Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0020370 | sp|Q949X7|DCDA1_ARATH | 79.707 | 478 | 90 | 3 | 12 | 484 | 9 | 484 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020370 | Msa0068040 | 0.858660 | 7.073030e-63 | -8.615850e-47 |
| Msa0020370 | Msa0159400 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
| Msa0020370 | Msa0371480 | 0.803462 | 3.446704e-49 | -8.615850e-47 |
| Msa0020370 | Msa0450160 | 0.813598 | 2.360551e-51 | -8.615850e-47 |
| Msa0020370 | Msa1160910 | 0.815807 | 7.650865e-52 | -8.615850e-47 |
| Msa0020370 | Msa1197180 | 0.829710 | 4.420197e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0020370 | MtrunA17_Chr5g0405861 | 97.107 | 484 | 13 | 1 | 1 | 484 | 1 | 483 | 0.0 | 965 |
| Msa0020370 | MtrunA17_Chr3g0143501 | 25.294 | 340 | 226 | 10 | 122 | 449 | 84 | 407 | 1.11e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0020370 | AT3G14390.1 | 79.707 | 478 | 90 | 3 | 12 | 484 | 9 | 484 | 0.0 | 791 |
| Msa0020370 | AT5G11880.1 | 77.664 | 488 | 99 | 4 | 4 | 484 | 5 | 489 | 0.0 | 782 |
Find 152 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGAGATTTGTTGTATTT+TGG | 0.151377 | 1_1:+35317660 | Msa0020370:three_prime_UTR |
| TGCTCAAGAATGTGATATTT+TGG | 0.153172 | 1_1:+35317698 | Msa0020370:three_prime_UTR |
| ATGGATAGGTGTATCTTTAA+TGG | 0.163164 | 1_1:+35313094 | Msa0020370:intron |
| TAATAATAATTACAAGATTT+TGG | 0.185695 | 1_1:+35312786 | Msa0020370:CDS |
| GAGGGAGAATGAGGAGGTTT+TGG | 0.188362 | 1_1:-35312489 | None:intergenic |
| TATTATTGGTTATGCTATTA+AGG | 0.194019 | 1_1:+35312762 | Msa0020370:CDS |
| TGTGGTTTCTGGTGGGGTTT+TGG | 0.196030 | 1_1:-35312560 | None:intergenic |
| GGGAATAAGAACTCTAAATT+TGG | 0.228344 | 1_1:+35314405 | Msa0020370:CDS |
| GAAGGGTTAACATCTATTAT+TGG | 0.248894 | 1_1:+35312748 | Msa0020370:CDS |
| TGGGAAAATCTTGGAGGATT+TGG | 0.271198 | 1_1:+35313120 | Msa0020370:CDS |
| AAAAGGTTTGATGGTGGATT+TGG | 0.281356 | 1_1:-35312518 | None:intergenic |
| AGGTGTATCTTTAATGGAAA+TGG | 0.285155 | 1_1:+35313100 | Msa0020370:intron |
| CATTGACAGTGAGTTTGATT+TGG | 0.288481 | 1_1:+35313174 | Msa0020370:CDS |
| CATGACAGACATTGCTTTGC+GGG | 0.299279 | 1_1:-35311674 | None:intergenic |
| CAGGGATGCGGCCACTATTA+TGG | 0.309551 | 1_1:+35314789 | Msa0020370:CDS |
| AAACCAGCCAAGAAACAAAA+AGG | 0.310902 | 1_1:+35312241 | Msa0020370:intron |
| CACAGTATCAATTAGATCTC+TGG | 0.317391 | 1_1:-35314920 | None:intergenic |
| TTGAATATCGGTGGTGGACT+TGG | 0.318965 | 1_1:+35314859 | Msa0020370:CDS |
| TCAATTAGATCTCTGGGTTT+AGG | 0.324394 | 1_1:-35314913 | None:intergenic |
| CCTGTTGAGCTAAAGCTTGT+AGG | 0.331964 | 1_1:+35314477 | Msa0020370:CDS |
| TGTGGTGCTGTTCTTGTTAG+TGG | 0.338052 | 1_1:+35312829 | Msa0020370:CDS |
| AAGTCTCTATGATGCTTATC+AGG | 0.346969 | 1_1:+35315422 | Msa0020370:CDS |
| TTGTGAGTCTGCAGATTTCT+TGG | 0.348034 | 1_1:+35316506 | Msa0020370:CDS |
| GAAGTTGATTATTTGAATAT+CGG | 0.349143 | 1_1:+35314847 | Msa0020370:CDS |
| CCTACAAGCTTTAGCTCAAC+AGG | 0.349919 | 1_1:-35314477 | None:intergenic |
| GAATGAGTGATTGAAGGTTT+TGG | 0.353491 | 1_1:-35312449 | None:intergenic |
| TCGCAAGGTGGATGAGATTA+TGG | 0.355259 | 1_1:+35312645 | Msa0020370:CDS |
| CGTGAAAGAGAATAGAATTC+AGG | 0.361943 | 1_1:-35311703 | None:intergenic |
| CTGTTGAGCTAAAGCTTGTA+GGG | 0.386673 | 1_1:+35314478 | Msa0020370:CDS |
| GAGTTTCATTTGCAGGGTAC+TGG | 0.388546 | 1_1:+35317065 | Msa0020370:intron |
| TTGGTCTTGGCTGCCGAAGC+AGG | 0.391605 | 1_1:+35313139 | Msa0020370:CDS |
| CATTGTGATTGATGGAAGTA+TGG | 0.392518 | 1_1:+35315383 | Msa0020370:CDS |
| TAATGGAAATGGGAAAATCT+TGG | 0.395242 | 1_1:+35313111 | Msa0020370:CDS |
| TTATTCCCTGTGGCAACATA+AGG | 0.396444 | 1_1:-35314390 | None:intergenic |
| GGTGTATCTTTAATGGAAAT+GGG | 0.396933 | 1_1:+35313101 | Msa0020370:intron |
| GGCTTACTGTATAGATAAAA+AGG | 0.403335 | 1_1:-35312685 | None:intergenic |
| GTAGGGGCCCACTGTCATCT+TGG | 0.405310 | 1_1:+35314495 | Msa0020370:CDS |
| GATGCGACCTCCAGAGTATT+GGG | 0.405532 | 1_1:+35317148 | Msa0020370:CDS |
| TTGGAGCATTTGAGAAGCTT+GGG | 0.405741 | 1_1:+35312805 | Msa0020370:CDS |
| ATCTCAGCATTTGCTGGGGC+TGG | 0.408539 | 1_1:-35316456 | None:intergenic |
| AAATCTGCAGACTCACAAAC+AGG | 0.410971 | 1_1:-35316501 | None:intergenic |
| AATCTTGGAGGATTTGGTCT+TGG | 0.411340 | 1_1:+35313126 | Msa0020370:CDS |
| TCATTTGCAGGGTACTGGTC+TGG | 0.412975 | 1_1:+35317070 | Msa0020370:intron |
| TTACATTCTAAATTGTCAAT+TGG | 0.413892 | 1_1:-35317871 | None:intergenic |
| CGGTGCTTATTGTATGAGTA+TGG | 0.417512 | 1_1:+35317106 | Msa0020370:CDS |
| GACCACATGCGGTTGTTTGA+TGG | 0.417915 | 1_1:+35317612 | Msa0020370:CDS |
| GTGGCAGCTGCAAGAATTGC+TGG | 0.420657 | 1_1:+35313205 | Msa0020370:CDS |
| GTTGTAATCTCAGCATTTGC+TGG | 0.429365 | 1_1:-35316462 | None:intergenic |
| TTTAAGGATAACCTTGGTAA+TGG | 0.433092 | 1_1:-35314523 | None:intergenic |
| TATTGACGAAATTCGAGCTC+AGG | 0.433675 | 1_1:+35314819 | Msa0020370:CDS |
| ATATTTCAGGTTGAAGATGA+TGG | 0.441114 | 1_1:+35317552 | Msa0020370:intron |
| CTTAAACTCGCTCTTCGTGC+TGG | 0.445679 | 1_1:+35312859 | Msa0020370:CDS |
| TTTGGAGCATTTGAGAAGCT+TGG | 0.446081 | 1_1:+35312804 | Msa0020370:CDS |
| TCTGAGAACAAAAGGTTTGA+TGG | 0.449746 | 1_1:-35312527 | None:intergenic |
| ACGAGGGCTTTGTTTGACTT+TGG | 0.450949 | 1_1:+35312375 | Msa0020370:five_prime_UTR |
| TCTGCAGATTTCTTGGGAAA+AGG | 0.451066 | 1_1:+35316513 | Msa0020370:CDS |
| GTTGACAAACACGCCTGCTT+CGG | 0.459688 | 1_1:-35313152 | None:intergenic |
| TGTTTCAACAAATCCGAAGA+TGG | 0.460298 | 1_1:+35312604 | Msa0020370:CDS |
| GTCCATCCTTATGTTGCCAC+AGG | 0.463820 | 1_1:+35314384 | Msa0020370:CDS |
| TGCTTAGTTAGCCGGGTGAC+AGG | 0.464454 | 1_1:+35315333 | Msa0020370:CDS |
| CACCCGGCTAACTAAGCAAC+AGG | 0.470538 | 1_1:-35315328 | None:intergenic |
| ATTGTGTTGCTTATGTATGA+TGG | 0.471012 | 1_1:+35317824 | Msa0020370:three_prime_UTR |
| TGTGAGTCTGCAGATTTCTT+GGG | 0.472848 | 1_1:+35316507 | Msa0020370:CDS |
| ACACCTGTTGCTTAGTTAGC+CGG | 0.475968 | 1_1:+35315325 | Msa0020370:CDS |
| CAACAACAATAAACTGCACC+TGG | 0.476524 | 1_1:+35311649 | Msa0020370:five_prime_UTR |
| AGAACTGCTCTGAGAACAAA+AGG | 0.476863 | 1_1:-35312535 | None:intergenic |
| CTTCGGATTTGTTGAAACAA+TGG | 0.478563 | 1_1:-35312600 | None:intergenic |
| AGATGCGACCTCCAGAGTAT+TGG | 0.480794 | 1_1:+35317147 | Msa0020370:CDS |
| GAGACTTGGGCGGATAAGTT+CGG | 0.487978 | 1_1:-35315406 | None:intergenic |
| CATAGTACCTTGGCAGGAGT+TGG | 0.490280 | 1_1:-35316546 | None:intergenic |
| TTGTAATCTCAGCATTTGCT+GGG | 0.491786 | 1_1:-35316461 | None:intergenic |
| AATATAGTTGACCATAATAG+TGG | 0.493524 | 1_1:-35314800 | None:intergenic |
| CTGCAAGAATTGCTGGAAAG+AGG | 0.494994 | 1_1:+35313212 | Msa0020370:CDS |
| CATTTGAGAAGCTTGGGTTG+TGG | 0.497583 | 1_1:+35312811 | Msa0020370:CDS |
| TATACCTGCGGATCAACATC+AGG | 0.502240 | 1_1:-35313259 | None:intergenic |
| GCAAGCTGAACCAACCTTGT+GGG | 0.502499 | 1_1:-35312889 | None:intergenic |
| ACAGTATCAATTAGATCTCT+GGG | 0.502707 | 1_1:-35314919 | None:intergenic |
| AATGATGAGTTTAAGATCAC+GGG | 0.505697 | 1_1:-35315277 | None:intergenic |
| CACCTGTTGCTTAGTTAGCC+GGG | 0.507585 | 1_1:+35315326 | Msa0020370:CDS |
| GTTGTTATTTGCTTAATCAA+AGG | 0.507758 | 1_1:+35312003 | Msa0020370:five_prime_UTR |
| GAATGGAACAAGAGTGAGAG+AGG | 0.515700 | 1_1:-35312426 | None:intergenic |
| TTTGGTGAATGAGTGATTGA+AGG | 0.517249 | 1_1:-35312455 | None:intergenic |
| TGAATATCGGTGGTGGACTT+GGG | 0.519431 | 1_1:+35314860 | Msa0020370:CDS |
| ATACATCATAGTACCTTGGC+AGG | 0.520890 | 1_1:-35316552 | None:intergenic |
| TAATCCTGATGTTGATCCGC+AGG | 0.523562 | 1_1:+35313255 | Msa0020370:CDS |
| CTTAAACTCATCATTGAACC+AGG | 0.524301 | 1_1:+35315285 | Msa0020370:CDS |
| GCTAAACTGAAACTAGAAAG+AGG | 0.527006 | 1_1:-35317765 | None:intergenic |
| GATTATTTGAATATCGGTGG+TGG | 0.529387 | 1_1:+35314853 | Msa0020370:CDS |
| TGAAGCATATAAAGATGCAT+TGG | 0.530975 | 1_1:+35312726 | Msa0020370:CDS |
| GTTTCAACAAATCCGAAGAT+GGG | 0.531477 | 1_1:+35312605 | Msa0020370:CDS |
| ACTTGAAGGAAATTGAAGAA+AGG | 0.532615 | 1_1:-35311728 | None:intergenic |
| ACAGTGTAGATACCCATCTT+CGG | 0.534906 | 1_1:-35312617 | None:intergenic |
| ATTGACGAAATTCGAGCTCA+GGG | 0.537509 | 1_1:+35314820 | Msa0020370:CDS |
| AAGAATGGAAGATTTGAAGC+TGG | 0.538882 | 1_1:-35311961 | None:intergenic |
| CTGGTACATACCCAATACTC+TGG | 0.544316 | 1_1:-35317158 | None:intergenic |
| ACATGACAGACATTGCTTTG+CGG | 0.545373 | 1_1:-35311675 | None:intergenic |
| GACATTGCTTTGCGGGACCC+AGG | 0.545583 | 1_1:-35311667 | None:intergenic |
| TGCAAGAATTGCTGGAAAGA+GGG | 0.545638 | 1_1:+35313213 | Msa0020370:CDS |
| TGATAAGCATCATAGAGACT+TGG | 0.549432 | 1_1:-35315420 | None:intergenic |
| TGGAAATGGGAAAATCTTGG+AGG | 0.550107 | 1_1:+35313114 | Msa0020370:CDS |
| CAATGATGAGTTTAAGATCA+CGG | 0.550410 | 1_1:-35315278 | None:intergenic |
| GCATATAAAGATGCATTGGA+AGG | 0.560306 | 1_1:+35312730 | Msa0020370:CDS |
| TTGGTTTCCATCACCATGGT+AGG | 0.561645 | 1_1:+35312394 | Msa0020370:exon |
| TTAGATCTCTGGGTTTAGGA+AGG | 0.566951 | 1_1:-35314909 | None:intergenic |
| GGTCTGGTTGTTCATGATGC+CGG | 0.567676 | 1_1:+35317086 | Msa0020370:CDS |
| TTGAACTGATAACTTATCTG+AGG | 0.568259 | 1_1:+35317638 | Msa0020370:exon |
| GACTTTGGTTTCCATCACCA+TGG | 0.570865 | 1_1:+35312390 | Msa0020370:exon |
| CAGATAAGTTATCAGTTCAA+AGG | 0.571098 | 1_1:-35317635 | None:intergenic |
| TCAACGTTTCTAGTAATCTG+TGG | 0.572578 | 1_1:-35312706 | None:intergenic |
| GGGATCGATTATTATCATGC+CGG | 0.581743 | 1_1:+35314880 | Msa0020370:CDS |
| GTGTGTGCCTACCATGGTGA+TGG | 0.585533 | 1_1:-35312401 | None:intergenic |
| TGGAACAAGAGTGAGAGAGG+AGG | 0.586623 | 1_1:-35312423 | None:intergenic |
| GATAAGCATCATAGAGACTT+GGG | 0.588452 | 1_1:-35315419 | None:intergenic |
| GGCCATCAAACAACCGCATG+TGG | 0.590295 | 1_1:-35317614 | None:intergenic |
| GTGACAGGTGTCAAAACCAA+TGG | 0.593225 | 1_1:+35315348 | Msa0020370:CDS |
| TTTGCTATAAGTGATCTCCC+TGG | 0.595091 | 1_1:-35315303 | None:intergenic |
| CACTGAGCAAAATCAGACAC+GGG | 0.595236 | 1_1:+35317577 | Msa0020370:CDS |
| GTGCTGGATTTGATCCCACA+AGG | 0.598718 | 1_1:+35312875 | Msa0020370:CDS |
| GAGAACAAAAGGTTTGATGG+TGG | 0.603128 | 1_1:-35312524 | None:intergenic |
| TCCCTGTGGCAACATAAGGA+TGG | 0.603229 | 1_1:-35314386 | None:intergenic |
| AAATATCACATTCTTGAGCA+AGG | 0.605301 | 1_1:-35317695 | None:intergenic |
| TCTACACTGTGAAGGTCGCA+AGG | 0.611781 | 1_1:+35312630 | Msa0020370:CDS |
| GGGTTTAGGAAGGACAGCAC+CGG | 0.612449 | 1_1:-35314899 | None:intergenic |
| TTAGAAATGAGAAGCTGCAG+TGG | 0.616652 | 1_1:+35314430 | Msa0020370:CDS |
| GTTGATTATTTGAATATCGG+TGG | 0.616729 | 1_1:+35314850 | Msa0020370:CDS |
| TCACATTCTTGAGCAAGGAA+AGG | 0.622246 | 1_1:-35317690 | None:intergenic |
| CATATAAAGATGCATTGGAA+GGG | 0.626626 | 1_1:+35312731 | Msa0020370:CDS |
| GGTTGATCCAAGATGACAGT+GGG | 0.631080 | 1_1:-35314502 | None:intergenic |
| AGAACTTCCAACTCCTGCCA+AGG | 0.636769 | 1_1:+35316539 | Msa0020370:CDS |
| TTTAGAGTTCTTATTCCCTG+TGG | 0.638479 | 1_1:-35314400 | None:intergenic |
| CTACAAGCTTTAGCTCAACA+GGG | 0.648489 | 1_1:-35314476 | None:intergenic |
| TCCATCCTTATGTTGCCACA+GGG | 0.649172 | 1_1:+35314385 | Msa0020370:CDS |
| CATACTCATACAATAAGCAC+CGG | 0.650287 | 1_1:-35317105 | None:intergenic |
| TCACTGAGCAAAATCAGACA+CGG | 0.653042 | 1_1:+35317576 | Msa0020370:CDS |
| GATGGGTATCTACACTGTGA+AGG | 0.653835 | 1_1:+35312622 | Msa0020370:CDS |
| TTTGTGCAGCAGAGAAACAG+GGG | 0.656083 | 1_1:-35312293 | None:intergenic |
| AATCTGCAGACTCACAAACA+GGG | 0.656316 | 1_1:-35316500 | None:intergenic |
| TCTTGGATCAACCATTACCA+AGG | 0.656897 | 1_1:+35314512 | Msa0020370:CDS |
| ACAAAACAATCATAAAACGA+GGG | 0.669738 | 1_1:+35312359 | Msa0020370:five_prime_UTR |
| TGTAATCTCAGCATTTGCTG+GGG | 0.672495 | 1_1:-35316460 | None:intergenic |
| GTACATACCCAATACTCTGG+AGG | 0.674644 | 1_1:-35317155 | None:intergenic |
| GTTTGATTTGGAAAACATTG+TGG | 0.675214 | 1_1:+35313186 | Msa0020370:CDS |
| AACAAAACAATCATAAAACG+AGG | 0.676160 | 1_1:+35312358 | Msa0020370:five_prime_UTR |
| AACAACAATAAACTGCACCT+GGG | 0.677627 | 1_1:+35311650 | Msa0020370:five_prime_UTR |
| GAGGAGGTGTGTGCCTACCA+TGG | 0.690234 | 1_1:-35312407 | None:intergenic |
| TGTTGAGCTAAAGCTTGTAG+GGG | 0.694178 | 1_1:+35314479 | Msa0020370:CDS |
| TTAAACTCATCATTGAACCA+GGG | 0.698774 | 1_1:+35315286 | Msa0020370:CDS |
| AGACATTCGAAGACCACATG+CGG | 0.704722 | 1_1:+35317601 | Msa0020370:CDS |
| AAGCATCATAGAGACTTGGG+CGG | 0.714237 | 1_1:-35315416 | None:intergenic |
| ACACTGTGAAGGTCGCAAGG+TGG | 0.722931 | 1_1:+35312633 | Msa0020370:CDS |
| TGGTTGATCCAAGATGACAG+TGG | 0.759149 | 1_1:-35314503 | None:intergenic |
| ACTGAGCAAAATCAGACACG+GGG | 0.760085 | 1_1:+35317578 | Msa0020370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAATAATTAAAAAGA+AGG | - | chr1_1:35311866-35311885 | None:intergenic | 10.0% |
| !!! | TAATAATAATTACAAGATTT+TGG | + | chr1_1:35312786-35312805 | Msa0020370:CDS | 10.0% |
| !! | GATGTTTAATAATGAAATTA+AGG | + | chr1_1:35312125-35312144 | Msa0020370:intron | 15.0% |
| !!! | TATAAATGCAATTTTTGAAA+CGG | + | chr1_1:35312150-35312169 | Msa0020370:intron | 15.0% |
| !!! | TGTTTTGTTTATGTTTTTTT+TGG | - | chr1_1:35312347-35312366 | None:intergenic | 15.0% |
| !! | AAAAAAATAATCAATTAGCA+GGG | - | chr1_1:35315225-35315244 | None:intergenic | 15.0% |
| !! | TAAAAAAATAATCAATTAGC+AGG | - | chr1_1:35315226-35315245 | None:intergenic | 15.0% |
| !!! | GCTAATTGATTATTTTTTTA+CGG | + | chr1_1:35315226-35315245 | Msa0020370:intron | 15.0% |
| !!! | CTCAATGTTTTAATATTTTA+TGG | + | chr1_1:35315586-35315605 | Msa0020370:intron | 15.0% |
| !!! | CTTTTTCAATGAATATTTTA+TGG | + | chr1_1:35316200-35316219 | Msa0020370:intron | 15.0% |
| !!! | TTTTCATGCATGTTTTTTTT+AGG | + | chr1_1:35312069-35312088 | Msa0020370:intron | 20.0% |
| !!! | TTTCATGCATGTTTTTTTTA+GGG | + | chr1_1:35312070-35312089 | Msa0020370:intron | 20.0% |
| !!! | TATTATTGGTTATGCTATTA+AGG | + | chr1_1:35312762-35312781 | Msa0020370:CDS | 20.0% |
| !! | TTTACTTGATTATATCAAAC+TGG | + | chr1_1:35312938-35312957 | Msa0020370:intron | 20.0% |
| !!! | AATTGGTTTGTTTAATTGAT+TGG | + | chr1_1:35312997-35313016 | Msa0020370:intron | 20.0% |
| !! | TGATTTATTTATGAGATTCT+TGG | + | chr1_1:35313043-35313062 | Msa0020370:intron | 20.0% |
| !! | TTAAACATTTATTTGTCCTA+TGG | - | chr1_1:35313443-35313462 | None:intergenic | 20.0% |
| !! | AAAAATCTTCAATTTCTTCT+AGG | - | chr1_1:35313528-35313547 | None:intergenic | 20.0% |
| !!! | ATATTTCTCTTGGTTATTTT+TGG | + | chr1_1:35313582-35313601 | Msa0020370:intron | 20.0% |
| !! | AAATTTATCTCAAAAGAAGT+GGG | - | chr1_1:35313953-35313972 | None:intergenic | 20.0% |
| !! | AAAATTTATCTCAAAAGAAG+TGG | - | chr1_1:35313954-35313973 | None:intergenic | 20.0% |
| !!! | TTGCTTGTGAATTATTTTTT+AGG | - | chr1_1:35314113-35314132 | None:intergenic | 20.0% |
| !!! | AATGATCTTATTTATTCCTA+TGG | + | chr1_1:35314131-35314150 | Msa0020370:intron | 20.0% |
| !! | TCAATTTCATCAATTACATT+GGG | + | chr1_1:35314198-35314217 | Msa0020370:intron | 20.0% |
| !! | TATTGTGCATTTATTACTTT+AGG | + | chr1_1:35314621-35314640 | Msa0020370:intron | 20.0% |
| !!! | GAAGTTGATTATTTGAATAT+CGG | + | chr1_1:35314847-35314866 | Msa0020370:CDS | 20.0% |
| !!! | ACAAATTTAATTGTTCTGAA+GGG | - | chr1_1:35315109-35315128 | None:intergenic | 20.0% |
| !! | TACAAATTTAATTGTTCTGA+AGG | - | chr1_1:35315110-35315129 | None:intergenic | 20.0% |
| !!! | ATTGATTATTTTTTTACGGT+TGG | + | chr1_1:35315230-35315249 | Msa0020370:intron | 20.0% |
| !!! | TTAATATTTTATGGTTTCGT+TGG | + | chr1_1:35315595-35315614 | Msa0020370:intron | 20.0% |
| !!! | TAATATTTTATGGTTTCGTT+GGG | + | chr1_1:35315596-35315615 | Msa0020370:intron | 20.0% |
| !!! | TTATTGATGATTTATGATTG+AGG | + | chr1_1:35315689-35315708 | Msa0020370:intron | 20.0% |
| !!! | TCAATGAATATTTTATGGTT+TGG | + | chr1_1:35316205-35316224 | Msa0020370:intron | 20.0% |
| !! | TTAGAATCAAGTAACTAAAA+TGG | - | chr1_1:35316343-35316362 | None:intergenic | 20.0% |
| !! | AATAGTTGCACAAATAATAT+AGG | + | chr1_1:35316589-35316608 | Msa0020370:intron | 20.0% |
| !!! | CAAAATGATTCCTTTTAAAA+TGG | - | chr1_1:35317276-35317295 | None:intergenic | 20.0% |
| !!! | AATAATGTTTTTTCAAGCAA+AGG | - | chr1_1:35317453-35317472 | None:intergenic | 20.0% |
| !! | AAAGAAAAGACAAATATAGA+TGG | - | chr1_1:35317482-35317501 | None:intergenic | 20.0% |
| !! | GATTTCTTGTATAATATTTC+AGG | + | chr1_1:35317539-35317558 | Msa0020370:intron | 20.0% |
| !! | TTACATTCTAAATTGTCAAT+TGG | - | chr1_1:35317874-35317893 | None:intergenic | 20.0% |
| !!! | ATGTAAGCTCATTTTTAATA+AGG | + | chr1_1:35317888-35317907 | Msa0020370:three_prime_UTR | 20.0% |
| ! | TAGTGAAAGTTATTACTTGA+AGG | - | chr1_1:35311745-35311764 | None:intergenic | 25.0% |
| ! | TGCAGAAAAAATGTTAAGAA+TGG | - | chr1_1:35311979-35311998 | None:intergenic | 25.0% |
| !!! | GTTGTTATTTGCTTAATCAA+AGG | + | chr1_1:35312003-35312022 | Msa0020370:five_prime_UTR | 25.0% |
| !!! | TTCATGCATGTTTTTTTTAG+GGG | + | chr1_1:35312071-35312090 | Msa0020370:intron | 25.0% |
| !!! | TTTGGTTGTTTTGTTGAAAA+GGG | - | chr1_1:35312329-35312348 | None:intergenic | 25.0% |
| !!! | TTTTGGTTGTTTTGTTGAAA+AGG | - | chr1_1:35312330-35312349 | None:intergenic | 25.0% |
| ! | AACAAAACAATCATAAAACG+AGG | + | chr1_1:35312358-35312377 | Msa0020370:five_prime_UTR | 25.0% |
| ! | ACAAAACAATCATAAAACGA+GGG | + | chr1_1:35312359-35312378 | Msa0020370:five_prime_UTR | 25.0% |
| !!! | GTCAAAATTAGTTCTTTTTG+TGG | - | chr1_1:35312581-35312600 | None:intergenic | 25.0% |
| !!! | TGTTTGTGTTAGTTTTTCAA+TGG | + | chr1_1:35312974-35312993 | Msa0020370:intron | 25.0% |
| !!! | TGTTAGTTTTTCAATGGAAT+TGG | + | chr1_1:35312980-35312999 | Msa0020370:intron | 25.0% |
| ! | TTGTTTAATTGATTGGAGTT+TGG | + | chr1_1:35313004-35313023 | Msa0020370:intron | 25.0% |
| !! | ACTGTATTGTATTAATGGAT+AGG | + | chr1_1:35313080-35313099 | Msa0020370:intron | 25.0% |
| !!! | TATTCCATATTTTAGCTACT+AGG | + | chr1_1:35313475-35313494 | Msa0020370:intron | 25.0% |
| ! | TATGTTTCACATATTTCTCT+TGG | + | chr1_1:35313572-35313591 | Msa0020370:intron | 25.0% |
| !!! | CTTGGTTATTTTTGGAAAAT+TGG | + | chr1_1:35313590-35313609 | Msa0020370:intron | 25.0% |
| ! | AATTTATCTCAAAAGAAGTG+GGG | - | chr1_1:35313952-35313971 | None:intergenic | 25.0% |
| !! | TTGAGATAAATTTTGTACGT+AGG | + | chr1_1:35313960-35313979 | Msa0020370:intron | 25.0% |
| !!! | TGTGAATTATTTTTTAGGCA+AGG | - | chr1_1:35314108-35314127 | None:intergenic | 25.0% |
| ! | CAATGTAATTGATGAAATTG+AGG | - | chr1_1:35314199-35314218 | None:intergenic | 25.0% |
| ! | CTCAATTTCATCAATTACAT+TGG | + | chr1_1:35314197-35314216 | Msa0020370:intron | 25.0% |
| !! | AGAGAAAAAGTTTTTGATGA+AGG | - | chr1_1:35314248-35314267 | None:intergenic | 25.0% |
| ! | ATAAACCAAAACATAAACCA+TGG | - | chr1_1:35314318-35314337 | None:intergenic | 25.0% |
| !! | TTTTTATCTTTGTCATCCTT+AGG | + | chr1_1:35314362-35314381 | Msa0020370:intron | 25.0% |
| !! | CAGAAAAGTAAAGACTTTTA+AGG | - | chr1_1:35314542-35314561 | None:intergenic | 25.0% |
| !!! | TCATAATATAAGTGCTGAAA+TGG | + | chr1_1:35314739-35314758 | Msa0020370:intron | 25.0% |
| ! | AATATAGTTGACCATAATAG+TGG | - | chr1_1:35314803-35314822 | None:intergenic | 25.0% |
| ! | TGTGATTAAGTTTGTAATTC+TGG | + | chr1_1:35314982-35315001 | Msa0020370:intron | 25.0% |
| !!! | AATGAAGTTTTTAGAACCAT+TGG | - | chr1_1:35315367-35315386 | None:intergenic | 25.0% |
| ! | AAAAACTTCATTGTGATTGA+TGG | + | chr1_1:35315375-35315394 | Msa0020370:CDS | 25.0% |
| !!! | GTCATTTTAAAGTGTGTATA+AGG | + | chr1_1:35315480-35315499 | Msa0020370:intron | 25.0% |
| !!! | CTGTTTTATTCTTTTTTCTC+TGG | - | chr1_1:35315649-35315668 | None:intergenic | 25.0% |
| ! | TGTTAATTGTAAGAATGAGT+AGG | - | chr1_1:35315791-35315810 | None:intergenic | 25.0% |
| !!! | TGAATATTTTATGGTTTGGT+TGG | + | chr1_1:35316209-35316228 | Msa0020370:intron | 25.0% |
| !!! | GAATATTTTATGGTTTGGTT+GGG | + | chr1_1:35316210-35316229 | Msa0020370:intron | 25.0% |
| ! | ATGTTGTGTTAACATTAACT+GGG | - | chr1_1:35316254-35316273 | None:intergenic | 25.0% |
| !! | ATTACAACTTTTGATGTAGT+CGG | + | chr1_1:35316477-35316496 | Msa0020370:CDS | 25.0% |
| !! | TAATTTGAGTTTCATTTGCA+GGG | + | chr1_1:35317059-35317078 | Msa0020370:intron | 25.0% |
| !! | TTTAGCAGAACCATTTTAAA+AGG | + | chr1_1:35317263-35317282 | Msa0020370:intron | 25.0% |
| !!! | ATTAGCTTTTTTGTTTGCAA+TGG | + | chr1_1:35317411-35317430 | Msa0020370:intron | 25.0% |
| !! | CAAGAAATCATTCTTTAAGA+CGG | - | chr1_1:35317528-35317547 | None:intergenic | 25.0% |
| !!! | CTTGAGATTTGTTGTATTTT+GGG | + | chr1_1:35317661-35317680 | Msa0020370:three_prime_UTR | 25.0% |
| ACTTGAAGGAAATTGAAGAA+AGG | - | chr1_1:35311731-35311750 | None:intergenic | 30.0% | |
| ! | GTAATCTGCATTTTGCATAT+TGG | + | chr1_1:35311789-35311808 | Msa0020370:intron | 30.0% |
| !! | CTCTAGTTTAATGCTATTTC+TGG | + | chr1_1:35311911-35311930 | Msa0020370:intron | 30.0% |
| ! | AATGAGTGATTGAAGGTTTT+GGG | - | chr1_1:35312451-35312470 | None:intergenic | 30.0% |
| !! | TTAGTTCTTTTTGTGGTTTC+TGG | - | chr1_1:35312574-35312593 | None:intergenic | 30.0% |
| GGCTTACTGTATAGATAAAA+AGG | - | chr1_1:35312688-35312707 | None:intergenic | 30.0% | |
| TGAAGCATATAAAGATGCAT+TGG | + | chr1_1:35312726-35312745 | Msa0020370:CDS | 30.0% | |
| CATATAAAGATGCATTGGAA+GGG | + | chr1_1:35312731-35312750 | Msa0020370:CDS | 30.0% | |
| GAAGGGTTAACATCTATTAT+TGG | + | chr1_1:35312748-35312767 | Msa0020370:CDS | 30.0% | |
| CTTGATTATATCAAACTGGT+TGG | + | chr1_1:35312942-35312961 | Msa0020370:intron | 30.0% | |
| !! | TGAGATTCTTGGTGTATTTT+TGG | + | chr1_1:35313054-35313073 | Msa0020370:intron | 30.0% |
| !! | GAGATTCTTGGTGTATTTTT+GGG | + | chr1_1:35313055-35313074 | Msa0020370:intron | 30.0% |
| ATGGATAGGTGTATCTTTAA+TGG | + | chr1_1:35313094-35313113 | Msa0020370:intron | 30.0% | |
| AGGTGTATCTTTAATGGAAA+TGG | + | chr1_1:35313100-35313119 | Msa0020370:intron | 30.0% | |
| GGTGTATCTTTAATGGAAAT+GGG | + | chr1_1:35313101-35313120 | Msa0020370:intron | 30.0% | |
| TAATGGAAATGGGAAAATCT+TGG | + | chr1_1:35313111-35313130 | Msa0020370:CDS | 30.0% | |
| !! | GTTTGATTTGGAAAACATTG+TGG | + | chr1_1:35313186-35313205 | Msa0020370:CDS | 30.0% |
| ACTAAGAATCAATATACCTG+CGG | - | chr1_1:35313274-35313293 | None:intergenic | 30.0% | |
| CAATCCTAGTAGCTAAAATA+TGG | - | chr1_1:35313482-35313501 | None:intergenic | 30.0% | |
| CATAGCTTAGATGAATATCA+TGG | - | chr1_1:35313556-35313575 | None:intergenic | 30.0% | |
| !!! | TATTTTTGGAAAATTGGCTC+CGG | + | chr1_1:35313596-35313615 | Msa0020370:intron | 30.0% |
| TAATAAAATCTGCATCACTG+TGG | - | chr1_1:35313784-35313803 | None:intergenic | 30.0% | |
| ATTCAGAAATCATAGTGCAA+GGG | - | chr1_1:35313889-35313908 | None:intergenic | 30.0% | |
| AATTCAGAAATCATAGTGCA+AGG | - | chr1_1:35313890-35313909 | None:intergenic | 30.0% | |
| TGCACTATGATTTCTGAATT+TGG | + | chr1_1:35313890-35313909 | Msa0020370:intron | 30.0% | |
| ATTTATCTCAAAAGAAGTGG+GGG | - | chr1_1:35313951-35313970 | None:intergenic | 30.0% | |
| ! | ATTTTTATGTTGCTCCTACT+TGG | + | chr1_1:35314044-35314063 | Msa0020370:intron | 30.0% |
| ! | TTTTTATGTTGCTCCTACTT+GGG | + | chr1_1:35314045-35314064 | Msa0020370:intron | 30.0% |
| ATTAAAAGTTCAACCCAAGT+AGG | - | chr1_1:35314061-35314080 | None:intergenic | 30.0% | |
| GAAACGTTATTGCATTTCTT+CGG | - | chr1_1:35314086-35314105 | None:intergenic | 30.0% | |
| !! | ATTGATTGCTTTGAGATGTA+TGG | + | chr1_1:35314275-35314294 | Msa0020370:intron | 30.0% |
| GGGAATAAGAACTCTAAATT+TGG | + | chr1_1:35314405-35314424 | Msa0020370:CDS | 30.0% | |
| TTTAAGGATAACCTTGGTAA+TGG | - | chr1_1:35314526-35314545 | None:intergenic | 30.0% | |
| !! | AAGACTTTTAAGGATAACCT+TGG | - | chr1_1:35314532-35314551 | None:intergenic | 30.0% |
| TGATCCATTTATATGCTGAT+AGG | + | chr1_1:35314678-35314697 | Msa0020370:intron | 30.0% | |
| GATCCATTTATATGCTGATA+GGG | + | chr1_1:35314679-35314698 | Msa0020370:intron | 30.0% | |
| AAAATATCTACCTGGAAAGA+GGG | - | chr1_1:35314769-35314788 | None:intergenic | 30.0% | |
| ! | TTTCCAGGTAGATATTTTCA+GGG | + | chr1_1:35314771-35314790 | Msa0020370:intron | 30.0% |
| GTTGATTATTTGAATATCGG+TGG | + | chr1_1:35314850-35314869 | Msa0020370:CDS | 30.0% | |
| ACAGTATCAATTAGATCTCT+GGG | - | chr1_1:35314922-35314941 | None:intergenic | 30.0% | |
| GTAATTCTGGTACAAGAATA+AGG | + | chr1_1:35314995-35315014 | Msa0020370:intron | 30.0% | |
| TAAGGAATACCACTGATAAA+TGG | + | chr1_1:35315013-35315032 | Msa0020370:intron | 30.0% | |
| AAGGAATACCACTGATAAAT+GGG | + | chr1_1:35315014-35315033 | Msa0020370:intron | 30.0% | |
| TAAGAATTCCCATTTATCAG+TGG | - | chr1_1:35315025-35315044 | None:intergenic | 30.0% | |
| !!! | TATTTTTTTACGGTTGGAGT+AGG | + | chr1_1:35315236-35315255 | Msa0020370:intron | 30.0% |
| ! | AATGATGAGTTTAAGATCAC+GGG | - | chr1_1:35315280-35315299 | None:intergenic | 30.0% |
| ! | CAATGATGAGTTTAAGATCA+CGG | - | chr1_1:35315281-35315300 | None:intergenic | 30.0% |
| TTAAACTCATCATTGAACCA+GGG | + | chr1_1:35315286-35315305 | Msa0020370:CDS | 30.0% | |
| AGTGTGTATAAGGATTATGA+TGG | + | chr1_1:35315490-35315509 | Msa0020370:intron | 30.0% | |
| !! | ATTATGATGGATTCCTATGA+AGG | + | chr1_1:35315503-35315522 | Msa0020370:intron | 30.0% |
| TTGAGGAAAATTACAGAGTT+AGG | + | chr1_1:35315706-35315725 | Msa0020370:intron | 30.0% | |
| TGAGGAAAATTACAGAGTTA+GGG | + | chr1_1:35315707-35315726 | Msa0020370:intron | 30.0% | |
| TTACACTTGCACTATTTAAG+GGG | - | chr1_1:35315847-35315866 | None:intergenic | 30.0% | |
| CTTACACTTGCACTATTTAA+GGG | - | chr1_1:35315848-35315867 | None:intergenic | 30.0% | |
| ACTTACACTTGCACTATTTA+AGG | - | chr1_1:35315849-35315868 | None:intergenic | 30.0% | |
| ! | TTATTCTAGAAGGGGTAAAA+AGG | - | chr1_1:35315925-35315944 | None:intergenic | 30.0% |
| ATTCGTTATCAGCATTTGTT+AGG | - | chr1_1:35316022-35316041 | None:intergenic | 30.0% | |
| TTGCTTTGTAAAGAAGTTGT+TGG | + | chr1_1:35316084-35316103 | Msa0020370:intron | 30.0% | |
| TTAACTGGGTTCACTTTAAT+TGG | - | chr1_1:35316240-35316259 | None:intergenic | 30.0% | |
| GATGTTGTGTTAACATTAAC+TGG | - | chr1_1:35316255-35316274 | None:intergenic | 30.0% | |
| ATTGCATTGTAAGAAGTTGT+TGG | + | chr1_1:35316298-35316317 | Msa0020370:intron | 30.0% | |
| ! | TTTTATGCAGCATATAGAAC+TGG | + | chr1_1:35316428-35316447 | Msa0020370:intron | 30.0% |
| ATCAATACATCATAGTACCT+TGG | - | chr1_1:35316559-35316578 | None:intergenic | 30.0% | |
| ! | ATGTCAGTGTTGTTAAATAG+CGG | + | chr1_1:35316640-35316659 | Msa0020370:intron | 30.0% |
| TTGTCAAATAGCAACTCTAA+TGG | + | chr1_1:35316734-35316753 | Msa0020370:intron | 30.0% | |
| AATTCAACGTTGTCAAATAG+CGG | + | chr1_1:35316834-35316853 | Msa0020370:intron | 30.0% | |
| TTCTCAACATTGGATAATGA+TGG | + | chr1_1:35317003-35317022 | Msa0020370:intron | 30.0% | |
| ! | CAACATCACAAACTTGTTTA+AGG | + | chr1_1:35317026-35317045 | Msa0020370:intron | 30.0% |
| ! | CTAATTTGAGTTTCATTTGC+AGG | + | chr1_1:35317058-35317077 | Msa0020370:intron | 30.0% |
| ! | GCTTTTCTAAATCTCTTCTT+AGG | + | chr1_1:35317299-35317318 | Msa0020370:intron | 30.0% |
| ! | TTTAAGACGGCAAATATTGA+TGG | - | chr1_1:35317515-35317534 | None:intergenic | 30.0% |
| !! | ATATTTCAGGTTGAAGATGA+TGG | + | chr1_1:35317552-35317571 | Msa0020370:intron | 30.0% |
| CAGATAAGTTATCAGTTCAA+AGG | - | chr1_1:35317638-35317657 | None:intergenic | 30.0% | |
| TTGAACTGATAACTTATCTG+AGG | + | chr1_1:35317638-35317657 | Msa0020370:exon | 30.0% | |
| !!! | GCTTGAGATTTGTTGTATTT+TGG | + | chr1_1:35317660-35317679 | Msa0020370:three_prime_UTR | 30.0% |
| !!! | GATTTGTTGTATTTTGGGTT+TGG | + | chr1_1:35317666-35317685 | Msa0020370:three_prime_UTR | 30.0% |
| AAATATCACATTCTTGAGCA+AGG | - | chr1_1:35317698-35317717 | None:intergenic | 30.0% | |
| ! | TGCTCAAGAATGTGATATTT+TGG | + | chr1_1:35317698-35317717 | Msa0020370:three_prime_UTR | 30.0% |
| !! | ATTGTGTTGCTTATGTATGA+TGG | + | chr1_1:35317824-35317843 | Msa0020370:three_prime_UTR | 30.0% |
| AACAACAATAAACTGCACCT+GGG | + | chr1_1:35311650-35311669 | Msa0020370:five_prime_UTR | 35.0% | |
| CGTGAAAGAGAATAGAATTC+AGG | - | chr1_1:35311706-35311725 | None:intergenic | 35.0% | |
| ! | AAGAATGGAAGATTTGAAGC+TGG | - | chr1_1:35311964-35311983 | None:intergenic | 35.0% |
| AAACCAGCCAAGAAACAAAA+AGG | + | chr1_1:35312241-35312260 | Msa0020370:intron | 35.0% | |
| AACCAGCCAAGAAACAAAAA+GGG | + | chr1_1:35312242-35312261 | Msa0020370:intron | 35.0% | |
| GAGACAGATTAAAAAGCCAT+GGG | - | chr1_1:35312274-35312293 | None:intergenic | 35.0% | |
| ! | GAATGAGTGATTGAAGGTTT+TGG | - | chr1_1:35312452-35312471 | None:intergenic | 35.0% |
| TTTGGTGAATGAGTGATTGA+AGG | - | chr1_1:35312458-35312477 | None:intergenic | 35.0% | |
| !! | AAAAGGTTTGATGGTGGATT+TGG | - | chr1_1:35312521-35312540 | None:intergenic | 35.0% |
| TCTGAGAACAAAAGGTTTGA+TGG | - | chr1_1:35312530-35312549 | None:intergenic | 35.0% | |
| !!! | TTCTTTTTGTGGTTTCTGGT+GGG | - | chr1_1:35312570-35312589 | None:intergenic | 35.0% |
| !! | CTTCGGATTTGTTGAAACAA+TGG | - | chr1_1:35312603-35312622 | None:intergenic | 35.0% |
| TGTTTCAACAAATCCGAAGA+TGG | + | chr1_1:35312604-35312623 | Msa0020370:CDS | 35.0% | |
| GTTTCAACAAATCCGAAGAT+GGG | + | chr1_1:35312605-35312624 | Msa0020370:CDS | 35.0% | |
| !! | TCAACGTTTCTAGTAATCTG+TGG | - | chr1_1:35312709-35312728 | None:intergenic | 35.0% |
| GCATATAAAGATGCATTGGA+AGG | + | chr1_1:35312730-35312749 | Msa0020370:CDS | 35.0% | |
| GGGTCACTGTATTGTATTAA+TGG | + | chr1_1:35313075-35313094 | Msa0020370:intron | 35.0% | |
| CATTGACAGTGAGTTTGATT+TGG | + | chr1_1:35313174-35313193 | Msa0020370:CDS | 35.0% | |
| AGTTTGATGCATACATCTTG+TGG | + | chr1_1:35313312-35313331 | Msa0020370:intron | 35.0% | |
| TTTAGCTACTAGGATTGATG+AGG | + | chr1_1:35313485-35313504 | Msa0020370:intron | 35.0% | |
| AAATTCCATTAGTGCTTGGA+GGG | + | chr1_1:35313619-35313638 | Msa0020370:intron | 35.0% | |
| ! | CATAAGATGCTCCATTTTGA+AGG | - | chr1_1:35313696-35313715 | None:intergenic | 35.0% |
| ! | CTTCAAAATGGAGCATCTTA+TGG | + | chr1_1:35313694-35313713 | Msa0020370:intron | 35.0% |
| !! | TTGACCTGATTTTGAAGACT+TGG | + | chr1_1:35313729-35313748 | Msa0020370:intron | 35.0% |
| ATGTGCGCTAGTATGTAAAT+AGG | - | chr1_1:35314023-35314042 | None:intergenic | 35.0% | |
| CTCTGCAGAATAAATACCAT+AGG | - | chr1_1:35314150-35314169 | None:intergenic | 35.0% | |
| ATGGTATTTATTCTGCAGAG+TGG | + | chr1_1:35314150-35314169 | Msa0020370:intron | 35.0% | |
| TGGTATTTATTCTGCAGAGT+GGG | + | chr1_1:35314151-35314170 | Msa0020370:intron | 35.0% | |
| ATTTCTAACTCTCATTGCCA+TGG | + | chr1_1:35314298-35314317 | Msa0020370:intron | 35.0% | |
| ! | CATTGCCATGGTTTATGTTT+TGG | + | chr1_1:35314310-35314329 | Msa0020370:intron | 35.0% |
| ! | TTTAGAGTTCTTATTCCCTG+TGG | - | chr1_1:35314403-35314422 | None:intergenic | 35.0% |
| ATCTTGTGCGTTATCACTTT+GGG | + | chr1_1:35314566-35314585 | Msa0020370:intron | 35.0% | |
| AGACCCTATCAGCATATAAA+TGG | - | chr1_1:35314685-35314704 | None:intergenic | 35.0% | |
| AAATATCTACCTGGAAAGAG+GGG | - | chr1_1:35314768-35314787 | None:intergenic | 35.0% | |
| GAAAATATCTACCTGGAAAG+AGG | - | chr1_1:35314770-35314789 | None:intergenic | 35.0% | |
| ! | CTTTCCAGGTAGATATTTTC+AGG | + | chr1_1:35314770-35314789 | Msa0020370:intron | 35.0% |
| GATTATTTGAATATCGGTGG+TGG | + | chr1_1:35314853-35314872 | Msa0020370:CDS | 35.0% | |
| TCAATTAGATCTCTGGGTTT+AGG | - | chr1_1:35314916-35314935 | None:intergenic | 35.0% | |
| CACAGTATCAATTAGATCTC+TGG | - | chr1_1:35314923-35314942 | None:intergenic | 35.0% | |
| GAGATCTAATTGATACTGTG+AGG | + | chr1_1:35314923-35314942 | Msa0020370:intron | 35.0% | |
| TGCATGTCACAGTTACAAAA+TGG | - | chr1_1:35315067-35315086 | None:intergenic | 35.0% | |
| ! | ATTTTGTAACTGTGACATGC+AGG | + | chr1_1:35315066-35315085 | Msa0020370:intron | 35.0% |
| ! | TTTTGTAACTGTGACATGCA+GGG | + | chr1_1:35315067-35315086 | Msa0020370:intron | 35.0% |
| CTTAAACTCATCATTGAACC+AGG | + | chr1_1:35315285-35315304 | Msa0020370:CDS | 35.0% | |
| CATTGTGATTGATGGAAGTA+TGG | + | chr1_1:35315383-35315402 | Msa0020370:CDS | 35.0% | |
| GATAAGCATCATAGAGACTT+GGG | - | chr1_1:35315422-35315441 | None:intergenic | 35.0% | |
| TGATAAGCATCATAGAGACT+TGG | - | chr1_1:35315423-35315442 | None:intergenic | 35.0% | |
| AAGTCTCTATGATGCTTATC+AGG | + | chr1_1:35315422-35315441 | Msa0020370:CDS | 35.0% | |
| ACAAGACAAAAGAGACTAAG+AGG | - | chr1_1:35315462-35315481 | None:intergenic | 35.0% | |
| ! | AAGTGTCTAGAATCCTTCAT+AGG | - | chr1_1:35315519-35315538 | None:intergenic | 35.0% |
| GAGGAAAATTACAGAGTTAG+GGG | + | chr1_1:35315708-35315727 | Msa0020370:intron | 35.0% | |
| AATTACAGAGTTAGGGGAAA+TGG | + | chr1_1:35315714-35315733 | Msa0020370:intron | 35.0% | |
| ATTACAGAGTTAGGGGAAAT+GGG | + | chr1_1:35315715-35315734 | Msa0020370:intron | 35.0% | |
| ! | ACTATTTAAGGGGTGTGAAT+GGG | - | chr1_1:35315837-35315856 | None:intergenic | 35.0% |
| GCAATCATTGATCCATCATA+AGG | - | chr1_1:35315973-35315992 | None:intergenic | 35.0% | |
| ! | TTATCAGCATTTGTTAGGAC+TGG | - | chr1_1:35316017-35316036 | None:intergenic | 35.0% |
| !! | GAAGTTGTTGGAAGTTGATA+AGG | + | chr1_1:35316096-35316115 | Msa0020370:intron | 35.0% |
| ACACAAACAAAGCAGCATTA+GGG | - | chr1_1:35316371-35316390 | None:intergenic | 35.0% | |
| TTGTAATCTCAGCATTTGCT+GGG | - | chr1_1:35316464-35316483 | None:intergenic | 35.0% | |
| GCAATACACTATTCAGTACA+AGG | + | chr1_1:35316896-35316915 | Msa0020370:intron | 35.0% | |
| ACAATGCTATAGTACTGTTG+AGG | - | chr1_1:35316938-35316957 | None:intergenic | 35.0% | |
| ACTATAGCATTGTAGCATAG+AGG | + | chr1_1:35316945-35316964 | Msa0020370:intron | 35.0% | |
| CATACTCATACAATAAGCAC+CGG | - | chr1_1:35317108-35317127 | None:intergenic | 35.0% | |
| TTCTCTATAGTACGAGAAAG+CGG | + | chr1_1:35317182-35317201 | Msa0020370:intron | 35.0% | |
| ! | TGCTTGTTACACTTCATAGA+TGG | + | chr1_1:35317374-35317393 | Msa0020370:intron | 35.0% |
| GCTAAACTGAAACTAGAAAG+AGG | - | chr1_1:35317768-35317787 | None:intergenic | 35.0% | |
| CAACAACAATAAACTGCACC+TGG | + | chr1_1:35311649-35311668 | Msa0020370:five_prime_UTR | 40.0% | |
| ACATGACAGACATTGCTTTG+CGG | - | chr1_1:35311678-35311697 | None:intergenic | 40.0% | |
| !! | ATCCCTTTTTGTTTCTTGGC+TGG | - | chr1_1:35312247-35312266 | None:intergenic | 40.0% |
| AGCCAAGAAACAAAAAGGGA+TGG | + | chr1_1:35312246-35312265 | Msa0020370:intron | 40.0% | |
| GCCAAGAAACAAAAAGGGAT+GGG | + | chr1_1:35312247-35312266 | Msa0020370:intron | 40.0% | |
| !! | TCCCATCCCTTTTTGTTTCT+TGG | - | chr1_1:35312251-35312270 | None:intergenic | 40.0% |
| GGAGACAGATTAAAAAGCCA+TGG | - | chr1_1:35312275-35312294 | None:intergenic | 40.0% | |
| ! | TTTTGTGCAGCAGAGAAACA+GGG | - | chr1_1:35312297-35312316 | None:intergenic | 40.0% |
| ! | TTTTTGTGCAGCAGAGAAAC+AGG | - | chr1_1:35312298-35312317 | None:intergenic | 40.0% |
| TTCTCTGCTGCACAAAAAAC+TGG | + | chr1_1:35312300-35312319 | Msa0020370:five_prime_UTR | 40.0% | |
| !!! | GTGATTGAAGGTTTTGGGAA+TGG | - | chr1_1:35312446-35312465 | None:intergenic | 40.0% |
| !!! | GTTTTGGGGTAATGGGTTTT+TGG | - | chr1_1:35312476-35312495 | None:intergenic | 40.0% |
| !!! | TGGTGGATTTGGTTTTGAGA+GGG | - | chr1_1:35312510-35312529 | None:intergenic | 40.0% |
| !!! | ATGGTGGATTTGGTTTTGAG+AGG | - | chr1_1:35312511-35312530 | None:intergenic | 40.0% |
| GAGAACAAAAGGTTTGATGG+TGG | - | chr1_1:35312527-35312546 | None:intergenic | 40.0% | |
| !! | AGAACTGCTCTGAGAACAAA+AGG | - | chr1_1:35312538-35312557 | None:intergenic | 40.0% |
| !!! | TCTTTTTGTGGTTTCTGGTG+GGG | - | chr1_1:35312569-35312588 | None:intergenic | 40.0% |
| !! | GTTCTTTTTGTGGTTTCTGG+TGG | - | chr1_1:35312571-35312590 | None:intergenic | 40.0% |
| ACAGTGTAGATACCCATCTT+CGG | - | chr1_1:35312620-35312639 | None:intergenic | 40.0% | |
| ! | TTTGGAGCATTTGAGAAGCT+TGG | + | chr1_1:35312804-35312823 | Msa0020370:CDS | 40.0% |
| ! | TTGGAGCATTTGAGAAGCTT+GGG | + | chr1_1:35312805-35312824 | Msa0020370:CDS | 40.0% |
| TGGAAATGGGAAAATCTTGG+AGG | + | chr1_1:35313114-35313133 | Msa0020370:CDS | 40.0% | |
| TGGGAAAATCTTGGAGGATT+TGG | + | chr1_1:35313120-35313139 | Msa0020370:CDS | 40.0% | |
| ! | AATCTTGGAGGATTTGGTCT+TGG | + | chr1_1:35313126-35313145 | Msa0020370:CDS | 40.0% |
| TGCAAGAATTGCTGGAAAGA+GGG | + | chr1_1:35313213-35313232 | Msa0020370:CDS | 40.0% | |
| ! | AGAGGGTGAATGTTTTGCTT+CGG | + | chr1_1:35313230-35313249 | Msa0020370:CDS | 40.0% |
| CTTCTTCGTGTCTGTCTAAA+CGG | - | chr1_1:35313417-35313436 | None:intergenic | 40.0% | |
| AGACACGAAGAAGTTTCCAT+AGG | + | chr1_1:35313424-35313443 | Msa0020370:intron | 40.0% | |
| CCAAGCACTAATGGAATTTC+CGG | - | chr1_1:35313618-35313637 | None:intergenic | 40.0% | |
| GAAATTCCATTAGTGCTTGG+AGG | + | chr1_1:35313618-35313637 | Msa0020370:intron | 40.0% | |
| TCAACTTTCACCATCCTCTT+CGG | + | chr1_1:35313668-35313687 | Msa0020370:intron | 40.0% | |
| AGATATTCCACTTCAAGCGT+TGG | + | chr1_1:35313805-35313824 | Msa0020370:intron | 40.0% | |
| GATATTCCACTTCAAGCGTT+GGG | + | chr1_1:35313806-35313825 | Msa0020370:intron | 40.0% | |
| !! | TGACAGCAAAAGTGTTAGAG+AGG | + | chr1_1:35313853-35313872 | Msa0020370:intron | 40.0% |
| TGTACGTAGGCAAGCAAATA+TGG | + | chr1_1:35313973-35313992 | Msa0020370:intron | 40.0% | |
| TGAAGGCAAAAACGAGAAGA+GGG | - | chr1_1:35314231-35314250 | None:intergenic | 40.0% | |
| ATGAAGGCAAAAACGAGAAG+AGG | - | chr1_1:35314232-35314251 | None:intergenic | 40.0% | |
| TTATTCCCTGTGGCAACATA+AGG | - | chr1_1:35314393-35314412 | None:intergenic | 40.0% | |
| TTAGAAATGAGAAGCTGCAG+TGG | + | chr1_1:35314430-35314449 | Msa0020370:CDS | 40.0% | |
| !! | GTGGTTTTTAGATGCTGTCA+AGG | + | chr1_1:35314449-35314468 | Msa0020370:CDS | 40.0% |
| ! | CTACAAGCTTTAGCTCAACA+GGG | - | chr1_1:35314479-35314498 | None:intergenic | 40.0% |
| CTGTTGAGCTAAAGCTTGTA+GGG | + | chr1_1:35314478-35314497 | Msa0020370:CDS | 40.0% | |
| TGTTGAGCTAAAGCTTGTAG+GGG | + | chr1_1:35314479-35314498 | Msa0020370:CDS | 40.0% | |
| TCTTGGATCAACCATTACCA+AGG | + | chr1_1:35314512-35314531 | Msa0020370:CDS | 40.0% | |
| CATCTTGTGCGTTATCACTT+TGG | + | chr1_1:35314565-35314584 | Msa0020370:intron | 40.0% | |
| CATCCCTGAAAATATCTACC+TGG | - | chr1_1:35314777-35314796 | None:intergenic | 40.0% | |
| !! | GGTAGATATTTTCAGGGATG+CGG | + | chr1_1:35314777-35314796 | Msa0020370:intron | 40.0% |
| TATTGACGAAATTCGAGCTC+AGG | + | chr1_1:35314819-35314838 | Msa0020370:CDS | 40.0% | |
| ATTGACGAAATTCGAGCTCA+GGG | + | chr1_1:35314820-35314839 | Msa0020370:CDS | 40.0% | |
| GGGATCGATTATTATCATGC+CGG | + | chr1_1:35314880-35314899 | Msa0020370:CDS | 40.0% | |
| TTAGATCTCTGGGTTTAGGA+AGG | - | chr1_1:35314912-35314931 | None:intergenic | 40.0% | |
| CACAAGCAGATAGAAAGAAG+CGG | - | chr1_1:35315147-35315166 | None:intergenic | 40.0% | |
| ATCTGCTTGTGAATGTCACA+TGG | + | chr1_1:35315156-35315175 | Msa0020370:intron | 40.0% | |
| ATTAGCAGGGATACTGTGAA+AGG | - | chr1_1:35315212-35315231 | None:intergenic | 40.0% | |
| ! | TTTTACGGTTGGAGTAGGTA+CGG | + | chr1_1:35315241-35315260 | Msa0020370:intron | 40.0% |
| ! | TTTGCTATAAGTGATCTCCC+TGG | - | chr1_1:35315306-35315325 | None:intergenic | 40.0% |
| ! | TTTTCTCTGGTGTGAGTTTC+TGG | - | chr1_1:35315636-35315655 | None:intergenic | 40.0% |
| ! | CTATTTAAGGGGTGTGAATG+GGG | - | chr1_1:35315836-35315855 | None:intergenic | 40.0% |
| ! | CACTATTTAAGGGGTGTGAA+TGG | - | chr1_1:35315838-35315857 | None:intergenic | 40.0% |
| ! | GAAGGGGTAAAAAGGTACAT+GGG | - | chr1_1:35315917-35315936 | None:intergenic | 40.0% |
| ! | AGAAGGGGTAAAAAGGTACA+TGG | - | chr1_1:35315918-35315937 | None:intergenic | 40.0% |
| ! | TGGCAGGTTTATTCTAGAAG+GGG | - | chr1_1:35315933-35315952 | None:intergenic | 40.0% |
| ! | GTGGCAGGTTTATTCTAGAA+GGG | - | chr1_1:35315934-35315953 | None:intergenic | 40.0% |
| TGTGGCAGGTTTATTCTAGA+AGG | - | chr1_1:35315935-35315954 | None:intergenic | 40.0% | |
| AGAATAAACCTGCCACACTT+TGG | + | chr1_1:35315938-35315957 | Msa0020370:intron | 40.0% | |
| GAATAAACCTGCCACACTTT+GGG | + | chr1_1:35315939-35315958 | Msa0020370:intron | 40.0% | |
| TTGATCCATCATAAGGCTGT+GGG | - | chr1_1:35315966-35315985 | None:intergenic | 40.0% | |
| ATTGATCCATCATAAGGCTG+TGG | - | chr1_1:35315967-35315986 | None:intergenic | 40.0% | |
| ! | TGATGGATCAATGATTGCTC+TGG | + | chr1_1:35315975-35315994 | Msa0020370:intron | 40.0% |
| ! | GGACTGGTACTAACAATGAT+GGG | - | chr1_1:35316001-35316020 | None:intergenic | 40.0% |
| ! | AGGACTGGTACTAACAATGA+TGG | - | chr1_1:35316002-35316021 | None:intergenic | 40.0% |
| ACTGCTGTGCTAACTTTAAC+TGG | - | chr1_1:35316045-35316064 | None:intergenic | 40.0% | |
| GACACAAACAAAGCAGCATT+AGG | - | chr1_1:35316372-35316391 | None:intergenic | 40.0% | |
| ! | TGTAATCTCAGCATTTGCTG+GGG | - | chr1_1:35316463-35316482 | None:intergenic | 40.0% |
| GTTGTAATCTCAGCATTTGC+TGG | - | chr1_1:35316465-35316484 | None:intergenic | 40.0% | |
| AATCTGCAGACTCACAAACA+GGG | - | chr1_1:35316503-35316522 | None:intergenic | 40.0% | |
| AAATCTGCAGACTCACAAAC+AGG | - | chr1_1:35316504-35316523 | None:intergenic | 40.0% | |
| TTGTGAGTCTGCAGATTTCT+TGG | + | chr1_1:35316506-35316525 | Msa0020370:CDS | 40.0% | |
| TGTGAGTCTGCAGATTTCTT+GGG | + | chr1_1:35316507-35316526 | Msa0020370:CDS | 40.0% | |
| TCTGCAGATTTCTTGGGAAA+AGG | + | chr1_1:35316513-35316532 | Msa0020370:CDS | 40.0% | |
| ATACATCATAGTACCTTGGC+AGG | - | chr1_1:35316555-35316574 | None:intergenic | 40.0% | |
| CGATCTGCAATTGACAACAT+TGG | + | chr1_1:35316806-35316825 | Msa0020370:intron | 40.0% | |
| CGATCTGCAATTCTCAACAT+TGG | + | chr1_1:35316993-35317012 | Msa0020370:intron | 40.0% | |
| CGGTGCTTATTGTATGAGTA+TGG | + | chr1_1:35317106-35317125 | Msa0020370:CDS | 40.0% | |
| TTCTCGTACTATAGAGAAGC+TGG | - | chr1_1:35317180-35317199 | None:intergenic | 40.0% | |
| TCACTGAGCAAAATCAGACA+CGG | + | chr1_1:35317576-35317595 | Msa0020370:CDS | 40.0% | |
| TCACATTCTTGAGCAAGGAA+AGG | - | chr1_1:35317693-35317712 | None:intergenic | 40.0% | |
| CATGACAGACATTGCTTTGC+GGG | - | chr1_1:35311677-35311696 | None:intergenic | 45.0% | |
| !! | TGGCTGGTTTGAGAAGAAAG+AGG | - | chr1_1:35312231-35312250 | None:intergenic | 45.0% |
| TTTGTGCAGCAGAGAAACAG+GGG | - | chr1_1:35312296-35312315 | None:intergenic | 45.0% | |
| !! | ACGAGGGCTTTGTTTGACTT+TGG | + | chr1_1:35312375-35312394 | Msa0020370:five_prime_UTR | 45.0% |
| ! | GACTTTGGTTTCCATCACCA+TGG | + | chr1_1:35312390-35312409 | Msa0020370:exon | 45.0% |
| TTGGTTTCCATCACCATGGT+AGG | + | chr1_1:35312394-35312413 | Msa0020370:exon | 45.0% | |
| GAATGGAACAAGAGTGAGAG+AGG | - | chr1_1:35312429-35312448 | None:intergenic | 45.0% | |
| !!! | TGAGGAGGTTTTGGGGTAAT+GGG | - | chr1_1:35312483-35312502 | None:intergenic | 45.0% |
| !!! | ATGAGGAGGTTTTGGGGTAA+TGG | - | chr1_1:35312484-35312503 | None:intergenic | 45.0% |
| ! | AGGGAGAATGAGGAGGTTTT+GGG | - | chr1_1:35312491-35312510 | None:intergenic | 45.0% |
| !! | TTTTGAGAGGGAGAATGAGG+AGG | - | chr1_1:35312498-35312517 | None:intergenic | 45.0% |
| !!! | TGGTTTTGAGAGGGAGAATG+AGG | - | chr1_1:35312501-35312520 | None:intergenic | 45.0% |
| GATGGGTATCTACACTGTGA+AGG | + | chr1_1:35312622-35312641 | Msa0020370:CDS | 45.0% | |
| TCGCAAGGTGGATGAGATTA+TGG | + | chr1_1:35312645-35312664 | Msa0020370:CDS | 45.0% | |
| ! | CATTTGAGAAGCTTGGGTTG+TGG | + | chr1_1:35312811-35312830 | Msa0020370:CDS | 45.0% |
| !! | TGTGGTGCTGTTCTTGTTAG+TGG | + | chr1_1:35312829-35312848 | Msa0020370:CDS | 45.0% |
| TGGATTTGATCCCACAAGGT+TGG | + | chr1_1:35312879-35312898 | Msa0020370:intron | 45.0% | |
| CTGCAAGAATTGCTGGAAAG+AGG | + | chr1_1:35313212-35313231 | Msa0020370:CDS | 45.0% | |
| TAATCCTGATGTTGATCCGC+AGG | + | chr1_1:35313255-35313274 | Msa0020370:CDS | 45.0% | |
| TATACCTGCGGATCAACATC+AGG | - | chr1_1:35313262-35313281 | None:intergenic | 45.0% | |
| CCGGAAATTCCATTAGTGCT+TGG | + | chr1_1:35313615-35313634 | Msa0020370:intron | 45.0% | |
| GTGAAAGTTGAGGCTTAGTG+CGG | - | chr1_1:35313659-35313678 | None:intergenic | 45.0% | |
| GAAGAGGATGGTGAAAGTTG+AGG | - | chr1_1:35313669-35313688 | None:intergenic | 45.0% | |
| !! | TTTGAAGGTACCGAAGAGGA+TGG | - | chr1_1:35313681-35313700 | None:intergenic | 45.0% |
| !!! | CCATTTTGAAGGTACCGAAG+AGG | - | chr1_1:35313685-35313704 | None:intergenic | 45.0% |
| CCTCTTCGGTACCTTCAAAA+TGG | + | chr1_1:35313682-35313701 | Msa0020370:intron | 45.0% | |
| TGCGCCAAGTCTTCAAAATC+AGG | - | chr1_1:35313736-35313755 | None:intergenic | 45.0% | |
| !! | TTTTGCTGTCAGACTCGAAG+TGG | - | chr1_1:35313844-35313863 | None:intergenic | 45.0% |
| GTAAATAGGACACCCTAGCA+AGG | - | chr1_1:35314009-35314028 | None:intergenic | 45.0% | |
| GCAACATAAGGATGGACCTA+AGG | - | chr1_1:35314381-35314400 | None:intergenic | 45.0% | |
| TCCATCCTTATGTTGCCACA+GGG | + | chr1_1:35314385-35314404 | Msa0020370:CDS | 45.0% | |
| ! | CCTACAAGCTTTAGCTCAAC+AGG | - | chr1_1:35314480-35314499 | None:intergenic | 45.0% |
| CCTGTTGAGCTAAAGCTTGT+AGG | + | chr1_1:35314477-35314496 | Msa0020370:CDS | 45.0% | |
| GGTTGATCCAAGATGACAGT+GGG | - | chr1_1:35314505-35314524 | None:intergenic | 45.0% | |
| TGGTTGATCCAAGATGACAG+TGG | - | chr1_1:35314506-35314525 | None:intergenic | 45.0% | |
| GCTGATAGGGTCTATTTGCT+CGG | + | chr1_1:35314692-35314711 | Msa0020370:intron | 45.0% | |
| !! | TTGAATATCGGTGGTGGACT+TGG | + | chr1_1:35314859-35314878 | Msa0020370:CDS | 45.0% |
| !! | TGAATATCGGTGGTGGACTT+GGG | + | chr1_1:35314860-35314879 | Msa0020370:CDS | 45.0% |
| TTTACGGTTGGAGTAGGTAC+GGG | + | chr1_1:35315242-35315261 | Msa0020370:intron | 45.0% | |
| ! | ACACCTGTTGCTTAGTTAGC+CGG | + | chr1_1:35315325-35315344 | Msa0020370:CDS | 45.0% |
| GTGACAGGTGTCAAAACCAA+TGG | + | chr1_1:35315348-35315367 | Msa0020370:CDS | 45.0% | |
| AAGCATCATAGAGACTTGGG+CGG | - | chr1_1:35315419-35315438 | None:intergenic | 45.0% | |
| !! | CTTAGCTCTGGTCAGATCTA+GGG | - | chr1_1:35315744-35315763 | None:intergenic | 45.0% |
| AGTGACGTAGTCAAGTAGCT+TGG | - | chr1_1:35315890-35315909 | None:intergenic | 45.0% | |
| TGATCCATCATAAGGCTGTG+GGG | - | chr1_1:35315965-35315984 | None:intergenic | 45.0% | |
| GAGTTTCATTTGCAGGGTAC+TGG | + | chr1_1:35317065-35317084 | Msa0020370:intron | 45.0% | |
| GTACATACCCAATACTCTGG+AGG | - | chr1_1:35317158-35317177 | None:intergenic | 45.0% | |
| CTGGTACATACCCAATACTC+TGG | - | chr1_1:35317161-35317180 | None:intergenic | 45.0% | |
| CACTGAGCAAAATCAGACAC+GGG | + | chr1_1:35317577-35317596 | Msa0020370:CDS | 45.0% | |
| ACTGAGCAAAATCAGACACG+GGG | + | chr1_1:35317578-35317597 | Msa0020370:CDS | 45.0% | |
| AGACATTCGAAGACCACATG+CGG | + | chr1_1:35317601-35317620 | Msa0020370:CDS | 45.0% | |
| ACAAAAAGGGATGGGACCCA+TGG | + | chr1_1:35312255-35312274 | Msa0020370:five_prime_UTR | 50.0% | |
| TGGAACAAGAGTGAGAGAGG+AGG | - | chr1_1:35312426-35312445 | None:intergenic | 50.0% | |
| ! | GGGAGAATGAGGAGGTTTTG+GGG | - | chr1_1:35312490-35312509 | None:intergenic | 50.0% |
| ! | GAGGGAGAATGAGGAGGTTT+TGG | - | chr1_1:35312492-35312511 | None:intergenic | 50.0% |
| !!! | TGTGGTTTCTGGTGGGGTTT+TGG | - | chr1_1:35312563-35312582 | None:intergenic | 50.0% |
| TCTACACTGTGAAGGTCGCA+AGG | + | chr1_1:35312630-35312649 | Msa0020370:CDS | 50.0% | |
| CTTAAACTCGCTCTTCGTGC+TGG | + | chr1_1:35312859-35312878 | Msa0020370:CDS | 50.0% | |
| GTGCTGGATTTGATCCCACA+AGG | + | chr1_1:35312875-35312894 | Msa0020370:CDS | 50.0% | |
| GCAAGCTGAACCAACCTTGT+GGG | - | chr1_1:35312892-35312911 | None:intergenic | 50.0% | |
| AGCAAGCTGAACCAACCTTG+TGG | - | chr1_1:35312893-35312912 | None:intergenic | 50.0% | |
| GTTGACAAACACGCCTGCTT+CGG | - | chr1_1:35313155-35313174 | None:intergenic | 50.0% | |
| CTGCATCACTGTGGTTGAAG+AGG | - | chr1_1:35313775-35313794 | None:intergenic | 50.0% | |
| !! | TTCCACTTCAAGCGTTGGGT+AGG | + | chr1_1:35313810-35313829 | Msa0020370:intron | 50.0% |
| !! | TCCACTTCAAGCGTTGGGTA+GGG | + | chr1_1:35313811-35313830 | Msa0020370:intron | 50.0% |
| GTCCATCCTTATGTTGCCAC+AGG | + | chr1_1:35314384-35314403 | Msa0020370:CDS | 50.0% | |
| TCCCTGTGGCAACATAAGGA+TGG | - | chr1_1:35314389-35314408 | None:intergenic | 50.0% | |
| AAATGGTTGCCCCTCTTTCC+AGG | + | chr1_1:35314756-35314775 | Msa0020370:intron | 50.0% | |
| ! | CACCTGTTGCTTAGTTAGCC+GGG | + | chr1_1:35315326-35315345 | Msa0020370:CDS | 50.0% |
| !!! | TGGTTTTGACACCTGTCACC+CGG | - | chr1_1:35315347-35315366 | None:intergenic | 50.0% |
| GAGACTTGGGCGGATAAGTT+CGG | - | chr1_1:35315409-35315428 | None:intergenic | 50.0% | |
| !! | GCTTAGCTCTGGTCAGATCT+AGG | - | chr1_1:35315745-35315764 | None:intergenic | 50.0% |
| GACCAGAGCTAAGCTCCTAT+AGG | + | chr1_1:35315751-35315770 | Msa0020370:intron | 50.0% | |
| AGCCTATAGGAGCTTAGCTC+TGG | - | chr1_1:35315756-35315775 | None:intergenic | 50.0% | |
| !! | GCAGCTCTAAGCTAGCCTAT+AGG | - | chr1_1:35315769-35315788 | None:intergenic | 50.0% |
| !! | TGGGGTTGAGAAGGGTATCT+TGG | - | chr1_1:35315818-35315837 | None:intergenic | 50.0% |
| GGTGTGAATGGGGTTGAGAA+GGG | - | chr1_1:35315826-35315845 | None:intergenic | 50.0% | |
| AGAACTTCCAACTCCTGCCA+AGG | + | chr1_1:35316539-35316558 | Msa0020370:CDS | 50.0% | |
| CATAGTACCTTGGCAGGAGT+TGG | - | chr1_1:35316549-35316568 | None:intergenic | 50.0% | |
| !! | TCATTTGCAGGGTACTGGTC+TGG | + | chr1_1:35317070-35317089 | Msa0020370:intron | 50.0% |
| GGTCTGGTTGTTCATGATGC+CGG | + | chr1_1:35317086-35317105 | Msa0020370:CDS | 50.0% | |
| AGATGCGACCTCCAGAGTAT+TGG | + | chr1_1:35317147-35317166 | Msa0020370:CDS | 50.0% | |
| ! | GATGCGACCTCCAGAGTATT+GGG | + | chr1_1:35317148-35317167 | Msa0020370:CDS | 50.0% |
| GACCACATGCGGTTGTTTGA+TGG | + | chr1_1:35317612-35317631 | Msa0020370:CDS | 50.0% | |
| GTGTGTGCCTACCATGGTGA+TGG | - | chr1_1:35312404-35312423 | None:intergenic | 55.0% | |
| ACACTGTGAAGGTCGCAAGG+TGG | + | chr1_1:35312633-35312652 | Msa0020370:CDS | 55.0% | |
| GTGGCAGCTGCAAGAATTGC+TGG | + | chr1_1:35313205-35313224 | Msa0020370:CDS | 55.0% | |
| GGGATCCCTCCAAGCACTAA+TGG | - | chr1_1:35313627-35313646 | None:intergenic | 55.0% | |
| GCTTAGTGCGGATCCATGGA+GGG | - | chr1_1:35313647-35313666 | None:intergenic | 55.0% | |
| TGAGGCTTAGTGCGGATCCA+TGG | - | chr1_1:35313651-35313670 | None:intergenic | 55.0% | |
| TCCCTACCCAACGCTTGAAG+TGG | - | chr1_1:35313815-35313834 | None:intergenic | 55.0% | |
| TGGTCGCTCACAACCTTGCT+AGG | + | chr1_1:35313993-35314012 | Msa0020370:intron | 55.0% | |
| GGTCGCTCACAACCTTGCTA+GGG | + | chr1_1:35313994-35314013 | Msa0020370:intron | 55.0% | |
| CAGGGATGCGGCCACTATTA+TGG | + | chr1_1:35314789-35314808 | Msa0020370:CDS | 55.0% | |
| GGGTTTAGGAAGGACAGCAC+CGG | - | chr1_1:35314902-35314921 | None:intergenic | 55.0% | |
| CTGTGACATGCAGGGACATG+AGG | + | chr1_1:35315075-35315094 | Msa0020370:intron | 55.0% | |
| CACCCGGCTAACTAAGCAAC+AGG | - | chr1_1:35315331-35315350 | None:intergenic | 55.0% | |
| TGCTTAGTTAGCCGGGTGAC+AGG | + | chr1_1:35315333-35315352 | Msa0020370:CDS | 55.0% | |
| GGGTGTGAATGGGGTTGAGA+AGG | - | chr1_1:35315827-35315846 | None:intergenic | 55.0% | |
| ! | ATCTCAGCATTTGCTGGGGC+TGG | - | chr1_1:35316459-35316478 | None:intergenic | 55.0% |
| GGCCATCAAACAACCGCATG+TGG | - | chr1_1:35317617-35317636 | None:intergenic | 55.0% | |
| GACATTGCTTTGCGGGACCC+AGG | - | chr1_1:35311670-35311689 | None:intergenic | 60.0% | |
| ! | GAGGAGGTGTGTGCCTACCA+TGG | - | chr1_1:35312410-35312429 | None:intergenic | 60.0% |
| !! | TTGGTCTTGGCTGCCGAAGC+AGG | + | chr1_1:35313139-35313158 | Msa0020370:CDS | 60.0% |
| TGCTTGGAGGGATCCCTCCA+TGG | + | chr1_1:35313631-35313650 | Msa0020370:intron | 60.0% | |
| GGCTTAGTGCGGATCCATGG+AGG | - | chr1_1:35313648-35313667 | None:intergenic | 60.0% | |
| !! | TCAAGCGTTGGGTAGGGAGC+AGG | + | chr1_1:35313817-35313836 | Msa0020370:intron | 60.0% |
| GTAGGGGCCCACTGTCATCT+TGG | + | chr1_1:35314495-35314514 | Msa0020370:CDS | 60.0% | |
| ! | TGGGCCCCACAGCCTTATGA+TGG | + | chr1_1:35315958-35315977 | Msa0020370:intron | 60.0% |
| TGTGGGGCCCAAAGTGTGGC+AGG | - | chr1_1:35315949-35315968 | None:intergenic | 65.0% | |
| AGGCTGTGGGGCCCAAAGTG+TGG | - | chr1_1:35315953-35315972 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 35311623 | 35317936 | 35311623 | ID=Msa0020370;Name=Msa0020370 |
| chr1_1 | mRNA | 35311623 | 35317936 | 35311623 | ID=Msa0020370-mRNA-1;Parent=Msa0020370;Name=Msa0020370-mRNA-1;_AED=0.16;_eAED=0.16;_QI=364|1|1|1|0.77|0.7|10|295|484 |
| chr1_1 | exon | 35311623 | 35311748 | 35311623 | ID=Msa0020370-mRNA-1:exon:11260;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35311948 | 35312024 | 35311948 | ID=Msa0020370-mRNA-1:exon:11261;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35312248 | 35312896 | 35312248 | ID=Msa0020370-mRNA-1:exon:11262;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35313102 | 35313276 | 35313102 | ID=Msa0020370-mRNA-1:exon:11263;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35314384 | 35314533 | 35314384 | ID=Msa0020370-mRNA-1:exon:11264;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35314778 | 35314939 | 35314778 | ID=Msa0020370-mRNA-1:exon:11265;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35315258 | 35315443 | 35315258 | ID=Msa0020370-mRNA-1:exon:11266;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35316438 | 35316560 | 35316438 | ID=Msa0020370-mRNA-1:exon:11267;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35317080 | 35317169 | 35317080 | ID=Msa0020370-mRNA-1:exon:11268;Parent=Msa0020370-mRNA-1 |
| chr1_1 | exon | 35317561 | 35317936 | 35317561 | ID=Msa0020370-mRNA-1:exon:11269;Parent=Msa0020370-mRNA-1 |
| chr1_1 | five_prime_UTR | 35311623 | 35311748 | 35311623 | ID=Msa0020370-mRNA-1:five_prime_utr;Parent=Msa0020370-mRNA-1 |
| chr1_1 | five_prime_UTR | 35311948 | 35312024 | 35311948 | ID=Msa0020370-mRNA-1:five_prime_utr;Parent=Msa0020370-mRNA-1 |
| chr1_1 | five_prime_UTR | 35312248 | 35312408 | 35312248 | ID=Msa0020370-mRNA-1:five_prime_utr;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35312409 | 35312896 | 35312409 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35313102 | 35313276 | 35313102 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35314384 | 35314533 | 35314384 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35314778 | 35314939 | 35314778 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35315258 | 35315443 | 35315258 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35316438 | 35316560 | 35316438 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35317080 | 35317169 | 35317080 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | CDS | 35317561 | 35317641 | 35317561 | ID=Msa0020370-mRNA-1:cds;Parent=Msa0020370-mRNA-1 |
| chr1_1 | three_prime_UTR | 35317642 | 35317936 | 35317642 | ID=Msa0020370-mRNA-1:three_prime_utr;Parent=Msa0020370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
