACATAAAGCAGATATA+TGG | 0.385390 | 2_4:-33173090 | Msa0325540:CDS |
ACTTGATTGTTTCTAATCCT+TGG | 0.387536 | 2_4:-33171496 | Msa0325540:CDS |
AGCAAAGAAAACACACTTTC+AGG | 0.390400 | 2_4:+33169943 | None:intergenic |
ATGACAAGTGCTGGAAATTC+TGG | 0.393370 | 2_4:-33169218 | Msa0325540:CDS |
TTTACATGCTTCCTCACAAC+TGG | 0.393777 | 2_4:+33171016 | None:intergenic |
ACAGCTGAAAACCCAGCATT+TGG | 0.395599 | 2_4:+33171335 | None:intergenic |
GAGGAAGCATGTAAATTCAT+TGG | 0.395863 | 2_4:-33171008 | Msa0325540:CDS |
GTTCTTAATTCGCTCGCCAT+TGG | 0.396110 | 2_4:-33171153 | Msa0325540:CDS |
CAGGCCAATTTACAGGTTCC+GGG | 0.401530 | 2_4:-33171418 | Msa0325540:CDS |
GTCAGTCTAATGCTTGTTCA+TGG | 0.403294 | 2_4:-33171883 | Msa0325540:CDS |
CTTGTCCACATTGCAGTCTT+GGG | 0.403552 | 2_4:-33173152 | Msa0325540:CDS |
GGATCTGTATTGAATGATTC+CGG | 0.406210 | 2_4:-33170813 | Msa0325540:CDS |
TATAGCCTATCACTGTCATC+AGG | 0.408350 | 2_4:-33168724 | Msa0325540:CDS |
TTCTTGGCAGCTTTATCCTC+AGG | 0.409894 | 2_4:+33169471 | None:intergenic |
AGATCCTCAGTCAAAGGATT+AGG | 0.411396 | 2_4:+33174525 | None:intergenic |
TTCATGTTGCAGGCTGCTGA+AGG | 0.412366 | 2_4:-33170265 | Msa0325540:CDS |
GGTTTGATTAAGCTGATTCT+CGG | 0.412424 | 2_4:-33168856 | Msa0325540:CDS |
ATGTTGATCTTTGGAATGAA+TGG | 0.413066 | 2_4:-33169266 | Msa0325540:CDS |
CTATCTGAATTGATCACGTT+GGG | 0.414492 | 2_4:-33168529 | Msa0325540:CDS |
ATAAGCCTGGTGACGTTAGT+AGG | 0.416281 | 2_4:-33172306 | Msa0325540:CDS |
TCTGCCTTCCCTTCTGGCTG+AGG | 0.417303 | 2_4:-33168415 | Msa0325540:exon |
GCATTCAAAACACTTGTTGT+AGG | 0.419093 | 2_4:-33172493 | Msa0325540:CDS |
TTTATTGATCAAGCTTACTT+TGG | 0.422780 | 2_4:-33170756 | Msa0325540:CDS |
GAATGAATGGGAGAGTTCAT+TGG | 0.422978 | 2_4:-33169253 | Msa0325540:CDS |
CCAACGTGATCAATTCAGAT+AGG | 0.423386 | 2_4:+33168530 | None:intergenic |
TGGTATCCTCAGCAGGACTT+TGG | 0.423557 | 2_4:-33169021 | Msa0325540:CDS |
TTCCATCAAAGTCTGCTTCT+GGG | 0.425936 | 2_4:+33171775 | None:intergenic |
GTTGACCTTATCCGGCTTCA+GGG | 0.430179 | 2_4:+33173029 | None:intergenic |
GACACTGGCCTTCCCAAATC+AGG | 0.433616 | 2_4:-33172698 | Msa0325540:CDS |
AAAAGATGTTCATTTCCTAA+TGG | 0.433660 | 2_4:-33174463 | Msa0325540:CDS |
GGATCTTCCAACACTGCATA+TGG | 0.433973 | 2_4:+33173547 | None:intergenic |
TGGGTATATAGTTCCTGAAT+GGG | 0.434524 | 2_4:-33173133 | Msa0325540:CDS |
GATGTCATATAACTTAGAAA+TGG | 0.434906 | 2_4:+33168990 | None:intergenic |
TGCTTTATGTCAGCAAGGGT+TGG | 0.437214 | 2_4:+33173099 | None:intergenic |
CTTAACCTATCTTCTCATGA+TGG | 0.437612 | 2_4:-33172226 | Msa0325540:CDS |
GGTACTTGTCTGAATACAAC+TGG | 0.439001 | 2_4:-33169497 | Msa0325540:CDS |
CGAATTAAGAACGACTTTGA+AGG | 0.439260 | 2_4:+33171164 | None:intergenic |
TTGGGTATATAGTTCCTGAA+TGG | 0.439800 | 2_4:-33173134 | Msa0325540:CDS |
CAATGAGGAGCTGAAGTTGT+TGG | 0.439958 | 2_4:-33170715 | Msa0325540:CDS |
GGCCCAGAAGCAGACTTTGA+TGG | 0.440259 | 2_4:-33171777 | Msa0325540:CDS |
TAAAATCTTAAATTCATTGA+AGG | 0.442200 | 2_4:-33170559 | Msa0325540:CDS |
CCTTTGCCTCAAGGAAGCTC+AGG | 0.442465 | 2_4:+33168764 | None:intergenic |
GCTTCACTCCCTCATTATAG+TGG | 0.448123 | 2_4:+33173678 | None:intergenic |
CTTTCTGAACTCATCATCAA+TGG | 0.449609 | 2_4:+33169882 | None:intergenic |
TCTTTCTTTAATCCAACTGA+TGG | 0.451371 | 2_4:-33169778 | Msa0325540:CDS |
AATGAGGAGCTGAAGTTGTT+GGG | 0.451772 | 2_4:-33170714 | Msa0325540:CDS |
TGCCTGCAAATGTGAGCAAA+TGG | 0.454255 | 2_4:-33171523 | Msa0325540:CDS |
CTGTCCACCTTCAGTGCCAT+TGG | 0.458222 | 2_4:+33169437 | None:intergenic |
CATAGGGGTAAAAGCTCACC+AGG | 0.459073 | 2_4:-33172667 | Msa0325540:CDS |
CGAAGGACAAAGTTCTCTAT+TGG | 0.460194 | 2_4:-33174555 | Msa0325540:CDS |
CTTGCCCCTGAAGCCGGATA+AGG | 0.460248 | 2_4:-33173034 | Msa0325540:CDS |
TCCTTTCTTTACCTTTGCCA+TGG | 0.464347 | 2_4:-33169319 | Msa0325540:CDS |
TAACCATTCTTCTTCACAGC+TGG | 0.465584 | 2_4:-33174637 | Msa0325540:five_prime_UTR |
GAGAACAGATGTTGAAGAAT+GGG | 0.466265 | 2_4:-33172725 | Msa0325540:CDS |
ATACTTGTATGAGCTCCATT+AGG | 0.468725 | 2_4:+33174448 | None:intergenic |
TTAAACTAGTGACCGTTGAT+TGG | 0.468862 | 2_4:-33172138 | Msa0325540:CDS |
TTAGCAATGGATATCAGATA+AGG | 0.469431 | 2_4:-33173188 | Msa0325540:CDS |
TTTCAGTTAGAGAAGATCAA+TGG | 0.471537 | 2_4:-33174607 | Msa0325540:exon |
CTTCCTTGAGGCAAAGGTCT+CGG | 0.472366 | 2_4:-33168758 | Msa0325540:CDS |
AAGTTGTTGGGAGTGGTAGT+TGG | 0.472898 | 2_4:-33170702 | Msa0325540:CDS |
GGAGAACAGATGTTGAAGAA+TGG | 0.473141 | 2_4:-33172726 | Msa0325540:CDS |
TTGCGATGCTACTTTCCATC+CGG | 0.473242 | 2_4:+33170794 | None:intergenic |
AGCAAACTACCTGTAACAAC+AGG | 0.473796 | 2_4:-33169138 | Msa0325540:CDS |
TGTTCACAAATTTGTCCAAT+GGG | 0.474943 | 2_4:+33170889 | None:intergenic |
CCAAAATGCAGCCCCACGTC+TGG | 0.476751 | 2_4:+33170475 | None:intergenic |
TCAAATGGCGAACTTTCAAT+GGG | 0.476870 | 2_4:+33172421 | None:intergenic |
AGTAAGCTTGATCAATAAAA+GGG | 0.477845 | 2_4:+33170760 | None:intergenic |
TGCTTCTCTCTTCAAACAGA+AGG | 0.478022 | 2_4:-33170331 | Msa0325540:CDS |
AAATACAGAGAAGAAACTTT+CGG | 0.478451 | 2_4:-33169169 | Msa0325540:CDS |
TGTCCCCTGATGACAGTGAT+AGG | 0.478490 | 2_4:+33168719 | None:intergenic |
TTAAACAGCAAACACATCTC+TGG | 0.478567 | 2_4:+33169814 | None:intergenic |
ATCTAGGGAGACAATTCTCT+TGG | 0.478692 | 2_4:-33172569 | Msa0325540:CDS |
TCATGTTGCAGGCTGCTGAA+GGG | 0.479495 | 2_4:-33170264 | Msa0325540:CDS |
TGCTCTGTGTATGTCTCTAT+CGG | 0.479706 | 2_4:+33172340 | None:intergenic |
CATGTTGCAGGCTGCTGAAG+GGG | 0.481462 | 2_4:-33170263 | Msa0325540:CDS |
AATTGTCGCATGACAAGTGC+TGG | 0.482123 | 2_4:-33169227 | Msa0325540:CDS |
ACATGATTAAACTTCTCAAA+TGG | 0.482821 | 2_4:+33172406 | None:intergenic |
TGTAAGAAACAAAAGGACTT+CGG | 0.482864 | 2_4:+33172975 | None:intergenic |
AGGAGGACTGTATCCATTAA+CGG | 0.483012 | 2_4:+33171184 | None:intergenic |
GATCCACAAAGAAAGGCAAT+AGG | 0.483396 | 2_4:-33173529 | Msa0325540:CDS |
CATTGTCTTGCCCCTGAAGC+CGG | 0.483637 | 2_4:-33173040 | Msa0325540:CDS |
GGATGAATTTAAGCATCAAA+AGG | 0.484194 | 2_4:+33170934 | None:intergenic |
CAAGTACACTTCTTCCTCTC+GGG | 0.484531 | 2_4:+33172249 | None:intergenic |
TCCTCCCATCATGAGAAGAT+AGG | 0.486346 | 2_4:+33172221 | None:intergenic |
ATAAAATATGTGGCTTCTGA+TGG | 0.487168 | 2_4:-33171983 | Msa0325540:CDS |
TTATATCTCCTCCAAATGCT+GGG | 0.488154 | 2_4:-33171346 | Msa0325540:CDS |
TATGCCAGAAAACACGCAAA+AGG | 0.489224 | 2_4:-33171813 | Msa0325540:CDS |
GGCAAGACAATGGTTGTAGT+TGG | 0.490621 | 2_4:+33173051 | None:intergenic |
GGAAGCAAAATATTGTTGAC+AGG | 0.490814 | 2_4:+33168243 | None:intergenic |
AAGATGACAAAATGGTTCGC+TGG | 0.490814 | 2_4:-33168684 | Msa0325540:CDS |
GTCAAAGAGGCCAAATTTGA+GGG | 0.493447 | 2_4:+33170636 | None:intergenic |
TGTTGATCTTTGGAATGAAT+GGG | 0.493934 | 2_4:-33169265 | Msa0325540:CDS |
CCAGAAGTTGGATGAGCCGC+AGG | 0.494550 | 2_4:-33168635 | Msa0325540:CDS |
TGTCAAAGAGGCCAAATTTG+AGG | 0.494664 | 2_4:+33170635 | None:intergenic |
TATTCCATTGATAAAATATG+TGG | 0.495033 | 2_4:-33171993 | Msa0325540:CDS |
TGATTGTTTCTAATCCTTGG+AGG | 0.495055 | 2_4:-33171493 | Msa0325540:CDS |
TGAAGATATTGAATTTCTGA+TGG | 0.495113 | 2_4:-33168485 | Msa0325540:CDS |
ACTTGATACCGGAGCTTGAT+CGG | 0.495364 | 2_4:+33172468 | None:intergenic |
GTAATGGTGGAGGGATCTGA+AGG | 0.495802 | 2_4:+33169967 | None:intergenic |
ATTAAGTTACTTCTCCAAGA+AGG | 0.495962 | 2_4:-33174701 | Msa0325540:five_prime_UTR |
CTGTTCACAAATTTGTCCAA+TGG | 0.496699 | 2_4:+33170888 | None:intergenic |
GCAAAAGGCTATCTTGAGAT+TGG | 0.497240 | 2_4:-33171798 | Msa0325540:CDS |
AATAGGAGCAGTGGTTACAT+AGG | 0.497331 | 2_4:-33173512 | Msa0325540:CDS |
TAAAGACATCTGAAGGTCTC+AGG | 0.499498 | 2_4:-33170845 | Msa0325540:CDS |
CCTGAGCTTCCTTGAGGCAA+AGG | 0.500624 | 2_4:-33168764 | Msa0325540:CDS |
AAAATCTTAAATTCATTGAA+GGG | 0.501087 | 2_4:-33170558 | Msa0325540:CDS |
TACCTTTGCCATGGAAGTCA+GGG | 0.501740 | 2_4:-33169310 | Msa0325540:CDS |
TTAAATTCATCCAATATCTC+AGG | 0.501765 | 2_4:-33170923 | Msa0325540:CDS |
TCAATAAAAGGCCCATCAGT+TGG | 0.504851 | 2_4:+33169766 | None:intergenic |
AGACTATTGTCAAAATATAC+AGG | 0.505568 | 2_4:-33169618 | Msa0325540:intron |
ACAAAATGGTTCGCTGGGAA+AGG | 0.506080 | 2_4:-33168678 | Msa0325540:CDS |
AGTGGTTACATAGGAGAGAA+AGG | 0.506839 | 2_4:-33173503 | Msa0325540:intron |
CAGGAGAAGTCTTCTCCCAT+TGG | 0.507963 | 2_4:-33170904 | Msa0325540:CDS |
TCTGATGACATTACTGCTAC+TGG | 0.509465 | 2_4:-33173632 | Msa0325540:CDS |
CGTGTCACAGAAACAAGAAA+AGG | 0.510501 | 2_4:-33171554 | Msa0325540:CDS |
TGTCCACCTTCAGTGCCATT+GGG | 0.510539 | 2_4:+33169438 | None:intergenic |
TCATTCAATACAGATCCAAC+AGG | 0.510860 | 2_4:+33170819 | None:intergenic |
AGAAGCAGACTTTGATGGAA+TGG | 0.511173 | 2_4:-33171772 | Msa0325540:CDS |
CTCAAGGTGACCTGCAAGCA+AGG | 0.511339 | 2_4:+33169657 | None:intergenic |
TTGTCACTGTCGTCAATGAA+AGG | 0.513515 | 2_4:+33170096 | None:intergenic |
AAGAGAACTGCATAGGACAT+TGG | 0.513715 | 2_4:+33171703 | None:intergenic |
GCAAGTACACTTCTTCCTCT+CGG | 0.516457 | 2_4:+33172248 | None:intergenic |
CTAAATTCCTCATCTTATGC+AGG | 0.516492 | 2_4:-33171437 | Msa0325540:CDS |
TGGATTCCCAATGGCACTGA+AGG | 0.517804 | 2_4:-33169444 | Msa0325540:CDS |
GAACAAAGGCCATGTTGTAA+AGG | 0.518437 | 2_4:+33168203 | None:intergenic |
GAATCCTCAGCCAGAAGGGA+AGG | 0.518984 | 2_4:+33168411 | None:intergenic |
AAGGAAGAACTGAAGATCCT+TGG | 0.519469 | 2_4:-33170045 | Msa0325540:CDS |
GGACAAAATCAAAGCAAAGT+TGG | 0.520170 | 2_4:-33172380 | Msa0325540:CDS |
CCTTCAGATGTCTTTAGCCA+AGG | 0.520212 | 2_4:+33170852 | None:intergenic |
AAATCAGGAGAGGCTTCATA+GGG | 0.521464 | 2_4:-33172683 | Msa0325540:CDS |
GCATTTGGAGGAGATATAAG+AGG | 0.522118 | 2_4:+33171350 | None:intergenic |
CAGAAGCACTTCTATAAGCC+TGG | 0.523495 | 2_4:-33172319 | Msa0325540:CDS |
TGCCACTCGTTGACAACTAT+GGG | 0.524270 | 2_4:-33171577 | Msa0325540:CDS |
GTGTCACAGAAACAAGAAAA+GGG | 0.524916 | 2_4:-33171553 | Msa0325540:CDS |
TTAACCTATCTTCTCATGAT+GGG | 0.525256 | 2_4:-33172225 | Msa0325540:CDS |
AGATGACAAAATGGTTCGCT+GGG | 0.525856 | 2_4:-33168683 | Msa0325540:CDS |
CATCCACAAGATTAGAACTC+TGG | 0.527727 | 2_4:+33172101 | None:intergenic |
CATCCAGAGTTCTAATCTTG+TGG | 0.527876 | 2_4:-33172104 | Msa0325540:CDS |
TTGAAAATAAGTAATGTGGC+TGG | 0.527999 | 2_4:+33173605 | None:intergenic |
TGAAGAATGGGTTGTGACAC+TGG | 0.528035 | 2_4:-33172713 | Msa0325540:CDS |
TATGCTCTTCATATAAACTT+CGG | 0.528299 | 2_4:+33169911 | None:intergenic |
TTCTTGAAGATATCTATGAT+AGG | 0.529049 | 2_4:-33169350 | Msa0325540:CDS |
GTACCAGCTGTGAAGAAGAA+TGG | 0.530285 | 2_4:+33174634 | None:intergenic |
ATTATTGAAAATAAGTAATG+TGG | 0.531522 | 2_4:+33173601 | None:intergenic |
TAGAATAAACAAGTATGAAG+AGG | 0.532384 | 2_4:-33171063 | Msa0325540:CDS |
AGGACAAAGTTCTCTATTGG+TGG | 0.533214 | 2_4:-33174552 | Msa0325540:CDS |
GAACACATTCAAGTATCCCT+TGG | 0.535610 | 2_4:+33172533 | None:intergenic |
TCAGAAGTGGCTGTATACTA+AGG | 0.535657 | 2_4:-33170196 | Msa0325540:CDS |
AATGTATAAAAGATGGCAGC+TGG | 0.535839 | 2_4:-33171217 | Msa0325540:CDS |
GGAAGCAAAAGTTTCCGGTC+AGG | 0.537304 | 2_4:-33172768 | Msa0325540:CDS |
TCCATGGCAAAGGTAAAGAA+AGG | 0.539229 | 2_4:+33169318 | None:intergenic |
TGCATTTCTTCCTACAGAGA+TGG | 0.539549 | 2_4:-33172638 | Msa0325540:CDS |
CTTTCTTTAATCCAACTGAT+GGG | 0.540609 | 2_4:-33169777 | Msa0325540:CDS |
ATTCCCAATGGCACTGAAGG+TGG | 0.541677 | 2_4:-33169441 | Msa0325540:CDS |
GAAGGTCTCAGGTCTCCTGT+TGG | 0.543070 | 2_4:-33170834 | Msa0325540:CDS |
GAATCTTCCTTGCTGAATGA+TGG | 0.544376 | 2_4:-33168919 | Msa0325540:CDS |
AAGCAAGGAGATATTTCTGC+TGG | 0.545651 | 2_4:-33169115 | Msa0325540:CDS |
AATGAAAATTATGTTGAGCT+CGG | 0.545690 | 2_4:-33171470 | Msa0325540:CDS |
ACCTGTAACAACAGGAAGCA+AGG | 0.547696 | 2_4:-33169130 | Msa0325540:CDS |
AATGAAGTATTTGTCAAAGC+GGG | 0.547848 | 2_4:-33171624 | Msa0325540:CDS |
TCATTGATGAGAGCTTCTAT+GGG | 0.548178 | 2_4:-33171088 | Msa0325540:CDS |
TTTGGCCTCTTTGACAGTTG+AGG | 0.548323 | 2_4:-33170628 | Msa0325540:CDS |
TATAACTTAGAAATGGAAGA+AGG | 0.549391 | 2_4:+33168997 | None:intergenic |
AAGAGGCATGAAGTTGTTCA+AGG | 0.549769 | 2_4:-33168796 | Msa0325540:CDS |
AGCCCTGACTTCCATGGCAA+AGG | 0.550141 | 2_4:+33169308 | None:intergenic |
ATGATTCTTACTTAAAGTGA+AGG | 0.551548 | 2_4:+33170959 | None:intergenic |
ATTTGATGGCCTTTACAACA+TGG | 0.552710 | 2_4:-33168212 | Msa0325540:three_prime_UTR |
AACAGCCTCAACTGTCAAAG+AGG | 0.553336 | 2_4:+33170623 | None:intergenic |
GAATGCACACAGCACTATGC+AGG | 0.553612 | 2_4:-33171935 | Msa0325540:CDS |
GTTGGAAGATCCACAAAGAA+AGG | 0.555314 | 2_4:-33173536 | Msa0325540:CDS |
TGTCACTGTCGTCAATGAAA+GGG | 0.556043 | 2_4:+33170097 | None:intergenic |
GGGTTTAGCCCTGACTTCCA+TGG | 0.556273 | 2_4:+33169302 | None:intergenic |
ATTGAGTCCATATGCAGTGT+TGG | 0.556571 | 2_4:-33173554 | Msa0325540:CDS |
CAGTAACTTCTCTAACCGAA+AGG | 0.556929 | 2_4:+33172941 | None:intergenic |
GGAGCTGAAGTTGTTGGGAG+TGG | 0.557326 | 2_4:-33170709 | Msa0325540:CDS |
TTGAGAAGTTTAATCATGTG+AGG | 0.557570 | 2_4:-33172402 | Msa0325540:CDS |
TGAAGATAACCACTATAATG+AGG | 0.558427 | 2_4:-33173687 | Msa0325540:CDS |
CCTATCTGAATTGATCACGT+TGG | 0.558706 | 2_4:-33168530 | Msa0325540:CDS |
TATAGTTCCTGAATGGGTTG+AGG | 0.559108 | 2_4:-33173127 | Msa0325540:CDS |
GCATTCATAAAGACTGAAAG+AGG | 0.559501 | 2_4:+33171952 | None:intergenic |
AAACACACTTTCAGGAGTAA+TGG | 0.560473 | 2_4:+33169951 | None:intergenic |
GCAAGGAGCATCCTTTCTCT+AGG | 0.560523 | 2_4:+33169674 | None:intergenic |
TGGATAATAAATGGAACCAA+GGG | 0.561153 | 2_4:-33172549 | Msa0325540:CDS |
GCTGAAAACCCAGCATTTGG+AGG | 0.561529 | 2_4:+33171338 | None:intergenic |
AATTGGTTGAAGACACATGC+TGG | 0.566666 | 2_4:-33169847 | Msa0325540:CDS |
GTTATGACAAACTCAAGTGC+TGG | 0.568814 | 2_4:+33173656 | None:intergenic |
TGTAGGATCCGATCAAGCTC+CGG | 0.569219 | 2_4:-33172476 | Msa0325540:CDS |
TCCGGTCAGGTCAGAAAATG+TGG | 0.569876 | 2_4:-33172755 | Msa0325540:CDS |
CCAAGACTGCAATGTGGACA+AGG | 0.569909 | 2_4:+33173153 | None:intergenic |
ATGCAGAATCCTCAGCCAGA+AGG | 0.571841 | 2_4:+33168406 | None:intergenic |
AAGTGGCTGTATACTAAGGT+TGG | 0.571857 | 2_4:-33170192 | Msa0325540:CDS |
TGAGAAGTTTAATCATGTGA+GGG | 0.572028 | 2_4:-33172401 | Msa0325540:CDS |
TGATCAAGCTTACTTTGGTG+AGG | 0.572342 | 2_4:-33170751 | Msa0325540:CDS |
TTGAAAGCTGCTGTTTAACA+GGG | 0.572367 | 2_4:+33173007 | None:intergenic |
GGTCAGAAAATGTGGTTGAA+AGG | 0.572463 | 2_4:-33172747 | Msa0325540:CDS |
AAATCTGCTTGAATAATGAA+AGG | 0.572563 | 2_4:+33172604 | None:intergenic |
CGGCTTCAGGGGCAAGACAA+TGG | 0.573496 | 2_4:+33173041 | None:intergenic |
TGCAGAATCCTCAGCCAGAA+GGG | 0.574519 | 2_4:+33168407 | None:intergenic |
CAACGTGATCAATTCAGATA+GGG | 0.575738 | 2_4:+33168531 | None:intergenic |
CAGAGTTCTAATCTTGTGGA+TGG | 0.575789 | 2_4:-33172100 | Msa0325540:CDS |
TTGGATAATAAATGGAACCA+AGG | 0.576105 | 2_4:-33172550 | Msa0325540:CDS |
AAGAAAATTTGGATTCCCAA+TGG | 0.577495 | 2_4:-33169453 | Msa0325540:CDS |
AAATTAGTGACCATCTCTGT+AGG | 0.582428 | 2_4:+33172628 | None:intergenic |
GCCTGCAAATGTGAGCAAAT+GGG | 0.582565 | 2_4:-33171522 | Msa0325540:CDS |
ATAGCCTATCACTGTCATCA+GGG | 0.583310 | 2_4:-33168723 | Msa0325540:CDS |
GGTTTGTGAGAACTATGTTA+AGG | 0.583360 | 2_4:-33168298 | Msa0325540:three_prime_UTR |
GCAGTTATAGTGTTCTGTGT+GGG | 0.585010 | 2_4:+33172913 | None:intergenic |
ATTAAAGAAAGAACTCCACT+TGG | 0.586157 | 2_4:+33169789 | None:intergenic |
CATAGAAGCTCTCATCAATG+AGG | 0.586536 | 2_4:+33171090 | None:intergenic |
TATTGTTTCAGAGAAATATG+TGG | 0.588582 | 2_4:+33168594 | None:intergenic |
AGACAATGGTTGTAGTTGGA+AGG | 0.589828 | 2_4:+33173055 | None:intergenic |
TTTATGATCAATCACAGGAA+GGG | 0.590635 | 2_4:+33170440 | None:intergenic |
ATAGAAGCTCTCATCAATGA+GGG | 0.591136 | 2_4:+33171091 | None:intergenic |
GAAGATAACCACTATAATGA+GGG | 0.592414 | 2_4:-33173686 | Msa0325540:CDS |
GTCACCACTGACCTAGAGAA+AGG | 0.592850 | 2_4:-33169685 | Msa0325540:CDS |
TGACCGAGACCTTTGCCTCA+AGG | 0.593741 | 2_4:+33168755 | None:intergenic |
TGAGGCAAAGGTCTCGGTCA+CGG | 0.594074 | 2_4:-33168752 | Msa0325540:CDS |
TAGAATTTATGATCAATCAC+AGG | 0.594080 | 2_4:+33170435 | None:intergenic |
TTCTCTGAAACAATATCAGA+AGG | 0.595476 | 2_4:-33168586 | Msa0325540:CDS |
CTGTATTGAATGATTCCGGA+TGG | 0.597662 | 2_4:-33170809 | Msa0325540:CDS |
CACACTTTCAGGAGTAATGG+TGG | 0.598081 | 2_4:+33169954 | None:intergenic |
ATACGAGCCAAACTTGATAC+CGG | 0.598781 | 2_4:+33172457 | None:intergenic |
AGCAGCCTACTAACGTCACC+AGG | 0.599932 | 2_4:+33172301 | None:intergenic |
GATACTTGAATGTGTTCCAT+CGG | 0.601004 | 2_4:-33172527 | Msa0325540:CDS |
CTGGATTGAAACATGGCGTG+AGG | 0.601071 | 2_4:-33170014 | Msa0325540:CDS |
GTGATCAATTCAGATAGGGC+AGG | 0.601107 | 2_4:+33168535 | None:intergenic |
GGAAGAAATGCATAGACCCC+TGG | 0.601342 | 2_4:+33172649 | None:intergenic |
GGACAAAGTTCTCTATTGGT+GGG | 0.601575 | 2_4:-33174551 | Msa0325540:CDS |
ATGGCGAACTTTCAATGGGA+AGG | 0.602741 | 2_4:+33172425 | None:intergenic |
CCATTATACATAATCAGAAG+TGG | 0.603923 | 2_4:-33170209 | Msa0325540:CDS |
ATATCTGCTTTATGTCAGCA+AGG | 0.604303 | 2_4:+33173094 | None:intergenic |
CCTTGGCTAAAGACATCTGA+AGG | 0.605729 | 2_4:-33170852 | Msa0325540:CDS |
TATCTGCTTTATGTCAGCAA+GGG | 0.605809 | 2_4:+33173095 | None:intergenic |
TACGGCAATACATGAATACA+AGG | 0.607899 | 2_4:-33170064 | Msa0325540:CDS |
ATTTATGATCAATCACAGGA+AGG | 0.608359 | 2_4:+33170439 | None:intergenic |
AGCTGCTTGAAGACAAACAT+GGG | 0.609366 | 2_4:-33170531 | Msa0325540:CDS |
GAAGATATAGATTTCCACTC+CGG | 0.610406 | 2_4:+33170132 | None:intergenic |
TGATGAAGATCCTCAGTCAA+AGG | 0.610610 | 2_4:+33174519 | None:intergenic |
AAGAGTGCAGCTACTACATG+TGG | 0.611117 | 2_4:-33172789 | Msa0325540:CDS |
CGCCCATAGTTGTCAACGAG+TGG | 0.614340 | 2_4:+33171575 | None:intergenic |
TAATGGTGGAGGGATCTGAA+GGG | 0.614670 | 2_4:+33169968 | None:intergenic |
GAAGTATTTGTCAAAGCGGG+AGG | 0.615263 | 2_4:-33171621 | Msa0325540:CDS |
TTGACCTTATCCGGCTTCAG+GGG | 0.615618 | 2_4:+33173030 | None:intergenic |
ACCTATCTTCTCATGATGGG+AGG | 0.616829 | 2_4:-33172222 | Msa0325540:CDS |
ATTAAGAACGACTTTGAAGG+AGG | 0.617792 | 2_4:+33171167 | None:intergenic |
ATCAACATAATCATCAAGTG+AGG | 0.619346 | 2_4:+33169281 | None:intergenic |
AAGAAAGGCAATAGGAGCAG+TGG | 0.621388 | 2_4:-33173521 | Msa0325540:CDS |
AAGCCTCTCCTGATTTGGGA+AGG | 0.622854 | 2_4:+33172690 | None:intergenic |
TTGTCTCCCTAGATGAGGCA+AGG | 0.624139 | 2_4:+33172578 | None:intergenic |
AATACTTCATTGATAAAGAG+TGG | 0.624505 | 2_4:+33171636 | None:intergenic |
TGGCACTGAAGGTGGACAGT+GGG | 0.628274 | 2_4:-33169433 | Msa0325540:CDS |
CGCTGTCAGAGAGAATCTCA+AGG | 0.628457 | 2_4:+33169641 | None:intergenic |
AATGCATCCATAAAGGCCGA+TGG | 0.628693 | 2_4:+33172511 | None:intergenic |
TCTCAACCTGAGCTTCCTTG+AGG | 0.629838 | 2_4:-33168770 | Msa0325540:CDS |
ACTTTCAGGAGTAATGGTGG+AGG | 0.632253 | 2_4:+33169957 | None:intergenic |
GTTTCTTGTATGACCAGACG+TGG | 0.632264 | 2_4:-33170488 | Msa0325540:CDS |
GAATCCTAATCCTTTGACTG+AGG | 0.633214 | 2_4:-33174529 | Msa0325540:CDS |
ACAGCATCAGAGATGAACCT+TGG | 0.639183 | 2_4:-33170869 | Msa0325540:CDS |
TCAACATAATCATCAAGTGA+GGG | 0.641694 | 2_4:+33169282 | None:intergenic |
TGAAAATGGAACCAGACAAG+AGG | 0.643004 | 2_4:-33168813 | Msa0325540:CDS |
GAAGGCCCAAAGTCCTGCTG+AGG | 0.645412 | 2_4:+33169015 | None:intergenic |
GCATCCTTTCTCTAGGTCAG+TGG | 0.646549 | 2_4:+33169681 | None:intergenic |
TTTCTTGTATGACCAGACGT+GGG | 0.646686 | 2_4:-33170487 | Msa0325540:CDS |
CTTTCAGGAGTAATGGTGGA+GGG | 0.646779 | 2_4:+33169958 | None:intergenic |
GAGAATTGTCTCCCTAGATG+AGG | 0.647287 | 2_4:+33172573 | None:intergenic |
AAATTATGTTGAGCTCGGAA+AGG | 0.647507 | 2_4:-33171465 | Msa0325540:CDS |
TGGCCTTCCCAAATCAGGAG+AGG | 0.648967 | 2_4:-33172693 | Msa0325540:CDS |
ATGGCACTGAAGGTGGACAG+TGG | 0.650381 | 2_4:-33169434 | Msa0325540:CDS |
AAGCTGCTTGAAGACAAACA+TGG | 0.651201 | 2_4:-33170532 | Msa0325540:CDS |
AGCATGTTGAAGAGATACGA+AGG | 0.651560 | 2_4:-33174572 | Msa0325540:CDS |
TCATACAAGAAACATTCACT+TGG | 0.652808 | 2_4:+33170498 | None:intergenic |
AGCAGTTATAGTGTTCTGTG+TGG | 0.655530 | 2_4:+33172912 | None:intergenic |
CAGAAGGGAAGGCAGAACTG+AGG | 0.658040 | 2_4:+33168422 | None:intergenic |
CAATGAAGTATTTGTCAAAG+CGG | 0.658221 | 2_4:-33171625 | Msa0325540:CDS |
ATGGCTGATCAATTGGAACA+AGG | 0.658523 | 2_4:-33171864 | Msa0325540:CDS |
CAGAGAAGAAACTTTCGGAG+AGG | 0.659611 | 2_4:-33169164 | Msa0325540:CDS |
CAGAAGTTGGATGAGCCGCA+GGG | 0.662110 | 2_4:-33168634 | Msa0325540:CDS |
GTTTGCTGTTTAATTCCAAG+TGG | 0.662733 | 2_4:-33169804 | Msa0325540:CDS |
TGTCACAGAAACAAGAAAAG+GGG | 0.667161 | 2_4:-33171552 | Msa0325540:CDS |
GCACTTTGCATACCAATCAA+CGG | 0.667243 | 2_4:+33172126 | None:intergenic |
AACAGCAAACACATCTCTGG+AGG | 0.669999 | 2_4:+33169817 | None:intergenic |
GTTGTTACTGGATTGAAACA+TGG | 0.671297 | 2_4:-33170021 | Msa0325540:CDS |
AAATTGGCCTGCATAAGATG+AGG | 0.673901 | 2_4:+33171430 | None:intergenic |
TTCTTGTATGACCAGACGTG+GGG | 0.677245 | 2_4:-33170486 | Msa0325540:CDS |
TAGCCTATCACTGTCATCAG+GGG | 0.682039 | 2_4:-33168722 | Msa0325540:CDS |
TGGAGTGATGTCCAGTTGTG+AGG | 0.682265 | 2_4:-33171027 | Msa0325540:CDS |
TTGAACACCATCATTCAGCA+AGG | 0.685355 | 2_4:+33168912 | None:intergenic |
CATAAAGTAAAAGAGAACAA+AGG | 0.685430 | 2_4:+33168189 | None:intergenic |
GGAAATATATAGCTACAATG+AGG | 0.687228 | 2_4:-33170730 | Msa0325540:CDS |
TGAATACAACTGGAAACCTG+AGG | 0.690265 | 2_4:-33169487 | Msa0325540:CDS |
GAGGAGTGCACCTACCAGAG+AGG | 0.691243 | 2_4:-33171247 | Msa0325540:CDS |
TAGGGGTAAAAGCTCACCAG+GGG | 0.694911 | 2_4:-33172665 | Msa0325540:CDS |
TAGAAGCTCTCATCAATGAG+GGG | 0.702345 | 2_4:+33171092 | None:intergenic |
CATTGATGAGAGCTTCTATG+GGG | 0.703531 | 2_4:-33171087 | Msa0325540:CDS |
TATTTCAGTGCATTTCCCTG+CGG | 0.710660 | 2_4:+33168619 | None:intergenic |
TCAATCCAGTAACAACACCA+AGG | 0.725170 | 2_4:+33170028 | None:intergenic |
ATAGGGGTAAAAGCTCACCA+GGG | 0.740878 | 2_4:-33172666 | Msa0325540:CDS |
AATCAGGAGAGGCTTCATAG+GGG | 0.751305 | 2_4:-33172682 | Msa0325540:CDS |
ATATACCCAAGACTGCAATG+TGG | 0.760728 | 2_4:+33173147 | None:intergenic |
CACACTACATCTCTCCACAG+AGG | 0.760834 | 2_4:-33172830 | Msa0325540:CDS |
GTACGATGCATTCTTCAGAG+AGG | 0.762566 | 2_4:+33169409 | None:intergenic |
ATTCGGAATCTGAAGCACAG+AGG | 0.767947 | 2_4:-33171266 | Msa0325540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTATTCTTTTTGAGT+AGG | - | chr2_4:33168576-33168595 | Msa0325540:CDS | 15.0% |
!! | TTTGTGTTAAAAATTACATT+TGG | - | chr2_4:33168923-33168942 | Msa0325540:CDS | 15.0% |
!!! | TTTTTCCATTAAAATTGATT+TGG | + | chr2_4:33168997-33169016 | None:intergenic | 15.0% |
!! | ATTATTGAAAATAAGTAATG+TGG | + | chr2_4:33169319-33169338 | None:intergenic | 15.0% |
!!! | ACTTATTTTCAATAATGAAA+AGG | - | chr2_4:33169323-33169342 | Msa0325540:CDS | 15.0% |
!!! | CTTATTTTCAATAATGAAAA+GGG | - | chr2_4:33169324-33169343 | Msa0325540:CDS | 15.0% |
!!! | TTTTTGAAATGTATAAAAGA+TGG | - | chr2_4:33171693-33171712 | Msa0325540:CDS | 15.0% |
!!! | ATGAATTTAAGATTTTACTA+GGG | + | chr2_4:33172355-33172374 | None:intergenic | 15.0% |
!!! | AATGAATTTAAGATTTTACT+AGG | + | chr2_4:33172356-33172375 | None:intergenic | 15.0% |
!! | TAAAATCTTAAATTCATTGA+AGG | - | chr2_4:33172358-33172377 | Msa0325540:CDS | 15.0% |
!! | AAAATCTTAAATTCATTGAA+GGG | - | chr2_4:33172359-33172378 | Msa0325540:CDS | 15.0% |
!! | AAAAATGAACTGAAAAAAAT+CGG | - | chr2_4:33172527-33172546 | Msa0325540:CDS | 15.0% |
!! | TAAAAATTTGCATCAATAAA+AGG | + | chr2_4:33173166-33173185 | None:intergenic | 15.0% |
!!! | TTTATTGATGCAAATTTTTA+TGG | - | chr2_4:33173166-33173185 | Msa0325540:CDS | 15.0% |
!! | ATAATATTGTGAATATACAT+AGG | - | chr2_4:33173399-33173418 | Msa0325540:intron | 15.0% |
!! | GAGAAGTAACTTAATAAAAA+AGG | + | chr2_4:33168211-33168230 | None:intergenic | 20.0% |
!! | ATTATACTAAGAAAGAAAAG+AGG | + | chr2_4:33168511-33168530 | None:intergenic | 20.0% |
!! | TATACTATTTAGTGTTTGTT+TGG | - | chr2_4:33168812-33168831 | Msa0325540:CDS | 20.0% |
!!! | AGTTGAATGTTTTACTTATT+TGG | - | chr2_4:33169532-33169551 | Msa0325540:intron | 20.0% |
!! | TTTATATCACTTGATTAACA+AGG | + | chr2_4:33169562-33169581 | None:intergenic | 20.0% |
!! | TATCCATTGCTAAAAATATA+CGG | + | chr2_4:33169722-33169741 | None:intergenic | 20.0% |
!!! | TGATTTTTGTAAGAAACAAA+AGG | + | chr2_4:33169952-33169971 | None:intergenic | 20.0% |
!!! | ATAATGTACTCAACTTTTTA+GGG | - | chr2_4:33170755-33170774 | Msa0325540:CDS | 20.0% |
!! | TATTCCATTGATAAAATATG+TGG | - | chr2_4:33170924-33170943 | Msa0325540:CDS | 20.0% |
!!! | CATATAAAATGCATTGTTTT+GGG | + | chr2_4:33172763-33172782 | None:intergenic | 20.0% |
!!! | GATATTCTTTTCAACTTAAA+AGG | - | chr2_4:33174040-33174059 | Msa0325540:intron | 20.0% |
!! | AACATCTTTTGCATAAAGTT+CGG | + | chr2_4:33168444-33168463 | None:intergenic | 25.0% |
! | AAAAGATGTTCATTTCCTAA+TGG | - | chr2_4:33168454-33168473 | Msa0325540:CDS | 25.0% |
!! | AGAGTCCAAATCAATTTTAA+TGG | - | chr2_4:33168989-33169008 | Msa0325540:CDS | 25.0% |
!! | AAAGACATTAGCAATTTTAG+AGG | + | chr2_4:33169049-33169068 | None:intergenic | 25.0% |
! | GAGAACTAATATAAAAGTCA+CGG | - | chr2_4:33169075-33169094 | Msa0325540:CDS | 25.0% |
! | ATTGAGTTTGAGAACAAAAT+TGG | + | chr2_4:33169136-33169155 | None:intergenic | 25.0% |
! | TCTTAAAATGTTGTGTACTT+TGG | - | chr2_4:33169464-33169483 | Msa0325540:CDS | 25.0% |
! | CATTGACAAAATCTCTTTAA+TGG | - | chr2_4:33169647-33169666 | Msa0325540:CDS | 25.0% |
! | AAATCTGCTTGAATAATGAA+AGG | + | chr2_4:33170316-33170335 | None:intergenic | 25.0% |
! | CAATTCTCTTGGATAATAAA+TGG | - | chr2_4:33170359-33170378 | Msa0325540:CDS | 25.0% |
! | ACATGATTAAACTTCTCAAA+TGG | + | chr2_4:33170514-33170533 | None:intergenic | 25.0% |
!! | GATAATGTACTCAACTTTTT+AGG | - | chr2_4:33170754-33170773 | Msa0325540:CDS | 25.0% |
!! | TAATGTACTCAACTTTTTAG+GGG | - | chr2_4:33170756-33170775 | Msa0325540:CDS | 25.0% |
!! | TATTGTTTGTTGCTAAAAAC+TGG | - | chr2_4:33170869-33170888 | Msa0325540:CDS | 25.0% |
!!! | TATTTTTAAGAGAACTGCAT+AGG | + | chr2_4:33171224-33171243 | None:intergenic | 25.0% |
! | AATACTTCATTGATAAAGAG+TGG | + | chr2_4:33171284-33171303 | None:intergenic | 25.0% |
! | AATGAAAATTATGTTGAGCT+CGG | - | chr2_4:33171447-33171466 | Msa0325540:CDS | 25.0% |
! | TAGAATAAACAAGTATGAAG+AGG | - | chr2_4:33171854-33171873 | Msa0325540:CDS | 25.0% |
! | ATGATTCTTACTTAAAGTGA+AGG | + | chr2_4:33171961-33171980 | None:intergenic | 25.0% |
! | TTAAATTCATCCAATATCTC+AGG | - | chr2_4:33171994-33172013 | Msa0325540:CDS | 25.0% |
! | AGTAAGCTTGATCAATAAAA+GGG | + | chr2_4:33172160-33172179 | None:intergenic | 25.0% |
! | AAGTAAGCTTGATCAATAAA+AGG | + | chr2_4:33172161-33172180 | None:intergenic | 25.0% |
! | TTTATTGATCAAGCTTACTT+TGG | - | chr2_4:33172161-33172180 | Msa0325540:CDS | 25.0% |
!! | TTAAGTGCTTGATAACAATT+TGG | + | chr2_4:33172256-33172275 | None:intergenic | 25.0% |
! | TAGAATTTATGATCAATCAC+AGG | + | chr2_4:33172485-33172504 | None:intergenic | 25.0% |
! | GTGATTGATCATAAATTCTA+TGG | - | chr2_4:33172485-33172504 | Msa0325540:CDS | 25.0% |
! | ATAATGGTAGAAAAATCAGA+AGG | + | chr2_4:33172695-33172714 | None:intergenic | 25.0% |
!! | CCATATAAAATGCATTGTTT+TGG | + | chr2_4:33172764-33172783 | None:intergenic | 25.0% |
!! | CCAAAACAATGCATTTTATA+TGG | - | chr2_4:33172761-33172780 | Msa0325540:CDS | 25.0% |
! | TATGCTCTTCATATAAACTT+CGG | + | chr2_4:33173009-33173028 | None:intergenic | 25.0% |
! | CAGAAAGAATTCAATGTAAT+CGG | - | chr2_4:33173208-33173227 | Msa0325540:CDS | 25.0% |
! | AGACTATTGTCAAAATATAC+AGG | - | chr2_4:33173299-33173318 | Msa0325540:intron | 25.0% |
! | TTAAACCAAAAAGCTTATCA+GGG | + | chr2_4:33173538-33173557 | None:intergenic | 25.0% |
! | TTTAAACCAAAAAGCTTATC+AGG | + | chr2_4:33173539-33173558 | None:intergenic | 25.0% |
! | TTCTTGAAGATATCTATGAT+AGG | - | chr2_4:33173567-33173586 | Msa0325540:CDS | 25.0% |
!! | TTGATGATTATGTTGATCTT+TGG | - | chr2_4:33173642-33173661 | Msa0325540:CDS | 25.0% |
! | ATGTTTATCCTGAAACATTT+GGG | - | chr2_4:33173722-33173741 | Msa0325540:intron | 25.0% |
! | AAATACAGAGAAGAAACTTT+CGG | - | chr2_4:33173748-33173767 | Msa0325540:intron | 25.0% |
! | TATAACTTAGAAATGGAAGA+AGG | + | chr2_4:33173923-33173942 | None:intergenic | 25.0% |
! | GATGTCATATAACTTAGAAA+TGG | + | chr2_4:33173930-33173949 | None:intergenic | 25.0% |
! | TATGACATCTACAGAAAAAT+TGG | - | chr2_4:33173941-33173960 | Msa0325540:intron | 25.0% |
! | TACAAAGAAAGATGACAAAA+TGG | - | chr2_4:33174225-33174244 | Msa0325540:intron | 25.0% |
! | TATTGTTTCAGAGAAATATG+TGG | + | chr2_4:33174326-33174345 | None:intergenic | 25.0% |
! | TGAAGATATTGAATTTCTGA+TGG | - | chr2_4:33174432-33174451 | Msa0325540:intron | 25.0% |
!!! | TTTCTTTGTTCTCTTTTTTG+TGG | - | chr2_4:33174598-33174617 | Msa0325540:exon | 25.0% |
!!! | GCTTCCTTAATTTTATTTGA+TGG | - | chr2_4:33174691-33174710 | Msa0325540:five_prime_UTR | 25.0% |
! | AAGGCCATCAAATAAAATTA+AGG | + | chr2_4:33174698-33174717 | None:intergenic | 25.0% |
ATTAAGTTACTTCTCCAAGA+AGG | - | chr2_4:33168216-33168235 | Msa0325540:three_prime_UTR | 30.0% | |
TTTCAGTTAGAGAAGATCAA+TGG | - | chr2_4:33168310-33168329 | Msa0325540:three_prime_UTR | 30.0% | |
TGAAGATAACCACTATAATG+AGG | - | chr2_4:33169230-33169249 | Msa0325540:CDS | 30.0% | |
GAAGATAACCACTATAATGA+GGG | - | chr2_4:33169231-33169250 | Msa0325540:CDS | 30.0% | |
TTGAAAATAAGTAATGTGGC+TGG | + | chr2_4:33169315-33169334 | None:intergenic | 30.0% | |
!!! | CATATGGACTCAATGTTTTT+TGG | + | chr2_4:33169357-33169376 | None:intergenic | 30.0% |
! | CTTCAATTTGGCTACTTTAA+TGG | + | chr2_4:33169613-33169632 | None:intergenic | 30.0% |
TTGCACAATCATCTTCAATT+TGG | + | chr2_4:33169625-33169644 | None:intergenic | 30.0% | |
CTCTTTAATGGTTGAATTTC+AGG | - | chr2_4:33169659-33169678 | Msa0325540:CDS | 30.0% | |
AATGGTTGAATTTCAGGAAT+TGG | - | chr2_4:33169665-33169684 | Msa0325540:CDS | 30.0% | |
TTAGCAATGGATATCAGATA+AGG | - | chr2_4:33169729-33169748 | Msa0325540:CDS | 30.0% | |
TGTAAGAAACAAAAGGACTT+CGG | + | chr2_4:33169945-33169964 | None:intergenic | 30.0% | |
TACAAAAATCAGACACCTTT+CGG | - | chr2_4:33169961-33169980 | Msa0325540:CDS | 30.0% | |
TTGGATAATAAATGGAACCA+AGG | - | chr2_4:33170367-33170386 | Msa0325540:CDS | 30.0% | |
TGGATAATAAATGGAACCAA+GGG | - | chr2_4:33170368-33170387 | Msa0325540:CDS | 30.0% | |
!! | TGTTTTGAATGCATCCATAA+AGG | + | chr2_4:33170416-33170435 | None:intergenic | 30.0% |
TTGAGAAGTTTAATCATGTG+AGG | - | chr2_4:33170515-33170534 | Msa0325540:CDS | 30.0% | |
TGAGAAGTTTAATCATGTGA+GGG | - | chr2_4:33170516-33170535 | Msa0325540:CDS | 30.0% | |
TTAACCTATCTTCTCATGAT+GGG | - | chr2_4:33170692-33170711 | Msa0325540:CDS | 30.0% | |
!! | AAACTGGTCTTCAAGATTTA+AGG | - | chr2_4:33170885-33170904 | Msa0325540:CDS | 30.0% |
!! | AACTGGTCTTCAAGATTTAA+GGG | - | chr2_4:33170886-33170905 | Msa0325540:CDS | 30.0% |
! | GAAGCCACATATTTTATCAA+TGG | + | chr2_4:33170931-33170950 | None:intergenic | 30.0% |
ATAAAATATGTGGCTTCTGA+TGG | - | chr2_4:33170934-33170953 | Msa0325540:CDS | 30.0% | |
!! | TGTTTTCTGGCATAAAAAAC+CGG | + | chr2_4:33171098-33171117 | None:intergenic | 30.0% |
CAAAAAATGAGCATATGCAA+TGG | + | chr2_4:33171259-33171278 | None:intergenic | 30.0% | |
! | CAATGAAGTATTTGTCAAAG+CGG | - | chr2_4:33171292-33171311 | Msa0325540:CDS | 30.0% |
! | AATGAAGTATTTGTCAAAGC+GGG | - | chr2_4:33171293-33171312 | Msa0325540:CDS | 30.0% |
!! | ACTTGATTGTTTCTAATCCT+TGG | - | chr2_4:33171421-33171440 | Msa0325540:CDS | 30.0% |
! | ACATAATTTTCATTCCTCCA+AGG | + | chr2_4:33171441-33171460 | None:intergenic | 30.0% |
GAGAAAATTAATAAGCTTCC+CGG | + | chr2_4:33171520-33171539 | None:intergenic | 30.0% | |
! | AATTTTCTCACAACTCATGT+TGG | - | chr2_4:33171531-33171550 | Msa0325540:CDS | 30.0% |
!!! | AAGCAAAAAGGCATTGTTTT+TGG | + | chr2_4:33171622-33171641 | None:intergenic | 30.0% |
! | AAACAATGCCTTTTTGCTTT+TGG | - | chr2_4:33171623-33171642 | Msa0325540:CDS | 30.0% |
AATCCAATCCAAAAGCAAAA+AGG | + | chr2_4:33171634-33171653 | None:intergenic | 30.0% | |
!! | TTTTGCTTTTGGATTGGATT+CGG | - | chr2_4:33171634-33171653 | Msa0325540:CDS | 30.0% |
ATACATTTCAAAAACCTCTC+TGG | + | chr2_4:33171687-33171706 | None:intergenic | 30.0% | |
AAAAATCTTGCAAAGTGGTT+CGG | - | chr2_4:33171788-33171807 | Msa0325540:CDS | 30.0% | |
GGATGAATTTAAGCATCAAA+AGG | + | chr2_4:33171986-33172005 | None:intergenic | 30.0% | |
TGTTCACAAATTTGTCCAAT+GGG | + | chr2_4:33172031-33172050 | None:intergenic | 30.0% | |
CTTAAAATCACCCTCAAATT+TGG | - | chr2_4:33172271-33172290 | Msa0325540:CDS | 30.0% | |
AATGCAATGCATCAAATTCT+TGG | - | chr2_4:33172325-33172344 | Msa0325540:CDS | 30.0% | |
TCATACAAGAAACATTCACT+TGG | + | chr2_4:33172422-33172441 | None:intergenic | 30.0% | |
TTTATGATCAATCACAGGAA+GGG | + | chr2_4:33172480-33172499 | None:intergenic | 30.0% | |
ATTTATGATCAATCACAGGA+AGG | + | chr2_4:33172481-33172500 | None:intergenic | 30.0% | |
CCACTTCTGATTATGTATAA+TGG | + | chr2_4:33172711-33172730 | None:intergenic | 30.0% | |
CCATTATACATAATCAGAAG+TGG | - | chr2_4:33172708-33172727 | Msa0325540:CDS | 30.0% | |
! | ACAATGCATTTTATATGGTC+CGG | - | chr2_4:33172766-33172785 | Msa0325540:CDS | 30.0% |
! | CAGTGACAAATTTTATGGTA+CGG | - | chr2_4:33172835-33172854 | Msa0325540:CDS | 30.0% |
GAAGGGAAATTAAGACATTT+AGG | + | chr2_4:33172935-33172954 | None:intergenic | 30.0% | |
ATTAAAGAAAGAACTCCACT+TGG | + | chr2_4:33173131-33173150 | None:intergenic | 30.0% | |
TCTTTCTTTAATCCAACTGA+TGG | - | chr2_4:33173139-33173158 | Msa0325540:CDS | 30.0% | |
CTTTCTTTAATCCAACTGAT+GGG | - | chr2_4:33173140-33173159 | Msa0325540:CDS | 30.0% | |
CGATTACATTGAATTCTTTC+TGG | + | chr2_4:33173210-33173229 | None:intergenic | 30.0% | |
ATCAAAGTCAAAGAGAGTTA+AGG | + | chr2_4:33173381-33173400 | None:intergenic | 30.0% | |
ATAAAGCTGCCAAGAAAATT+TGG | - | chr2_4:33173453-33173472 | Msa0325540:intron | 30.0% | |
! | ATTGGGAATCCAAATTTTCT+TGG | + | chr2_4:33173465-33173484 | None:intergenic | 30.0% |
AAGAAAATTTGGATTCCCAA+TGG | - | chr2_4:33173464-33173483 | Msa0325540:intron | 30.0% | |
TCAACATAATCATCAAGTGA+GGG | + | chr2_4:33173638-33173657 | None:intergenic | 30.0% | |
ATCAACATAATCATCAAGTG+AGG | + | chr2_4:33173639-33173658 | None:intergenic | 30.0% | |
!! | ATGTTGATCTTTGGAATGAA+TGG | - | chr2_4:33173651-33173670 | Msa0325540:CDS | 30.0% |
!! | TGTTGATCTTTGGAATGAAT+GGG | - | chr2_4:33173652-33173671 | Msa0325540:CDS | 30.0% |
GATGTTTATCCTGAAACATT+TGG | - | chr2_4:33173721-33173740 | Msa0325540:intron | 30.0% | |
!! | TTCTCTGAAACAATATCAGA+AGG | - | chr2_4:33174331-33174350 | Msa0325540:intron | 30.0% |
! | ACAGAAAATCTGCATGTTTT+TGG | + | chr2_4:33174461-33174480 | None:intergenic | 30.0% |
! | ATCTCTTCAACATGCTCTTT+TGG | + | chr2_4:33168341-33168360 | None:intergenic | 35.0% |
ATACTTGTATGAGCTCCATT+AGG | + | chr2_4:33168472-33168491 | None:intergenic | 35.0% | |
ATGTAAAAGAAGAACGAGCA+TGG | + | chr2_4:33168622-33168641 | None:intergenic | 35.0% | |
!! | ATGCGATCGTGTTTTTATGA+GGG | - | chr2_4:33168738-33168757 | Msa0325540:CDS | 35.0% |
! | AAGATGGACTTGTGCTAATA+TGG | - | chr2_4:33169491-33169510 | Msa0325540:CDS | 35.0% |
!!! | CAGCCGTATATTTTTAGCAA+TGG | - | chr2_4:33169716-33169735 | Msa0325540:CDS | 35.0% |
TTGGGTATATAGTTCCTGAA+TGG | - | chr2_4:33169783-33169802 | Msa0325540:CDS | 35.0% | |
TGGGTATATAGTTCCTGAAT+GGG | - | chr2_4:33169784-33169803 | Msa0325540:CDS | 35.0% | |
TATCTGCTTTATGTCAGCAA+GGG | + | chr2_4:33169825-33169844 | None:intergenic | 35.0% | |
ATATCTGCTTTATGTCAGCA+AGG | + | chr2_4:33169826-33169845 | None:intergenic | 35.0% | |
GCTGACATAAAGCAGATATA+TGG | - | chr2_4:33169827-33169846 | Msa0325540:CDS | 35.0% | |
! | TTGAAAGCTGCTGTTTAACA+GGG | + | chr2_4:33169913-33169932 | None:intergenic | 35.0% |
GTAAGAAACAAAAGGACTTC+GGG | + | chr2_4:33169944-33169963 | None:intergenic | 35.0% | |
! | AGCATTACTATTTTCCTCTG+TGG | + | chr2_4:33170104-33170123 | None:intergenic | 35.0% |
GAGAACAGATGTTGAAGAAT+GGG | - | chr2_4:33170192-33170211 | Msa0325540:CDS | 35.0% | |
AAATTAGTGACCATCTCTGT+AGG | + | chr2_4:33170292-33170311 | None:intergenic | 35.0% | |
GATACTTGAATGTGTTCCAT+CGG | - | chr2_4:33170390-33170409 | Msa0325540:CDS | 35.0% | |
!! | GCATTCAAAACACTTGTTGT+AGG | - | chr2_4:33170424-33170443 | Msa0325540:CDS | 35.0% |
TCAAATGGCGAACTTTCAAT+GGG | + | chr2_4:33170499-33170518 | None:intergenic | 35.0% | |
GGACAAAATCAAAGCAAAGT+TGG | - | chr2_4:33170537-33170556 | Msa0325540:CDS | 35.0% | |
CTTAACCTATCTTCTCATGA+TGG | - | chr2_4:33170691-33170710 | Msa0325540:CDS | 35.0% | |
TTAAACTAGTGACCGTTGAT+TGG | - | chr2_4:33170779-33170798 | Msa0325540:CDS | 35.0% | |
GCATTCATAAAGACTGAAAG+AGG | + | chr2_4:33170968-33170987 | None:intergenic | 35.0% | |
! | AACAAGGAATTTTCATGTGC+AGG | - | chr2_4:33171069-33171088 | Msa0325540:CDS | 35.0% |
! | AATTTTCATGTGCAGGAAAC+CGG | - | chr2_4:33171076-33171095 | Msa0325540:CDS | 35.0% |
GTGTCACAGAAACAAGAAAA+GGG | - | chr2_4:33171364-33171383 | Msa0325540:CDS | 35.0% | |
TGTCACAGAAACAAGAAAAG+GGG | - | chr2_4:33171365-33171384 | Msa0325540:CDS | 35.0% | |
!! | TGATTGTTTCTAATCCTTGG+AGG | - | chr2_4:33171424-33171443 | Msa0325540:CDS | 35.0% |
AAATTATGTTGAGCTCGGAA+AGG | - | chr2_4:33171452-33171471 | Msa0325540:CDS | 35.0% | |
CTGCATAAGATGAGGAATTT+AGG | + | chr2_4:33171482-33171501 | None:intergenic | 35.0% | |
CTAAATTCCTCATCTTATGC+AGG | - | chr2_4:33171480-33171499 | Msa0325540:CDS | 35.0% | |
TTATATCTCCTCCAAATGCT+GGG | - | chr2_4:33171571-33171590 | Msa0325540:CDS | 35.0% | |
!!! | AAGGCATTGTTTTTGGTAAG+TGG | + | chr2_4:33171615-33171634 | None:intergenic | 35.0% |
!! | ATGCCTTTTTGCTTTTGGAT+TGG | - | chr2_4:33171628-33171647 | Msa0325540:CDS | 35.0% |
ATTTCAAAAACCTCTCTGGT+AGG | + | chr2_4:33171683-33171702 | None:intergenic | 35.0% | |
AATGTATAAAAGATGGCAGC+TGG | - | chr2_4:33171700-33171719 | Msa0325540:CDS | 35.0% | |
TGGCTTAAAGTTTCCGTTAA+TGG | - | chr2_4:33171720-33171739 | Msa0325540:CDS | 35.0% | |
! | ATTAAGAACGACTTTGAAGG+AGG | + | chr2_4:33171753-33171772 | None:intergenic | 35.0% |
CGAATTAAGAACGACTTTGA+AGG | + | chr2_4:33171756-33171775 | None:intergenic | 35.0% | |
! | CTTTGCAAGATTTTTCCCAA+TGG | + | chr2_4:33171783-33171802 | None:intergenic | 35.0% |
TTGGGAAAAATCTTGCAAAG+TGG | - | chr2_4:33171783-33171802 | Msa0325540:CDS | 35.0% | |
ATAGAAGCTCTCATCAATGA+GGG | + | chr2_4:33171829-33171848 | None:intergenic | 35.0% | |
TCATTGATGAGAGCTTCTAT+GGG | - | chr2_4:33171829-33171848 | Msa0325540:CDS | 35.0% | |
GAAGAGGAGTTGAAAACAAT+TGG | - | chr2_4:33171870-33171889 | Msa0325540:CDS | 35.0% | |
! | GAGGAAGCATGTAAATTCAT+TGG | - | chr2_4:33171909-33171928 | Msa0325540:CDS | 35.0% |
CTGTTCACAAATTTGTCCAA+TGG | + | chr2_4:33172032-33172051 | None:intergenic | 35.0% | |
TCATTCAATACAGATCCAAC+AGG | + | chr2_4:33172101-33172120 | None:intergenic | 35.0% | |
GGATCTGTATTGAATGATTC+CGG | - | chr2_4:33172104-33172123 | Msa0325540:CDS | 35.0% | |
! | TGTCATTTCTTTCATGTTGC+AGG | - | chr2_4:33172642-33172661 | Msa0325540:CDS | 35.0% |
GAAGATATAGATTTCCACTC+CGG | + | chr2_4:33172788-33172807 | None:intergenic | 35.0% | |
! | GACGACAGTGACAAATTTTA+TGG | - | chr2_4:33172830-33172849 | Msa0325540:CDS | 35.0% |
TACGGCAATACATGAATACA+AGG | - | chr2_4:33172853-33172872 | Msa0325540:CDS | 35.0% | |
GTTGTTACTGGATTGAAACA+TGG | - | chr2_4:33172896-33172915 | Msa0325540:CDS | 35.0% | |
AAACACACTTTCAGGAGTAA+TGG | + | chr2_4:33172969-33172988 | None:intergenic | 35.0% | |
AGCAAAGAAAACACACTTTC+AGG | + | chr2_4:33172977-33172996 | None:intergenic | 35.0% | |
!! | TGAAAGTGTGTTTTCTTTGC+TGG | - | chr2_4:33172976-33172995 | Msa0325540:CDS | 35.0% |
CTTTCTGAACTCATCATCAA+TGG | + | chr2_4:33173038-33173057 | None:intergenic | 35.0% | |
GAAAGAGATTGTCCAGAAAT+TGG | - | chr2_4:33173053-33173072 | Msa0325540:CDS | 35.0% | |
ATGTGTCTTCAACCAATTTC+TGG | + | chr2_4:33173068-33173087 | None:intergenic | 35.0% | |
TTAAACAGCAAACACATCTC+TGG | + | chr2_4:33173106-33173125 | None:intergenic | 35.0% | |
!! | GTTTGCTGTTTAATTCCAAG+TGG | - | chr2_4:33173113-33173132 | Msa0325540:CDS | 35.0% |
TATTTGTGCCCAAATGTTTC+AGG | + | chr2_4:33173733-33173752 | None:intergenic | 35.0% | |
TTCTTCAGATGAAGGTTATC+AGG | + | chr2_4:33173848-33173867 | None:intergenic | 35.0% | |
CAAAAAGCTTCTTCAGATGA+AGG | + | chr2_4:33173856-33173875 | None:intergenic | 35.0% | |
! | GGTTTGATTAAGCTGATTCT+CGG | - | chr2_4:33174061-33174080 | Msa0325540:intron | 35.0% |
CAACTTCTGGATGAAAAACT+TGG | + | chr2_4:33174272-33174291 | None:intergenic | 35.0% | |
! | CAAGTTTTTCATCCAGAAGT+TGG | - | chr2_4:33174270-33174289 | Msa0325540:intron | 35.0% |
CAACGTGATCAATTCAGATA+GGG | + | chr2_4:33174389-33174408 | None:intergenic | 35.0% | |
CTATCTGAATTGATCACGTT+GGG | - | chr2_4:33174388-33174407 | Msa0325540:intron | 35.0% | |
! | AAACATGCAGATTTTCTGTG+AGG | - | chr2_4:33174462-33174481 | Msa0325540:CDS | 35.0% |
GGTTTGTGAGAACTATGTTA+AGG | - | chr2_4:33174619-33174638 | Msa0325540:five_prime_UTR | 35.0% | |
GGAAGCAAAATATTGTTGAC+AGG | + | chr2_4:33174677-33174696 | None:intergenic | 35.0% | |
! | ATTTGATGGCCTTTACAACA+TGG | - | chr2_4:33174705-33174724 | Msa0325540:five_prime_UTR | 35.0% |
TAACCATTCTTCTTCACAGC+TGG | - | chr2_4:33168280-33168299 | Msa0325540:three_prime_UTR | 40.0% | |
AGCATGTTGAAGAGATACGA+AGG | - | chr2_4:33168345-33168364 | Msa0325540:three_prime_UTR | 40.0% | |
CGAAGGACAAAGTTCTCTAT+TGG | - | chr2_4:33168362-33168381 | Msa0325540:three_prime_UTR | 40.0% | |
AGGACAAAGTTCTCTATTGG+TGG | - | chr2_4:33168365-33168384 | Msa0325540:three_prime_UTR | 40.0% | |
GGACAAAGTTCTCTATTGGT+GGG | - | chr2_4:33168366-33168385 | Msa0325540:three_prime_UTR | 40.0% | |
GAATCCTAATCCTTTGACTG+AGG | - | chr2_4:33168388-33168407 | Msa0325540:three_prime_UTR | 40.0% | |
AGATCCTCAGTCAAAGGATT+AGG | + | chr2_4:33168395-33168414 | None:intergenic | 40.0% | |
TGATGAAGATCCTCAGTCAA+AGG | + | chr2_4:33168401-33168420 | None:intergenic | 40.0% | |
GATCGCATGATTCTGGATAT+AGG | + | chr2_4:33168726-33168745 | None:intergenic | 40.0% | |
AAAACACGATCGCATGATTC+TGG | + | chr2_4:33168733-33168752 | None:intergenic | 40.0% | |
!! | CATGCGATCGTGTTTTTATG+AGG | - | chr2_4:33168737-33168756 | Msa0325540:CDS | 40.0% |
!! | TGCGATCGTGTTTTTATGAG+GGG | - | chr2_4:33168739-33168758 | Msa0325540:CDS | 40.0% |
ATTCCAGCTGTGTACATACT+AGG | - | chr2_4:33169101-33169120 | Msa0325540:CDS | 40.0% | |
ATACCTAGTATGTACACAGC+TGG | + | chr2_4:33169107-33169126 | None:intergenic | 40.0% | |
GCTGTGTACATACTAGGTAT+TGG | - | chr2_4:33169107-33169126 | Msa0325540:CDS | 40.0% | |
GTTATGACAAACTCAAGTGC+TGG | + | chr2_4:33169264-33169283 | None:intergenic | 40.0% | |
TCTGATGACATTACTGCTAC+TGG | - | chr2_4:33169285-33169304 | Msa0325540:CDS | 40.0% | |
ATTGAGTCCATATGCAGTGT+TGG | - | chr2_4:33169363-33169382 | Msa0325540:CDS | 40.0% | |
GTTGGAAGATCCACAAAGAA+AGG | - | chr2_4:33169381-33169400 | Msa0325540:CDS | 40.0% | |
GATCCACAAAGAAAGGCAAT+AGG | - | chr2_4:33169388-33169407 | Msa0325540:CDS | 40.0% | |
AATAGGAGCAGTGGTTACAT+AGG | - | chr2_4:33169405-33169424 | Msa0325540:CDS | 40.0% | |
AGTGGTTACATAGGAGAGAA+AGG | - | chr2_4:33169414-33169433 | Msa0325540:CDS | 40.0% | |
TGTGTACTTTGGACTCAAGA+TGG | - | chr2_4:33169475-33169494 | Msa0325540:CDS | 40.0% | |
ATTACGCTTGACTGTGAAGT+AGG | - | chr2_4:33169582-33169601 | Msa0325540:intron | 40.0% | |
TTACGCTTGACTGTGAAGTA+GGG | - | chr2_4:33169583-33169602 | Msa0325540:intron | 40.0% | |
! | TGGTTTCAAGAGTGTGTTTC+TGG | - | chr2_4:33169685-33169704 | Msa0325540:CDS | 40.0% |
GCTAAAAATATACGGCTGCA+TGG | + | chr2_4:33169714-33169733 | None:intergenic | 40.0% | |
ATATACCCAAGACTGCAATG+TGG | + | chr2_4:33169773-33169792 | None:intergenic | 40.0% | |
!! | TATAGTTCCTGAATGGGTTG+AGG | - | chr2_4:33169790-33169809 | Msa0325540:CDS | 40.0% |
AGACAATGGTTGTAGTTGGA+AGG | + | chr2_4:33169865-33169884 | None:intergenic | 40.0% | |
TTAACAGGGTTGACCTTATC+CGG | + | chr2_4:33169899-33169918 | None:intergenic | 40.0% | |
! | CTTGAAAGCTGCTGTTTAAC+AGG | + | chr2_4:33169914-33169933 | None:intergenic | 40.0% |
CAGTAACTTCTCTAACCGAA+AGG | + | chr2_4:33169979-33169998 | None:intergenic | 40.0% | |
GCAGTTATAGTGTTCTGTGT+GGG | + | chr2_4:33170007-33170026 | None:intergenic | 40.0% | |
AGCAGTTATAGTGTTCTGTG+TGG | + | chr2_4:33170008-33170027 | None:intergenic | 40.0% | |
CATGTGGAAGCAAAAGTTTC+CGG | - | chr2_4:33170144-33170163 | Msa0325540:CDS | 40.0% | |
GGTCAGAAAATGTGGTTGAA+AGG | - | chr2_4:33170170-33170189 | Msa0325540:CDS | 40.0% | |
GGAGAACAGATGTTGAAGAA+TGG | - | chr2_4:33170191-33170210 | Msa0325540:CDS | 40.0% | |
TATGAAGCCTCTCCTGATTT+GGG | + | chr2_4:33170234-33170253 | None:intergenic | 40.0% | |
AAATCAGGAGAGGCTTCATA+GGG | - | chr2_4:33170234-33170253 | Msa0325540:CDS | 40.0% | |
TGCATTTCTTCCTACAGAGA+TGG | - | chr2_4:33170279-33170298 | Msa0325540:CDS | 40.0% | |
! | ATTTTGTCCTTGCCTCATCT+AGG | - | chr2_4:33170332-33170351 | Msa0325540:CDS | 40.0% |
! | TTTTGTCCTTGCCTCATCTA+GGG | - | chr2_4:33170333-33170352 | Msa0325540:CDS | 40.0% |
ATCTAGGGAGACAATTCTCT+TGG | - | chr2_4:33170348-33170367 | Msa0325540:CDS | 40.0% | |
GAACACATTCAAGTATCCCT+TGG | + | chr2_4:33170387-33170406 | None:intergenic | 40.0% | |
ATACGAGCCAAACTTGATAC+CGG | + | chr2_4:33170463-33170482 | None:intergenic | 40.0% | |
CTCAAATGGCGAACTTTCAA+TGG | + | chr2_4:33170500-33170519 | None:intergenic | 40.0% | |
TGCTCTGTGTATGTCTCTAT+CGG | + | chr2_4:33170580-33170599 | None:intergenic | 40.0% | |
!! | TATTTTGAGTAAAGCCCGAG+AGG | - | chr2_4:33170654-33170673 | Msa0325540:CDS | 40.0% |
GCACTTTGCATACCAATCAA+CGG | + | chr2_4:33170794-33170813 | None:intergenic | 40.0% | |
! | CATCCAGAGTTCTAATCTTG+TGG | - | chr2_4:33170813-33170832 | Msa0325540:CDS | 40.0% |
CATCCACAAGATTAGAACTC+TGG | + | chr2_4:33170819-33170838 | None:intergenic | 40.0% | |
! | CAGAGTTCTAATCTTGTGGA+TGG | - | chr2_4:33170817-33170836 | Msa0325540:CDS | 40.0% |
GTCAGTCTAATGCTTGTTCA+TGG | - | chr2_4:33171034-33171053 | Msa0325540:CDS | 40.0% | |
CTTGTTCATGGCTGATCAAT+TGG | - | chr2_4:33171046-33171065 | Msa0325540:CDS | 40.0% | |
ATGGCTGATCAATTGGAACA+AGG | - | chr2_4:33171053-33171072 | Msa0325540:CDS | 40.0% | |
TATGCCAGAAAACACGCAAA+AGG | - | chr2_4:33171104-33171123 | Msa0325540:CDS | 40.0% | |
! | ATAGCCTTTTGCGTGTTTTC+TGG | + | chr2_4:33171111-33171130 | None:intergenic | 40.0% |
GCAAAAGGCTATCTTGAGAT+TGG | - | chr2_4:33171119-33171138 | Msa0325540:CDS | 40.0% | |
TTCCATCAAAGTCTGCTTCT+GGG | + | chr2_4:33171145-33171164 | None:intergenic | 40.0% | |
ATTCCATCAAAGTCTGCTTC+TGG | + | chr2_4:33171146-33171165 | None:intergenic | 40.0% | |
AGAAGCAGACTTTGATGGAA+TGG | - | chr2_4:33171145-33171164 | Msa0325540:CDS | 40.0% | |
AAGAGAACTGCATAGGACAT+TGG | + | chr2_4:33171217-33171236 | None:intergenic | 40.0% | |
CGTGTCACAGAAACAAGAAA+AGG | - | chr2_4:33171363-33171382 | Msa0325540:CDS | 40.0% | |
! | AAATTGGCCTGCATAAGATG+AGG | + | chr2_4:33171490-33171509 | None:intergenic | 40.0% |
TCTTATGCAGGCCAATTTAC+AGG | - | chr2_4:33171492-33171511 | Msa0325540:CDS | 40.0% | |
GCATTTGGAGGAGATATAAG+AGG | + | chr2_4:33171570-33171589 | None:intergenic | 40.0% | |
CTTATATCTCCTCCAAATGC+TGG | - | chr2_4:33171570-33171589 | Msa0325540:CDS | 40.0% | |
AGGAGGACTGTATCCATTAA+CGG | + | chr2_4:33171736-33171755 | None:intergenic | 40.0% | |
TTCTTAATTCGCTCGCCATT+GGG | - | chr2_4:33171765-33171784 | Msa0325540:CDS | 40.0% | |
TAGAAGCTCTCATCAATGAG+GGG | + | chr2_4:33171828-33171847 | None:intergenic | 40.0% | |
CATAGAAGCTCTCATCAATG+AGG | + | chr2_4:33171830-33171849 | None:intergenic | 40.0% | |
CTCATTGATGAGAGCTTCTA+TGG | - | chr2_4:33171828-33171847 | Msa0325540:CDS | 40.0% | |
CATTGATGAGAGCTTCTATG+GGG | - | chr2_4:33171830-33171849 | Msa0325540:CDS | 40.0% | |
TTTACATGCTTCCTCACAAC+TGG | + | chr2_4:33171904-33171923 | None:intergenic | 40.0% | |
GAAGACTTCTCCTGAGATAT+TGG | + | chr2_4:33172007-33172026 | None:intergenic | 40.0% | |
TAAAGACATCTGAAGGTCTC+AGG | - | chr2_4:33172072-33172091 | Msa0325540:CDS | 40.0% | |
CTGTATTGAATGATTCCGGA+TGG | - | chr2_4:33172108-33172127 | Msa0325540:CDS | 40.0% | |
TGATCAAGCTTACTTTGGTG+AGG | - | chr2_4:33172166-33172185 | Msa0325540:CDS | 40.0% | |
AATGAGGAGCTGAAGTTGTT+GGG | - | chr2_4:33172203-33172222 | Msa0325540:CDS | 40.0% | |
GTCAAAGAGGCCAAATTTGA+GGG | + | chr2_4:33172284-33172303 | None:intergenic | 40.0% | |
TGTCAAAGAGGCCAAATTTG+AGG | + | chr2_4:33172285-33172304 | None:intergenic | 40.0% | |
AAGCTGCTTGAAGACAAACA+TGG | - | chr2_4:33172385-33172404 | Msa0325540:CDS | 40.0% | |
AGCTGCTTGAAGACAAACAT+GGG | - | chr2_4:33172386-33172405 | Msa0325540:CDS | 40.0% | |
TTTCTTGTATGACCAGACGT+GGG | - | chr2_4:33172430-33172449 | Msa0325540:CDS | 40.0% | |
TGAACTGAAAAAAATCGGCG+TGG | - | chr2_4:33172532-33172551 | Msa0325540:CDS | 40.0% | |
TGCTTCTCTCTTCAAACAGA+AGG | - | chr2_4:33172586-33172605 | Msa0325540:CDS | 40.0% | |
TCAGAAGTGGCTGTATACTA+AGG | - | chr2_4:33172721-33172740 | Msa0325540:CDS | 40.0% | |
AAGTGGCTGTATACTAAGGT+TGG | - | chr2_4:33172725-33172744 | Msa0325540:CDS | 40.0% | |
TGTCACTGTCGTCAATGAAA+GGG | + | chr2_4:33172823-33172842 | None:intergenic | 40.0% | |
TTGTCACTGTCGTCAATGAA+AGG | + | chr2_4:33172824-33172843 | None:intergenic | 40.0% | |
AAGGAAGAACTGAAGATCCT+TGG | - | chr2_4:33172872-33172891 | Msa0325540:CDS | 40.0% | |
!! | AAGATCCTTGGTGTTGTTAC+TGG | - | chr2_4:33172884-33172903 | Msa0325540:CDS | 40.0% |
TCAATCCAGTAACAACACCA+AGG | + | chr2_4:33172892-33172911 | None:intergenic | 40.0% | |
AATTGGTTGAAGACACATGC+TGG | - | chr2_4:33173070-33173089 | Msa0325540:CDS | 40.0% | |
! | TGAAGACACATGCTGGTTAT+AGG | - | chr2_4:33173077-33173096 | Msa0325540:CDS | 40.0% |
TCAATAAAAGGCCCATCAGT+TGG | + | chr2_4:33173154-33173173 | None:intergenic | 40.0% | |
CAAAAAGAGACACAGCATGT+GGG | + | chr2_4:33173340-33173359 | None:intergenic | 40.0% | |
TCAAAGAGAGTTAAGGTGAC+TGG | + | chr2_4:33173374-33173393 | None:intergenic | 40.0% | |
GGTACTTGTCTGAATACAAC+TGG | - | chr2_4:33173420-33173439 | Msa0325540:intron | 40.0% | |
TGAATACAACTGGAAACCTG+AGG | - | chr2_4:33173430-33173449 | Msa0325540:intron | 40.0% | |
! | CATGACCCTGATAAGCTTTT+TGG | - | chr2_4:33173530-33173549 | Msa0325540:CDS | 40.0% |
TCCTTTCTTTACCTTTGCCA+TGG | - | chr2_4:33173598-33173617 | Msa0325540:CDS | 40.0% | |
TCCATGGCAAAGGTAAAGAA+AGG | + | chr2_4:33173602-33173621 | None:intergenic | 40.0% | |
GAATGAATGGGAGAGTTCAT+TGG | - | chr2_4:33173664-33173683 | Msa0325540:CDS | 40.0% | |
!! | ATGACAAGTGCTGGAAATTC+TGG | - | chr2_4:33173699-33173718 | Msa0325540:intron | 40.0% |
AGCAAACTACCTGTAACAAC+AGG | - | chr2_4:33173779-33173798 | Msa0325540:intron | 40.0% | |
! | AAGCAAGGAGATATTTCTGC+TGG | - | chr2_4:33173802-33173821 | Msa0325540:intron | 40.0% |
!! | TCTGAAGAAGCTTTTTGAGC+AGG | - | chr2_4:33173859-33173878 | Msa0325540:intron | 40.0% |
! | AGCAGGAGAAGATTTTTGTG+TGG | - | chr2_4:33173876-33173895 | Msa0325540:intron | 40.0% |
GAATCTTCCTTGCTGAATGA+TGG | - | chr2_4:33173998-33174017 | Msa0325540:intron | 40.0% | |
TTGAACACCATCATTCAGCA+AGG | + | chr2_4:33174008-33174027 | None:intergenic | 40.0% | |
TGCTTGTTCTAGCCTGAAAA+TGG | - | chr2_4:33174090-33174109 | Msa0325540:intron | 40.0% | |
!! | TCTTGTCTGGTTCCATTTTC+AGG | + | chr2_4:33174105-33174124 | None:intergenic | 40.0% |
TGAAAATGGAACCAGACAAG+AGG | - | chr2_4:33174104-33174123 | Msa0325540:intron | 40.0% | |
! | AAGAGGCATGAAGTTGTTCA+AGG | - | chr2_4:33174121-33174140 | Msa0325540:intron | 40.0% |
TATAGCCTATCACTGTCATC+AGG | - | chr2_4:33174193-33174212 | Msa0325540:intron | 40.0% | |
ATAGCCTATCACTGTCATCA+GGG | - | chr2_4:33174194-33174213 | Msa0325540:intron | 40.0% | |
AAGATGACAAAATGGTTCGC+TGG | - | chr2_4:33174233-33174252 | Msa0325540:intron | 40.0% | |
AGATGACAAAATGGTTCGCT+GGG | - | chr2_4:33174234-33174253 | Msa0325540:intron | 40.0% | |
TATTTCAGTGCATTTCCCTG+CGG | + | chr2_4:33174301-33174320 | None:intergenic | 40.0% | |
CCAACGTGATCAATTCAGAT+AGG | + | chr2_4:33174390-33174409 | None:intergenic | 40.0% | |
CCTATCTGAATTGATCACGT+TGG | - | chr2_4:33174387-33174406 | Msa0325540:intron | 40.0% | |
GAACAAAGGCCATGTTGTAA+AGG | + | chr2_4:33174717-33174736 | None:intergenic | 40.0% | |
ACACAGTGAAGACTCCTTCT+TGG | + | chr2_4:33168233-33168252 | None:intergenic | 45.0% | |
GTACCAGCTGTGAAGAAGAA+TGG | + | chr2_4:33168286-33168305 | None:intergenic | 45.0% | |
GCTTCACTCCCTCATTATAG+TGG | + | chr2_4:33169242-33169261 | None:intergenic | 45.0% | |
GGATCTTCCAACACTGCATA+TGG | + | chr2_4:33169373-33169392 | None:intergenic | 45.0% | |
GCTCCTATTGCCTTTCTTTG+TGG | + | chr2_4:33169394-33169413 | None:intergenic | 45.0% | |
AAGAAAGGCAATAGGAGCAG+TGG | - | chr2_4:33169396-33169415 | Msa0325540:CDS | 45.0% | |
CTTGTCCACATTGCAGTCTT+GGG | - | chr2_4:33169765-33169784 | Msa0325540:CDS | 45.0% | |
TGCTTTATGTCAGCAAGGGT+TGG | + | chr2_4:33169821-33169840 | None:intergenic | 45.0% | |
GGCAAGACAATGGTTGTAGT+TGG | + | chr2_4:33169869-33169888 | None:intergenic | 45.0% | |
! | AAGAGTGCAGCTACTACATG+TGG | - | chr2_4:33170128-33170147 | Msa0325540:CDS | 45.0% |
! | ACCACATTTTCTGACCTGAC+CGG | + | chr2_4:33170166-33170185 | None:intergenic | 45.0% |
!! | TGAAGAATGGGTTGTGACAC+TGG | - | chr2_4:33170204-33170223 | Msa0325540:CDS | 45.0% |
CTATGAAGCCTCTCCTGATT+TGG | + | chr2_4:33170235-33170254 | None:intergenic | 45.0% | |
CAAATCAGGAGAGGCTTCAT+AGG | - | chr2_4:33170233-33170252 | Msa0325540:CDS | 45.0% | |
AATCAGGAGAGGCTTCATAG+GGG | - | chr2_4:33170235-33170254 | Msa0325540:CDS | 45.0% | |
ATAGGGGTAAAAGCTCACCA+GGG | - | chr2_4:33170251-33170270 | Msa0325540:CDS | 45.0% | |
GAGAATTGTCTCCCTAGATG+AGG | + | chr2_4:33170347-33170366 | None:intergenic | 45.0% | |
ATGTGTTCCATCGGCCTTTA+TGG | - | chr2_4:33170399-33170418 | Msa0325540:CDS | 45.0% | |
AATGCATCCATAAAGGCCGA+TGG | + | chr2_4:33170409-33170428 | None:intergenic | 45.0% | |
ACTTGATACCGGAGCTTGAT+CGG | + | chr2_4:33170452-33170471 | None:intergenic | 45.0% | |
TCAAGCTCCGGTATCAAGTT+TGG | - | chr2_4:33170453-33170472 | Msa0325540:CDS | 45.0% | |
ATGGCGAACTTTCAATGGGA+AGG | + | chr2_4:33170495-33170514 | None:intergenic | 45.0% | |
!! | CAGAAGCACTTCTATAAGCC+TGG | - | chr2_4:33170598-33170617 | Msa0325540:CDS | 45.0% |
! | ATAAGCCTGGTGACGTTAGT+AGG | - | chr2_4:33170611-33170630 | Msa0325540:CDS | 45.0% |
CAAGTACACTTCTTCCTCTC+GGG | + | chr2_4:33170671-33170690 | None:intergenic | 45.0% | |
GCAAGTACACTTCTTCCTCT+CGG | + | chr2_4:33170672-33170691 | None:intergenic | 45.0% | |
! | ACCTATCTTCTCATGATGGG+AGG | - | chr2_4:33170695-33170714 | Msa0325540:CDS | 45.0% |
TCCTCCCATCATGAGAAGAT+AGG | + | chr2_4:33170699-33170718 | None:intergenic | 45.0% | |
! | GAAGTATTTGTCAAAGCGGG+AGG | - | chr2_4:33171296-33171315 | Msa0325540:CDS | 45.0% |
ATGCCACTCGTTGACAACTA+TGG | - | chr2_4:33171339-33171358 | Msa0325540:CDS | 45.0% | |
TGCCACTCGTTGACAACTAT+GGG | - | chr2_4:33171340-33171359 | Msa0325540:CDS | 45.0% | |
TGCCTGCAAATGTGAGCAAA+TGG | - | chr2_4:33171394-33171413 | Msa0325540:CDS | 45.0% | |
GCCTGCAAATGTGAGCAAAT+GGG | - | chr2_4:33171395-33171414 | Msa0325540:CDS | 45.0% | |
ACAGCTGAAAACCCAGCATT+TGG | + | chr2_4:33171585-33171604 | None:intergenic | 45.0% | |
! | ATTCGGAATCTGAAGCACAG+AGG | - | chr2_4:33171651-33171670 | Msa0325540:CDS | 45.0% |
GTTCTTAATTCGCTCGCCAT+TGG | - | chr2_4:33171764-33171783 | Msa0325540:CDS | 45.0% | |
ACAGCATCAGAGATGAACCT+TGG | - | chr2_4:33172048-33172067 | Msa0325540:CDS | 45.0% | |
CCTTCAGATGTCTTTAGCCA+AGG | + | chr2_4:33172068-33172087 | None:intergenic | 45.0% | |
CCTTGGCTAAAGACATCTGA+AGG | - | chr2_4:33172065-33172084 | Msa0325540:CDS | 45.0% | |
!! | TTGCGATGCTACTTTCCATC+CGG | + | chr2_4:33172126-33172145 | None:intergenic | 45.0% |
CAATGAGGAGCTGAAGTTGT+TGG | - | chr2_4:33172202-33172221 | Msa0325540:CDS | 45.0% | |
AAGTTGTTGGGAGTGGTAGT+TGG | - | chr2_4:33172215-33172234 | Msa0325540:CDS | 45.0% | |
TTTGGCCTCTTTGACAGTTG+AGG | - | chr2_4:33172289-33172308 | Msa0325540:CDS | 45.0% | |
AACAGCCTCAACTGTCAAAG+AGG | + | chr2_4:33172297-33172316 | None:intergenic | 45.0% | |
GTTTCTTGTATGACCAGACG+TGG | - | chr2_4:33172429-33172448 | Msa0325540:CDS | 45.0% | |
TTCTTGTATGACCAGACGTG+GGG | - | chr2_4:33172431-33172450 | Msa0325540:CDS | 45.0% | |
!!! | ATCGGCGTGGTTGTTGATTT+TGG | - | chr2_4:33172545-33172564 | Msa0325540:CDS | 45.0% |
! | GCATTTTATATGGTCCGGAG+TGG | - | chr2_4:33172771-33172790 | Msa0325540:CDS | 45.0% |
! | TAATGGTGGAGGGATCTGAA+GGG | + | chr2_4:33172952-33172971 | None:intergenic | 45.0% |
! | CTTTCAGGAGTAATGGTGGA+GGG | + | chr2_4:33172962-33172981 | None:intergenic | 45.0% |
ACTTTCAGGAGTAATGGTGG+AGG | + | chr2_4:33172963-33172982 | None:intergenic | 45.0% | |
CACACTTTCAGGAGTAATGG+TGG | + | chr2_4:33172966-33172985 | None:intergenic | 45.0% | |
AACAGCAAACACATCTCTGG+AGG | + | chr2_4:33173103-33173122 | None:intergenic | 45.0% | |
GCAAAAAGAGACACAGCATG+TGG | + | chr2_4:33173341-33173360 | None:intergenic | 45.0% | |
! | TTCTTGGCAGCTTTATCCTC+AGG | + | chr2_4:33173449-33173468 | None:intergenic | 45.0% |
GTACGATGCATTCTTCAGAG+AGG | + | chr2_4:33173511-33173530 | None:intergenic | 45.0% | |
TTACCTTTGCCATGGAAGTC+AGG | - | chr2_4:33173606-33173625 | Msa0325540:CDS | 45.0% | |
TACCTTTGCCATGGAAGTCA+GGG | - | chr2_4:33173607-33173626 | Msa0325540:CDS | 45.0% | |
AATTGTCGCATGACAAGTGC+TGG | - | chr2_4:33173690-33173709 | Msa0325540:CDS | 45.0% | |
CAGAGAAGAAACTTTCGGAG+AGG | - | chr2_4:33173753-33173772 | Msa0325540:intron | 45.0% | |
ACCTGTAACAACAGGAAGCA+AGG | - | chr2_4:33173787-33173806 | Msa0325540:intron | 45.0% | |
TCCTTGCTTCCTGTTGTTAC+AGG | + | chr2_4:33173791-33173810 | None:intergenic | 45.0% | |
! | TTTTGTGTGGTATCCTCAGC+AGG | - | chr2_4:33173889-33173908 | Msa0325540:intron | 45.0% |
ACAACTTCATGCCTCTTGTC+TGG | + | chr2_4:33174118-33174137 | None:intergenic | 45.0% | |
TAGCCTATCACTGTCATCAG+GGG | - | chr2_4:33174195-33174214 | Msa0325540:intron | 45.0% | |
ACAAAATGGTTCGCTGGGAA+AGG | - | chr2_4:33174239-33174258 | Msa0325540:intron | 45.0% | |
GTGATCAATTCAGATAGGGC+AGG | + | chr2_4:33174385-33174404 | None:intergenic | 45.0% | |
CCAAGACTGCAATGTGGACA+AGG | + | chr2_4:33169767-33169786 | None:intergenic | 50.0% | |
CCTTGTCCACATTGCAGTCT+TGG | - | chr2_4:33169764-33169783 | Msa0325540:CDS | 50.0% | |
TTGACCTTATCCGGCTTCAG+GGG | + | chr2_4:33169890-33169909 | None:intergenic | 50.0% | |
GTTGACCTTATCCGGCTTCA+GGG | + | chr2_4:33169891-33169910 | None:intergenic | 50.0% | |
CACACTACATCTCTCCACAG+AGG | - | chr2_4:33170087-33170106 | Msa0325540:CDS | 50.0% | |
GGAAGCAAAAGTTTCCGGTC+AGG | - | chr2_4:33170149-33170168 | Msa0325540:CDS | 50.0% | |
TCCGGTCAGGTCAGAAAATG+TGG | - | chr2_4:33170162-33170181 | Msa0325540:CDS | 50.0% | |
!! | AAGCCTCTCCTGATTTGGGA+AGG | + | chr2_4:33170230-33170249 | None:intergenic | 50.0% |
CATAGGGGTAAAAGCTCACC+AGG | - | chr2_4:33170250-33170269 | Msa0325540:CDS | 50.0% | |
TAGGGGTAAAAGCTCACCAG+GGG | - | chr2_4:33170252-33170271 | Msa0325540:CDS | 50.0% | |
GGAAGAAATGCATAGACCCC+TGG | + | chr2_4:33170271-33170290 | None:intergenic | 50.0% | |
TTGTCTCCCTAGATGAGGCA+AGG | + | chr2_4:33170342-33170361 | None:intergenic | 50.0% | |
TGTAGGATCCGATCAAGCTC+CGG | - | chr2_4:33170441-33170460 | Msa0325540:CDS | 50.0% | |
GTAGGCTGCTGTCTGAATTC+TGG | - | chr2_4:33170629-33170648 | Msa0325540:CDS | 50.0% | |
GAATGCACACAGCACTATGC+AGG | - | chr2_4:33170982-33171001 | Msa0325540:CDS | 50.0% | |
GCCCATTTGCTCACATTTGC+AGG | + | chr2_4:33171399-33171418 | None:intergenic | 50.0% | |
GCAGGCCAATTTACAGGTTC+CGG | - | chr2_4:33171498-33171517 | Msa0325540:CDS | 50.0% | |
CAGGCCAATTTACAGGTTCC+GGG | - | chr2_4:33171499-33171518 | Msa0325540:CDS | 50.0% | |
GCTTCCCGGAACCTGTAAAT+TGG | + | chr2_4:33171506-33171525 | None:intergenic | 50.0% | |
GCTGAAAACCCAGCATTTGG+AGG | + | chr2_4:33171582-33171601 | None:intergenic | 50.0% | |
TGGAGTGATGTCCAGTTGTG+AGG | - | chr2_4:33171890-33171909 | Msa0325540:CDS | 50.0% | |
CAGGAGAAGTCTTCTCCCAT+TGG | - | chr2_4:33172013-33172032 | Msa0325540:CDS | 50.0% | |
TTCATGTTGCAGGCTGCTGA+AGG | - | chr2_4:33172652-33172671 | Msa0325540:CDS | 50.0% | |
TCATGTTGCAGGCTGCTGAA+GGG | - | chr2_4:33172653-33172672 | Msa0325540:CDS | 50.0% | |
CTGGATTGAAACATGGCGTG+AGG | - | chr2_4:33172903-33172922 | Msa0325540:CDS | 50.0% | |
! | GTAATGGTGGAGGGATCTGA+AGG | + | chr2_4:33172953-33172972 | None:intergenic | 50.0% |
GTCACCACTGACCTAGAGAA+AGG | - | chr2_4:33173232-33173251 | Msa0325540:CDS | 50.0% | |
GCATCCTTTCTCTAGGTCAG+TGG | + | chr2_4:33173239-33173258 | None:intergenic | 50.0% | |
!! | GCAAGGAGCATCCTTTCTCT+AGG | + | chr2_4:33173246-33173265 | None:intergenic | 50.0% |
AAAGGATGCTCCTTGCTTGC+AGG | - | chr2_4:33173250-33173269 | Msa0325540:intron | 50.0% | |
CGCTGTCAGAGAGAATCTCA+AGG | + | chr2_4:33173279-33173298 | None:intergenic | 50.0% | |
! | TGGATTCCCAATGGCACTGA+AGG | - | chr2_4:33173473-33173492 | Msa0325540:intron | 50.0% |
! | ATTCCCAATGGCACTGAAGG+TGG | - | chr2_4:33173476-33173495 | Msa0325540:intron | 50.0% |
! | TGTCCACCTTCAGTGCCATT+GGG | + | chr2_4:33173482-33173501 | None:intergenic | 50.0% |
TGGTATCCTCAGCAGGACTT+TGG | - | chr2_4:33173896-33173915 | Msa0325540:intron | 50.0% | |
GGTATCCTCAGCAGGACTTT+GGG | - | chr2_4:33173897-33173916 | Msa0325540:intron | 50.0% | |
TCTCAACCTGAGCTTCCTTG+AGG | - | chr2_4:33174147-33174166 | Msa0325540:intron | 50.0% | |
CTTCCTTGAGGCAAAGGTCT+CGG | - | chr2_4:33174159-33174178 | Msa0325540:intron | 50.0% | |
TGTCCCCTGATGACAGTGAT+AGG | + | chr2_4:33174201-33174220 | None:intergenic | 50.0% | |
TGCAGAATCCTCAGCCAGAA+GGG | + | chr2_4:33174513-33174532 | None:intergenic | 50.0% | |
ATGCAGAATCCTCAGCCAGA+AGG | + | chr2_4:33174514-33174533 | None:intergenic | 50.0% | |
GGCTTCTCCTCAACCCATTC+AGG | + | chr2_4:33169800-33169819 | None:intergenic | 55.0% | |
CATTGTCTTGCCCCTGAAGC+CGG | - | chr2_4:33169877-33169896 | Msa0325540:CDS | 55.0% | |
GGTTGACCTTATCCGGCTTC+AGG | + | chr2_4:33169892-33169911 | None:intergenic | 55.0% | |
!! | GACACTGGCCTTCCCAAATC+AGG | - | chr2_4:33170219-33170238 | Msa0325540:CDS | 55.0% |
TGGCCTTCCCAAATCAGGAG+AGG | - | chr2_4:33170224-33170243 | Msa0325540:CDS | 55.0% | |
AGCAGCCTACTAACGTCACC+AGG | + | chr2_4:33170619-33170638 | None:intergenic | 55.0% | |
GGCCCAGAAGCAGACTTTGA+TGG | - | chr2_4:33171140-33171159 | Msa0325540:CDS | 55.0% | |
CGCCCATAGTTGTCAACGAG+TGG | + | chr2_4:33171345-33171364 | None:intergenic | 55.0% | |
GAAGGTCTCAGGTCTCCTGT+TGG | - | chr2_4:33172083-33172102 | Msa0325540:CDS | 55.0% | |
GGAGCTGAAGTTGTTGGGAG+TGG | - | chr2_4:33172208-33172227 | Msa0325540:CDS | 55.0% | |
CATGTTGCAGGCTGCTGAAG+GGG | - | chr2_4:33172654-33172673 | Msa0325540:CDS | 55.0% | |
CTCAAGGTGACCTGCAAGCA+AGG | + | chr2_4:33173263-33173282 | None:intergenic | 55.0% | |
CTGTCCACCTTCAGTGCCAT+TGG | + | chr2_4:33173483-33173502 | None:intergenic | 55.0% | |
! | ATGGCACTGAAGGTGGACAG+TGG | - | chr2_4:33173483-33173502 | Msa0325540:intron | 55.0% |
! | TGGCACTGAAGGTGGACAGT+GGG | - | chr2_4:33173484-33173503 | Msa0325540:intron | 55.0% |
AGCCCTGACTTCCATGGCAA+AGG | + | chr2_4:33173612-33173631 | None:intergenic | 55.0% | |
GGGTTTAGCCCTGACTTCCA+TGG | + | chr2_4:33173618-33173637 | None:intergenic | 55.0% | |
CCTTTGCCTCAAGGAAGCTC+AGG | + | chr2_4:33174156-33174175 | None:intergenic | 55.0% | |
CCTGAGCTTCCTTGAGGCAA+AGG | - | chr2_4:33174153-33174172 | Msa0325540:intron | 55.0% | |
TGACCGAGACCTTTGCCTCA+AGG | + | chr2_4:33174165-33174184 | None:intergenic | 55.0% | |
TGAGGCAAAGGTCTCGGTCA+CGG | - | chr2_4:33174165-33174184 | Msa0325540:intron | 55.0% | |
CAGAAGTTGGATGAGCCGCA+GGG | - | chr2_4:33174283-33174302 | Msa0325540:intron | 55.0% | |
CAGAAGGGAAGGCAGAACTG+AGG | + | chr2_4:33174498-33174517 | None:intergenic | 55.0% | |
CTCAGTTCTGCCTTCCCTTC+TGG | - | chr2_4:33174496-33174515 | Msa0325540:CDS | 55.0% | |
GAATCCTCAGCCAGAAGGGA+AGG | + | chr2_4:33174509-33174528 | None:intergenic | 55.0% | |
CGGCTTCAGGGGCAAGACAA+TGG | + | chr2_4:33169879-33169898 | None:intergenic | 60.0% | |
CTTGCCCCTGAAGCCGGATA+AGG | - | chr2_4:33169883-33169902 | Msa0325540:CDS | 60.0% | |
! | GAGGAGTGCACCTACCAGAG+AGG | - | chr2_4:33171670-33171689 | Msa0325540:CDS | 60.0% |
CCAAAATGCAGCCCCACGTC+TGG | + | chr2_4:33172445-33172464 | None:intergenic | 60.0% | |
! | CCAGACGTGGGGCTGCATTT+TGG | - | chr2_4:33172442-33172461 | Msa0325540:CDS | 60.0% |
GAAGGCCCAAAGTCCTGCTG+AGG | + | chr2_4:33173905-33173924 | None:intergenic | 60.0% | |
CCTGCGGCTCATCCAACTTC+TGG | + | chr2_4:33174285-33174304 | None:intergenic | 60.0% | |
CCAGAAGTTGGATGAGCCGC+AGG | - | chr2_4:33174282-33174301 | Msa0325540:intron | 60.0% | |
! | TCTGCCTTCCCTTCTGGCTG+AGG | - | chr2_4:33174502-33174521 | Msa0325540:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 33168190 | 33174749 | 33168190 | ID=Msa0325540;Name=Msa0325540 |
chr2_4 | mRNA | 33168190 | 33174749 | 33168190 | ID=Msa0325540-mRNA-1;Parent=Msa0325540;Name=Msa0325540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=139|1|1|1|1|1|4|227|1703 |
chr2_4 | exon | 33168190 | 33169518 | 33168190 | ID=Msa0325540-mRNA-1:exon:10726;Parent=Msa0325540-mRNA-1 |
chr2_4 | exon | 33169619 | 33173258 | 33169619 | ID=Msa0325540-mRNA-1:exon:10725;Parent=Msa0325540-mRNA-1 |
chr2_4 | exon | 33173504 | 33173714 | 33173504 | ID=Msa0325540-mRNA-1:exon:10724;Parent=Msa0325540-mRNA-1 |
chr2_4 | exon | 33174452 | 33174749 | 33174452 | ID=Msa0325540-mRNA-1:exon:10723;Parent=Msa0325540-mRNA-1 |
chr2_4 | five_prime_UTR | 33174611 | 33174749 | 33174611 | ID=Msa0325540-mRNA-1:five_prime_utr;Parent=Msa0325540-mRNA-1 |
chr2_4 | CDS | 33174452 | 33174610 | 33174452 | ID=Msa0325540-mRNA-1:cds;Parent=Msa0325540-mRNA-1 |
chr2_4 | CDS | 33173504 | 33173714 | 33173504 | ID=Msa0325540-mRNA-1:cds;Parent=Msa0325540-mRNA-1 |
chr2_4 | CDS | 33169619 | 33173258 | 33169619 | ID=Msa0325540-mRNA-1:cds;Parent=Msa0325540-mRNA-1 |
chr2_4 | CDS | 33168417 | 33169518 | 33168417 | ID=Msa0325540-mRNA-1:cds;Parent=Msa0325540-mRNA-1 |
chr2_4 | three_prime_UTR | 33168190 | 33168416 | 33168190 | ID=Msa0325540-mRNA-1:three_prime_utr;Parent=Msa0325540-mRNA-1 |
Gene Sequence |
Protein sequence |