Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025810 | KAG4996207.1 | 45.923 | 233 | 63 | 5 | 77 | 303 | 1 | 176 | 3.20e-53 | 183 |
| Msa0025810 | KAG4996207.1 | 46.018 | 226 | 67 | 5 | 1 | 210 | 1 | 187 | 2.12e-49 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000940 | Msa0025810 | 0.813948 | 1.976433e-51 | -8.615850e-47 |
| Msa0025810 | Msa0165900 | 0.850060 | 2.166974e-60 | -8.615850e-47 |
| Msa0025810 | Msa1114040 | 0.815251 | 1.017580e-51 | -8.615850e-47 |
| Msa0025810 | Msa1133630 | 0.807032 | 6.161021e-50 | -8.615850e-47 |
| Msa0025810 | Msa1373880 | 0.803401 | 3.547518e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025810 | MtrunA17_Chr1g0180751 | 63.504 | 137 | 11 | 1 | 77 | 213 | 1 | 98 | 1.47e-49 | 160 |
| Msa0025810 | MtrunA17_Chr1g0180751 | 90.476 | 84 | 8 | 0 | 220 | 303 | 1 | 84 | 2.74e-47 | 154 |
| Msa0025810 | MtrunA17_Chr1g0180751 | 63.855 | 83 | 24 | 1 | 1 | 77 | 1 | 83 | 8.51e-27 | 101 |
| Msa0025810 | MtrunA17_Chr1g0180741 | 91.667 | 84 | 7 | 0 | 220 | 303 | 1 | 84 | 7.77e-48 | 155 |
| Msa0025810 | MtrunA17_Chr1g0180741 | 62.044 | 137 | 13 | 1 | 77 | 213 | 1 | 98 | 8.47e-48 | 155 |
| Msa0025810 | MtrunA17_Chr1g0180741 | 66.265 | 83 | 22 | 1 | 1 | 77 | 1 | 83 | 1.20e-28 | 105 |
| Msa0025810 | MtrunA17_Chr1g0180731 | 90.909 | 77 | 7 | 0 | 1 | 77 | 1 | 77 | 6.21e-44 | 145 |
| Msa0025810 | MtrunA17_Chr1g0180731 | 52.985 | 134 | 18 | 2 | 77 | 210 | 1 | 89 | 1.95e-34 | 121 |
| Msa0025810 | MtrunA17_Chr1g0180731 | 66.667 | 84 | 22 | 1 | 220 | 303 | 1 | 78 | 3.94e-31 | 112 |
| Msa0025810 | MtrunA17_Chr1g0180711 | 43.885 | 139 | 44 | 3 | 77 | 214 | 1 | 106 | 1.03e-27 | 103 |
| Msa0025810 | MtrunA17_Chr1g0180711 | 52.747 | 91 | 36 | 1 | 220 | 303 | 1 | 91 | 4.44e-25 | 97.1 |
| Msa0025810 | MtrunA17_Chr1g0180711 | 53.333 | 90 | 29 | 2 | 1 | 77 | 1 | 90 | 7.52e-22 | 88.6 |
| Msa0025810 | MtrunA17_Chr1g0180691 | 41.727 | 139 | 49 | 2 | 77 | 214 | 1 | 108 | 1.71e-27 | 103 |
| Msa0025810 | MtrunA17_Chr1g0180691 | 50.538 | 93 | 37 | 1 | 220 | 303 | 1 | 93 | 6.64e-24 | 94.0 |
| Msa0025810 | MtrunA17_Chr1g0180691 | 53.261 | 92 | 28 | 2 | 1 | 77 | 1 | 92 | 8.05e-23 | 90.9 |
| Msa0025810 | MtrunA17_Chr1g0180721 | 42.336 | 137 | 47 | 2 | 77 | 213 | 1 | 105 | 6.04e-26 | 99.4 |
| Msa0025810 | MtrunA17_Chr1g0180721 | 52.747 | 91 | 36 | 1 | 220 | 303 | 1 | 91 | 2.07e-24 | 95.1 |
| Msa0025810 | MtrunA17_Chr1g0180721 | 54.444 | 90 | 28 | 2 | 1 | 77 | 1 | 90 | 4.61e-22 | 89.0 |
| Msa0025810 | MtrunA17_Chr1g0180701 | 50.526 | 95 | 35 | 2 | 220 | 303 | 1 | 94 | 2.79e-22 | 89.7 |
| Msa0025810 | MtrunA17_Chr1g0180701 | 51.613 | 93 | 29 | 2 | 1 | 77 | 1 | 93 | 9.11e-22 | 88.6 |
| Msa0025810 | MtrunA17_Chr1g0180701 | 41.176 | 136 | 51 | 4 | 77 | 212 | 1 | 107 | 9.30e-22 | 88.2 |
| Msa0025810 | MtrunA17_Chr7g0264551 | 51.515 | 66 | 32 | 0 | 150 | 215 | 55 | 120 | 2.48e-19 | 82.0 |
| Msa0025810 | MtrunA17_Chr7g0264551 | 38.889 | 108 | 44 | 4 | 224 | 310 | 12 | 118 | 3.51e-15 | 70.9 |
| Msa0025810 | MtrunA17_Chr7g0264551 | 50.000 | 52 | 26 | 0 | 26 | 77 | 52 | 103 | 4.91e-12 | 62.0 |
| Msa0025810 | MtrunA17_Chr2g0327281 | 43.529 | 85 | 43 | 2 | 221 | 303 | 18 | 99 | 6.61e-16 | 73.2 |
| Msa0025810 | MtrunA17_Chr2g0327281 | 29.197 | 137 | 53 | 3 | 78 | 212 | 18 | 112 | 1.08e-12 | 64.3 |
| Msa0025810 | MtrunA17_Chr2g0327281 | 39.241 | 79 | 45 | 2 | 1 | 77 | 21 | 98 | 9.60e-12 | 61.6 |
| Msa0025810 | MtrunA17_Chr7g0264571 | 48.529 | 68 | 33 | 1 | 150 | 217 | 38 | 103 | 8.78e-15 | 69.7 |
| Msa0025810 | MtrunA17_Chr7g0264571 | 47.059 | 68 | 32 | 1 | 236 | 303 | 24 | 87 | 3.56e-12 | 62.4 |
| Msa0025810 | MtrunA17_Chr4g0028491 | 44.776 | 67 | 37 | 0 | 150 | 216 | 41 | 107 | 4.12e-14 | 67.8 |
| Msa0025810 | MtrunA17_Chr4g0028491 | 42.029 | 69 | 40 | 0 | 239 | 307 | 26 | 94 | 3.74e-12 | 62.4 |
| Msa0025810 | MtrunA17_Chr4g0028481 | 35.417 | 96 | 55 | 2 | 219 | 307 | 1 | 96 | 6.47e-12 | 62.4 |
| Msa0025810 | MtrunA17_Chr4g0028481 | 45.714 | 70 | 34 | 2 | 150 | 216 | 41 | 109 | 8.45e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025810 | AT3G09870.1 | 36.957 | 92 | 49 | 2 | 217 | 303 | 10 | 97 | 4.78e-15 | 70.5 |
| Msa0025810 | AT3G09870.1 | 48.438 | 64 | 33 | 0 | 150 | 213 | 48 | 111 | 4.63e-14 | 67.8 |
| Msa0025810 | AT3G09870.1 | 48.276 | 58 | 30 | 0 | 20 | 77 | 39 | 96 | 6.62e-12 | 62.0 |
| Msa0025810 | AT2G28085.1 | 46.269 | 67 | 32 | 2 | 240 | 303 | 44 | 109 | 8.51e-13 | 64.7 |
| Msa0025810 | AT2G28085.1 | 48.485 | 66 | 30 | 2 | 150 | 212 | 58 | 122 | 1.33e-11 | 61.2 |
Find 55 sgRNAs with CRISPR-Local
Find 1222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCATTCAAGTAGCTTT+TGG | 0.217295 | 1_1:-49416370 | None:intergenic |
| CTTGAGTGATCCTGAATTCT+TGG | 0.260796 | 1_1:+49434861 | Msa0025810:CDS |
| TGAAGGATGGAGAATTTAAA+AGG | 0.270066 | 1_1:+49422125 | Msa0025810:CDS |
| TTTGAGTGATCCTGAATTCT+TGG | 0.275509 | 1_1:+49422168 | Msa0025810:CDS |
| TGAAGGATGGAGAAATTAAA+AGG | 0.286488 | 1_1:+49434818 | Msa0025810:CDS |
| TATCCTTCCCTAACATCTTC+TGG | 0.288336 | 1_1:-49422085 | None:intergenic |
| TGATTATTGTTGATAGAATT+AGG | 0.288618 | 1_1:-49437437 | None:intergenic |
| AGTTGGTTCCAGAAGATGTT+AGG | 0.302674 | 1_1:+49422077 | Msa0025810:CDS |
| TATCCTTCCCTAACATCTTC+TGG | 0.335362 | 1_1:-49434778 | None:intergenic |
| AGTTGGTGCCAGAAGATGTT+AGG | 0.347985 | 1_1:+49434770 | Msa0025810:CDS |
| GAATTCTTGCAGTCCCTTGT+AGG | 0.376417 | 1_1:+49424840 | Msa0025810:CDS |
| TCTAGTAATCCCAAGAATTC+AGG | 0.376886 | 1_1:-49422178 | None:intergenic |
| TCAAGTAGTCCCAAGAATTC+AGG | 0.376886 | 1_1:-49434871 | None:intergenic |
| GATCAAGCTCAAGAAGAGTA+TGG | 0.381723 | 1_1:+49434892 | Msa0025810:CDS |
| GAAATTAAAAGGTTTATCAT+TGG | 0.385724 | 1_1:+49434829 | Msa0025810:CDS |
| GAAATGAAAAGGTTTATGAT+TGG | 0.397391 | 1_1:+49416435 | Msa0025810:CDS |
| GAAATGAAAAGGTTTATGAT+TGG | 0.397391 | 1_1:+49424740 | Msa0025810:CDS |
| TTTGTTGGGAAGATACAAAA+AGG | 0.397955 | 1_1:+49434706 | Msa0025810:CDS |
| TTTGTTGGAAGGATACAAAA+AGG | 0.401680 | 1_1:+49422013 | Msa0025810:CDS |
| AAATGAAAAGGTTTATGATT+GGG | 0.411964 | 1_1:+49416436 | Msa0025810:CDS |
| AAATGAAAAGGTTTATGATT+GGG | 0.411964 | 1_1:+49424741 | Msa0025810:CDS |
| TTGAGTGATCCTGAATTCTT+GGG | 0.415294 | 1_1:+49422169 | Msa0025810:CDS |
| CTTTGCTGTTGTTGCAATGA+AGG | 0.428488 | 1_1:+49422108 | Msa0025810:CDS |
| GATCAAGCTCAAGAAGAGTA+TGG | 0.435802 | 1_1:+49422199 | Msa0025810:CDS |
| GACCAAGCTAGGGAAGAGTA+TGG | 0.436156 | 1_1:+49416498 | Msa0025810:CDS |
| TTTCACACTTTGTACACAAA+AGG | 0.443547 | 1_1:+49422038 | Msa0025810:CDS |
| TTTCACACTTTGTACACAAA+AGG | 0.443547 | 1_1:+49434731 | Msa0025810:CDS |
| GAATTTAAAAGGTTTATCAT+TGG | 0.444211 | 1_1:+49422136 | Msa0025810:CDS |
| AACCATCCTCTTCCTTAGCT+TGG | 0.448116 | 1_1:-49424805 | None:intergenic |
| GTTGGTTCCAGAAGATGTTA+GGG | 0.452774 | 1_1:+49422078 | Msa0025810:CDS |
| TTGAGTGATCCTGAATTCTT+GGG | 0.460747 | 1_1:+49434862 | Msa0025810:CDS |
| GAATTACAGAACATTCTAGA+TGG | 0.465075 | 1_1:+49424869 | Msa0025810:CDS |
| TGGGATTACTTGACCAAGCT+AGG | 0.465160 | 1_1:+49416487 | Msa0025810:CDS |
| GCAAGATTTCAGTGAAGAGT+TGG | 0.476421 | 1_1:+49422060 | Msa0025810:CDS |
| TGTAATTCTTGAGGCCTACA+AGG | 0.485287 | 1_1:-49424854 | None:intergenic |
| GTTGGTGCCAGAAGATGTTA+GGG | 0.490377 | 1_1:+49434771 | Msa0025810:CDS |
| AACCATACTCTTCCCTAGCT+TGG | 0.491072 | 1_1:-49416500 | None:intergenic |
| TCAAAGATGGAGAAATGAAA+AGG | 0.502567 | 1_1:+49416424 | Msa0025810:CDS |
| TCAAAGATGGAGAAATGAAA+AGG | 0.502567 | 1_1:+49424729 | Msa0025810:CDS |
| GCAAGATTTCAGTGAAGAGT+TGG | 0.520392 | 1_1:+49434753 | Msa0025810:CDS |
| GCTGTGGTTGCAATCAAAGA+TGG | 0.520821 | 1_1:+49416411 | Msa0025810:CDS |
| GCTGTGGTTGCAATCAAAGA+TGG | 0.520821 | 1_1:+49424716 | Msa0025810:CDS |
| GGGATTACTTGACCAAGCTA+AGG | 0.568634 | 1_1:+49424793 | Msa0025810:CDS |
| TAGAACAGAAGAGCATCAAA+TGG | 0.571880 | 1_1:+49424902 | Msa0025810:CDS |
| GCTGTTGTTGCAATGAAGGA+TGG | 0.572530 | 1_1:+49422112 | Msa0025810:CDS |
| GCTGTTGTTGCAATGAAGGA+TGG | 0.575013 | 1_1:+49434805 | Msa0025810:CDS |
| AGAATGTTCTGTAATTCTTG+AGG | 0.578966 | 1_1:-49424863 | None:intergenic |
| ACTTGACCAAGCTAAGGAAG+AGG | 0.581185 | 1_1:+49424799 | Msa0025810:CDS |
| GGGATTACTTGACCAAGCTA+GGG | 0.584919 | 1_1:+49416488 | Msa0025810:CDS |
| TTGAATGAAGATGTTAGAGA+AGG | 0.589268 | 1_1:+49416381 | Msa0025810:CDS |
| GTTCCAGAAGATGTTAGGGA+AGG | 0.609759 | 1_1:+49422082 | Msa0025810:CDS |
| GAGTATGGTTTCAAACAGCA+AGG | 0.614286 | 1_1:+49416513 | Msa0025810:CDS |
| GTAATTCTTGAGGCCTACAA+GGG | 0.615759 | 1_1:-49424853 | None:intergenic |
| GACCAAGCTAAGGAAGAGGA+TGG | 0.617052 | 1_1:+49424803 | Msa0025810:CDS |
| GTGCCAGAAGATGTTAGGGA+AGG | 0.645187 | 1_1:+49434775 | Msa0025810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATATATAAATATAT+CGG | + | chr1_1:49430632-49430651 | Msa0025810:intron | 0.0% |
| !! | TAAAATAATACAATTAATGA+AGG | - | chr1_1:49417134-49417153 | None:intergenic | 10.0% |
| !!! | CATTAATTGTATTATTTTAT+TGG | + | chr1_1:49417135-49417154 | Msa0025810:intron | 10.0% |
| !! | AAAAAAAAACAAAACTAAAA+TGG | - | chr1_1:49417482-49417501 | None:intergenic | 10.0% |
| !! | AAAAAAAAACTAAACTAAAA+TGG | + | chr1_1:49417839-49417858 | Msa0025810:intron | 10.0% |
| !!! | GTTTTCATTTTTTTTTTTAA+GGG | - | chr1_1:49418349-49418368 | None:intergenic | 10.0% |
| !!! | TGTTTTCATTTTTTTTTTTA+AGG | - | chr1_1:49418350-49418369 | None:intergenic | 10.0% |
| !! | CAGTAATTAATTAAAAAAAA+AGG | - | chr1_1:49419487-49419506 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGAAAAATTCTA+AGG | - | chr1_1:49420964-49420983 | None:intergenic | 10.0% |
| !! | ACTGAAAATAAATTAAATAA+AGG | + | chr1_1:49425412-49425431 | Msa0025810:intron | 10.0% |
| !!! | TAAAGATTTTTTTTTAAGTA+GGG | + | chr1_1:49425516-49425535 | Msa0025810:intron | 10.0% |
| !!! | AAAGTTTTAATTTAAATTCA+TGG | - | chr1_1:49426351-49426370 | None:intergenic | 10.0% |
| !!! | ATATTAAAACTTTTATCAAT+TGG | + | chr1_1:49427544-49427563 | Msa0025810:intron | 10.0% |
| !! | ATATTTATATGTTATTGTTT+GGG | + | chr1_1:49428357-49428376 | Msa0025810:intron | 10.0% |
| !!! | ATAAAAAAATATTTTCTCAT+AGG | - | chr1_1:49428678-49428697 | None:intergenic | 10.0% |
| !!! | TATGAGAAAATATTTTTTTA+TGG | + | chr1_1:49428677-49428696 | Msa0025810:intron | 10.0% |
| !! | TATATTTATTCTTGATTTAT+GGG | + | chr1_1:49428862-49428881 | Msa0025810:intron | 10.0% |
| !! | ATTGAAAACAAAATATTATT+AGG | - | chr1_1:49429229-49429248 | None:intergenic | 10.0% |
| !!! | AAATTTAGAGTAATAAATTA+CGG | - | chr1_1:49429364-49429383 | None:intergenic | 10.0% |
| !!! | TATTTATAATATTCTGAAAA+AGG | - | chr1_1:49429920-49429939 | None:intergenic | 10.0% |
| !! | AATTCAAAATGTAATAATAT+TGG | - | chr1_1:49430589-49430608 | None:intergenic | 10.0% |
| !! | TATATAAAAAAATCACATTT+AGG | - | chr1_1:49430621-49430640 | None:intergenic | 10.0% |
| !! | ACTATATTTATAAAATTCTT+TGG | + | chr1_1:49431342-49431361 | Msa0025810:intron | 10.0% |
| !! | ATTGATAAAATATGTATTTA+AGG | + | chr1_1:49431461-49431480 | Msa0025810:intron | 10.0% |
| !! | TTGATAAAATATGTATTTAA+GGG | + | chr1_1:49431462-49431481 | Msa0025810:intron | 10.0% |
| !!! | AAATAAATTTTCACAAAAAT+AGG | - | chr1_1:49436265-49436284 | None:intergenic | 10.0% |
| !! | AAAATGAAAACAAGTAAATT+AGG | + | chr1_1:49416950-49416969 | Msa0025810:intron | 15.0% |
| !! | AAAAATGAGTTAAAAAAACA+AGG | - | chr1_1:49417054-49417073 | None:intergenic | 15.0% |
| !! | ATTTCTTACTAAAAATTGAA+AGG | - | chr1_1:49419297-49419316 | None:intergenic | 15.0% |
| !! | GAAATTTAAATTTAAATTCC+AGG | - | chr1_1:49419446-49419465 | None:intergenic | 15.0% |
| !!! | AGTTTTGTCTTAAAAAAAAA+AGG | + | chr1_1:49419839-49419858 | Msa0025810:intron | 15.0% |
| !!! | GTTTTGTCTTAAAAAAAAAA+GGG | + | chr1_1:49419840-49419859 | Msa0025810:intron | 15.0% |
| !! | TCTACTATTTGAAAATTTAA+AGG | + | chr1_1:49420083-49420102 | Msa0025810:intron | 15.0% |
| !! | AAGCAATTGAAAAATTAATT+TGG | + | chr1_1:49420121-49420140 | Msa0025810:intron | 15.0% |
| !! | AAATGAAATCACAATAAATA+TGG | + | chr1_1:49420244-49420263 | Msa0025810:intron | 15.0% |
| !! | TATTTGTATCCAATATATAT+AGG | + | chr1_1:49420410-49420429 | Msa0025810:intron | 15.0% |
| !!! | TGTTTAATTTTGATTTAATC+AGG | + | chr1_1:49420789-49420808 | Msa0025810:intron | 15.0% |
| !!! | GTTTAATTTTGATTTAATCA+GGG | + | chr1_1:49420790-49420809 | Msa0025810:intron | 15.0% |
| !!! | TATTTTTACACTATATTTAG+AGG | + | chr1_1:49421003-49421022 | Msa0025810:intron | 15.0% |
| !! | TAGATCTCTTAAAATTTAAT+TGG | + | chr1_1:49421046-49421065 | Msa0025810:intron | 15.0% |
| !! | AGATCTCTTAAAATTTAATT+GGG | + | chr1_1:49421047-49421066 | Msa0025810:intron | 15.0% |
| !! | ATTGATTGATTATTATTGAT+AGG | - | chr1_1:49421783-49421802 | None:intergenic | 15.0% |
| !! | TCAACTATAATTATTAAAGA+TGG | + | chr1_1:49421982-49422001 | Msa0025810:intron | 15.0% |
| !! | GAATTGTTATAAGAAAATAA+TGG | - | chr1_1:49422421-49422440 | None:intergenic | 15.0% |
| !!! | TTTAAATTTAAAACTGTAAC+CGG | + | chr1_1:49422619-49422638 | Msa0025810:intron | 15.0% |
| !!! | TTCAACTAAAAAAAACTTTT+TGG | + | chr1_1:49423425-49423444 | Msa0025810:intron | 15.0% |
| !!! | ATTTTTTAGTTGTATTGTAT+TGG | - | chr1_1:49424319-49424338 | None:intergenic | 15.0% |
| !! | AAATTAGAAATAACATTGAA+GGG | + | chr1_1:49425365-49425384 | Msa0025810:intron | 15.0% |
| !! | TAAATAAAGGTAAATTAAAC+AGG | + | chr1_1:49425425-49425444 | Msa0025810:intron | 15.0% |
| !! | TATTTGAATTATAACAGATT+TGG | + | chr1_1:49425459-49425478 | Msa0025810:intron | 15.0% |
| !!! | GTAAAGATTTTTTTTTAAGT+AGG | + | chr1_1:49425515-49425534 | Msa0025810:intron | 15.0% |
| !! | TTTAAATGAAAATAAGACAT+TGG | + | chr1_1:49425644-49425663 | Msa0025810:intron | 15.0% |
| !!! | TACTTTGTTTTTTTTCTTTT+AGG | + | chr1_1:49426024-49426043 | Msa0025810:intron | 15.0% |
| !!! | ACTTTGTTTTTTTTCTTTTA+GGG | + | chr1_1:49426025-49426044 | Msa0025810:intron | 15.0% |
| !! | ATTTCTTACTAAAAATTGAA+AGG | - | chr1_1:49419297-49419316 | None:intergenic | 15.0% |
| !! | TGATGTCATAATATAAATTA+TGG | + | chr1_1:49427185-49427204 | Msa0025810:intron | 15.0% |
| !! | AACTTGTATTTATTAATCTA+TGG | + | chr1_1:49427517-49427536 | Msa0025810:intron | 15.0% |
| !! | AAAAATTAGAATGAATCATA+TGG | - | chr1_1:49427654-49427673 | None:intergenic | 15.0% |
| !!! | TATGATTCATTCTAATTTTT+TGG | + | chr1_1:49427654-49427673 | Msa0025810:intron | 15.0% |
| !!! | AATTTAAGATTGAAATTGTA+GGG | - | chr1_1:49427910-49427929 | None:intergenic | 15.0% |
| !!! | AAATTTAAGATTGAAATTGT+AGG | - | chr1_1:49427911-49427930 | None:intergenic | 15.0% |
| !! | GATATTTATATGTTATTGTT+TGG | + | chr1_1:49428356-49428375 | Msa0025810:intron | 15.0% |
| !! | TATTTATATGTTATTGTTTG+GGG | + | chr1_1:49428358-49428377 | Msa0025810:intron | 15.0% |
| !!! | TATTCTATACCTTTAAAATT+TGG | + | chr1_1:49428549-49428568 | Msa0025810:intron | 15.0% |
| !!! | ATTCTATACCTTTAAAATTT+GGG | + | chr1_1:49428550-49428569 | Msa0025810:intron | 15.0% |
| !!! | ATTTAAATCCCAAATTTTAA+AGG | - | chr1_1:49428561-49428580 | None:intergenic | 15.0% |
| !! | CTATATTTATTCTTGATTTA+TGG | + | chr1_1:49428861-49428880 | Msa0025810:intron | 15.0% |
| !!! | TTTACGATTTTAAATATTCT+TGG | + | chr1_1:49429066-49429085 | Msa0025810:intron | 15.0% |
| !! | TTTGTTACAAAATGATTTAA+AGG | + | chr1_1:49429201-49429220 | Msa0025810:intron | 15.0% |
| !! | TTGTTACAAAATGATTTAAA+GGG | + | chr1_1:49429202-49429221 | Msa0025810:intron | 15.0% |
| !!! | AATTTAGAGTAATAAATTAC+GGG | - | chr1_1:49429363-49429382 | None:intergenic | 15.0% |
| !! | GAAAGAATATAAATACAAAA+TGG | - | chr1_1:49429982-49430001 | None:intergenic | 15.0% |
| !!! | CTATTTTATCATATTCTTTT+AGG | + | chr1_1:49430238-49430257 | Msa0025810:intron | 15.0% |
| !!! | CTTATATTTTATTATTACTG+AGG | - | chr1_1:49431122-49431141 | None:intergenic | 15.0% |
| !! | TGATAAAATATGTATTTAAG+GGG | + | chr1_1:49431463-49431482 | Msa0025810:intron | 15.0% |
| !! | ATAATGTAATATTCAATAGT+GGG | - | chr1_1:49431631-49431650 | None:intergenic | 15.0% |
| !! | AATAATGTAATATTCAATAG+TGG | - | chr1_1:49431632-49431651 | None:intergenic | 15.0% |
| !!! | AATTTCCTATTTTGTTTTTA+TGG | + | chr1_1:49432240-49432259 | Msa0025810:intron | 15.0% |
| !! | AAAATCCATAAAAACAAAAT+AGG | - | chr1_1:49432248-49432267 | None:intergenic | 15.0% |
| !! | ACAAATAGTAATTACTTATA+GGG | - | chr1_1:49432368-49432387 | None:intergenic | 15.0% |
| !! | TACAAATAGTAATTACTTAT+AGG | - | chr1_1:49432369-49432388 | None:intergenic | 15.0% |
| !!! | AAAATTTAGAATTATAGGTA+TGG | - | chr1_1:49432712-49432731 | None:intergenic | 15.0% |
| !! | TTAATTAATCAATTATGGAT+TGG | + | chr1_1:49427141-49427160 | Msa0025810:intron | 15.0% |
| !! | TGATGTCATAATATAAATTA+TGG | + | chr1_1:49427185-49427204 | Msa0025810:intron | 15.0% |
| !! | TTTAAGGAAAATATTATGTA+GGG | - | chr1_1:49433386-49433405 | None:intergenic | 15.0% |
| !!! | TTTTAAGGAAAATATTATGT+AGG | - | chr1_1:49433387-49433406 | None:intergenic | 15.0% |
| !! | AAAAAAACATTTGCTTATAA+AGG | - | chr1_1:49433443-49433462 | None:intergenic | 15.0% |
| !! | AAATTTACTTGTAGTTAAAT+AGG | + | chr1_1:49433862-49433881 | Msa0025810:intron | 15.0% |
| !! | ATTATTAATCTATAACAGTA+AGG | + | chr1_1:49434400-49434419 | Msa0025810:intron | 15.0% |
| !! | ATTGATTGATTATTATTGAT+AGG | - | chr1_1:49421783-49421802 | None:intergenic | 15.0% |
| !! | TCAACTATAATTATTAAAGA+TGG | + | chr1_1:49421982-49422001 | Msa0025810:intron | 15.0% |
| !! | TTAACATTGACATAAAAAAA+GGG | - | chr1_1:49435860-49435879 | None:intergenic | 15.0% |
| !! | TTTAACATTGACATAAAAAA+AGG | - | chr1_1:49435861-49435880 | None:intergenic | 15.0% |
| !!! | AACAATATGATTGTTTTTTT+AGG | - | chr1_1:49436016-49436035 | None:intergenic | 15.0% |
| !! | ATATTGTTGAATTGTAAAAT+CGG | + | chr1_1:49436028-49436047 | Msa0025810:intron | 15.0% |
| !!! | ATTGATGATACAATTATAAT+GGG | - | chr1_1:49436362-49436381 | None:intergenic | 15.0% |
| !!! | TGTTAAAGTTAACTTTAAAA+AGG | - | chr1_1:49436661-49436680 | None:intergenic | 15.0% |
| !!! | TTTTAAAGTTAACTTTAACA+AGG | + | chr1_1:49436661-49436680 | Msa0025810:intron | 15.0% |
| !! | TTCGTTAGAAAAATACAAAA+GGG | + | chr1_1:49416330-49416349 | Msa0025810:CDS | 20.0% |
| !! | AAATGAAAAGGTTTATGATT+GGG | + | chr1_1:49416436-49416455 | Msa0025810:CDS | 20.0% |
| !! | GAAAAATCTAAACATTATGA+TGG | + | chr1_1:49416912-49416931 | Msa0025810:intron | 20.0% |
| !!! | ACAACAATAATTTTCAACTA+GGG | - | chr1_1:49418057-49418076 | None:intergenic | 20.0% |
| !!! | TACAACAATAATTTTCAACT+AGG | - | chr1_1:49418056-49418075 | None:intergenic | 20.0% |
| !! | TTCATGTTTGTAAATTCAAT+TGG | + | chr1_1:49417405-49417424 | Msa0025810:intron | 20.0% |
| !! | ATAAAGCAAAAGAAAAAGAA+AGG | + | chr1_1:49417639-49417658 | Msa0025810:intron | 20.0% |
| !! | TATTGGAGTTATATATGAAA+TGG | + | chr1_1:49417748-49417767 | Msa0025810:intron | 20.0% |
| !! | TTCATGTTTGTAAATTCAAT+TGG | - | chr1_1:49417405-49417424 | None:intergenic | 20.0% |
| !!! | TACAACAATAATTTTCAACT+AGG | + | chr1_1:49418056-49418075 | Msa0025810:intron | 20.0% |
| !!! | ACAACAATAATTTTCAACTA+GGG | + | chr1_1:49418057-49418076 | Msa0025810:intron | 20.0% |
| !!! | TATATCAATTTTTTGGTCAT+AGG | + | chr1_1:49418085-49418104 | Msa0025810:intron | 20.0% |
| !!! | ATATCAATTTTTTGGTCATA+GGG | + | chr1_1:49418086-49418105 | Msa0025810:intron | 20.0% |
| !!! | TTTTGAGTGGAAAAAAAAAA+AGG | + | chr1_1:49418222-49418241 | Msa0025810:intron | 20.0% |
| !! | AATAACTGTGAAATAGAAAA+CGG | + | chr1_1:49418253-49418272 | Msa0025810:intron | 20.0% |
| !!! | GAGTAACTCTTATTTATATA+AGG | + | chr1_1:49418706-49418725 | Msa0025810:intron | 20.0% |
| !!! | TAACTCTTATTTATATAAGG+TGG | + | chr1_1:49418709-49418728 | Msa0025810:intron | 20.0% |
| !!! | AACTCTTATTTATATAAGGT+GGG | + | chr1_1:49418710-49418729 | Msa0025810:intron | 20.0% |
| !! | TATAATTCTAATCTCATATC+AGG | + | chr1_1:49418876-49418895 | Msa0025810:intron | 20.0% |
| !! | TTGTTTCGTAATAAGATTTA+TGG | + | chr1_1:49419381-49419400 | Msa0025810:intron | 20.0% |
| !! | ATTGAAAATGAAAAGAGAAA+AGG | - | chr1_1:49419521-49419540 | None:intergenic | 20.0% |
| !!! | TCATTCTTTTATATGTTACA+TGG | + | chr1_1:49419551-49419570 | Msa0025810:intron | 20.0% |
| !!! | CATTCTTTTATATGTTACAT+GGG | + | chr1_1:49419552-49419571 | Msa0025810:intron | 20.0% |
| !! | AGAAATCAATGGTTAAAATT+TGG | - | chr1_1:49419648-49419667 | None:intergenic | 20.0% |
| !!! | ACAATCATATGCTTTTAAAA+TGG | + | chr1_1:49420048-49420067 | Msa0025810:intron | 20.0% |
| !! | TTATCAAGATTTAATTGTCT+TGG | + | chr1_1:49420498-49420517 | Msa0025810:intron | 20.0% |
| !! | AGTCATCATACAAAATATTA+AGG | + | chr1_1:49420732-49420751 | Msa0025810:intron | 20.0% |
| !! | GATATAATGACATACTTTAT+AGG | + | chr1_1:49420833-49420852 | Msa0025810:intron | 20.0% |
| !!! | AAAATTGACTTGTAAGTTTA+TGG | + | chr1_1:49421299-49421318 | Msa0025810:intron | 20.0% |
| !! | TCTAAGAACAATATTATACA+GGG | - | chr1_1:49421397-49421416 | None:intergenic | 20.0% |
| !! | TAACATATGCTTATAAATGA+GGG | - | chr1_1:49421450-49421469 | None:intergenic | 20.0% |
| !! | TTAACATATGCTTATAAATG+AGG | - | chr1_1:49421451-49421470 | None:intergenic | 20.0% |
| !!! | ACAATATATTTGACTTGAAT+TGG | - | chr1_1:49421476-49421495 | None:intergenic | 20.0% |
| !! | ATAATTAATATCTAAGAGTG+TGG | - | chr1_1:49421658-49421677 | None:intergenic | 20.0% |
| !! | GAATTTAAAAGGTTTATCAT+TGG | + | chr1_1:49422136-49422155 | Msa0025810:CDS | 20.0% |
| !!! | AGTGTTTTAAATAGTATTCA+CGG | + | chr1_1:49422491-49422510 | Msa0025810:intron | 20.0% |
| !!! | TAAATGGCAATTTTTGTTTT+TGG | - | chr1_1:49422999-49423018 | None:intergenic | 20.0% |
| !! | AAATAGAATATAATTTGGGA+GGG | - | chr1_1:49423159-49423178 | None:intergenic | 20.0% |
| !! | AAAATAGAATATAATTTGGG+AGG | - | chr1_1:49423160-49423179 | None:intergenic | 20.0% |
| !!! | TGTGTTGTATTTTAAATTTC+TGG | + | chr1_1:49423290-49423309 | Msa0025810:intron | 20.0% |
| !! | TTAGAATTTCAATTTCAATC+TGG | + | chr1_1:49423321-49423340 | Msa0025810:intron | 20.0% |
| !! | ACTTTAACAAATATCTTTGT+TGG | + | chr1_1:49423727-49423746 | Msa0025810:intron | 20.0% |
| !!! | AAATTGAAAAAGTCTTATAC+AGG | + | chr1_1:49423774-49423793 | Msa0025810:intron | 20.0% |
| !!! | AATTGAAAAAGTCTTATACA+GGG | + | chr1_1:49423775-49423794 | Msa0025810:intron | 20.0% |
| !!! | TTAGTTTGCAAAACATAAAA+AGG | + | chr1_1:49424144-49424163 | Msa0025810:intron | 20.0% |
| !! | CCAAAAAGTTGTTATATTAA+GGG | - | chr1_1:49424226-49424245 | None:intergenic | 20.0% |
| !! | ACCAAAAAGTTGTTATATTA+AGG | - | chr1_1:49424227-49424246 | None:intergenic | 20.0% |
| !!! | TATAACAACTTTTTGGTTAA+AGG | + | chr1_1:49424230-49424249 | Msa0025810:intron | 20.0% |
| !!! | ATAACAACTTTTTGGTTAAA+GGG | + | chr1_1:49424231-49424250 | Msa0025810:intron | 20.0% |
| !! | ATAAATGAATGCAATGTATA+GGG | + | chr1_1:49424284-49424303 | Msa0025810:intron | 20.0% |
| !!! | TTAATTGAAGAGATGTTTTT+GGG | - | chr1_1:49424346-49424365 | None:intergenic | 20.0% |
| !!! | ATTAATTGAAGAGATGTTTT+TGG | - | chr1_1:49424347-49424366 | None:intergenic | 20.0% |
| !! | AAGATCAAAATAAATCACAT+AGG | - | chr1_1:49424373-49424392 | None:intergenic | 20.0% |
| !! | ATACATATAATATTAGACCA+TGG | - | chr1_1:49424400-49424419 | None:intergenic | 20.0% |
| !!! | ATGTATGTAAGTTTATTTTG+AGG | - | chr1_1:49424559-49424578 | None:intergenic | 20.0% |
| !! | TTCGTTAGAAAAATACAAAA+GGG | + | chr1_1:49416330-49416349 | Msa0025810:CDS | 20.0% |
| !! | AAATGAAAAGGTTTATGATT+GGG | + | chr1_1:49416436-49416455 | Msa0025810:CDS | 20.0% |
| !! | GAAATTAGAAATAACATTGA+AGG | + | chr1_1:49425364-49425383 | Msa0025810:intron | 20.0% |
| !! | AGATAAGAGTTATGTAATAA+AGG | - | chr1_1:49425698-49425717 | None:intergenic | 20.0% |
| !!! | GAGGGTTTTTTTTTTTTTTT+TGG | - | chr1_1:49425839-49425858 | None:intergenic | 20.0% |
| !!! | CTTTGTTTTTTTTCTTTTAG+GGG | + | chr1_1:49426026-49426045 | Msa0025810:intron | 20.0% |
| !!! | CTTATCAAACTTTAACTTTT+AGG | - | chr1_1:49426086-49426105 | None:intergenic | 20.0% |
| !!! | GAATTATTTTAGACTAAACA+AGG | - | chr1_1:49426185-49426204 | None:intergenic | 20.0% |
| !! | TTGTTTCGTAATAAGATTTA+TGG | + | chr1_1:49419381-49419400 | Msa0025810:intron | 20.0% |
| !!! | TTTCTTCATATGTTTTGTAA+CGG | + | chr1_1:49426368-49426387 | Msa0025810:intron | 20.0% |
| !!! | TTACTATTGTCATTTGTTAT+CGG | + | chr1_1:49426419-49426438 | Msa0025810:intron | 20.0% |
| !!! | TTTAGTTTAGAGATTGAAAA+TGG | - | chr1_1:49426457-49426476 | None:intergenic | 20.0% |
| !! | TGTATATTACAATTGAAAGA+TGG | + | chr1_1:49426526-49426545 | Msa0025810:intron | 20.0% |
| !! | GTATATTACAATTGAAAGAT+GGG | + | chr1_1:49426527-49426546 | Msa0025810:intron | 20.0% |
| !! | CTATATATATTGGATACAAA+TGG | - | chr1_1:49420412-49420431 | None:intergenic | 20.0% |
| !! | TGTATCCAATATATATAGAT+TGG | + | chr1_1:49426621-49426640 | Msa0025810:intron | 20.0% |
| !!! | TATTTTAACACTATCTTTAG+AGG | + | chr1_1:49426865-49426884 | Msa0025810:intron | 20.0% |
| !!! | GATTTCTTAAAATTTGAGTT+AGG | + | chr1_1:49426910-49426929 | Msa0025810:intron | 20.0% |
| !!! | TCTGAACATATATTTTTAAG+TGG | - | chr1_1:49426980-49426999 | None:intergenic | 20.0% |
| !! | AGTTAATGAATATATGTGAT+TGG | + | chr1_1:49427230-49427249 | Msa0025810:intron | 20.0% |
| !! | GTTAATGAATATATGTGATT+GGG | + | chr1_1:49427231-49427250 | Msa0025810:intron | 20.0% |
| !! | ATTTAATAACAGATGATTCA+CGG | - | chr1_1:49427611-49427630 | None:intergenic | 20.0% |
| !!! | AAGCAATTGATTCTTAAAAT+TGG | + | chr1_1:49427793-49427812 | Msa0025810:intron | 20.0% |
| !! | ATATCTTATTATTTGACAAC+AGG | - | chr1_1:49427866-49427885 | None:intergenic | 20.0% |
| !! | TAATATTTACCAGATAATTG+GGG | - | chr1_1:49428487-49428506 | None:intergenic | 20.0% |
| !! | CTAATATTTACCAGATAATT+GGG | - | chr1_1:49428488-49428507 | None:intergenic | 20.0% |
| !! | ACTAATATTTACCAGATAAT+TGG | - | chr1_1:49428489-49428508 | None:intergenic | 20.0% |
| !!! | AAATCTTCTAAAAGTACTTT+GGG | - | chr1_1:49428525-49428544 | None:intergenic | 20.0% |
| !! | AATGATCAATTAGTAAACTT+TGG | - | chr1_1:49429150-49429169 | None:intergenic | 20.0% |
| !!! | TACTAATTGATCATTCTTTT+AGG | + | chr1_1:49429155-49429174 | Msa0025810:intron | 20.0% |
| !! | ACACATTATTAGATAGTTAA+TGG | - | chr1_1:49429398-49429417 | None:intergenic | 20.0% |
| !! | TATATAAGAATTCAGATGTA+AGG | - | chr1_1:49429616-49429635 | None:intergenic | 20.0% |
| !! | ATATTCTTTCGAATTTATAG+TGG | + | chr1_1:49429992-49430011 | Msa0025810:intron | 20.0% |
| !! | TATTCTTTCGAATTTATAGT+GGG | + | chr1_1:49429993-49430012 | Msa0025810:intron | 20.0% |
| !! | TGAATAGATTAGCATTATAT+TGG | + | chr1_1:49430327-49430346 | Msa0025810:intron | 20.0% |
| !!! | GACATAAGTATAAACATTTT+AGG | - | chr1_1:49430405-49430424 | None:intergenic | 20.0% |
| !! | CTTACTTATTATTATCCTTA+AGG | + | chr1_1:49430491-49430510 | Msa0025810:intron | 20.0% |
| !! | ATTTGTTTATGAGATATAGT+TGG | - | chr1_1:49430978-49430997 | None:intergenic | 20.0% |
| !!! | TTGCTATTCTTTAATACTTA+TGG | + | chr1_1:49431070-49431089 | Msa0025810:intron | 20.0% |
| !! | CACATTTGAGAAAAAAAATT+AGG | - | chr1_1:49431170-49431189 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTCTCAAATGTG+TGG | + | chr1_1:49431170-49431189 | Msa0025810:intron | 20.0% |
| !!! | TGGAATTTTAATTGTGAAAA+AGG | + | chr1_1:49431362-49431381 | Msa0025810:intron | 20.0% |
| !! | TGCAAAATTATTAACATAAG+TGG | - | chr1_1:49431593-49431612 | None:intergenic | 20.0% |
| !! | ATATATAAACAAGAGTAAGA+GGG | - | chr1_1:49431690-49431709 | None:intergenic | 20.0% |
| !! | TATATATAAACAAGAGTAAG+AGG | - | chr1_1:49431691-49431710 | None:intergenic | 20.0% |
| !!! | TACTCTTGTTTATATATATG+TGG | + | chr1_1:49431693-49431712 | Msa0025810:intron | 20.0% |
| !!! | ACTCTTGTTTATATATATGT+GGG | + | chr1_1:49431694-49431713 | Msa0025810:intron | 20.0% |
| !! | ACATATATATAAACAAGAGT+GGG | - | chr1_1:49431694-49431713 | None:intergenic | 20.0% |
| !! | TTACTATGTTAATCCAATTT+GGG | + | chr1_1:49432209-49432228 | Msa0025810:intron | 20.0% |
| !!! | TGTAATTACACTCTTTTAAT+AGG | + | chr1_1:49432338-49432357 | Msa0025810:intron | 20.0% |
| !! | CTATAAAATTGAAAACTCAT+TGG | + | chr1_1:49432411-49432430 | Msa0025810:intron | 20.0% |
| !!! | TGATTAAGTCTACAATATTT+TGG | + | chr1_1:49432487-49432506 | Msa0025810:intron | 20.0% |
| !!! | GATTAAGTCTACAATATTTT+GGG | + | chr1_1:49432488-49432507 | Msa0025810:intron | 20.0% |
| !!! | TATAGCATTTTTAAAATGCT+TGG | + | chr1_1:49432526-49432545 | Msa0025810:intron | 20.0% |
| !!! | ATAGCATTTTTAAAATGCTT+GGG | + | chr1_1:49432527-49432546 | Msa0025810:intron | 20.0% |
| !! | AACTTGTATCTATTAATCTA+TGG | + | chr1_1:49433190-49433209 | Msa0025810:intron | 20.0% |
| !!! | CTAACTTAATTTTACAAAAC+TGG | + | chr1_1:49433273-49433292 | Msa0025810:intron | 20.0% |
| !!! | ACATTTTAAATATGAAGAAG+TGG | + | chr1_1:49433338-49433357 | Msa0025810:intron | 20.0% |
| !! | AATAATAATATCTAAGTGTG+TGG | - | chr1_1:49434386-49434405 | None:intergenic | 20.0% |
| !!! | ATTTCTTATTTTTCAAAACG+CGG | - | chr1_1:49434460-49434479 | None:intergenic | 20.0% |
| !! | GAAATTAAAAGGTTTATCAT+TGG | + | chr1_1:49434829-49434848 | Msa0025810:CDS | 20.0% |
| !!! | CTTTCTTTTTTTTTGTCAAT+TGG | + | chr1_1:49435168-49435187 | Msa0025810:intron | 20.0% |
| !! | AAAAAGGTGAATTTCTAAAT+CGG | - | chr1_1:49435194-49435213 | None:intergenic | 20.0% |
| !! | GAAACATTTCTTCAAATTAA+TGG | + | chr1_1:49435324-49435343 | Msa0025810:intron | 20.0% |
| !!! | AGTGTTTTAAATCTTAGTTA+AGG | + | chr1_1:49435349-49435368 | Msa0025810:intron | 20.0% |
| !! | AATATCAGATCTTCAAATAA+AGG | - | chr1_1:49435489-49435508 | None:intergenic | 20.0% |
| !! | TTTCAAAGTATATGAAATCA+TGG | - | chr1_1:49435547-49435566 | None:intergenic | 20.0% |
| !! | TTAGAAAAGTCATTGTTAAA+CGG | - | chr1_1:49435677-49435696 | None:intergenic | 20.0% |
| !! | AGTGTGTTAAAATACAAATA+TGG | - | chr1_1:49435767-49435786 | None:intergenic | 20.0% |
| !! | GAAATAAGAAAAATAGTTTG+TGG | - | chr1_1:49435793-49435812 | None:intergenic | 20.0% |
| !!! | AAATTTTTGCAAAAGTAGAT+CGG | + | chr1_1:49435948-49435967 | Msa0025810:intron | 20.0% |
| !!! | TAGGAATAGTAGAAATTTTT+CGG | + | chr1_1:49436154-49436173 | Msa0025810:intron | 20.0% |
| !!! | CATTGATGATACAATTATAA+TGG | - | chr1_1:49436363-49436382 | None:intergenic | 20.0% |
| !!! | ATGACTAAAACATTTGATTT+AGG | - | chr1_1:49436438-49436457 | None:intergenic | 20.0% |
| !!! | AATTTCTAAATTTTTGAGCT+TGG | - | chr1_1:49437399-49437418 | None:intergenic | 20.0% |
| !!! | TGATTATTGTTGATAGAATT+AGG | - | chr1_1:49437440-49437459 | None:intergenic | 20.0% |
| !! | CTTTTGTATTTTTCTAACGA+AGG | - | chr1_1:49416331-49416350 | None:intergenic | 25.0% |
| ! | CTTCGTTAGAAAAATACAAA+AGG | + | chr1_1:49416329-49416348 | Msa0025810:CDS | 25.0% |
| ! | GAAATGAAAAGGTTTATGAT+TGG | + | chr1_1:49416435-49416454 | Msa0025810:CDS | 25.0% |
| !! | CTTTTGTCTATTGTGAATTT+TGG | + | chr1_1:49416800-49416819 | Msa0025810:intron | 25.0% |
| ! | AAGTAGTAATCTTATGTATG+CGG | + | chr1_1:49416876-49416895 | Msa0025810:intron | 25.0% |
| ! | ACAATTAATGAAGGAAACAA+GGG | - | chr1_1:49417125-49417144 | None:intergenic | 25.0% |
| ! | TACAATTAATGAAGGAAACA+AGG | - | chr1_1:49417126-49417145 | None:intergenic | 25.0% |
| !!! | TATCGATTTTTTTGGTCATA+GGG | - | chr1_1:49417219-49417238 | None:intergenic | 25.0% |
| !!! | ATATCGATTTTTTTGGTCAT+AGG | - | chr1_1:49417220-49417239 | None:intergenic | 25.0% |
| !! | CAACAATAATTTTCAACTAG+GGG | - | chr1_1:49418058-49418077 | None:intergenic | 25.0% |
| ! | ATTTACTTCACCAAATGTTA+AGG | - | chr1_1:49417621-49417640 | None:intergenic | 25.0% |
| ! | TCCACAAGAAAATTAACTAT+TGG | + | chr1_1:49417731-49417750 | Msa0025810:intron | 25.0% |
| !! | TCCAATAGTTAATTTTCTTG+TGG | - | chr1_1:49417735-49417754 | None:intergenic | 25.0% |
| !! | CATTTTATATATGGAGCAAA+GGG | + | chr1_1:49417871-49417890 | Msa0025810:intron | 25.0% |
| !! | CAACAATAATTTTCAACTAG+GGG | + | chr1_1:49418058-49418077 | Msa0025810:intron | 25.0% |
| !!! | GGGCAAATATATCAATTTTT+TGG | + | chr1_1:49418078-49418097 | Msa0025810:intron | 25.0% |
| !!! | TATCAATTTTTTGGTCATAG+GGG | + | chr1_1:49418087-49418106 | Msa0025810:intron | 25.0% |
| !! | AATTTGCTTATAAATGTGAC+CGG | - | chr1_1:49418571-49418590 | None:intergenic | 25.0% |
| ! | AATAATTGTCTGATCTTCAT+TGG | + | chr1_1:49418819-49418838 | Msa0025810:intron | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | + | chr1_1:49419131-49419150 | Msa0025810:intron | 25.0% |
| !!! | ATTTTGAGAAATATACGAAG+TGG | - | chr1_1:49419230-49419249 | None:intergenic | 25.0% |
| ! | ACTTCGTATATTTCTCAAAA+TGG | + | chr1_1:49419229-49419248 | Msa0025810:intron | 25.0% |
| !!! | GATTTATTTTAGACTAGGTA+AGG | - | chr1_1:49419275-49419294 | None:intergenic | 25.0% |
| !!! | GAAAGGATTTATTTTAGACT+AGG | - | chr1_1:49419280-49419299 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTAAAGTAGAGAC+AGG | + | chr1_1:49419586-49419605 | Msa0025810:intron | 25.0% |
| ! | AATGAACAAATATAAGCCTT+CGG | - | chr1_1:49419677-49419696 | None:intergenic | 25.0% |
| ! | GGAATGTAAATTGCAATTAT+AGG | - | chr1_1:49419779-49419798 | None:intergenic | 25.0% |
| ! | ATTAAGAAGAAGAAAAAACG+AGG | - | chr1_1:49419955-49419974 | None:intergenic | 25.0% |
| ! | CAAATAGTAGAAATACAAGA+AGG | - | chr1_1:49420074-49420093 | None:intergenic | 25.0% |
| !! | AAAAATTAATTTGGCACACA+TGG | + | chr1_1:49420130-49420149 | Msa0025810:intron | 25.0% |
| ! | AGAAATCAACGATTAAGATT+TGG | + | chr1_1:49420311-49420330 | Msa0025810:intron | 25.0% |
| ! | TGTATCCAATATATATAGGT+TGG | + | chr1_1:49420414-49420433 | Msa0025810:intron | 25.0% |
| ! | GTATCCAATATATATAGGTT+GGG | + | chr1_1:49420415-49420434 | Msa0025810:intron | 25.0% |
| ! | TATCCAATATATATAGGTTG+GGG | + | chr1_1:49420416-49420435 | Msa0025810:intron | 25.0% |
| !! | TTTTGAATTTCGCTAATTCA+AGG | - | chr1_1:49420551-49420570 | None:intergenic | 25.0% |
| ! | AATACATTGAAAAGTCAAAG+TGG | + | chr1_1:49420570-49420589 | Msa0025810:intron | 25.0% |
| ! | ATACATTGAAAAGTCAAAGT+GGG | + | chr1_1:49420571-49420590 | Msa0025810:intron | 25.0% |
| !!! | AGTAAAGTTTAGTTTTAGAG+CGG | - | chr1_1:49420700-49420719 | None:intergenic | 25.0% |
| !! | AGTCATGAAAATGACTTTTA+TGG | - | chr1_1:49420938-49420957 | None:intergenic | 25.0% |
| ! | CTCAAATACCATCTTAAAAT+TGG | + | chr1_1:49421255-49421274 | Msa0025810:intron | 25.0% |
| !! | ACATTTTAAATATGGAGAAG+TGG | + | chr1_1:49421349-49421368 | Msa0025810:intron | 25.0% |
| ! | CTAAGAACAATATTATACAG+GGG | - | chr1_1:49421396-49421415 | None:intergenic | 25.0% |
| !! | CTCTAAGAACAATATTATAC+AGG | - | chr1_1:49421398-49421417 | None:intergenic | 25.0% |
| !! | TATTGTCAAAGATTTTACCT+TGG | + | chr1_1:49421490-49421509 | Msa0025810:intron | 25.0% |
| !! | ATTGTCAAAGATTTTACCTT+GGG | + | chr1_1:49421491-49421510 | Msa0025810:intron | 25.0% |
| ! | AAGATCATTCTTTGTGAATA+TGG | - | chr1_1:49421576-49421595 | None:intergenic | 25.0% |
| ! | ATCTTCAAAGTTAATGATAC+TGG | + | chr1_1:49421591-49421610 | Msa0025810:intron | 25.0% |
| !! | TGAAAGTTTCTAAGTTTTTG+AGG | - | chr1_1:49421936-49421955 | None:intergenic | 25.0% |
| !! | AGAATGTTTTGTAATTGTTG+AGG | - | chr1_1:49422262-49422281 | None:intergenic | 25.0% |
| ! | CAATTACAAAACATTCTAGA+TGG | + | chr1_1:49422265-49422284 | Msa0025810:intron | 25.0% |
| ! | ATTTAGTGCTATCTTCTATA+TGG | - | chr1_1:49422301-49422320 | None:intergenic | 25.0% |
| ! | AGATACATGTTCATAACTTA+CGG | + | chr1_1:49422325-49422344 | Msa0025810:intron | 25.0% |
| ! | ATGATACGCTATAAATATGA+TGG | + | chr1_1:49422379-49422398 | Msa0025810:intron | 25.0% |
| !!! | TGTTGTTTGTTTTAAGTTTC+AGG | + | chr1_1:49422652-49422671 | Msa0025810:intron | 25.0% |
| !! | GGGAAATTTTTCTTTTATGA+AGG | - | chr1_1:49422876-49422895 | None:intergenic | 25.0% |
| !! | ACAAAAATTGCCATTTAAAG+TGG | + | chr1_1:49423002-49423021 | Msa0025810:intron | 25.0% |
| !! | TGATTTGTATCCACTTTAAA+TGG | - | chr1_1:49423015-49423034 | None:intergenic | 25.0% |
| ! | AGAATCAAAGTAATAGTCAA+GGG | + | chr1_1:49423060-49423079 | Msa0025810:intron | 25.0% |
| !!! | GTTAGAATTTTTTTACCTCA+TGG | - | chr1_1:49423117-49423136 | None:intergenic | 25.0% |
| !!! | AAAAACTTTTTGGAACTTGA+AGG | + | chr1_1:49423435-49423454 | Msa0025810:intron | 25.0% |
| !!! | AAAACTTTTTGGAACTTGAA+GGG | + | chr1_1:49423436-49423455 | Msa0025810:intron | 25.0% |
| !!! | GTATCAGATTTTAACAGAAA+CGG | + | chr1_1:49423481-49423500 | Msa0025810:intron | 25.0% |
| ! | AGTAAAACTTTACTCTTCAA+AGG | + | chr1_1:49423568-49423587 | Msa0025810:intron | 25.0% |
| ! | CAAAGATACTTTGAATTACA+CGG | - | chr1_1:49423689-49423708 | None:intergenic | 25.0% |
| !!! | CTTTGTTGGTTTGTATTAAT+TGG | + | chr1_1:49423741-49423760 | Msa0025810:intron | 25.0% |
| !! | ATTGAAAAAGTCTTATACAG+GGG | + | chr1_1:49423776-49423795 | Msa0025810:intron | 25.0% |
| ! | ACTTAAGTTCTTTAAGTATG+TGG | + | chr1_1:49424008-49424027 | Msa0025810:intron | 25.0% |
| ! | AAGGAAATCATCATAAAGTA+AGG | + | chr1_1:49424163-49424182 | Msa0025810:intron | 25.0% |
| ! | AAAGTTGTTATATTAAGGGA+GGG | - | chr1_1:49424222-49424241 | None:intergenic | 25.0% |
| ! | AAAAGTTGTTATATTAAGGG+AGG | - | chr1_1:49424223-49424242 | None:intergenic | 25.0% |
| !! | CCCTTAATATAACAACTTTT+TGG | + | chr1_1:49424223-49424242 | Msa0025810:intron | 25.0% |
| ! | TTAATCGACCTAACATATAA+TGG | + | chr1_1:49424260-49424279 | Msa0025810:intron | 25.0% |
| ! | CATTTATGCCATTATATGTT+AGG | - | chr1_1:49424271-49424290 | None:intergenic | 25.0% |
| ! | CATAAATGAATGCAATGTAT+AGG | + | chr1_1:49424283-49424302 | Msa0025810:intron | 25.0% |
| !!! | TTTTAGTTGTATTGTATTGG+TGG | - | chr1_1:49424316-49424335 | None:intergenic | 25.0% |
| !!! | TTATTTTGATCTTATCACCA+TGG | + | chr1_1:49424380-49424399 | Msa0025810:intron | 25.0% |
| ! | GCATGAAAATAAATAAACAC+GGG | - | chr1_1:49424478-49424497 | None:intergenic | 25.0% |
| ! | CGCATGAAAATAAATAAACA+CGG | - | chr1_1:49424479-49424498 | None:intergenic | 25.0% |
| !! | CTTTTGTATTTTTCTAACGA+AGG | - | chr1_1:49416331-49416350 | None:intergenic | 25.0% |
| ! | CTTCGTTAGAAAAATACAAA+AGG | + | chr1_1:49416329-49416348 | Msa0025810:CDS | 25.0% |
| ! | TAAAATGAAGATGTTAGAGA+AGG | + | chr1_1:49424686-49424705 | Msa0025810:intron | 25.0% |
| ! | GAAATGAAAAGGTTTATGAT+TGG | + | chr1_1:49416435-49416454 | Msa0025810:CDS | 25.0% |
| !! | TTTTTGTCTATTGTGCATTT+TGG | + | chr1_1:49425085-49425104 | Msa0025810:intron | 25.0% |
| !!! | GTCAATACACAAATCTTTTT+TGG | + | chr1_1:49425107-49425126 | Msa0025810:intron | 25.0% |
| ! | ATACTCTTGAAGATAAGTAA+TGG | - | chr1_1:49425181-49425200 | None:intergenic | 25.0% |
| ! | ATTACTTATCTTCAAGAGTA+TGG | + | chr1_1:49425180-49425199 | Msa0025810:intron | 25.0% |
| !! | AATTTGAAGCTGAAGAAAAA+TGG | + | chr1_1:49425293-49425312 | Msa0025810:intron | 25.0% |
| ! | ACTCTTATCTACATATAAGA+TGG | + | chr1_1:49425708-49425727 | Msa0025810:intron | 25.0% |
| ! | CTCTTATCTACATATAAGAT+GGG | + | chr1_1:49425709-49425728 | Msa0025810:intron | 25.0% |
| !!! | AAAATAAGATTTGTTGCAGT+CGG | + | chr1_1:49425762-49425781 | Msa0025810:intron | 25.0% |
| !! | TCAGCTAATGATATTTTCAT+CGG | + | chr1_1:49426109-49426128 | Msa0025810:intron | 25.0% |
| !! | TCATTCTTTTCAATGATACA+TGG | + | chr1_1:49426480-49426499 | Msa0025810:intron | 25.0% |
| !! | CATTCTTTTCAATGATACAT+GGG | + | chr1_1:49426481-49426500 | Msa0025810:intron | 25.0% |
| !!! | CAAAGTTTTTCAAAGTATCT+TGG | + | chr1_1:49426575-49426594 | Msa0025810:intron | 25.0% |
| !!! | TTTTTCAAAGTATCTTGGAA+GGG | + | chr1_1:49426580-49426599 | Msa0025810:intron | 25.0% |
| ! | CAATATATATAGATTGGTGT+GGG | + | chr1_1:49426627-49426646 | Msa0025810:intron | 25.0% |
| !!! | TCTTTAGAGGTCAATTTTAT+AGG | + | chr1_1:49426878-49426897 | Msa0025810:intron | 25.0% |
| ! | ATGACGTTTAAATAGCTAAA+CGG | - | chr1_1:49427328-49427347 | None:intergenic | 25.0% |
| ! | GTTAATTATTCTGAACATCA+TGG | + | chr1_1:49427359-49427378 | Msa0025810:intron | 25.0% |
| ! | AACCATAACATGTATCTATT+TGG | - | chr1_1:49427578-49427597 | None:intergenic | 25.0% |
| ! | TAGATACATGTTATGGTTAT+AGG | + | chr1_1:49427580-49427599 | Msa0025810:intron | 25.0% |
| ! | TGATTCATGTTTCATGTATT+AGG | - | chr1_1:49427714-49427733 | None:intergenic | 25.0% |
| !!! | AAGAATCAATTGCTTTTTCA+TGG | - | chr1_1:49427788-49427807 | None:intergenic | 25.0% |
| !! | GATCTGCTAATTTGATTTAT+GGG | - | chr1_1:49427956-49427975 | None:intergenic | 25.0% |
| !! | TAAGAAATCAGTCTCAATTT+TGG | + | chr1_1:49427992-49428011 | Msa0025810:intron | 25.0% |
| ! | ACGACAAATCTAAGAAATTT+GGG | - | chr1_1:49428031-49428050 | None:intergenic | 25.0% |
| ! | AACGACAAATCTAAGAAATT+TGG | - | chr1_1:49428032-49428051 | None:intergenic | 25.0% |
| !!! | CAAATCTTCTAAAAGTACTT+TGG | - | chr1_1:49428526-49428545 | None:intergenic | 25.0% |
| !! | GACAAGACAAATAATTTTGA+GGG | - | chr1_1:49428820-49428839 | None:intergenic | 25.0% |
| !! | TGACAAGACAAATAATTTTG+AGG | - | chr1_1:49428821-49428840 | None:intergenic | 25.0% |
| ! | ACAGTTTAAGCTCAAATATT+GGG | - | chr1_1:49428926-49428945 | None:intergenic | 25.0% |
| ! | AACAGTTTAAGCTCAAATAT+TGG | - | chr1_1:49428927-49428946 | None:intergenic | 25.0% |
| ! | TACTATTGTGAATTTACAGA+AGG | + | chr1_1:49429000-49429019 | Msa0025810:intron | 25.0% |
| ! | TCTTGTCGCAATTAAATATT+TGG | + | chr1_1:49429417-49429436 | Msa0025810:intron | 25.0% |
| ! | TTAACAGATAAACAACAAAG+AGG | - | chr1_1:49429539-49429558 | None:intergenic | 25.0% |
| ! | AAACAGCTTATTAAGAATTG+AGG | + | chr1_1:49429568-49429587 | Msa0025810:intron | 25.0% |
| ! | TAATTGCTTATTCTCTATTG+AGG | + | chr1_1:49429679-49429698 | Msa0025810:intron | 25.0% |
| ! | AAATAAATCACAACTTACCT+CGG | - | chr1_1:49429793-49429812 | None:intergenic | 25.0% |
| ! | AAAGGATTTCACTTCTATAT+AGG | - | chr1_1:49429902-49429921 | None:intergenic | 25.0% |
| !! | TTATTCTAAGAGTTCTATTC+TGG | + | chr1_1:49430030-49430049 | Msa0025810:intron | 25.0% |
| ! | TTAATAACAACATACCGATA+GGG | - | chr1_1:49430364-49430383 | None:intergenic | 25.0% |
| ! | ATTAATAACAACATACCGAT+AGG | - | chr1_1:49430365-49430384 | None:intergenic | 25.0% |
| ! | ACTTATTGTAATGTCATTCA+AGG | - | chr1_1:49430518-49430537 | None:intergenic | 25.0% |
| !! | TTAACATAATCATCCTTTTG+TGG | + | chr1_1:49430872-49430891 | Msa0025810:intron | 25.0% |
| !! | TAACATAATCATCCTTTTGT+GGG | + | chr1_1:49430873-49430892 | Msa0025810:intron | 25.0% |
| !! | TAAACTATTTTACCCACAAA+AGG | - | chr1_1:49430888-49430907 | None:intergenic | 25.0% |
| !! | ATGATATTTTCTTCACTTAG+TGG | - | chr1_1:49430922-49430941 | None:intergenic | 25.0% |
| ! | TATTGTAGAGACTTATATTG+AGG | + | chr1_1:49431032-49431051 | Msa0025810:intron | 25.0% |
| !! | ATATTCTGCATTTGGAATTA+AGG | - | chr1_1:49431430-49431449 | None:intergenic | 25.0% |
| ! | AGATATCAATATTCTGCATT+TGG | - | chr1_1:49431438-49431457 | None:intergenic | 25.0% |
| ! | ATCAGAATTATTAACACAAG+TGG | - | chr1_1:49431510-49431529 | None:intergenic | 25.0% |
| ! | CACATATATATAAACAAGAG+TGG | - | chr1_1:49431695-49431714 | None:intergenic | 25.0% |
| ! | ATTTATGACCTCATAAAATG+TGG | - | chr1_1:49432042-49432061 | None:intergenic | 25.0% |
| !!! | TTTTGTTATTGACATTCTAG+TGG | + | chr1_1:49432151-49432170 | Msa0025810:intron | 25.0% |
| !! | GTAACTTAGTTTGAAGAAAA+AGG | - | chr1_1:49432193-49432212 | None:intergenic | 25.0% |
| ! | GTTACTATGTTAATCCAATT+TGG | + | chr1_1:49432208-49432227 | Msa0025810:intron | 25.0% |
| ! | TACTATGTTAATCCAATTTG+GGG | + | chr1_1:49432210-49432229 | Msa0025810:intron | 25.0% |
| ! | TTACTATTTGTATACCTATG+TGG | + | chr1_1:49432377-49432396 | Msa0025810:intron | 25.0% |
| !!! | AGTTGATGAATATATGTGAT+TGG | + | chr1_1:49432903-49432922 | Msa0025810:intron | 25.0% |
| !! | GTTGATGAATATATGTGATT+GGG | + | chr1_1:49432904-49432923 | Msa0025810:intron | 25.0% |
| ! | ATGACGTTTAAATAGCTAAA+CGG | - | chr1_1:49427328-49427347 | None:intergenic | 25.0% |
| ! | GTTAATTATTCTGAACATCA+TGG | + | chr1_1:49427359-49427378 | Msa0025810:intron | 25.0% |
| !! | GAATTTTGTACCTTTGAATT+AGG | - | chr1_1:49433138-49433157 | None:intergenic | 25.0% |
| !! | ACCATCTTAAAATTTGAGTT+TGG | + | chr1_1:49433249-49433268 | Msa0025810:intron | 25.0% |
| !!! | ACCAAACTCAAATTTTAAGA+TGG | - | chr1_1:49433253-49433272 | None:intergenic | 25.0% |
| ! | AAACATTTGCTTATAAAGGA+GGG | - | chr1_1:49433439-49433458 | None:intergenic | 25.0% |
| ! | AAAACATTTGCTTATAAAGG+AGG | - | chr1_1:49433440-49433459 | None:intergenic | 25.0% |
| ! | AAAAGCCTGTTTAGTTAAAT+AGG | + | chr1_1:49433650-49433669 | Msa0025810:intron | 25.0% |
| ! | ATAACAACAAAGCCTATTAA+GGG | - | chr1_1:49433813-49433832 | None:intergenic | 25.0% |
| ! | TATAACAACAAAGCCTATTA+AGG | - | chr1_1:49433814-49433833 | None:intergenic | 25.0% |
| !!! | TTAATAGGCTTTGTTGTTAT+AGG | + | chr1_1:49433813-49433832 | Msa0025810:intron | 25.0% |
| !!! | AGTTAAATAGGCTTTTAAGT+AGG | + | chr1_1:49433874-49433893 | Msa0025810:intron | 25.0% |
| ! | TGATGACCTTAATATAAAGT+AGG | + | chr1_1:49433941-49433960 | Msa0025810:intron | 25.0% |
| ! | CATTTGCTTATAAATGGTAT+TGG | - | chr1_1:49434142-49434161 | None:intergenic | 25.0% |
| ! | TCTCAACATTTGCTTATAAA+TGG | - | chr1_1:49434148-49434167 | None:intergenic | 25.0% |
| ! | GTACATAAATTAAAAACCCA+AGG | - | chr1_1:49434235-49434254 | None:intergenic | 25.0% |
| ! | ATCTTCAAAGTTAATGATAC+TGG | + | chr1_1:49421591-49421610 | Msa0025810:intron | 25.0% |
| !!! | TTAGAAATTCACCTTTTTCA+AGG | + | chr1_1:49435196-49435215 | Msa0025810:intron | 25.0% |
| ! | ACATTGCATAATATATGTAG+GGG | - | chr1_1:49435254-49435273 | None:intergenic | 25.0% |
| ! | GACATTGCATAATATATGTA+GGG | - | chr1_1:49435255-49435274 | None:intergenic | 25.0% |
| ! | ATTTGAAGATCTGATATTCA+TGG | + | chr1_1:49435491-49435510 | Msa0025810:intron | 25.0% |
| ! | GAAAATAAGTACAAGACATA+AGG | - | chr1_1:49435588-49435607 | None:intergenic | 25.0% |
| ! | ACATTGCTTTACTAGTAAAA+TGG | - | chr1_1:49435829-49435848 | None:intergenic | 25.0% |
| ! | TTAAATGACACGATTATGAT+GGG | + | chr1_1:49435876-49435895 | Msa0025810:intron | 25.0% |
| ! | AACATGCAAGCAATAAATAT+CGG | + | chr1_1:49435915-49435934 | Msa0025810:intron | 25.0% |
| !!! | CTCAAGCTTTTTTTACTTTT+GGG | - | chr1_1:49436097-49436116 | None:intergenic | 25.0% |
| !!! | TCTCAAGCTTTTTTTACTTT+TGG | - | chr1_1:49436098-49436117 | None:intergenic | 25.0% |
| !! | ATTTTCACAAAAATAGGTAG+TGG | - | chr1_1:49436259-49436278 | None:intergenic | 25.0% |
| !!! | TTGATTTAGGAAGTTTTGAA+GGG | - | chr1_1:49436425-49436444 | None:intergenic | 25.0% |
| !!! | TTTGATTTAGGAAGTTTTGA+AGG | - | chr1_1:49436426-49436445 | None:intergenic | 25.0% |
| !! | CCAACAAAAGAATTTGAAAT+GGG | - | chr1_1:49436533-49436552 | None:intergenic | 25.0% |
| ! | TCCAACAAAAGAATTTGAAA+TGG | - | chr1_1:49436534-49436553 | None:intergenic | 25.0% |
| !! | TGCACATTAACAATAAGTTT+TGG | - | chr1_1:49436567-49436586 | None:intergenic | 25.0% |
| ! | AATTTATGATGCTGAAAAAC+GGG | - | chr1_1:49436608-49436627 | None:intergenic | 25.0% |
| ! | CAATTTATGATGCTGAAAAA+CGG | - | chr1_1:49436609-49436628 | None:intergenic | 25.0% |
| ! | TTTGAAAATACCTGACAATA+GGG | - | chr1_1:49436746-49436765 | None:intergenic | 25.0% |
| ! | TTTCTTATTGCATTCAAAGT+CGG | - | chr1_1:49436775-49436794 | None:intergenic | 25.0% |
| ! | TTGACTTACATTTATTAGGT+GGG | - | chr1_1:49436805-49436824 | None:intergenic | 25.0% |
| ! | TCTCTTGACTTACATTTATT+AGG | - | chr1_1:49436809-49436828 | None:intergenic | 25.0% |
| !! | AATGTGTCTTTTAATGAGTT+TGG | - | chr1_1:49436952-49436971 | None:intergenic | 25.0% |
| ! | TAACTCAAAAAATATACTCG+TGG | + | chr1_1:49437075-49437094 | Msa0025810:intron | 25.0% |
| ! | TATGACTATACATTAACAGT+AGG | + | chr1_1:49437158-49437177 | Msa0025810:intron | 25.0% |
| ! | ATGACTATACATTAACAGTA+GGG | + | chr1_1:49437159-49437178 | Msa0025810:intron | 25.0% |
| ! | TCTTCATTCAAGTAGCTTTT+GGG | - | chr1_1:49416372-49416391 | None:intergenic | 30.0% |
| ! | ATCTTCATTCAAGTAGCTTT+TGG | - | chr1_1:49416373-49416392 | None:intergenic | 30.0% |
| TTGAATGAAGATGTTAGAGA+AGG | + | chr1_1:49416381-49416400 | Msa0025810:CDS | 30.0% | |
| TCAAAGATGGAGAAATGAAA+AGG | + | chr1_1:49416424-49416443 | Msa0025810:CDS | 30.0% | |
| ! | TTTGAGTGATCCTTCATTTT+TGG | + | chr1_1:49416467-49416486 | Msa0025810:CDS | 30.0% |
| !! | TTGAGTGATCCTTCATTTTT+GGG | + | chr1_1:49416468-49416487 | Msa0025810:CDS | 30.0% |
| TCAAGTAATCCCAAAAATGA+AGG | - | chr1_1:49416480-49416499 | None:intergenic | 30.0% | |
| AGAATGTTCTGTAATTCTTG+AGG | - | chr1_1:49416561-49416580 | None:intergenic | 30.0% | |
| GAATTACAGAACATTCTAGA+TGG | + | chr1_1:49416564-49416583 | Msa0025810:intron | 30.0% | |
| GTTATAGTTTGATCTAGATC+AGG | - | chr1_1:49416695-49416714 | None:intergenic | 30.0% | |
| TATGTTCCTTTCCAAATCTT+TGG | + | chr1_1:49416774-49416793 | Msa0025810:intron | 30.0% | |
| ACATTATGATGGTAATTCGA+AGG | + | chr1_1:49416923-49416942 | Msa0025810:intron | 30.0% | |
| CAATTAATGAAGGAAACAAG+GGG | - | chr1_1:49417124-49417143 | None:intergenic | 30.0% | |
| !!! | ATCGATTTTTTTGGTCATAG+GGG | - | chr1_1:49417218-49417237 | None:intergenic | 30.0% |
| !!! | GGCAGATATATCGATTTTTT+TGG | - | chr1_1:49417227-49417246 | None:intergenic | 30.0% |
| ! | TCCTTGTTCTTCTTTTCATT+TGG | + | chr1_1:49417274-49417293 | Msa0025810:intron | 30.0% |
| AGTGAGCTCTACATTTAATT+TGG | + | chr1_1:49417357-49417376 | Msa0025810:intron | 30.0% | |
| ! | CCATTTTATATATGGAGCAA+GGG | - | chr1_1:49417870-49417889 | None:intergenic | 30.0% |
| ! | GAAAAGTATGAGTTTAGAGA+AGG | - | chr1_1:49417590-49417609 | None:intergenic | 30.0% |
| ! | TAATTTTCTTGTGGAGAATG+AGG | - | chr1_1:49417726-49417745 | None:intergenic | 30.0% |
| CCTTTGCTCCATATATAAAA+TGG | - | chr1_1:49417873-49417892 | None:intergenic | 30.0% | |
| ! | CCATTTTATATATGGAGCAA+AGG | + | chr1_1:49417870-49417889 | Msa0025810:intron | 30.0% |
| AGTGAGCTCTACATTTAATT+TGG | - | chr1_1:49417357-49417376 | None:intergenic | 30.0% | |
| CCAAATGAAAAGAAGAACAA+GGG | + | chr1_1:49418029-49418048 | Msa0025810:intron | 30.0% | |
| CAGAAAAAGACAAGAAACAA+AGG | - | chr1_1:49418139-49418158 | None:intergenic | 30.0% | |
| AGCGTATAAAACACAATTAG+TGG | + | chr1_1:49418280-49418299 | Msa0025810:intron | 30.0% | |
| GCGTATAAAACACAATTAGT+GGG | + | chr1_1:49418281-49418300 | Msa0025810:intron | 30.0% | |
| AAGTTGCTTATAATTGTGAC+CGG | + | chr1_1:49418680-49418699 | Msa0025810:intron | 30.0% | |
| ! | GTTTTGCTTATAATAGTGAC+CGG | - | chr1_1:49419022-49419041 | None:intergenic | 30.0% |
| GCTTATCAGACTTTAACTAT+TGG | - | chr1_1:49419177-49419196 | None:intergenic | 30.0% | |
| TTCGGATCAAAAGAAATCAA+TGG | - | chr1_1:49419659-49419678 | None:intergenic | 30.0% | |
| !! | ATTGATTTCTTTTGATCCGA+AGG | + | chr1_1:49419658-49419677 | Msa0025810:intron | 30.0% |
| AAATTGCAATTATAGGCCTT+CGG | - | chr1_1:49419772-49419791 | None:intergenic | 30.0% | |
| ! | ACAGAGAACAAAGCTTTTAA+TGG | - | chr1_1:49419800-49419819 | None:intergenic | 30.0% |
| TATCTGCAGATATAAAAGGT+TGG | - | chr1_1:49419913-49419932 | None:intergenic | 30.0% | |
| TTGCTATCTGCAGATATAAA+AGG | - | chr1_1:49419917-49419936 | None:intergenic | 30.0% | |
| !! | GTTGATTTCTTTTGATCTGA+AGG | - | chr1_1:49420301-49420320 | None:intergenic | 30.0% |
| ! | ATCCAATATATATAGGTTGG+GGG | + | chr1_1:49420417-49420436 | Msa0025810:intron | 30.0% |
| TTAATTGTCTTGGATTTCGT+AGG | + | chr1_1:49420508-49420527 | Msa0025810:intron | 30.0% | |
| ACTTTACAAAACAAGCTTGT+AGG | + | chr1_1:49421079-49421098 | Msa0025810:intron | 30.0% | |
| CATTATTAAGTTTCGGCTAT+TGG | - | chr1_1:49421220-49421239 | None:intergenic | 30.0% | |
| CAATAGCCGAAACTTAATAA+TGG | + | chr1_1:49421218-49421237 | Msa0025810:intron | 30.0% | |
| GACCATCCATTATTAAGTTT+CGG | - | chr1_1:49421227-49421246 | None:intergenic | 30.0% | |
| ACCATCTTAAAATTGGAGTT+TGG | + | chr1_1:49421262-49421281 | Msa0025810:intron | 30.0% | |
| !! | ACCAAACTCCAATTTTAAGA+TGG | - | chr1_1:49421266-49421285 | None:intergenic | 30.0% |
| TTTATGGTCAAATAACCTAG+CGG | + | chr1_1:49421315-49421334 | Msa0025810:intron | 30.0% | |
| TTATCAACTTACAAGTCAGT+TGG | - | chr1_1:49421424-49421443 | None:intergenic | 30.0% | |
| TTCAAAGTTAATGATACTGG+TGG | + | chr1_1:49421594-49421613 | Msa0025810:intron | 30.0% | |
| ATGACTATACAGTAACAGTA+AGG | + | chr1_1:49421686-49421705 | Msa0025810:intron | 30.0% | |
| AACATGCATGTATCTTTAGA+GGG | - | chr1_1:49421729-49421748 | None:intergenic | 30.0% | |
| AAACATGCATGTATCTTTAG+AGG | - | chr1_1:49421730-49421749 | None:intergenic | 30.0% | |
| !!! | AGTTTCTAAGTTTTTGAGGT+TGG | - | chr1_1:49421932-49421951 | None:intergenic | 30.0% |
| ! | AAGATGGTTCTTTCTTTTGT+TGG | + | chr1_1:49421998-49422017 | Msa0025810:intron | 30.0% |
| TTTGTTGGAAGGATACAAAA+AGG | + | chr1_1:49422013-49422032 | Msa0025810:CDS | 30.0% | |
| TTTCACACTTTGTACACAAA+AGG | + | chr1_1:49422038-49422057 | Msa0025810:CDS | 30.0% | |
| TGAAGGATGGAGAATTTAAA+AGG | + | chr1_1:49422125-49422144 | Msa0025810:CDS | 30.0% | |
| !!! | GAGTATGGTTTTATACACAT+AGG | + | chr1_1:49422214-49422233 | Msa0025810:intron | 30.0% |
| ATCTTCTATATGGTCATCTT+TGG | - | chr1_1:49422291-49422310 | None:intergenic | 30.0% | |
| ! | CAAACAACAACTTCATTTTC+CGG | - | chr1_1:49422641-49422660 | None:intergenic | 30.0% |
| CATTGAAATGACACAAATAC+CGG | - | chr1_1:49422745-49422764 | None:intergenic | 30.0% | |
| ! | ATTTTCCTCATTTGATGCAA+AGG | + | chr1_1:49422799-49422818 | Msa0025810:intron | 30.0% |
| ATAGAAAGGGAAACATTTCA+TGG | + | chr1_1:49422824-49422843 | Msa0025810:intron | 30.0% | |
| TAGAAAGGGAAACATTTCAT+GGG | + | chr1_1:49422825-49422844 | Msa0025810:intron | 30.0% | |
| ATGATATATGTCTCATAGCT+GGG | - | chr1_1:49422896-49422915 | None:intergenic | 30.0% | |
| AATGATATATGTCTCATAGC+TGG | - | chr1_1:49422897-49422916 | None:intergenic | 30.0% | |
| !!! | ATGGCAATTTTTGTTTTTGG+AGG | - | chr1_1:49422996-49423015 | None:intergenic | 30.0% |
| AAAGTGGATACAAATCAACT+TGG | + | chr1_1:49423018-49423037 | Msa0025810:intron | 30.0% | |
| CTTGACTATTACTTTGATTC+TGG | - | chr1_1:49423061-49423080 | None:intergenic | 30.0% | |
| CAGAATCAAAGTAATAGTCA+AGG | + | chr1_1:49423059-49423078 | Msa0025810:intron | 30.0% | |
| GAATCAAAGTAATAGTCAAG+GGG | + | chr1_1:49423061-49423080 | Msa0025810:intron | 30.0% | |
| ! | CCTTTTATAGGCAAAGATTA+GGG | - | chr1_1:49423196-49423215 | None:intergenic | 30.0% |
| CCTAATCTTTGCCTATAAAA+GGG | + | chr1_1:49423194-49423213 | Msa0025810:intron | 30.0% | |
| ! | GAAGAGTAAAGTTTTACTGA+TGG | - | chr1_1:49423566-49423585 | None:intergenic | 30.0% |
| !! | ACTCTTCAAAGGTATCTTTA+CGG | + | chr1_1:49423579-49423598 | Msa0025810:intron | 30.0% |
| !! | CTTTTGATTAGGTATGACAA+TGG | - | chr1_1:49423659-49423678 | None:intergenic | 30.0% |
| TGGGTGTGTGAATAATAATA+TGG | - | chr1_1:49423872-49423891 | None:intergenic | 30.0% | |
| !! | TGTTGGAGATGTTTTTATGT+TGG | - | chr1_1:49424085-49424104 | None:intergenic | 30.0% |
| TGCCAAATGATTGAAAAGTT+TGG | + | chr1_1:49424421-49424440 | Msa0025810:intron | 30.0% | |
| ! | TGCCAAACTTTTCAATCATT+TGG | - | chr1_1:49424426-49424445 | None:intergenic | 30.0% |
| !!! | GTAAGTTTATTTTGAGGATG+AGG | - | chr1_1:49424553-49424572 | None:intergenic | 30.0% |
| GAACTATTTACTGAACTTGA+AGG | - | chr1_1:49424589-49424608 | None:intergenic | 30.0% | |
| TCAAAGATGGAGAAATGAAA+AGG | + | chr1_1:49416424-49416443 | Msa0025810:CDS | 30.0% | |
| ! | TTTGAGTAATCCTGCATTTT+TGG | + | chr1_1:49424772-49424791 | Msa0025810:CDS | 30.0% |
| ! | TTGAGTAATCCTGCATTTTT+GGG | + | chr1_1:49424773-49424792 | Msa0025810:CDS | 30.0% |
| AGAATGTTCTGTAATTCTTG+AGG | - | chr1_1:49416561-49416580 | None:intergenic | 30.0% | |
| GAATTACAGAACATTCTAGA+TGG | + | chr1_1:49416564-49416583 | Msa0025810:intron | 30.0% | |
| TATGTTCCTTTCCAAATCTT+CGG | + | chr1_1:49416774-49416793 | Msa0025810:intron | 30.0% | |
| ! | ACTATGTCTAAAGCATCTTT+AGG | - | chr1_1:49425254-49425273 | None:intergenic | 30.0% |
| ! | AAGCAAATCAAAGGAAGTTT+TGG | - | chr1_1:49425343-49425362 | None:intergenic | 30.0% |
| !! | AAAACTTCCTTTGATTTGCT+TGG | + | chr1_1:49425342-49425361 | Msa0025810:intron | 30.0% |
| CTAATTTCCAAGCAAATCAA+AGG | - | chr1_1:49425352-49425371 | None:intergenic | 30.0% | |
| AGAAATAACATTGAAGGGAA+AGG | + | chr1_1:49425370-49425389 | Msa0025810:intron | 30.0% | |
| TTGAAGGGAAAGGATATTAA+TGG | + | chr1_1:49425380-49425399 | Msa0025810:intron | 30.0% | |
| GGTAAATTAAACAGGATGAA+AGG | + | chr1_1:49425433-49425452 | Msa0025810:intron | 30.0% | |
| TGACAATGTTGAAAACTCTT+GGG | - | chr1_1:49425586-49425605 | None:intergenic | 30.0% | |
| TTGACAATGTTGAAAACTCT+TGG | - | chr1_1:49425587-49425606 | None:intergenic | 30.0% | |
| TCAACATTGTCAAGAAGTAA+AGG | + | chr1_1:49425594-49425613 | Msa0025810:intron | 30.0% | |
| AAGAGTTATGTAATAAAGGC+TGG | - | chr1_1:49425694-49425713 | None:intergenic | 30.0% | |
| TATAAGATGGGAAGAGTAAT+TGG | + | chr1_1:49425721-49425740 | Msa0025810:intron | 30.0% | |
| !!! | TTTTTTGGTAGTGAAACTGA+GGG | - | chr1_1:49425824-49425843 | None:intergenic | 30.0% |
| !!! | TTTTTTTGGTAGTGAAACTG+AGG | - | chr1_1:49425825-49425844 | None:intergenic | 30.0% |
| AAAAACCCTCAGTTTATGAA+TGG | + | chr1_1:49425849-49425868 | Msa0025810:intron | 30.0% | |
| GAATTCCATTCATAAACTGA+GGG | - | chr1_1:49425857-49425876 | None:intergenic | 30.0% | |
| TGAATTCCATTCATAAACTG+AGG | - | chr1_1:49425858-49425877 | None:intergenic | 30.0% | |
| CAAAACTGTTTGATCATGAT+CGG | + | chr1_1:49425927-49425946 | Msa0025810:intron | 30.0% | |
| ! | GAGAAATATACGAAGTTGAT+AGG | - | chr1_1:49426135-49426154 | None:intergenic | 30.0% |
| AATTAGAGAAGAATGTGTGA+CGG | + | chr1_1:49426224-49426243 | Msa0025810:intron | 30.0% | |
| !! | GTTTTTCAAAGTATCTTGGA+AGG | + | chr1_1:49426579-49426598 | Msa0025810:intron | 30.0% |
| CCACACCAATCTATATATAT+TGG | - | chr1_1:49426629-49426648 | None:intergenic | 30.0% | |
| CCAATATATATAGATTGGTG+TGG | + | chr1_1:49426626-49426645 | Msa0025810:intron | 30.0% | |
| !!! | ATCACACTAGGTTTTAGTTT+CGG | - | chr1_1:49426657-49426676 | None:intergenic | 30.0% |
| ! | TTTAAAGCATGTATCACACT+AGG | - | chr1_1:49426669-49426688 | None:intergenic | 30.0% |
| CTAAGACAATTAGATCTTGT+GGG | - | chr1_1:49426740-49426759 | None:intergenic | 30.0% | |
| ! | TCTAAGACAATTAGATCTTG+TGG | - | chr1_1:49426741-49426760 | None:intergenic | 30.0% |
| TATTATTAGGTTTCGGCTAT+TGG | - | chr1_1:49427083-49427102 | None:intergenic | 30.0% | |
| GACAGTCTATTATTAGGTTT+CGG | - | chr1_1:49427090-49427109 | None:intergenic | 30.0% | |
| ATGTTGGACAGTCTATTATT+AGG | - | chr1_1:49427096-49427115 | None:intergenic | 30.0% | |
| ATTGGGCTATTCTTTCTAAA+TGG | + | chr1_1:49427248-49427267 | Msa0025810:intron | 30.0% | |
| AGAATAATTAACCGTCTGAT+GGG | - | chr1_1:49427351-49427370 | None:intergenic | 30.0% | |
| GAATTGTGTACCTTTGAATT+AGG | - | chr1_1:49427465-49427484 | None:intergenic | 30.0% | |
| AGCCAAATAGATACATGTTA+TGG | + | chr1_1:49427573-49427592 | Msa0025810:intron | 30.0% | |
| CATATGGATACAAATAACGA+TGG | - | chr1_1:49427638-49427657 | None:intergenic | 30.0% | |
| AAAATCAGTGACAAAACACA+CGG | - | chr1_1:49427820-49427839 | None:intergenic | 30.0% | |
| TAAGATTGAAATTGTAGGGT+TGG | - | chr1_1:49427906-49427925 | None:intergenic | 30.0% | |
| ! | CGATCTGCTAATTTGATTTA+TGG | - | chr1_1:49427957-49427976 | None:intergenic | 30.0% |
| ! | TCAGTCTCAATTTTGGATTT+TGG | + | chr1_1:49427999-49428018 | Msa0025810:intron | 30.0% |
| ! | CAGTCTCAATTTTGGATTTT+GGG | + | chr1_1:49428000-49428019 | Msa0025810:intron | 30.0% |
| GATTTCACATGTCAATTCTT+CGG | - | chr1_1:49428066-49428085 | None:intergenic | 30.0% | |
| !!! | GACCCGTTTTTTTAGTTAAA+CGG | + | chr1_1:49428178-49428197 | Msa0025810:intron | 30.0% |
| !!! | ACCCGTTTTTTTAGTTAAAC+GGG | + | chr1_1:49428179-49428198 | Msa0025810:intron | 30.0% |
| CTCATTGTCATATAAGAGTA+AGG | - | chr1_1:49428434-49428453 | None:intergenic | 30.0% | |
| CTTACTCTTATATGACAATG+AGG | + | chr1_1:49428432-49428451 | Msa0025810:intron | 30.0% | |
| GAGGAATTTAATGTGTCAAT+AGG | + | chr1_1:49428451-49428470 | Msa0025810:intron | 30.0% | |
| ! | ATTTTTCATCCCCAATTATC+TGG | + | chr1_1:49428475-49428494 | Msa0025810:intron | 30.0% |
| GTTAAGTCATCAAAATTCAG+TGG | + | chr1_1:49429737-49429756 | Msa0025810:intron | 30.0% | |
| !! | ATTCAGTGGCTTTAAGTATA+AGG | + | chr1_1:49429751-49429770 | Msa0025810:intron | 30.0% |
| ATTGTCTATTCTCTATCAAG+TGG | + | chr1_1:49430790-49430809 | Msa0025810:intron | 30.0% | |
| TTGTCTATTCTCTATCAAGT+GGG | + | chr1_1:49430791-49430810 | Msa0025810:intron | 30.0% | |
| TAAGTAATGTCATACCGATA+GGG | - | chr1_1:49430855-49430874 | None:intergenic | 30.0% | |
| TTAAGTAATGTCATACCGAT+AGG | - | chr1_1:49430856-49430875 | None:intergenic | 30.0% | |
| AAAAATTAGGTTACAAGCAG+CGG | - | chr1_1:49431157-49431176 | None:intergenic | 30.0% | |
| CATCATACTCTGTCATATAA+AGG | + | chr1_1:49431317-49431336 | Msa0025810:intron | 30.0% | |
| ATGCTTATGTGCAAAATATG+TGG | + | chr1_1:49431530-49431549 | Msa0025810:intron | 30.0% | |
| TTATATATATGTGGGATCAG+TGG | + | chr1_1:49431702-49431721 | Msa0025810:intron | 30.0% | |
| TATATATATGTGGGATCAGT+GGG | + | chr1_1:49431703-49431722 | Msa0025810:intron | 30.0% | |
| CATGTGCACACTATAAAATA+TGG | + | chr1_1:49431843-49431862 | Msa0025810:intron | 30.0% | |
| ATCTCAATGAGCATCATAAT+TGG | + | chr1_1:49431934-49431953 | Msa0025810:intron | 30.0% | |
| ! | GATGCTTAAGTCAATTTTGT+TGG | + | chr1_1:49431956-49431975 | Msa0025810:intron | 30.0% |
| ATATATATTTGCATGCTACG+AGG | - | chr1_1:49431996-49432015 | None:intergenic | 30.0% | |
| AACACAATATCATACTCGAT+AGG | - | chr1_1:49432093-49432112 | None:intergenic | 30.0% | |
| ! | AAAAAGGATGTGGATTAATG+TGG | - | chr1_1:49432177-49432196 | None:intergenic | 30.0% |
| TAGTTTGAAGAAAAAGGATG+TGG | - | chr1_1:49432187-49432206 | None:intergenic | 30.0% | |
| AAATTCAAGAATCCCCAAAT+TGG | - | chr1_1:49432225-49432244 | None:intergenic | 30.0% | |
| TAGAAGTCATATATCCACAT+AGG | - | chr1_1:49432394-49432413 | None:intergenic | 30.0% | |
| TACTCATATATACAAGTCTG+TGG | - | chr1_1:49432449-49432468 | None:intergenic | 30.0% | |
| !!! | TCTACAATATTTTGGGTTAG+TGG | + | chr1_1:49432495-49432514 | Msa0025810:intron | 30.0% |
| !!! | CTACAATATTTTGGGTTAGT+GGG | + | chr1_1:49432496-49432515 | Msa0025810:intron | 30.0% |
| ! | GAGAATGTGTCATTAAAGAA+TGG | - | chr1_1:49432553-49432572 | None:intergenic | 30.0% |
| !!! | GTATGATTTGTTTTCCCTAT+CGG | + | chr1_1:49432631-49432650 | Msa0025810:intron | 30.0% |
| ! | ATTGAGTATTTTCATCCAAG+TGG | + | chr1_1:49432771-49432790 | Msa0025810:intron | 30.0% |
| ! | TTGAGTATTTTCATCCAAGT+GGG | + | chr1_1:49432772-49432791 | Msa0025810:intron | 30.0% |
| ATTGGGCTATTCTTTCTAAA+TGG | + | chr1_1:49427248-49427267 | Msa0025810:intron | 30.0% | |
| AGAATAATTAACCGTCTGAT+GGG | - | chr1_1:49427351-49427370 | None:intergenic | 30.0% | |
| !!! | AAAACTGGCTTGTAAGTTTT+TGG | + | chr1_1:49433288-49433307 | Msa0025810:intron | 30.0% |
| !! | CAAGTCAATTGGTAGTTTTA+AGG | - | chr1_1:49433402-49433421 | None:intergenic | 30.0% |
| TCATCAACTTACAAGTCAAT+TGG | - | chr1_1:49433413-49433432 | None:intergenic | 30.0% | |
| !! | TTTTTAAAAAGCCTAAGCCT+AGG | - | chr1_1:49433634-49433653 | None:intergenic | 30.0% |
| CTATCTATTAGTCCCTTAAT+AGG | + | chr1_1:49433798-49433817 | Msa0025810:intron | 30.0% | |
| !! | GTTGTTATAGGCTTTTAAGT+AGG | + | chr1_1:49433825-49433844 | Msa0025810:intron | 30.0% |
| ! | GCTTGTTTAGCTTATTTAGT+AGG | + | chr1_1:49433904-49433923 | Msa0025810:intron | 30.0% |
| TACAGGCCTACTTTATATTA+AGG | - | chr1_1:49433950-49433969 | None:intergenic | 30.0% | |
| !! | CTTATAAATGGTATTGGCTT+GGG | - | chr1_1:49434136-49434155 | None:intergenic | 30.0% |
| ! | TTTTGTTAAGAGTTCCATGA+TGG | - | chr1_1:49434182-49434201 | None:intergenic | 30.0% |
| ! | TATTGTCAAAGATTTTGCCT+TGG | + | chr1_1:49434215-49434234 | Msa0025810:intron | 30.0% |
| ! | ATTGTCAAAGATTTTGCCTT+GGG | + | chr1_1:49434216-49434235 | Msa0025810:intron | 30.0% |
| GTATTTGTGTCTTTGAATTC+AGG | - | chr1_1:49434274-49434293 | None:intergenic | 30.0% | |
| AAGATCGTTCTTTGTGAATA+TGG | - | chr1_1:49434304-49434323 | None:intergenic | 30.0% | |
| TTCAAAGTTAATGATACTGG+TGG | + | chr1_1:49421594-49421613 | Msa0025810:intron | 30.0% | |
| ! | TGAAAACTTCGAAGTTTTTG+AGG | - | chr1_1:49434629-49434648 | None:intergenic | 30.0% |
| ! | AAGATGGTTCTTTCTTTTGT+TGG | + | chr1_1:49421998-49422017 | Msa0025810:intron | 30.0% |
| ! | AGATGGTTCTTTCTTTTGTT+GGG | + | chr1_1:49421999-49422018 | Msa0025810:intron | 30.0% |
| TTTGTTGGGAAGATACAAAA+AGG | + | chr1_1:49434706-49434725 | Msa0025810:CDS | 30.0% | |
| TTTCACACTTTGTACACAAA+AGG | + | chr1_1:49422038-49422057 | Msa0025810:CDS | 30.0% | |
| TGAAGGATGGAGAAATTAAA+AGG | + | chr1_1:49434818-49434837 | Msa0025810:CDS | 30.0% | |
| AGAATGTTCTGTAATTCATG+AGG | - | chr1_1:49434955-49434974 | None:intergenic | 30.0% | |
| GAATTACAGAACATTCTACT+TGG | + | chr1_1:49434958-49434977 | Msa0025810:intron | 30.0% | |
| ! | CTTTTGTGCTATCTTCTATA+TGG | - | chr1_1:49434994-49435013 | None:intergenic | 30.0% |
| CCATCACATATACAATTTCA+AGG | - | chr1_1:49435110-49435129 | None:intergenic | 30.0% | |
| CCTTGAAATTGTATATGTGA+TGG | + | chr1_1:49435107-49435126 | Msa0025810:intron | 30.0% | |
| GGACATTGCATAATATATGT+AGG | - | chr1_1:49435256-49435275 | None:intergenic | 30.0% | |
| GAAACTTCGTACTTATAACA+TGG | - | chr1_1:49435649-49435668 | None:intergenic | 30.0% | |
| ATACAAATATGGAGAAACCA+AGG | - | chr1_1:49435756-49435775 | None:intergenic | 30.0% | |
| GTTAAATGACACGATTATGA+TGG | + | chr1_1:49435875-49435894 | Msa0025810:intron | 30.0% | |
| ACATGCAAGCAATAAATATC+GGG | + | chr1_1:49435916-49435935 | Msa0025810:intron | 30.0% | |
| AAAAAAAGCTTGAGAACCAA+CGG | + | chr1_1:49436103-49436122 | Msa0025810:intron | 30.0% | |
| TAATAAACGTTTCCCGATTA+TGG | - | chr1_1:49436236-49436255 | None:intergenic | 30.0% | |
| !! | CATTTGTTTGAGTTGGTAAT+GGG | - | chr1_1:49436293-49436312 | None:intergenic | 30.0% |
| !! | ACATTTGTTTGAGTTGGTAA+TGG | - | chr1_1:49436294-49436313 | None:intergenic | 30.0% |
| CACATTACATTTGTTTGAGT+TGG | - | chr1_1:49436300-49436319 | None:intergenic | 30.0% | |
| CAACTCAAACAAATGTAATG+TGG | + | chr1_1:49436298-49436317 | Msa0025810:intron | 30.0% | |
| CATTCAGCTACAATGAAAAA+AGG | + | chr1_1:49436471-49436490 | Msa0025810:intron | 30.0% | |
| AGCTACAATGAAAAAAGGAA+AGG | + | chr1_1:49436476-49436495 | Msa0025810:intron | 30.0% | |
| TACAATGAAAAAAGGAAAGG+CGG | + | chr1_1:49436479-49436498 | Msa0025810:intron | 30.0% | |
| ! | CCCATTTCAAATTCTTTTGT+TGG | + | chr1_1:49436530-49436549 | Msa0025810:intron | 30.0% |
| AGGCTTATGATTCAGTAAAT+TGG | - | chr1_1:49436641-49436660 | None:intergenic | 30.0% | |
| ! | CTTTGAAAATACCTGACAAT+AGG | - | chr1_1:49436747-49436766 | None:intergenic | 30.0% |
| CTTGACTTACATTTATTAGG+TGG | - | chr1_1:49436806-49436825 | None:intergenic | 30.0% | |
| ! | TAAGTCAAGAGATTTTGCAT+TGG | + | chr1_1:49436817-49436836 | Msa0025810:intron | 30.0% |
| ! | AAGTCAAGAGATTTTGCATT+GGG | + | chr1_1:49436818-49436837 | Msa0025810:intron | 30.0% |
| ! | TTTGAAGTCAAGATGTGATA+TGG | - | chr1_1:49436859-49436878 | None:intergenic | 30.0% |
| CTAACTAACTAAAGACGTAT+TGG | + | chr1_1:49436918-49436937 | Msa0025810:intron | 30.0% | |
| CTCATTAAAAGACACATTTG+AGG | + | chr1_1:49436954-49436973 | Msa0025810:intron | 30.0% | |
| ACAAATAATATCCAAGAGTG+TGG | - | chr1_1:49437139-49437158 | None:intergenic | 30.0% | |
| ! | TAGAGAAGGATATTTTGCTG+TGG | + | chr1_1:49416395-49416414 | Msa0025810:CDS | 35.0% |
| !! | TAGACCAGAAGAGCTTTAAA+TGG | + | chr1_1:49416603-49416622 | Msa0025810:intron | 35.0% |
| AAGCTACCAAAGATTTGGAA+AGG | - | chr1_1:49416783-49416802 | None:intergenic | 35.0% | |
| GACAAAAGCTACCAAAGATT+TGG | - | chr1_1:49416788-49416807 | None:intergenic | 35.0% | |
| GCCAAATGAAAAGAAGAACA+AGG | - | chr1_1:49418028-49418047 | None:intergenic | 35.0% | |
| CCCTTGCTCCATATATAAAA+TGG | + | chr1_1:49417448-49417467 | Msa0025810:intron | 35.0% | |
| !! | GCCATTTTATATATGGAGCA+AGG | - | chr1_1:49417869-49417888 | None:intergenic | 35.0% |
| !! | CATGCTCGCCATTTTATATA+TGG | - | chr1_1:49417862-49417881 | None:intergenic | 35.0% |
| TCATCTCTCACCTTAACATT+TGG | + | chr1_1:49417608-49417627 | Msa0025810:intron | 35.0% | |
| AGCTACATACATGACACAAA+AGG | - | chr1_1:49417671-49417690 | None:intergenic | 35.0% | |
| GTATACACATTTGCAAGAAG+TGG | + | chr1_1:49417698-49417717 | Msa0025810:intron | 35.0% | |
| TAAATGCACTTCCCAACAAA+TGG | + | chr1_1:49417780-49417799 | Msa0025810:intron | 35.0% | |
| AGCAAGTTCTTCCATTTGTT+GGG | - | chr1_1:49417794-49417813 | None:intergenic | 35.0% | |
| !! | CATGCTCGCCATTTTATATA+TGG | + | chr1_1:49417862-49417881 | Msa0025810:intron | 35.0% |
| GCCAAATGAAAAGAAGAACA+AGG | + | chr1_1:49418028-49418047 | Msa0025810:intron | 35.0% | |
| ! | CCCTTGTTCTTCTTTTCATT+TGG | - | chr1_1:49418032-49418051 | None:intergenic | 35.0% |
| !! | GGGGTATTTTTGTATTTGTG+CGG | - | chr1_1:49418406-49418425 | None:intergenic | 35.0% |
| AAATACAAAAATACCCCCAG+CGG | + | chr1_1:49418409-49418428 | Msa0025810:intron | 35.0% | |
| ! | TTTGATATTTTCACCGTGTG+TGG | + | chr1_1:49418497-49418516 | Msa0025810:intron | 35.0% |
| ! | TTGATATTTTCACCGTGTGT+GGG | + | chr1_1:49418498-49418517 | Msa0025810:intron | 35.0% |
| TAAATAAGAGTTACTCCCTC+CGG | - | chr1_1:49418702-49418721 | None:intergenic | 35.0% | |
| GATGGAAATAAGATCTGTTG+CGG | + | chr1_1:49418760-49418779 | Msa0025810:intron | 35.0% | |
| GGTCAATCATGATCTTGTTA+TGG | + | chr1_1:49418969-49418988 | Msa0025810:intron | 35.0% | |
| ACAAGAATAAACCTTTGCCA+GGG | - | chr1_1:49419416-49419435 | None:intergenic | 35.0% | |
| GCAAAGGTTTATTCTTGTCT+AGG | + | chr1_1:49419418-49419437 | Msa0025810:intron | 35.0% | |
| AAGGTTTCATACTCTTGTCA+AGG | - | chr1_1:49419468-49419487 | None:intergenic | 35.0% | |
| CATTTCCTAATTTGATCCGA+AGG | + | chr1_1:49419753-49419772 | Msa0025810:intron | 35.0% | |
| AAACGAGGCTTAAAGGAAAA+AGG | - | chr1_1:49419988-49420007 | None:intergenic | 35.0% | |
| AAGAACAAGATGTAGAAACG+AGG | - | chr1_1:49420003-49420022 | None:intergenic | 35.0% | |
| !! | CATTTCTTAATTTGTTCCGC+TGG | - | chr1_1:49420229-49420248 | None:intergenic | 35.0% |
| ! | CCAAGATACTTTAAAGAGTC+AGG | - | chr1_1:49420373-49420392 | None:intergenic | 35.0% |
| !! | CCTGACTCTTTAAAGTATCT+TGG | + | chr1_1:49420370-49420389 | Msa0025810:intron | 35.0% |
| TTCCCCCAACCTATATATAT+TGG | - | chr1_1:49420422-49420441 | None:intergenic | 35.0% | |
| !!! | GCGACACTAGATTTTAGTTT+CGG | - | chr1_1:49420446-49420465 | None:intergenic | 35.0% |
| ATACACCATATAATCTGACG+TGG | + | chr1_1:49420866-49420885 | Msa0025810:intron | 35.0% | |
| ! | GAGTTCAACATTGGATTAGA+TGG | - | chr1_1:49421140-49421159 | None:intergenic | 35.0% |
| ACGTGTTAAGAGTTCAACAT+TGG | - | chr1_1:49421149-49421168 | None:intergenic | 35.0% | |
| ! | AGCCGAAACTTAATAATGGA+TGG | + | chr1_1:49421222-49421241 | Msa0025810:intron | 35.0% |
| TTATGGTCAAATAACCTAGC+GGG | + | chr1_1:49421316-49421335 | Msa0025810:intron | 35.0% | |
| ! | GGGCTCACACATTTTAAATA+TGG | + | chr1_1:49421341-49421360 | Msa0025810:intron | 35.0% |
| AAATATGGAGAAGTGGAGTT+TGG | + | chr1_1:49421356-49421375 | Msa0025810:intron | 35.0% | |
| ! | CAAAGATTTTACCTTGGGTT+TGG | + | chr1_1:49421496-49421515 | Msa0025810:intron | 35.0% |
| TGTACATAATTCCAAACCCA+AGG | - | chr1_1:49421510-49421529 | None:intergenic | 35.0% | |
| TACATTGTGCTTGTGTTGAA+TGG | - | chr1_1:49421635-49421654 | None:intergenic | 35.0% | |
| ! | ACATGCATGTATCTTTAGAG+GGG | - | chr1_1:49421728-49421747 | None:intergenic | 35.0% |
| ATTAACGCGTAGTTACAGTT+TGG | - | chr1_1:49421844-49421863 | None:intergenic | 35.0% | |
| ! | TGGTTCTTTCTTTTGTTGGA+AGG | + | chr1_1:49422002-49422021 | Msa0025810:CDS | 35.0% |
| TTTGAGTGATCCTGAATTCT+TGG | + | chr1_1:49422168-49422187 | Msa0025810:CDS | 35.0% | |
| TTGAGTGATCCTGAATTCTT+GGG | + | chr1_1:49422169-49422188 | Msa0025810:CDS | 35.0% | |
| TCTAGTAATCCCAAGAATTC+AGG | - | chr1_1:49422181-49422200 | None:intergenic | 35.0% | |
| CACAAATACCGGTATAAAAC+CGG | - | chr1_1:49422734-49422753 | None:intergenic | 35.0% | |
| TATCACCTTTGCATCAAATG+AGG | - | chr1_1:49422807-49422826 | None:intergenic | 35.0% | |
| TTGATGCAAAGGTGATAGAA+AGG | + | chr1_1:49422810-49422829 | Msa0025810:intron | 35.0% | |
| TGATGCAAAGGTGATAGAAA+GGG | + | chr1_1:49422811-49422830 | Msa0025810:intron | 35.0% | |
| GAGGAATTTCATCATCGTTT+GGG | - | chr1_1:49422953-49422972 | None:intergenic | 35.0% | |
| TGAGGAATTTCATCATCGTT+TGG | - | chr1_1:49422954-49422973 | None:intergenic | 35.0% | |
| TACAAATCAACTTGGACCAA+AGG | + | chr1_1:49423026-49423045 | Msa0025810:intron | 35.0% | |
| ACAAATCAACTTGGACCAAA+GGG | + | chr1_1:49423027-49423046 | Msa0025810:intron | 35.0% | |
| TATAGGCAAAGATTAGGGTT+GGG | - | chr1_1:49423191-49423210 | None:intergenic | 35.0% | |
| TTATAGGCAAAGATTAGGGT+TGG | - | chr1_1:49423192-49423211 | None:intergenic | 35.0% | |
| CCCTAATCTTTGCCTATAAA+AGG | + | chr1_1:49423193-49423212 | Msa0025810:intron | 35.0% | |
| ! | CCCTTTTATAGGCAAAGATT+AGG | - | chr1_1:49423197-49423216 | None:intergenic | 35.0% |
| !!! | TTCAATCTGGTTTTCACTCT+TGG | + | chr1_1:49423334-49423353 | Msa0025810:intron | 35.0% |
| AAAACTGCAGAAAACTCAGA+AGG | - | chr1_1:49423399-49423418 | None:intergenic | 35.0% | |
| AGGGTAAGATCATTCGATTA+TGG | + | chr1_1:49423455-49423474 | Msa0025810:intron | 35.0% | |
| !!! | CATGTCATTTTCGATTGAAC+TGG | + | chr1_1:49423504-49423523 | Msa0025810:intron | 35.0% |
| ! | GAGTAAAGTTTTACTGATGG+TGG | - | chr1_1:49423563-49423582 | None:intergenic | 35.0% |
| !! | CAAAGGTATCTTTACGGTAA+CGG | + | chr1_1:49423585-49423604 | Msa0025810:intron | 35.0% |
| !! | AAAGGTATCTTTACGGTAAC+GGG | + | chr1_1:49423586-49423605 | Msa0025810:intron | 35.0% |
| !! | ACGGACATGTTCTTTTGATT+AGG | - | chr1_1:49423670-49423689 | None:intergenic | 35.0% |
| ! | AGTCTTATACAGGGGATTAA+TGG | + | chr1_1:49423784-49423803 | Msa0025810:intron | 35.0% |
| !! | TGCATTTTGGCACAATTCAT+GGG | - | chr1_1:49423911-49423930 | None:intergenic | 35.0% |
| TTCGTGGTTATTCTTGAACT+TGG | + | chr1_1:49423951-49423970 | Msa0025810:intron | 35.0% | |
| TCGCTATATATAGCAAAGCT+CGG | + | chr1_1:49423977-49423996 | Msa0025810:intron | 35.0% | |
| AGACTAATTTCACGACATGT+TGG | - | chr1_1:49424102-49424121 | None:intergenic | 35.0% | |
| TAAGGAGTCGTATATATCCA+GGG | + | chr1_1:49424181-49424200 | Msa0025810:intron | 35.0% | |
| ATCCAGGGACAACAAATTAT+TGG | + | chr1_1:49424196-49424215 | Msa0025810:intron | 35.0% | |
| !!! | CAACTTTTTGGTTAAAGGGA+TGG | + | chr1_1:49424235-49424254 | Msa0025810:intron | 35.0% |
| ! | TAGAGAAGGATATTTTGCTG+TGG | + | chr1_1:49416395-49416414 | Msa0025810:CDS | 35.0% |
| TCAAGTAATCCCAAAAATGC+AGG | - | chr1_1:49424785-49424804 | None:intergenic | 35.0% | |
| !! | TAGAACAGAAGAGCATCAAA+TGG | + | chr1_1:49424902-49424921 | Msa0025810:CDS | 35.0% |
| TCTAGTTGTTCATCTAGATC+AGG | - | chr1_1:49425002-49425021 | None:intergenic | 35.0% | |
| AAACTACCGAAGATTTGGAA+AGG | - | chr1_1:49425068-49425087 | None:intergenic | 35.0% | |
| GACAAAAACTACCGAAGATT+TGG | - | chr1_1:49425073-49425092 | None:intergenic | 35.0% | |
| !! | CAATTGACGTTGGAGTATTT+TGG | + | chr1_1:49425142-49425161 | Msa0025810:intron | 35.0% |
| !! | CAAATCAAAGGAAGTTTTGG+TGG | - | chr1_1:49425340-49425359 | None:intergenic | 35.0% |
| ! | CAGATTTGGAACTAAATTGC+TGG | + | chr1_1:49425473-49425492 | Msa0025810:intron | 35.0% |
| ! | AGTAATTGGTCACTTTGTGA+CGG | + | chr1_1:49425735-49425754 | Msa0025810:intron | 35.0% |
| ! | AAAGTATCTTGGAAGGGATT+CGG | + | chr1_1:49426586-49426605 | Msa0025810:intron | 35.0% |
| CTAATTGTCTTAGATTCCGT+AGG | + | chr1_1:49426747-49426766 | Msa0025810:intron | 35.0% | |
| AACCAACATGTAGATGACAA+TGG | + | chr1_1:49426951-49426970 | Msa0025810:intron | 35.0% | |
| CCAACATATCGAAGATATGT+TGG | - | chr1_1:49427112-49427131 | None:intergenic | 35.0% | |
| CCAACATATCTTCGATATGT+TGG | + | chr1_1:49427109-49427128 | Msa0025810:intron | 35.0% | |
| TTAAATAGCTAAACGGCTGA+GGG | - | chr1_1:49427321-49427340 | None:intergenic | 35.0% | |
| TTTAAATAGCTAAACGGCTG+AGG | - | chr1_1:49427322-49427341 | None:intergenic | 35.0% | |
| CAGAATAATTAACCGTCTGA+TGG | - | chr1_1:49427352-49427371 | None:intergenic | 35.0% | |
| !! | CCTTTGAATTAGGTTGATGA+AGG | - | chr1_1:49427455-49427474 | None:intergenic | 35.0% |
| CCTTCATCAACCTAATTCAA+AGG | + | chr1_1:49427452-49427471 | Msa0025810:intron | 35.0% | |
| AATCGCGATTGAGATACAAA+AGG | - | chr1_1:49428088-49428107 | None:intergenic | 35.0% | |
| AAATTTCGACGATTCAAGTG+GGG | - | chr1_1:49428115-49428134 | None:intergenic | 35.0% | |
| CAAATTTCGACGATTCAAGT+GGG | - | chr1_1:49428116-49428135 | None:intergenic | 35.0% | |
| ACAAATTTCGACGATTCAAG+TGG | - | chr1_1:49428117-49428136 | None:intergenic | 35.0% | |
| TCACTAATGAGAATCCAATC+AGG | + | chr1_1:49428137-49428156 | Msa0025810:intron | 35.0% | |
| GCCCGTTTAACTAAAAAAAC+GGG | - | chr1_1:49428183-49428202 | None:intergenic | 35.0% | |
| CGCCCGTTTAACTAAAAAAA+CGG | - | chr1_1:49428184-49428203 | None:intergenic | 35.0% | |
| !! | CGAATTTATAGTGGGTGTAT+TGG | + | chr1_1:49430001-49430020 | Msa0025810:intron | 35.0% |
| AATTGTAATCTCACCTATCG+TGG | + | chr1_1:49430283-49430302 | Msa0025810:intron | 35.0% | |
| TGCATAATTGTATCCACGAT+AGG | - | chr1_1:49430299-49430318 | None:intergenic | 35.0% | |
| AATGTCATTCAAGGACCTTA+AGG | - | chr1_1:49430509-49430528 | None:intergenic | 35.0% | |
| CTATGTATTGTGTAACGTGA+TGG | + | chr1_1:49430824-49430843 | Msa0025810:intron | 35.0% | |
| ATAGTGTGCACATGAGTATA+TGG | - | chr1_1:49431837-49431856 | None:intergenic | 35.0% | |
| CCTCATAAAATGTGGAATGT+TGG | - | chr1_1:49432034-49432053 | None:intergenic | 35.0% | |
| ! | CCAACATTCCACATTTTATG+AGG | + | chr1_1:49432031-49432050 | Msa0025810:intron | 35.0% |
| ATATACAAGTCTGTGGTTAG+TGG | - | chr1_1:49432442-49432461 | None:intergenic | 35.0% | |
| TGCAGAAATTGAATCCGATA+GGG | - | chr1_1:49432648-49432667 | None:intergenic | 35.0% | |
| TTAAATAGCTAAACGGCTGA+GGG | - | chr1_1:49427321-49427340 | None:intergenic | 35.0% | |
| TTTAAATAGCTAAACGGCTG+AGG | - | chr1_1:49427322-49427341 | None:intergenic | 35.0% | |
| CAGAATAATTAACCGTCTGA+TGG | - | chr1_1:49427352-49427371 | None:intergenic | 35.0% | |
| !! | CCTTTGAATTAGGTTGATGA+AGG | - | chr1_1:49427455-49427474 | None:intergenic | 35.0% |
| CCTTCATCAACCTAATTCAA+AGG | + | chr1_1:49427452-49427471 | Msa0025810:intron | 35.0% | |
| TAATCCACCTAAATTGACAC+CGG | + | chr1_1:49433482-49433501 | Msa0025810:intron | 35.0% | |
| AAAAGCCTGTTAAGCCTAAT+AGG | + | chr1_1:49433691-49433710 | Msa0025810:intron | 35.0% | |
| TATTAATAGGCCAGCCTATT+AGG | - | chr1_1:49433708-49433727 | None:intergenic | 35.0% | |
| !! | AGGCTTTTAAGTAGGCTTTA+AGG | + | chr1_1:49433833-49433852 | Msa0025810:intron | 35.0% |
| TATAAAGTAGGCCTGTAAGT+AGG | + | chr1_1:49433953-49433972 | Msa0025810:intron | 35.0% | |
| !!! | AGGCCTGTAAATTTTTTCGT+AGG | + | chr1_1:49434055-49434074 | Msa0025810:intron | 35.0% |
| TGGCCTACGAAAAAATTTAC+AGG | - | chr1_1:49434061-49434080 | None:intergenic | 35.0% | |
| !!! | TGTAAATTTTTTCGTAGGCC+AGG | + | chr1_1:49434060-49434079 | Msa0025810:intron | 35.0% |
| !! | GCTTATAAATGGTATTGGCT+TGG | - | chr1_1:49434137-49434156 | None:intergenic | 35.0% |
| ! | AGACCATATTTTCTCCATCA+TGG | + | chr1_1:49434165-49434184 | Msa0025810:intron | 35.0% |
| ! | GTTCCATGATGGAGAAAATA+TGG | - | chr1_1:49434171-49434190 | None:intergenic | 35.0% |
| TACATTGTGCTTGTGTTGAA+TGG | - | chr1_1:49421635-49421654 | None:intergenic | 35.0% | |
| !!! | AACTTCGAAGTTTTTGAGGT+TGG | - | chr1_1:49434625-49434644 | None:intergenic | 35.0% |
| !!! | TTTTGCTGTTGTTGCAATGA+AGG | + | chr1_1:49434801-49434820 | Msa0025810:CDS | 35.0% |
| TTGAGTGATCCTGAATTCTT+GGG | + | chr1_1:49422169-49422188 | Msa0025810:CDS | 35.0% | |
| !!! | GAGTATGGTTTTAGACACAA+AGG | + | chr1_1:49434907-49434926 | Msa0025810:CDS | 35.0% |
| GCTAAATCAAGATGCAACAA+AGG | + | chr1_1:49435013-49435032 | Msa0025810:intron | 35.0% | |
| !!! | CTTTTTCAAGGTGAGTAAGT+GGG | + | chr1_1:49435208-49435227 | Msa0025810:intron | 35.0% |
| !!! | TTTTTCAAGGTGAGTAAGTG+GGG | + | chr1_1:49435209-49435228 | Msa0025810:intron | 35.0% |
| GCATAATATATGTAGGGGTA+GGG | - | chr1_1:49435249-49435268 | None:intergenic | 35.0% | |
| TGCATAATATATGTAGGGGT+AGG | - | chr1_1:49435250-49435269 | None:intergenic | 35.0% | |
| GAAAAGTCATTGTTAAACGG+CGG | - | chr1_1:49435674-49435693 | None:intergenic | 35.0% | |
| !! | ACACGATTATGATGGGTTAT+CGG | + | chr1_1:49435883-49435902 | Msa0025810:intron | 35.0% |
| ! | TTTTTGCAAAAGTAGATCGG+TGG | + | chr1_1:49435951-49435970 | Msa0025810:intron | 35.0% |
| GATCGGTGGAAATAAAAGTT+TGG | + | chr1_1:49435965-49435984 | Msa0025810:intron | 35.0% | |
| TGACACTCTGTTTATGTATC+TGG | + | chr1_1:49436051-49436070 | Msa0025810:intron | 35.0% | |
| AACCAACGGTGAATAATATC+AGG | + | chr1_1:49436117-49436136 | Msa0025810:intron | 35.0% | |
| ! | CAAAAGAATTTGAAATGGGC+AGG | - | chr1_1:49436529-49436548 | None:intergenic | 35.0% |
| TCTTGACTTCAAAGACAACT+AGG | + | chr1_1:49436866-49436885 | Msa0025810:intron | 35.0% | |
| ACTAACTAAAGACGTATTGG+AGG | + | chr1_1:49436921-49436940 | Msa0025810:intron | 35.0% | |
| ! | TGTCTTTTAATGAGTTTGGC+CGG | - | chr1_1:49436948-49436967 | None:intergenic | 35.0% |
| TACATTGTGCTTGTGTTGAA+TGG | - | chr1_1:49421635-49421654 | None:intergenic | 35.0% | |
| GAGTATGGTTTCAAACAGCA+AGG | + | chr1_1:49416513-49416532 | Msa0025810:CDS | 40.0% | |
| ! | TGCACCATTTAAAGCTCTTC+TGG | - | chr1_1:49416610-49416629 | None:intergenic | 40.0% |
| TGTATGCGGAGTGAAGTATA+AGG | + | chr1_1:49416890-49416909 | Msa0025810:intron | 40.0% | |
| TCACACGAGCTTCTATCAAA+TGG | + | chr1_1:49417022-49417041 | Msa0025810:intron | 40.0% | |
| GAGCAAGTTCTTCCATTTGT+TGG | - | chr1_1:49417795-49417814 | None:intergenic | 40.0% | |
| CTACACATGAAGACACATGA+AGG | - | chr1_1:49418183-49418202 | None:intergenic | 40.0% | |
| CATGTGTCTTCATGTGTAGT+TGG | + | chr1_1:49418184-49418203 | Msa0025810:intron | 40.0% | |
| CACAACAGTCAATTGTTGCT+CGG | - | chr1_1:49418469-49418488 | None:intergenic | 40.0% | |
| GAGCAACAATTGACTGTTGT+GGG | + | chr1_1:49418468-49418487 | Msa0025810:intron | 40.0% | |
| ! | AGGGAGTATATCGTAAAGGT+TGG | - | chr1_1:49418548-49418567 | None:intergenic | 40.0% |
| TGCTTATAAATGTGACCGGA+GGG | - | chr1_1:49418567-49418586 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr1_1:49418568-49418587 | None:intergenic | 40.0% | |
| TTGCTTATAATTGTGACCGG+AGG | + | chr1_1:49418683-49418702 | Msa0025810:intron | 40.0% | |
| TGCTTATAATTGTGACCGGA+GGG | + | chr1_1:49418684-49418703 | Msa0025810:intron | 40.0% | |
| ! | TATAAGGTGGGAAGCGTAAT+TGG | + | chr1_1:49418722-49418741 | Msa0025810:intron | 40.0% |
| CGTAATTGGTCACTATGTGA+CGG | + | chr1_1:49418736-49418755 | Msa0025810:intron | 40.0% | |
| GTAATTGGTCACTATGTGAC+GGG | + | chr1_1:49418737-49418756 | Msa0025810:intron | 40.0% | |
| TAATTGGTCACTATGTGACG+GGG | + | chr1_1:49418738-49418757 | Msa0025810:intron | 40.0% | |
| TTGTTATAACTTACTCCCGC+CGG | + | chr1_1:49419000-49419019 | Msa0025810:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+CGG | - | chr1_1:49419134-49419153 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr1_1:49419134-49419153 | Msa0025810:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr1_1:49419135-49419154 | Msa0025810:intron | 40.0% | |
| CTAAACCCTCACAAAGTTTG+CGG | + | chr1_1:49419338-49419357 | Msa0025810:intron | 40.0% | |
| ATAAACCTTTGCCAGGGTTT+AGG | - | chr1_1:49419410-49419429 | None:intergenic | 40.0% | |
| GACAAGAATAAACCTTTGCC+AGG | - | chr1_1:49419417-49419436 | None:intergenic | 40.0% | |
| ATAGGCCTTCGGATCAAATT+AGG | - | chr1_1:49419761-49419780 | None:intergenic | 40.0% | |
| ! | AAAAGGTTGGCTCTTGAGAT+TGG | - | chr1_1:49419900-49419919 | None:intergenic | 40.0% |
| GATGTAGAAACGAGGCTTAA+AGG | - | chr1_1:49419995-49420014 | None:intergenic | 40.0% | |
| ! | AAAAGTCAAAGTGGGCTTCT+CGG | + | chr1_1:49420579-49420598 | Msa0025810:intron | 40.0% |
| TCATGCCACGTCAGATTATA+TGG | - | chr1_1:49420874-49420893 | None:intergenic | 40.0% | |
| AACAAGCTTGTAGGTGACAA+TGG | + | chr1_1:49421088-49421107 | Msa0025810:intron | 40.0% | |
| TTGTGCTTGTGTTGAATGGA+AGG | - | chr1_1:49421631-49421650 | None:intergenic | 40.0% | |
| TTACAGTTTGGCCATACACA+TGG | - | chr1_1:49421832-49421851 | None:intergenic | 40.0% | |
| GCAAGATTTCAGTGAAGAGT+TGG | + | chr1_1:49422060-49422079 | Msa0025810:CDS | 40.0% | |
| ! | AGTTGGTTCCAGAAGATGTT+AGG | + | chr1_1:49422077-49422096 | Msa0025810:CDS | 40.0% |
| ! | GTTGGTTCCAGAAGATGTTA+GGG | + | chr1_1:49422078-49422097 | Msa0025810:CDS | 40.0% |
| TATCCTTCCCTAACATCTTC+TGG | - | chr1_1:49422088-49422107 | None:intergenic | 40.0% | |
| !! | CTTTGCTGTTGTTGCAATGA+AGG | + | chr1_1:49422108-49422127 | Msa0025810:CDS | 40.0% |
| GATCAAGCTCAAGAAGAGTA+TGG | + | chr1_1:49422199-49422218 | Msa0025810:CDS | 40.0% | |
| GTAATTGTTGAGGCAGACAA+GGG | - | chr1_1:49422252-49422271 | None:intergenic | 40.0% | |
| TGTAATTGTTGAGGCAGACA+AGG | - | chr1_1:49422253-49422272 | None:intergenic | 40.0% | |
| !!! | AACTACCACCGGTTTTATAC+CGG | + | chr1_1:49422723-49422742 | Msa0025810:intron | 40.0% |
| AAATACCGGTATAAAACCGG+TGG | - | chr1_1:49422731-49422750 | None:intergenic | 40.0% | |
| TCATCGTTTGGGAATGTAGA+GGG | - | chr1_1:49422942-49422961 | None:intergenic | 40.0% | |
| ATCATCGTTTGGGAATGTAG+AGG | - | chr1_1:49422943-49422962 | None:intergenic | 40.0% | |
| GATGTGAAAAGCAATCCATG+AGG | + | chr1_1:49423099-49423118 | Msa0025810:intron | 40.0% | |
| ATAGGCAAAGATTAGGGTTG+GGG | - | chr1_1:49423190-49423209 | None:intergenic | 40.0% | |
| TGCCTATAAAAGGGTCCATT+TGG | + | chr1_1:49423203-49423222 | Msa0025810:intron | 40.0% | |
| GCCTATAAAAGGGTCCATTT+GGG | + | chr1_1:49423204-49423223 | Msa0025810:intron | 40.0% | |
| CCTATAAAAGGGTCCATTTG+GGG | + | chr1_1:49423205-49423224 | Msa0025810:intron | 40.0% | |
| CTATAAAAGGGTCCATTTGG+GGG | + | chr1_1:49423206-49423225 | Msa0025810:intron | 40.0% | |
| TATAAAAGGGTCCATTTGGG+GGG | + | chr1_1:49423207-49423226 | Msa0025810:intron | 40.0% | |
| TGTCAACACAAAGCAATGCT+GGG | - | chr1_1:49423246-49423265 | None:intergenic | 40.0% | |
| ATGTCAACACAAAGCAATGC+TGG | - | chr1_1:49423247-49423266 | None:intergenic | 40.0% | |
| !!! | TGAACTGGTTTTGCTTGATG+AGG | + | chr1_1:49423519-49423538 | Msa0025810:intron | 40.0% |
| !! | TACGGTAACGGGTAAGTATA+TGG | + | chr1_1:49423597-49423616 | Msa0025810:intron | 40.0% |
| !! | ACGGTAACGGGTAAGTATAT+GGG | + | chr1_1:49423598-49423617 | Msa0025810:intron | 40.0% |
| ACGGGTAAGTATATGGGATT+CGG | + | chr1_1:49423604-49423623 | Msa0025810:intron | 40.0% | |
| !! | ATTTTGGCACAATTCATGGG+TGG | - | chr1_1:49423908-49423927 | None:intergenic | 40.0% |
| !! | CTGCATTTTGGCACAATTCA+TGG | - | chr1_1:49423912-49423931 | None:intergenic | 40.0% |
| GTGCCAAAATGCAGATCTAA+CGG | + | chr1_1:49423918-49423937 | Msa0025810:intron | 40.0% | |
| ! | TAACGGTGCTAATTCTTTCG+TGG | + | chr1_1:49423935-49423954 | Msa0025810:intron | 40.0% |
| CGCTATATATAGCAAAGCTC+GGG | + | chr1_1:49423978-49423997 | Msa0025810:intron | 40.0% | |
| GCTATATATAGCAAAGCTCG+GGG | + | chr1_1:49423979-49423998 | Msa0025810:intron | 40.0% | |
| GTAAGGAGTCGTATATATCC+AGG | + | chr1_1:49424180-49424199 | Msa0025810:intron | 40.0% | |
| !! | TTTTCTTGCCACTTGCGATT+AGG | - | chr1_1:49424452-49424471 | None:intergenic | 40.0% |
| GTAATTCTTGAGGCCTACAA+GGG | - | chr1_1:49424856-49424875 | None:intergenic | 40.0% | |
| TGTAATTCTTGAGGCCTACA+AGG | - | chr1_1:49424857-49424876 | None:intergenic | 40.0% | |
| GTGCAGCTTGGAGTAATTAA+CGG | + | chr1_1:49424924-49424943 | Msa0025810:intron | 40.0% | |
| ! | AAGACATTGGCTGAAACCTT+CGG | + | chr1_1:49425657-49425676 | Msa0025810:intron | 40.0% |
| GCTGGATACTTATATTCCGA+AGG | - | chr1_1:49425676-49425695 | None:intergenic | 40.0% | |
| ! | GTAATTGGTCACTTTGTGAC+GGG | + | chr1_1:49425736-49425755 | Msa0025810:intron | 40.0% |
| GTGTGAAAGCGACAAATTAC+TGG | + | chr1_1:49425970-49425989 | Msa0025810:intron | 40.0% | |
| TGAAAGCGACAAATTACTGG+CGG | + | chr1_1:49425973-49425992 | Msa0025810:intron | 40.0% | |
| GGTCAATCATGATCTCGTTA+AGG | + | chr1_1:49425997-49426016 | Msa0025810:intron | 40.0% | |
| AACAAGGAATGCTGAGAGAT+TGG | - | chr1_1:49426169-49426188 | None:intergenic | 40.0% | |
| TGCAAACTTTGTGAGGGTTT+AGG | - | chr1_1:49426250-49426269 | None:intergenic | 40.0% | |
| GCTTTCTGCAAACTTTGTGA+GGG | - | chr1_1:49426256-49426275 | None:intergenic | 40.0% | |
| TGCTTTCTGCAAACTTTGTG+AGG | - | chr1_1:49426257-49426276 | None:intergenic | 40.0% | |
| GACAGTCATAAACTTTGGCA+GGG | - | chr1_1:49426321-49426340 | None:intergenic | 40.0% | |
| AGACAGTCATAAACTTTGGC+AGG | - | chr1_1:49426322-49426341 | None:intergenic | 40.0% | |
| GCCAAAGTTTATGACTGTCT+AGG | + | chr1_1:49426322-49426341 | Msa0025810:intron | 40.0% | |
| GCCTAGACAGTCATAAACTT+TGG | - | chr1_1:49426326-49426345 | None:intergenic | 40.0% | |
| !! | AAGATGGGCTGATTGTGTTT+AGG | + | chr1_1:49426542-49426561 | Msa0025810:intron | 40.0% |
| TGCCATTGTCATCTACATGT+TGG | - | chr1_1:49426956-49426975 | None:intergenic | 40.0% | |
| TCTTTCTAAATGGACCGTGA+TGG | + | chr1_1:49427258-49427277 | Msa0025810:intron | 40.0% | |
| CTTTCTAAATGGACCGTGAT+GGG | + | chr1_1:49427259-49427278 | Msa0025810:intron | 40.0% | |
| TCTCATTGGGCTTAGCTAAA+TGG | - | chr1_1:49427290-49427309 | None:intergenic | 40.0% | |
| ATTTAGCTAAGCCCAATGAG+AGG | + | chr1_1:49427289-49427308 | Msa0025810:intron | 40.0% | |
| TTAAACGTCATCCCATCAGA+CGG | + | chr1_1:49427337-49427356 | Msa0025810:intron | 40.0% | |
| GGTGAAAACCTAAAGCTAGA+CGG | + | chr1_1:49427380-49427399 | Msa0025810:intron | 40.0% | |
| CAACGCTAACAACTATGTGA+GGG | - | chr1_1:49427421-49427440 | None:intergenic | 40.0% | |
| ACAACGCTAACAACTATGTG+AGG | - | chr1_1:49427422-49427441 | None:intergenic | 40.0% | |
| AACTATCCTTCACGCATTTC+TGG | + | chr1_1:49428249-49428268 | Msa0025810:intron | 40.0% | |
| ! | TCCCTTTGTTATGTGAGTGA+CGG | + | chr1_1:49430665-49430684 | Msa0025810:intron | 40.0% |
| TCCGTCACTCACATAACAAA+GGG | - | chr1_1:49430669-49430688 | None:intergenic | 40.0% | |
| TTAACACAAGTGGTAACTCG+AGG | - | chr1_1:49431500-49431519 | None:intergenic | 40.0% | |
| ! | GTCACGCTTTTGCTAAAACT+TGG | + | chr1_1:49432272-49432291 | Msa0025810:intron | 40.0% |
| CTGCAGAAATTGAATCCGAT+AGG | - | chr1_1:49432649-49432668 | None:intergenic | 40.0% | |
| TAATCCAACAATCTCCCACT+TGG | - | chr1_1:49432789-49432808 | None:intergenic | 40.0% | |
| TCTTTCTAAATGGACCGTGA+TGG | + | chr1_1:49427258-49427277 | Msa0025810:intron | 40.0% | |
| CTTTCTAAATGGACCGTGAT+GGG | + | chr1_1:49427259-49427278 | Msa0025810:intron | 40.0% | |
| TCTCATTGGGCTTAGCTAAA+TGG | - | chr1_1:49427290-49427309 | None:intergenic | 40.0% | |
| ATTTAGCTAAGCCCAATGAG+AGG | + | chr1_1:49427289-49427308 | Msa0025810:intron | 40.0% | |
| TTAAACGTCATCCCATCAGA+CGG | + | chr1_1:49427337-49427356 | Msa0025810:intron | 40.0% | |
| GGTGAAAACCTAAAGCTAGA+CGG | + | chr1_1:49427380-49427399 | Msa0025810:intron | 40.0% | |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | + | chr1_1:49433304-49433323 | Msa0025810:intron | 40.0% |
| ! | TTTTGGTCAAGTAGCCTAGT+GGG | + | chr1_1:49433305-49433324 | Msa0025810:intron | 40.0% |
| ! | TATGAAGAAGTGGAGAGTAC+AGG | + | chr1_1:49433348-49433367 | Msa0025810:intron | 40.0% |
| AATCCACCTAAATTGACACC+GGG | + | chr1_1:49433483-49433502 | Msa0025810:intron | 40.0% | |
| CCTGGCCTATTTAACTAAAC+AGG | - | chr1_1:49433658-49433677 | None:intergenic | 40.0% | |
| CCTGTTTAGTTAAATAGGCC+AGG | + | chr1_1:49433655-49433674 | Msa0025810:intron | 40.0% | |
| TAGTTAAATAGGCCAGGCTT+AGG | + | chr1_1:49433661-49433680 | Msa0025810:intron | 40.0% | |
| !!! | CTATCATAGGCCGTTTTTCT+GGG | - | chr1_1:49434019-49434038 | None:intergenic | 40.0% |
| TTGTGCTTGTGTTGAATGGA+AGG | - | chr1_1:49421631-49421650 | None:intergenic | 40.0% | |
| AATGCCATTGCCATATGTGT+AGG | + | chr1_1:49434522-49434541 | Msa0025810:intron | 40.0% | |
| ACAGTTTGGTCCTACACATA+TGG | - | chr1_1:49434535-49434554 | None:intergenic | 40.0% | |
| ATTAACGCGTAGTCACAGTT+TGG | - | chr1_1:49434549-49434568 | None:intergenic | 40.0% | |
| GCAAGATTTCAGTGAAGAGT+TGG | + | chr1_1:49422060-49422079 | Msa0025810:CDS | 40.0% | |
| TATCCTTCCCTAACATCTTC+TGG | - | chr1_1:49422088-49422107 | None:intergenic | 40.0% | |
| CTTGAGTGATCCTGAATTCT+TGG | + | chr1_1:49434861-49434880 | Msa0025810:CDS | 40.0% | |
| TCAAGTAGTCCCAAGAATTC+AGG | - | chr1_1:49434874-49434893 | None:intergenic | 40.0% | |
| GATCAAGCTCAAGAAGAGTA+TGG | + | chr1_1:49422199-49422218 | Msa0025810:CDS | 40.0% | |
| GTAATTCATGAGGCAGACAA+GGG | - | chr1_1:49434945-49434964 | None:intergenic | 40.0% | |
| TGTAATTCATGAGGCAGACA+AGG | - | chr1_1:49434946-49434965 | None:intergenic | 40.0% | |
| CCACTTACTCACCTTGAAAA+AGG | - | chr1_1:49435210-49435229 | None:intergenic | 40.0% | |
| !!! | CCTTTTTCAAGGTGAGTAAG+TGG | + | chr1_1:49435207-49435226 | Msa0025810:intron | 40.0% |
| TGAACTTAGCTCACTTGGTA+AGG | - | chr1_1:49435277-49435296 | None:intergenic | 40.0% | |
| TACCAAGTGAGCTAAGTTCA+CGG | + | chr1_1:49435277-49435296 | Msa0025810:intron | 40.0% | |
| TACAAGACATAAGGTACGCA+AGG | - | chr1_1:49435579-49435598 | None:intergenic | 40.0% | |
| GATTTGTGGTTTCAGATTGG+TGG | - | chr1_1:49435715-49435734 | None:intergenic | 40.0% | |
| GTGGATTTGTGGTTTCAGAT+TGG | - | chr1_1:49435718-49435737 | None:intergenic | 40.0% | |
| ! | GAAACCAAGGTAGTGGTTAA+GGG | - | chr1_1:49435743-49435762 | None:intergenic | 40.0% |
| ! | AGAAACCAAGGTAGTGGTTA+AGG | - | chr1_1:49435744-49435763 | None:intergenic | 40.0% |
| ATATGGAGAAACCAAGGTAG+TGG | - | chr1_1:49435750-49435769 | None:intergenic | 40.0% | |
| !! | TTATGATGGGTTATCGGAAG+TGG | + | chr1_1:49435889-49435908 | Msa0025810:intron | 40.0% |
| !! | TATGATGGGTTATCGGAAGT+GGG | + | chr1_1:49435890-49435909 | Msa0025810:intron | 40.0% |
| !!! | CTTTTGGGATCAGCACTAAT+AGG | - | chr1_1:49436082-49436101 | None:intergenic | 40.0% |
| CTCCTGATATTATTCACCGT+TGG | - | chr1_1:49436122-49436141 | None:intergenic | 40.0% | |
| ACGGTGAATAATATCAGGAG+TGG | + | chr1_1:49436122-49436141 | Msa0025810:intron | 40.0% | |
| !! | TCAGGAGTGGATTATCATCT+AGG | + | chr1_1:49436135-49436154 | Msa0025810:intron | 40.0% |
| TTGCTTCTTCCGACCATAAT+CGG | + | chr1_1:49436220-49436239 | Msa0025810:intron | 40.0% | |
| AAACGTTTCCCGATTATGGT+CGG | - | chr1_1:49436232-49436251 | None:intergenic | 40.0% | |
| AACAAGGATTGTCTTCTTCC+AGG | + | chr1_1:49436677-49436696 | Msa0025810:intron | 40.0% | |
| CTAACTACTACACCAAGTCA+TGG | + | chr1_1:49436717-49436736 | Msa0025810:intron | 40.0% | |
| ACAATAGGGAAACCATGACT+TGG | - | chr1_1:49436732-49436751 | None:intergenic | 40.0% | |
| AAATATACTCGTGGCTGCTA+AGG | + | chr1_1:49437084-49437103 | Msa0025810:intron | 40.0% | |
| TTGTGCTTGTGTTGAATGGA+AGG | - | chr1_1:49421631-49421650 | None:intergenic | 40.0% | |
| CAAGCTGCTTGTATCTTTAG+AGG | - | chr1_1:49437204-49437223 | None:intergenic | 40.0% | |
| ! | CTCTAAAGATACAAGCAGCT+TGG | + | chr1_1:49437202-49437221 | Msa0025810:intron | 40.0% |
| ATGCCATATTGCCATGTCTA+TGG | + | chr1_1:49437286-49437305 | Msa0025810:intron | 40.0% | |
| AAGCCATAGACATGGCAATA+TGG | - | chr1_1:49437292-49437311 | None:intergenic | 40.0% | |
| ATGAATGTGTAGTTACCGTG+TGG | - | chr1_1:49437321-49437340 | None:intergenic | 40.0% | |
| GCTGTGGTTGCAATCAAAGA+TGG | + | chr1_1:49416411-49416430 | Msa0025810:CDS | 45.0% | |
| TGGGATTACTTGACCAAGCT+AGG | + | chr1_1:49416487-49416506 | Msa0025810:CDS | 45.0% | |
| GGGATTACTTGACCAAGCTA+GGG | + | chr1_1:49416488-49416507 | Msa0025810:CDS | 45.0% | |
| AACCATACTCTTCCCTAGCT+TGG | - | chr1_1:49416503-49416522 | None:intergenic | 45.0% | |
| GAATTCTTGCAGTCCCTTGT+GGG | + | chr1_1:49416535-49416554 | Msa0025810:intron | 45.0% | |
| GTAATTCTTGAGGCCCACAA+GGG | - | chr1_1:49416551-49416570 | None:intergenic | 45.0% | |
| TGTAATTCTTGAGGCCCACA+AGG | - | chr1_1:49416552-49416571 | None:intergenic | 45.0% | |
| GGGGAGAGAGAAATGATATG+TGG | - | chr1_1:49417105-49417124 | None:intergenic | 45.0% | |
| TCAACCATCTACTGCAAGCA+TGG | - | chr1_1:49417992-49418011 | None:intergenic | 45.0% | |
| !! | CTTCATGTGTAGTTGGTGAC+TGG | + | chr1_1:49418191-49418210 | Msa0025810:intron | 45.0% |
| !!! | ACTGGTGAGCAAGTTTTGAG+TGG | + | chr1_1:49418209-49418228 | Msa0025810:intron | 45.0% |
| CGAGCAACAATTGACTGTTG+TGG | + | chr1_1:49418467-49418486 | Msa0025810:intron | 45.0% | |
| ! | CGAAAATTTGCTCCCACACA+CGG | - | chr1_1:49418513-49418532 | None:intergenic | 45.0% |
| ! | CGTGTGTGGGAGCAAATTTT+CGG | + | chr1_1:49418511-49418530 | Msa0025810:intron | 45.0% |
| CCTTTACGATATACTCCCTC+CGG | + | chr1_1:49418549-49418568 | Msa0025810:intron | 45.0% | |
| TGAATGCGGAAAATTGCCGA+CGG | + | chr1_1:49418945-49418964 | Msa0025810:intron | 45.0% | |
| TGCTTATAATAGTGACCGGC+GGG | - | chr1_1:49419018-49419037 | None:intergenic | 45.0% | |
| CGCAAACTTTGTGAGGGTTT+AGG | - | chr1_1:49419340-49419359 | None:intergenic | 45.0% | |
| ATTTATGGCAGCCTAAACCC+TGG | + | chr1_1:49419396-49419415 | Msa0025810:intron | 45.0% | |
| TTTATTCTTGTCTAGGCGCC+TGG | + | chr1_1:49419425-49419444 | Msa0025810:intron | 45.0% | |
| CGCTACACGATACTCTTAAG+TGG | - | chr1_1:49419716-49419735 | None:intergenic | 45.0% | |
| GGCAAGTCAACTGCAAATTG+AGG | + | chr1_1:49420151-49420170 | Msa0025810:intron | 45.0% | |
| TGAGAAGAGAGAGAATCCAG+CGG | + | chr1_1:49420210-49420229 | Msa0025810:intron | 45.0% | |
| TCAACGAATTCGTTGACACC+TGG | + | chr1_1:49420336-49420355 | Msa0025810:intron | 45.0% | |
| ! | TGCATGTATCTTTAGAGGGG+TGG | - | chr1_1:49421725-49421744 | None:intergenic | 45.0% |
| GAATGCCATTGCCATGTGTA+TGG | + | chr1_1:49421818-49421837 | Msa0025810:intron | 45.0% | |
| TTTGGCCATACACATGGCAA+TGG | - | chr1_1:49421826-49421845 | None:intergenic | 45.0% | |
| GTTCCAGAAGATGTTAGGGA+AGG | + | chr1_1:49422082-49422101 | Msa0025810:CDS | 45.0% | |
| GCTGTTGTTGCAATGAAGGA+TGG | + | chr1_1:49422112-49422131 | Msa0025810:CDS | 45.0% | |
| TGGAGGATCCTCGACAATAA+CGG | - | chr1_1:49422979-49422998 | None:intergenic | 45.0% | |
| ACTTGGACCAAAGGGAAATG+TGG | + | chr1_1:49423035-49423054 | Msa0025810:intron | 45.0% | |
| ATTCTGGCCACATTTCCCTT+TGG | - | chr1_1:49423045-49423064 | None:intergenic | 45.0% | |
| AGTCAAGGGGTTGCAAGATA+AGG | + | chr1_1:49423074-49423093 | Msa0025810:intron | 45.0% | |
| ! | CCCCAAATGGACCCTTTTAT+AGG | - | chr1_1:49423208-49423227 | None:intergenic | 45.0% |
| GTCAACACAAAGCAATGCTG+GGG | - | chr1_1:49423245-49423264 | None:intergenic | 45.0% | |
| CGGGTAAGTATATGGGATTC+GGG | + | chr1_1:49423605-49423624 | Msa0025810:intron | 45.0% | |
| GGGTAAGTATATGGGATTCG+GGG | + | chr1_1:49423606-49423625 | Msa0025810:intron | 45.0% | |
| CTTGCATGTAGTACGTTTCG+TGG | - | chr1_1:49423849-49423868 | None:intergenic | 45.0% | |
| ! | GCACCGTTAGATCTGCATTT+TGG | - | chr1_1:49423924-49423943 | None:intergenic | 45.0% |
| !! | GGCCAATAATTTGTTGTCCC+TGG | - | chr1_1:49424201-49424220 | None:intergenic | 45.0% |
| TGGCAATACCTAATCGCAAG+TGG | + | chr1_1:49424441-49424460 | Msa0025810:intron | 45.0% | |
| GCTGTGGTTGCAATCAAAGA+TGG | + | chr1_1:49416411-49416430 | Msa0025810:CDS | 45.0% | |
| GGGATTACTTGACCAAGCTA+AGG | + | chr1_1:49416488-49416507 | Msa0025810:CDS | 45.0% | |
| ACTTGACCAAGCTAAGGAAG+AGG | + | chr1_1:49424799-49424818 | Msa0025810:CDS | 45.0% | |
| AACCATCCTCTTCCTTAGCT+TGG | - | chr1_1:49424808-49424827 | None:intergenic | 45.0% | |
| !!! | GAGGATGGTTTTAGACAGCA+AGG | + | chr1_1:49424818-49424837 | Msa0025810:CDS | 45.0% |
| GAATTCTTGCAGTCCCTTGT+AGG | + | chr1_1:49416535-49416554 | Msa0025810:intron | 45.0% | |
| TGATCATGATCGGACAATCG+AGG | + | chr1_1:49425937-49425956 | Msa0025810:intron | 45.0% | |
| ATCAAATTGCTCGACGCCTA+CGG | - | chr1_1:49426766-49426785 | None:intergenic | 45.0% | |
| GAGTCCAACATTGGATGAGA+CGG | - | chr1_1:49427003-49427022 | None:intergenic | 45.0% | |
| GCGTGTTAAGAGTCCAACAT+TGG | - | chr1_1:49427012-49427031 | None:intergenic | 45.0% | |
| CTAAATGGTCCAACCCATCA+CGG | - | chr1_1:49427275-49427294 | None:intergenic | 45.0% | |
| ACCTAAAGCTAGACGGAATG+AGG | + | chr1_1:49427387-49427406 | Msa0025810:intron | 45.0% | |
| CCTAAAGCTAGACGGAATGA+GGG | + | chr1_1:49427388-49427407 | Msa0025810:intron | 45.0% | |
| GAATCCAATCAGGTCAATCG+CGG | + | chr1_1:49428147-49428166 | Msa0025810:intron | 45.0% | |
| TGGTGACAGTCATACCCTAT+CGG | + | chr1_1:49430347-49430366 | Msa0025810:intron | 45.0% | |
| GTCCGTCACTCACATAACAA+AGG | - | chr1_1:49430670-49430689 | None:intergenic | 45.0% | |
| TAAGTAACGCCACACCGATA+GGG | - | chr1_1:49430696-49430715 | None:intergenic | 45.0% | |
| TTAAGTAACGCCACACCGAT+AGG | - | chr1_1:49430697-49430716 | None:intergenic | 45.0% | |
| !! | ACGTGATGGACATACCCTAT+CGG | + | chr1_1:49430838-49430857 | Msa0025810:intron | 45.0% |
| TCATCCAAGTGGGAGATTGT+TGG | + | chr1_1:49432782-49432801 | Msa0025810:intron | 45.0% | |
| CTAAATGGTCCAACCCATCA+CGG | - | chr1_1:49427275-49427294 | None:intergenic | 45.0% | |
| ACCTAAAGCTAGACGGAATG+AGG | + | chr1_1:49427387-49427406 | Msa0025810:intron | 45.0% | |
| CCTAAAGCTAGACGGAATGA+GGG | + | chr1_1:49427388-49427407 | Msa0025810:intron | 45.0% | |
| CAACGCTGACAACTATGAGA+GGG | - | chr1_1:49433094-49433113 | None:intergenic | 45.0% | |
| ACAACGCTGACAACTATGAG+AGG | - | chr1_1:49433095-49433114 | None:intergenic | 45.0% | |
| ATCCACCTAAATTGACACCG+GGG | + | chr1_1:49433484-49433503 | Msa0025810:intron | 45.0% | |
| ! | ATTCTCCCCGGTGTCAATTT+AGG | - | chr1_1:49433492-49433511 | None:intergenic | 45.0% |
| GAATCGATCCCAATACCTCA+AGG | + | chr1_1:49433508-49433527 | Msa0025810:intron | 45.0% | |
| !! | CTTTTCTGAAAGCCTAAGCC+TGG | - | chr1_1:49433676-49433695 | None:intergenic | 45.0% |
| ! | GCCAGTCCAGGCTTTTAAAT+AGG | + | chr1_1:49433983-49434002 | Msa0025810:intron | 45.0% |
| GCCTATTTAAAAGCCTGGAC+TGG | - | chr1_1:49433987-49434006 | None:intergenic | 45.0% | |
| ! | TCCAGGCTTTTAAATAGGCC+AGG | + | chr1_1:49433988-49434007 | Msa0025810:intron | 45.0% |
| !!! | CCTATCATAGGCCGTTTTTC+TGG | - | chr1_1:49434020-49434039 | None:intergenic | 45.0% |
| CCAGAAAAACGGCCTATGAT+AGG | + | chr1_1:49434017-49434036 | Msa0025810:intron | 45.0% | |
| AAAATTTACAGGCCTGAGCC+TGG | - | chr1_1:49434050-49434069 | None:intergenic | 45.0% | |
| ACGCGGTGTGTATCTTTAGA+GGG | - | chr1_1:49434443-49434462 | None:intergenic | 45.0% | |
| AACGCGGTGTGTATCTTTAG+AGG | - | chr1_1:49434444-49434463 | None:intergenic | 45.0% | |
| TGGTCCTACACATATGGCAA+TGG | - | chr1_1:49434529-49434548 | None:intergenic | 45.0% | |
| !! | AGTTGGTGCCAGAAGATGTT+AGG | + | chr1_1:49434770-49434789 | Msa0025810:CDS | 45.0% |
| !! | GTTGGTGCCAGAAGATGTTA+GGG | + | chr1_1:49434771-49434790 | Msa0025810:CDS | 45.0% |
| GCTGTTGTTGCAATGAAGGA+TGG | + | chr1_1:49422112-49422131 | Msa0025810:CDS | 45.0% | |
| ACCAAGTGAGCTAAGTTCAC+GGG | + | chr1_1:49435278-49435297 | Msa0025810:intron | 45.0% | |
| AAGTCATTGTTAAACGGCGG+TGG | - | chr1_1:49435671-49435690 | None:intergenic | 45.0% | |
| TGGGATCAGCACTAATAGGA+AGG | - | chr1_1:49436078-49436097 | None:intergenic | 45.0% | |
| TGCTTCTTCCGACCATAATC+GGG | + | chr1_1:49436221-49436240 | Msa0025810:intron | 45.0% | |
| GAAAAAAGGAAAGGCGGCAA+TGG | + | chr1_1:49436485-49436504 | Msa0025810:intron | 45.0% | |
| TTGAAATGGGCAGGAGATTG+AGG | - | chr1_1:49436520-49436539 | None:intergenic | 45.0% | |
| GATTGTCTTCTTCCAGGTCA+TGG | + | chr1_1:49436683-49436702 | Msa0025810:intron | 45.0% | |
| GAATTTAGCAGACCATGACC+TGG | - | chr1_1:49436698-49436717 | None:intergenic | 45.0% | |
| GTCATGGTTTCCCTATTGTC+AGG | + | chr1_1:49436733-49436752 | Msa0025810:intron | 45.0% | |
| CTAAAGACGTATTGGAGGAC+CGG | + | chr1_1:49436926-49436945 | Msa0025810:intron | 45.0% | |
| AGCACAATGTACCACACTCT+TGG | + | chr1_1:49421644-49421663 | Msa0025810:intron | 45.0% | |
| GGTTGTAGAAGCCATAGACA+TGG | - | chr1_1:49437300-49437319 | None:intergenic | 45.0% | |
| CTATGGCTTCTACAACCACA+CGG | + | chr1_1:49437303-49437322 | Msa0025810:intron | 45.0% | |
| !!! | TATTAAGTTTTTATTTTTTT+TGG | - | chr1_1:49417079-49417098 | None:intergenic | 5.0% |
| !! | ATTAAAATAGAATATAATTT+GGG | - | chr1_1:49423163-49423182 | None:intergenic | 5.0% |
| !! | AATTAAAATAGAATATAATT+TGG | - | chr1_1:49423164-49423183 | None:intergenic | 5.0% |
| !! | ATTATTTAATTAATCAATTA+TGG | + | chr1_1:49427136-49427155 | Msa0025810:intron | 5.0% |
| !!! | AAGAATATAATAAATAATTT+TGG | - | chr1_1:49428308-49428327 | None:intergenic | 5.0% |
| !!! | TTATTATATTCTTATTATTT+TGG | + | chr1_1:49428315-49428334 | Msa0025810:intron | 5.0% |
| !! | AAATTTAAATTAACTATATT+TGG | - | chr1_1:49429048-49429067 | None:intergenic | 5.0% |
| !!! | AATTTAAAATTTAGAATTAT+AGG | - | chr1_1:49432717-49432736 | None:intergenic | 5.0% |
| !! | ATTATTTAATTAATCAATTA+TGG | + | chr1_1:49427136-49427155 | Msa0025810:intron | 5.0% |
| !!! | TTTTAATAAATAGTATTAAT+AGG | - | chr1_1:49433721-49433740 | None:intergenic | 5.0% |
| GACCAAGCTAGGGAAGAGTA+TGG | + | chr1_1:49416498-49416517 | Msa0025810:CDS | 50.0% | |
| GGAATTCTTGCAGTCCCTTG+TGG | + | chr1_1:49416534-49416553 | Msa0025810:intron | 50.0% | |
| !! | GAGCTTTAAATGGTGCAGCG+TGG | + | chr1_1:49416613-49416632 | Msa0025810:intron | 50.0% |
| ACCATCTTCTGCAAGCTTGC+AGG | + | chr1_1:49417317-49417336 | Msa0025810:intron | 50.0% | |
| ACCTGCAAGCTTGCAGAAGA+TGG | - | chr1_1:49417321-49417340 | None:intergenic | 50.0% | |
| ! | AGCTTGCAGGTTTTGCAGCA+TGG | + | chr1_1:49417330-49417349 | Msa0025810:intron | 50.0% |
| CAGACCATGCTTGCAGTAGA+TGG | + | chr1_1:49417985-49418004 | Msa0025810:intron | 50.0% | |
| AGTGGCAATTAACTGCCGCT+GGG | - | chr1_1:49418427-49418446 | None:intergenic | 50.0% | |
| GAATGTCGTTGTGAAGCGAG+TGG | - | chr1_1:49418445-49418464 | None:intergenic | 50.0% | |
| ! | CCGGAGGGAGTATATCGTAA+AGG | - | chr1_1:49418552-49418571 | None:intergenic | 50.0% |
| GACGCGTGACTATGTGAATG+CGG | + | chr1_1:49418931-49418950 | Msa0025810:intron | 50.0% | |
| AGATCATGATTGACCGCCGT+CGG | - | chr1_1:49418964-49418983 | None:intergenic | 50.0% | |
| CGCTAAACATGTACTCCCTC+CGG | - | chr1_1:49419153-49419172 | None:intergenic | 50.0% | |
| GACGACCGCAAACTTTGTGA+GGG | - | chr1_1:49419346-49419365 | None:intergenic | 50.0% | |
| TGACGACCGCAAACTTTGTG+AGG | - | chr1_1:49419347-49419366 | None:intergenic | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | - | chr1_1:49419623-49419642 | None:intergenic | 50.0% | |
| ! | TCGTTGACACCTGGTGTCAA+CGG | + | chr1_1:49420345-49420364 | Msa0025810:intron | 50.0% |
| CATGTCAGATAGTGTCCTGC+TGG | + | chr1_1:49420670-49420689 | Msa0025810:intron | 50.0% | |
| CACTCCAGATGTCCAGTCTT+CGG | - | chr1_1:49421184-49421203 | None:intergenic | 50.0% | |
| TTTCGGCTATTGGACCACGA+GGG | - | chr1_1:49421210-49421229 | None:intergenic | 50.0% | |
| TGGTCAAATAACCTAGCGGG+AGG | + | chr1_1:49421319-49421338 | Msa0025810:intron | 50.0% | |
| GGTCAAATAACCTAGCGGGA+GGG | + | chr1_1:49421320-49421339 | Msa0025810:intron | 50.0% | |
| GTCAAATAACCTAGCGGGAG+GGG | + | chr1_1:49421321-49421340 | Msa0025810:intron | 50.0% | |
| GTAGAGGGTGGGTGATACAT+AGG | - | chr1_1:49422927-49422946 | None:intergenic | 50.0% | |
| CGTTTGGGAATGTAGAGGGT+GGG | - | chr1_1:49422938-49422957 | None:intergenic | 50.0% | |
| TCGTTTGGGAATGTAGAGGG+TGG | - | chr1_1:49422939-49422958 | None:intergenic | 50.0% | |
| TCCTCAACCCGTTATTGTCG+AGG | + | chr1_1:49422968-49422987 | Msa0025810:intron | 50.0% | |
| !! | TCCTCGACAATAACGGGTTG+AGG | - | chr1_1:49422972-49422991 | None:intergenic | 50.0% |
| GGAGGATCCTCGACAATAAC+GGG | - | chr1_1:49422978-49422997 | None:intergenic | 50.0% | |
| !!! | CTGGTTTTGCTTGATGAGGC+TGG | + | chr1_1:49423523-49423542 | Msa0025810:intron | 50.0% |
| !! | GGGTGGTGGGCAAAATACAT+GGG | - | chr1_1:49423891-49423910 | None:intergenic | 50.0% |
| !! | TGGGTGGTGGGCAAAATACA+TGG | - | chr1_1:49423892-49423911 | None:intergenic | 50.0% |
| TGGCACAATTCATGGGTGGT+GGG | - | chr1_1:49423904-49423923 | None:intergenic | 50.0% | |
| TTGGCACAATTCATGGGTGG+TGG | - | chr1_1:49423905-49423924 | None:intergenic | 50.0% | |
| GACCAAGCTAAGGAAGAGGA+TGG | + | chr1_1:49424803-49424822 | Msa0025810:CDS | 50.0% | |
| GAGCATCAAATGGTGCAGCT+TGG | + | chr1_1:49424912-49424931 | Msa0025810:intron | 50.0% | |
| GAGCGACAGTCAATTGACGT+TGG | + | chr1_1:49425132-49425151 | Msa0025810:intron | 50.0% | |
| TTAGTCTCTGCAGTTGCACG+CGG | - | chr1_1:49425548-49425567 | None:intergenic | 50.0% | |
| ACTCTTGGGACAATGCTCGA+GGG | - | chr1_1:49425572-49425591 | None:intergenic | 50.0% | |
| AACTCTTGGGACAATGCTCG+AGG | - | chr1_1:49425573-49425592 | None:intergenic | 50.0% | |
| AAGCGACAAATTACTGGCGG+CGG | + | chr1_1:49425976-49425995 | Msa0025810:intron | 50.0% | |
| CAGACCGTCTCATCCAATGT+TGG | + | chr1_1:49426996-49427015 | Msa0025810:intron | 50.0% | |
| TTTCGGCTATTGGACCACGA+GGG | - | chr1_1:49421210-49421229 | None:intergenic | 50.0% | |
| !! | CTAAATGGACCGTGATGGGT+TGG | + | chr1_1:49427263-49427282 | Msa0025810:intron | 50.0% |
| AATAGCTAAACGGCTGAGGG+CGG | - | chr1_1:49427318-49427337 | None:intergenic | 50.0% | |
| !! | CCCTCATTCCGTCTAGCTTT+AGG | - | chr1_1:49427391-49427410 | None:intergenic | 50.0% |
| GATGAATGTCACACTCTCCG+AGG | + | chr1_1:49429773-49429792 | Msa0025810:intron | 50.0% | |
| !! | GAGTGACGGACATACCCTAT+CGG | + | chr1_1:49430679-49430698 | Msa0025810:intron | 50.0% |
| !! | CTAAATGGACCGTGATGGGT+TGG | + | chr1_1:49427263-49427282 | Msa0025810:intron | 50.0% |
| AATAGCTAAACGGCTGAGGG+CGG | - | chr1_1:49427318-49427337 | None:intergenic | 50.0% | |
| !! | CCCTCATTCCGTCTAGCTTT+AGG | - | chr1_1:49427391-49427410 | None:intergenic | 50.0% |
| ! | GTATTGGGATCGATTCTCCC+CGG | - | chr1_1:49433504-49433523 | None:intergenic | 50.0% |
| TCGATCCCAATACCTCAAGG+AGG | + | chr1_1:49433511-49433530 | Msa0025810:intron | 50.0% | |
| ! | GTGGTCCTCCTTGAGGTATT+GGG | - | chr1_1:49433519-49433538 | None:intergenic | 50.0% |
| TGTGGTCCTCCTTGAGGTAT+TGG | - | chr1_1:49433520-49433539 | None:intergenic | 50.0% | |
| AATACCTCAAGGAGGACCAC+AGG | + | chr1_1:49433519-49433538 | Msa0025810:intron | 50.0% | |
| CCTAGGCCTATCTACGAAAC+AGG | - | chr1_1:49433617-49433636 | None:intergenic | 50.0% | |
| CCTGTTTCGTAGATAGGCCT+AGG | + | chr1_1:49433614-49433633 | Msa0025810:intron | 50.0% | |
| TCGTAGATAGGCCTAGGCTT+AGG | + | chr1_1:49433620-49433639 | Msa0025810:intron | 50.0% | |
| GCCTGTTAAGCCTAATAGGC+TGG | + | chr1_1:49433695-49433714 | Msa0025810:intron | 50.0% | |
| GCCAGCCTATTAGGCTTAAC+AGG | - | chr1_1:49433699-49433718 | None:intergenic | 50.0% | |
| AGGCCTGTAAGTAGGCTTTC+AGG | + | chr1_1:49433961-49433980 | Msa0025810:intron | 50.0% | |
| TGGCCTGAAAGCCTACTTAC+AGG | - | chr1_1:49433967-49433986 | None:intergenic | 50.0% | |
| GCCTGGCCTATTTAAAAGCC+TGG | - | chr1_1:49433992-49434011 | None:intergenic | 50.0% | |
| ! | GCTTTTAAATAGGCCAGGCC+AGG | + | chr1_1:49433993-49434012 | Msa0025810:intron | 50.0% |
| AACGGCCTATGATAGGCCAT+AGG | + | chr1_1:49434024-49434043 | Msa0025810:intron | 50.0% | |
| !!! | TTTTTTCGTAGGCCAGGCTC+AGG | + | chr1_1:49434066-49434085 | Msa0025810:intron | 50.0% |
| ! | GGTGTGTATCTTTAGAGGGG+TGG | - | chr1_1:49434439-49434458 | None:intergenic | 50.0% |
| ! | CGCGGTGTGTATCTTTAGAG+GGG | - | chr1_1:49434442-49434461 | None:intergenic | 50.0% |
| GTGCCAGAAGATGTTAGGGA+AGG | + | chr1_1:49434775-49434794 | Msa0025810:CDS | 50.0% | |
| ACCCGTGAACTTAGCTCACT+TGG | - | chr1_1:49435282-49435301 | None:intergenic | 50.0% | |
| !! | TCAGATTGGTGGCGTGAAGT+TGG | - | chr1_1:49435704-49435723 | None:intergenic | 50.0% |
| !! | GGTTAAGGGTGGTGGATTTG+TGG | - | chr1_1:49435729-49435748 | None:intergenic | 50.0% |
| ! | AAGGTAGTGGTTAAGGGTGG+TGG | - | chr1_1:49435737-49435756 | None:intergenic | 50.0% |
| ACCACCCTTAACCACTACCT+TGG | + | chr1_1:49435736-49435755 | Msa0025810:intron | 50.0% | |
| ! | ACCAAGGTAGTGGTTAAGGG+TGG | - | chr1_1:49435740-49435759 | None:intergenic | 50.0% |
| TGGCAATTAACTGCCGCTGG+GGG | - | chr1_1:49418425-49418444 | None:intergenic | 55.0% | |
| GTGGCAATTAACTGCCGCTG+GGG | - | chr1_1:49418426-49418445 | None:intergenic | 55.0% | |
| GAGTGGCAATTAACTGCCGC+TGG | - | chr1_1:49418428-49418447 | None:intergenic | 55.0% | |
| ! | TGGTCACTATGTGACGGGGA+TGG | + | chr1_1:49418742-49418761 | Msa0025810:intron | 55.0% |
| CATAGTCACGCGTCCTCGAT+CGG | - | chr1_1:49418925-49418944 | None:intergenic | 55.0% | |
| ATGCGGAAAATTGCCGACGG+CGG | + | chr1_1:49418948-49418967 | Msa0025810:intron | 55.0% | |
| GTTTGCGGTCGTCAAAGCAG+CGG | + | chr1_1:49419353-49419372 | Msa0025810:intron | 55.0% | |
| AGACAGGATCCGTTGACACC+AGG | + | chr1_1:49419602-49419621 | Msa0025810:intron | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | - | chr1_1:49419614-49419633 | None:intergenic | 55.0% |
| CCGTTGACACCAGGTGTCAA+CGG | + | chr1_1:49419611-49419630 | Msa0025810:intron | 55.0% | |
| AGTCAGGATCCGTTGACACC+AGG | - | chr1_1:49420357-49420376 | None:intergenic | 55.0% | |
| GTCAGATAGTGTCCTGCTGG+TGG | + | chr1_1:49420673-49420692 | Msa0025810:intron | 55.0% | |
| !!! | TTTTAGAGCGGTCCACCAGC+AGG | - | chr1_1:49420688-49420707 | None:intergenic | 55.0% |
| ACACACCTCACACCGAAGAC+TGG | + | chr1_1:49421169-49421188 | Msa0025810:intron | 55.0% | |
| ! | GATGTCCAGTCTTCGGTGTG+AGG | - | chr1_1:49421177-49421196 | None:intergenic | 55.0% |
| CACACCGAAGACTGGACATC+TGG | + | chr1_1:49421177-49421196 | Msa0025810:intron | 55.0% | |
| GTTTCGGCTATTGGACCACG+AGG | - | chr1_1:49421211-49421230 | None:intergenic | 55.0% | |
| ACTGTAGTAAACTGCCGCGC+AGG | + | chr1_1:49422680-49422699 | Msa0025810:intron | 55.0% | |
| CTGTAGTAAACTGCCGCGCA+GGG | + | chr1_1:49422681-49422700 | Msa0025810:intron | 55.0% | |
| CGTTCGCTTATTTCCCTGCG+CGG | - | chr1_1:49422697-49422716 | None:intergenic | 55.0% | |
| CGCGCAGGGAAATAAGCGAA+CGG | + | chr1_1:49422695-49422714 | Msa0025810:intron | 55.0% | |
| GCAGGGAAATAAGCGAACGG+AGG | + | chr1_1:49422698-49422717 | Msa0025810:intron | 55.0% | |
| GAACGGAGGTCAACTACCAC+CGG | + | chr1_1:49422712-49422731 | Msa0025810:intron | 55.0% | |
| GGGCTCATGCGTGAAAGTAG+CGG | + | chr1_1:49422845-49422864 | Msa0025810:intron | 55.0% | |
| AAAAGGGTCCATTTGGGGGG+AGG | + | chr1_1:49423210-49423229 | Msa0025810:intron | 55.0% | |
| AAAGGGTCCATTTGGGGGGA+GGG | + | chr1_1:49423211-49423230 | Msa0025810:intron | 55.0% | |
| CACGCCAAAGACCAGACATC+TGG | + | chr1_1:49427040-49427059 | Msa0025810:intron | 55.0% | |
| ! | CGCTCCAGATGTCTGGTCTT+TGG | - | chr1_1:49427047-49427066 | None:intergenic | 55.0% |
| GTTTCGGCTATTGGACCACG+AGG | - | chr1_1:49421211-49421230 | None:intergenic | 55.0% | |
| ATAGCTAAACGGCTGAGGGC+GGG | - | chr1_1:49427317-49427336 | None:intergenic | 55.0% | |
| !! | TTCACGCATTTCTGGCGCGT+GGG | + | chr1_1:49428257-49428276 | Msa0025810:intron | 55.0% |
| ACGGACATACCCTATCGGTG+TGG | + | chr1_1:49430684-49430703 | Msa0025810:intron | 55.0% | |
| ATAGCTAAACGGCTGAGGGC+GGG | - | chr1_1:49427317-49427336 | None:intergenic | 55.0% | |
| TGGTCAAGTAGCCTAGTGGG+AGG | + | chr1_1:49433308-49433327 | Msa0025810:intron | 55.0% | |
| GGTCAAGTAGCCTAGTGGGA+GGG | + | chr1_1:49433309-49433328 | Msa0025810:intron | 55.0% | |
| GTCAAGTAGCCTAGTGGGAG+GGG | + | chr1_1:49433310-49433329 | Msa0025810:intron | 55.0% | |
| ! | CTCCCCGGTGTCAATTTAGG+TGG | - | chr1_1:49433489-49433508 | None:intergenic | 55.0% |
| CTCAAGGAGGACCACAGGTA+GGG | + | chr1_1:49433524-49433543 | Msa0025810:intron | 55.0% | |
| CCTATTCCCAACCCTACCTG+TGG | - | chr1_1:49433538-49433557 | None:intergenic | 55.0% | |
| CCACAGGTAGGGTTGGGAAT+AGG | + | chr1_1:49433535-49433554 | Msa0025810:intron | 55.0% | |
| GGTAGGGTTGGGAATAGGTC+AGG | + | chr1_1:49433540-49433559 | Msa0025810:intron | 55.0% | |
| GCCTGGCCTGTTTCGTAGAT+AGG | + | chr1_1:49433608-49433627 | Msa0025810:intron | 55.0% | |
| GCCTATCTACGAAACAGGCC+AGG | - | chr1_1:49433612-49433631 | None:intergenic | 55.0% | |
| !!! | ATAGGCCGTTTTTCTGGGCC+TGG | - | chr1_1:49434014-49434033 | None:intergenic | 55.0% |
| CCTGGCCTATGGCCTATCAT+AGG | - | chr1_1:49434032-49434051 | None:intergenic | 55.0% | |
| CCTATGATAGGCCATAGGCC+AGG | + | chr1_1:49434029-49434048 | Msa0025810:intron | 55.0% | |
| !! | GGTATTGGCTTGGGACCTGT+GGG | - | chr1_1:49434127-49434146 | None:intergenic | 55.0% |
| !! | TGGTATTGGCTTGGGACCTG+TGG | - | chr1_1:49434128-49434147 | None:intergenic | 55.0% |
| ! | AGGTGAGTAAGTGGGGTGTC+TGG | + | chr1_1:49435216-49435235 | Msa0025810:intron | 55.0% |
| ! | GGTGAGTAAGTGGGGTGTCT+GGG | + | chr1_1:49435217-49435236 | Msa0025810:intron | 55.0% |
| ATGGGCAGGAGATTGAGGCA+AGG | - | chr1_1:49436515-49436534 | None:intergenic | 55.0% | |
| TACAAGCAGCTTGGCGCGTA+TGG | + | chr1_1:49437211-49437230 | Msa0025810:intron | 55.0% | |
| ACAAGCAGCTTGGCGCGTAT+GGG | + | chr1_1:49437212-49437231 | Msa0025810:intron | 55.0% | |
| CCTCGATCGGATCGTCGAAC+AGG | - | chr1_1:49418912-49418931 | None:intergenic | 60.0% | |
| CCTGTTCGACGATCCGATCG+AGG | + | chr1_1:49418909-49418928 | Msa0025810:intron | 60.0% | |
| GGCAGCCTAAACCCTGGCAA+AGG | + | chr1_1:49419402-49419421 | Msa0025810:intron | 60.0% | |
| ! | CATCTGGAGTGTGACCCTCG+TGG | + | chr1_1:49421193-49421212 | Msa0025810:intron | 60.0% |
| ! | GCGTTTTCCCTCCCCCCAAA+TGG | - | chr1_1:49423221-49423240 | None:intergenic | 60.0% |
| AGGGTCACGCTCCAGATGTC+TGG | - | chr1_1:49427054-49427073 | None:intergenic | 60.0% | |
| TAGCTAAACGGCTGAGGGCG+GGG | - | chr1_1:49427316-49427335 | None:intergenic | 60.0% | |
| CGAGCCGCGATTGACCTGAT+TGG | - | chr1_1:49428154-49428173 | None:intergenic | 60.0% | |
| CGCTCGTGTAATCACGCGCA+TGG | - | chr1_1:49428214-49428233 | None:intergenic | 60.0% | |
| CACGCGCCAGAAATGCGTGA+AGG | - | chr1_1:49428258-49428277 | None:intergenic | 60.0% | |
| !! | CTTCACGCATTTCTGGCGCG+TGG | + | chr1_1:49428256-49428275 | Msa0025810:intron | 60.0% |
| TAGCTAAACGGCTGAGGGCG+GGG | - | chr1_1:49427316-49427335 | None:intergenic | 60.0% | |
| ATGTGTGAGCCCCTCCCACT+AGG | - | chr1_1:49433322-49433341 | None:intergenic | 60.0% | |
| CCTACCTGTGGTCCTCCTTG+AGG | - | chr1_1:49433526-49433545 | None:intergenic | 60.0% | |
| CCTCAAGGAGGACCACAGGT+AGG | + | chr1_1:49433523-49433542 | Msa0025810:intron | 60.0% | |
| AGGAGGACCACAGGTAGGGT+TGG | + | chr1_1:49433528-49433547 | Msa0025810:intron | 60.0% | |
| GGAGGACCACAGGTAGGGTT+GGG | + | chr1_1:49433529-49433548 | Msa0025810:intron | 60.0% | |
| GGGTTGGGAATAGGTCAGGC+CGG | + | chr1_1:49433544-49433563 | Msa0025810:intron | 60.0% | |
| AATAGGTCAGGCCGGCCTAC+AGG | + | chr1_1:49433552-49433571 | Msa0025810:intron | 60.0% | |
| ATAGGTCAGGCCGGCCTACA+GGG | + | chr1_1:49433553-49433572 | Msa0025810:intron | 60.0% | |
| TCTACGAAACAGGCCAGGCC+AGG | - | chr1_1:49433607-49433626 | None:intergenic | 60.0% | |
| GTAGGCTTTCAGGCCAGTCC+AGG | + | chr1_1:49433971-49433990 | Msa0025810:intron | 60.0% | |
| CCAGGCCAGGCCCAGAAAAA+CGG | + | chr1_1:49434006-49434025 | Msa0025810:intron | 60.0% | |
| ATAGGCCATAGGCCAGGCTC+AGG | + | chr1_1:49434035-49434054 | Msa0025810:intron | 60.0% | |
| ! | GGCTTTGATAGGCCTGAGCC+TGG | - | chr1_1:49434081-49434100 | None:intergenic | 60.0% |
| GGCTCAGGCCTATCAAAGCC+TGG | + | chr1_1:49434081-49434100 | Msa0025810:intron | 60.0% | |
| AGGCCTATCAAAGCCTGGCC+TGG | + | chr1_1:49434086-49434105 | Msa0025810:intron | 60.0% | |
| ! | AGGCCAGGCCAGGCTTTGAT+AGG | - | chr1_1:49434092-49434111 | None:intergenic | 60.0% |
| TATCAAAGCCTGGCCTGGCC+TGG | + | chr1_1:49434091-49434110 | Msa0025810:intron | 60.0% | |
| TGGGACCTGTGGGTGGGAAT+AGG | - | chr1_1:49434117-49434136 | None:intergenic | 60.0% | |
| !! | TTGGCTTGGGACCTGTGGGT+GGG | - | chr1_1:49434123-49434142 | None:intergenic | 60.0% |
| !! | ATTGGCTTGGGACCTGTGGG+TGG | - | chr1_1:49434124-49434143 | None:intergenic | 60.0% |
| CAGCTTGGCGCGTATGGGAA+AGG | + | chr1_1:49437217-49437236 | Msa0025810:intron | 60.0% | |
| ATGTGTGAGCCCCTCCCGCT+AGG | - | chr1_1:49421333-49421352 | None:intergenic | 65.0% | |
| ! | CATCTGGAGCGTGACCCTCG+TGG | + | chr1_1:49427056-49427075 | Msa0025810:intron | 65.0% |
| GAGGGCGGGGACCTCTCATT+GGG | - | chr1_1:49427303-49427322 | None:intergenic | 65.0% | |
| TGAGGGCGGGGACCTCTCAT+TGG | - | chr1_1:49427304-49427323 | None:intergenic | 65.0% | |
| GAGGGCGGGGACCTCTCATT+GGG | - | chr1_1:49427303-49427322 | None:intergenic | 65.0% | |
| TGAGGGCGGGGACCTCTCAT+TGG | - | chr1_1:49427304-49427323 | None:intergenic | 65.0% | |
| TAGGTCAGGCCGGCCTACAG+GGG | + | chr1_1:49433554-49433573 | Msa0025810:intron | 65.0% | |
| ! | GCCTACGGCCTGGCCTGTTT+TGG | + | chr1_1:49433576-49433595 | Msa0025810:intron | 65.0% |
| GCCAAAACAGGCCAGGCCGT+AGG | - | chr1_1:49433580-49433599 | None:intergenic | 65.0% | |
| AGGCCAGGCCAAAACAGGCC+AGG | - | chr1_1:49433587-49433606 | None:intergenic | 65.0% | |
| !!! | TGGCCTGTTTTGGCCTGGCC+TGG | + | chr1_1:49433586-49433605 | Msa0025810:intron | 65.0% |
| AGGCCAGGCCAGGCCAAAAC+AGG | - | chr1_1:49433592-49433611 | None:intergenic | 65.0% | |
| !!! | TGTTTTGGCCTGGCCTGGCC+TGG | + | chr1_1:49433591-49433610 | Msa0025810:intron | 65.0% |
| !! | CCGTTTTTCTGGGCCTGGCC+TGG | - | chr1_1:49434009-49434028 | None:intergenic | 65.0% |
| ACAGGCCTGAGCCTGGCCTA+TGG | - | chr1_1:49434043-49434062 | None:intergenic | 65.0% | |
| CCTGTGGGTGGGAATAGGCC+AGG | - | chr1_1:49434112-49434131 | None:intergenic | 65.0% | |
| CCTGGCCTATTCCCACCCAC+AGG | + | chr1_1:49434109-49434128 | Msa0025810:intron | 65.0% | |
| !!! | CGGCCTGGCCTGTTTTGGCC+TGG | + | chr1_1:49433581-49433600 | Msa0025810:intron | 70.0% |
| GAAACAGGCCAGGCCAGGCC+AGG | - | chr1_1:49433602-49433621 | None:intergenic | 70.0% | |
| GGAATAGGCCAGGCCAGGCC+AGG | - | chr1_1:49434102-49434121 | None:intergenic | 70.0% | |
| GGGTGGGAATAGGCCAGGCC+AGG | - | chr1_1:49434107-49434126 | None:intergenic | 70.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | + | chr1_1:49433561-49433580 | Msa0025810:intron | 75.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | - | chr1_1:49433566-49433585 | None:intergenic | 75.0% | |
| GCCTACAGGGGCCTACGGCC+TGG | + | chr1_1:49433566-49433585 | Msa0025810:intron | 75.0% | |
| GCCAGGCCGTAGGCCCCTGT+AGG | - | chr1_1:49433570-49433589 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 49416318 | 49437463 | 49416318 | ID=Msa0025810;Name=Msa0025810 |
| chr1_1 | mRNA | 49416318 | 49437463 | 49416318 | ID=Msa0025810-mRNA-1;Parent=Msa0025810;Name=Msa0025810-mRNA-1;_AED=0.26;_eAED=0.30;_QI=0|0|0|1|0|0|6|0|310 |
| chr1_1 | exon | 49416318 | 49416545 | 49416318 | ID=Msa0025810-mRNA-1:exon:14243;Parent=Msa0025810-mRNA-1 |
| chr1_1 | exon | 49422001 | 49422220 | 49422001 | ID=Msa0025810-mRNA-1:exon:14244;Parent=Msa0025810-mRNA-1 |
| chr1_1 | exon | 49424708 | 49424890 | 49424708 | ID=Msa0025810-mRNA-1:exon:14245;Parent=Msa0025810-mRNA-1 |
| chr1_1 | exon | 49424898 | 49424923 | 49424898 | ID=Msa0025810-mRNA-1:exon:14246;Parent=Msa0025810-mRNA-1 |
| chr1_1 | exon | 49434694 | 49434939 | 49434694 | ID=Msa0025810-mRNA-1:exon:14247;Parent=Msa0025810-mRNA-1 |
| chr1_1 | exon | 49437434 | 49437463 | 49437434 | ID=Msa0025810-mRNA-1:exon:14248;Parent=Msa0025810-mRNA-1 |
| chr1_1 | CDS | 49416318 | 49416545 | 49416318 | ID=Msa0025810-mRNA-1:cds;Parent=Msa0025810-mRNA-1 |
| chr1_1 | CDS | 49422001 | 49422220 | 49422001 | ID=Msa0025810-mRNA-1:cds;Parent=Msa0025810-mRNA-1 |
| chr1_1 | CDS | 49424708 | 49424890 | 49424708 | ID=Msa0025810-mRNA-1:cds;Parent=Msa0025810-mRNA-1 |
| chr1_1 | CDS | 49424898 | 49424923 | 49424898 | ID=Msa0025810-mRNA-1:cds;Parent=Msa0025810-mRNA-1 |
| chr1_1 | CDS | 49434694 | 49434939 | 49434694 | ID=Msa0025810-mRNA-1:cds;Parent=Msa0025810-mRNA-1 |
| chr1_1 | CDS | 49437434 | 49437463 | 49437434 | ID=Msa0025810-mRNA-1:cds;Parent=Msa0025810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
