Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000940 | XP_039684299.1 | 96.667 | 180 | 4 | 1 | 1 | 178 | 1 | 180 | 1.30e-123 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000940 | sp|O24543|AX22E_VIGRR | 73.770 | 183 | 39 | 5 | 1 | 178 | 1 | 179 | 7.93e-82 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000940 | A0A396HA94 | 96.667 | 180 | 4 | 1 | 1 | 178 | 1 | 180 | 6.22e-124 | 357 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0000940 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000940 | Msa0025810 | 0.813948 | 1.976433e-51 | -8.615850e-47 |
| Msa0000940 | Msa0030310 | 0.801327 | 9.488970e-49 | -8.615850e-47 |
| Msa0000940 | Msa0094010 | 0.821830 | 3.276431e-53 | -8.615850e-47 |
| Msa0000940 | Msa0100800 | 0.822852 | 1.897878e-53 | -8.615850e-47 |
| Msa0000940 | Msa0131450 | 0.802548 | 5.323662e-49 | -8.615850e-47 |
| Msa0000940 | Msa0152840 | 0.801445 | 8.973182e-49 | -8.615850e-47 |
| Msa0000940 | Msa0165900 | 0.805634 | 1.214596e-49 | -8.615850e-47 |
| Msa0000940 | Msa0212750 | -0.835174 | 1.956773e-56 | -8.615850e-47 |
| Msa0000940 | Msa0370160 | -0.803348 | 3.639363e-49 | -8.615850e-47 |
| Msa0000940 | Msa0437690 | -0.807122 | 5.897804e-50 | -8.615850e-47 |
| Msa0000940 | Msa0449820 | 0.801821 | 7.514279e-49 | -8.615850e-47 |
| Msa0000940 | Msa0463500 | 0.818448 | 1.949767e-52 | -8.615850e-47 |
| Msa0000940 | Msa0469910 | -0.803220 | 3.867152e-49 | -8.615850e-47 |
| Msa0000940 | Msa0534080 | 0.805069 | 1.595139e-49 | -8.615850e-47 |
| Msa0000940 | Msa0560470 | 0.801692 | 7.985128e-49 | -8.615850e-47 |
| Msa0000940 | Msa0578090 | 0.818447 | 1.950763e-52 | -8.615850e-47 |
| Msa0000940 | Msa0609970 | 0.817965 | 2.507960e-52 | -8.615850e-47 |
| Msa0000940 | Msa0615660 | 0.807261 | 5.512091e-50 | -8.615850e-47 |
| Msa0000940 | Msa0625790 | 0.807801 | 4.231844e-50 | -8.615850e-47 |
| Msa0000940 | Msa0639120 | 0.812924 | 3.317973e-51 | -8.615850e-47 |
| Msa0000940 | Msa0658480 | 0.807486 | 4.937620e-50 | -8.615850e-47 |
| Msa0000940 | Msa0664760 | 0.802901 | 4.502148e-49 | -8.615850e-47 |
| Msa0000940 | Msa0704800 | 0.809267 | 2.058927e-50 | -8.615850e-47 |
| Msa0000940 | Msa0707390 | 0.835673 | 1.463367e-56 | -8.615850e-47 |
| Msa0000940 | Msa0742510 | 0.807119 | 5.905593e-50 | -8.615850e-47 |
| Msa0000940 | Msa0797750 | 0.804223 | 2.394434e-49 | -8.615850e-47 |
| Msa0000940 | Msa0824730 | 0.810225 | 1.281202e-50 | -8.615850e-47 |
| Msa0000940 | Msa0966720 | -0.839668 | 1.381030e-57 | -8.615850e-47 |
| Msa0000940 | Msa1033520 | 0.810784 | 9.701744e-51 | -8.615850e-47 |
| Msa0000940 | Msa1036320 | 0.817981 | 2.487341e-52 | -8.615850e-47 |
| Msa0000940 | Msa1070050 | 0.800380 | 1.481170e-48 | -8.615850e-47 |
| Msa0000940 | Msa1071660 | 0.801224 | 9.960996e-49 | -8.615850e-47 |
| Msa0000940 | Msa1073400 | 0.834744 | 2.511098e-56 | -8.615850e-47 |
| Msa0000940 | Msa1073830 | 0.803404 | 3.543257e-49 | -8.615850e-47 |
| Msa0000940 | Msa1076600 | 0.866855 | 2.101204e-65 | -8.615850e-47 |
| Msa0000940 | Msa1113590 | 0.807338 | 5.306535e-50 | -8.615850e-47 |
| Msa0000940 | Msa1113880 | 0.810245 | 1.268830e-50 | -8.615850e-47 |
| Msa0000940 | Msa1114040 | 0.842095 | 3.187303e-58 | -8.615850e-47 |
| Msa0000940 | Msa1133630 | 0.997389 | 1.143703e-241 | -8.615850e-47 |
| Msa0000940 | Msa1158770 | 0.803179 | 3.943376e-49 | -8.615850e-47 |
| Msa0000940 | Msa1160360 | 0.811846 | 5.707676e-51 | -8.615850e-47 |
| Msa0000940 | Msa1171770 | -0.801048 | 1.081987e-48 | -8.615850e-47 |
| Msa0000940 | Msa1192850 | 0.807030 | 6.167589e-50 | -8.615850e-47 |
| Msa0000940 | Msa1193950 | -0.826327 | 2.882721e-54 | -8.615850e-47 |
| Msa0000940 | Msa1201830 | 0.814873 | 1.233951e-51 | -8.615850e-47 |
| Msa0000940 | Msa1246530 | -0.828997 | 6.584615e-55 | -8.615850e-47 |
| Msa0000940 | Msa1299360 | 0.808413 | 3.135269e-50 | -8.615850e-47 |
| Msa0000940 | Msa1310690 | 0.806265 | 8.948434e-50 | -8.615850e-47 |
| Msa0000940 | Msa1327490 | 0.807126 | 5.886096e-50 | -8.615850e-47 |
| Msa0000940 | Msa1338610 | 0.806678 | 7.320268e-50 | -8.615850e-47 |
| Msa0000940 | Msa1373880 | 0.988491 | 3.166422e-174 | -8.615850e-47 |
| Msa0000940 | Msa1438450 | 0.805240 | 1.469025e-49 | -8.615850e-47 |
| Msa0000940 | Msa1438640 | 0.818705 | 1.704632e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000940 | MtrunA17_Chr7g0260621 | 96.667 | 180 | 4 | 1 | 1 | 178 | 1 | 180 | 1.20e-127 | 357 |
| Msa0000940 | MtrunA17_Chr1g0184801 | 71.676 | 173 | 42 | 5 | 11 | 179 | 12 | 181 | 7.66e-80 | 236 |
| Msa0000940 | MtrunA17_Chr1g0166011 | 60.947 | 169 | 57 | 4 | 11 | 178 | 1 | 161 | 4.65e-66 | 200 |
| Msa0000940 | MtrunA17_Chr1g0187961 | 56.471 | 170 | 49 | 5 | 11 | 178 | 11 | 157 | 1.15e-59 | 184 |
| Msa0000940 | MtrunA17_Chr6g0486121 | 44.231 | 208 | 77 | 7 | 11 | 179 | 15 | 222 | 3.81e-43 | 144 |
| Msa0000940 | MtrunA17_Chr1g0190711 | 42.130 | 216 | 71 | 7 | 10 | 179 | 14 | 221 | 7.77e-40 | 135 |
| Msa0000940 | MtrunA17_Chr1g0187921 | 41.709 | 199 | 82 | 7 | 11 | 178 | 8 | 203 | 5.69e-38 | 130 |
| Msa0000940 | MtrunA17_Chr8g0390281 | 40.329 | 243 | 76 | 10 | 6 | 179 | 19 | 261 | 1.34e-37 | 130 |
| Msa0000940 | MtrunA17_Chr5g0428141 | 37.647 | 255 | 77 | 6 | 6 | 178 | 60 | 314 | 1.47e-37 | 132 |
| Msa0000940 | MtrunA17_Chr1g0184791 | 39.631 | 217 | 81 | 7 | 2 | 178 | 6 | 212 | 6.43e-37 | 127 |
| Msa0000940 | MtrunA17_Chr8g0366881 | 37.349 | 249 | 75 | 8 | 11 | 178 | 67 | 315 | 9.66e-37 | 130 |
| Msa0000940 | MtrunA17_Chr2g0331411 | 45.695 | 151 | 58 | 3 | 52 | 178 | 143 | 293 | 4.68e-36 | 127 |
| Msa0000940 | MtrunA17_Chr5g0411501 | 35.659 | 258 | 82 | 10 | 6 | 179 | 46 | 303 | 2.20e-34 | 123 |
| Msa0000940 | MtrunA17_Chr7g0260641 | 38.095 | 210 | 85 | 7 | 11 | 178 | 11 | 217 | 1.32e-31 | 114 |
| Msa0000940 | MtrunA17_Chr4g0004181 | 43.558 | 163 | 64 | 4 | 16 | 178 | 11 | 145 | 8.57e-31 | 110 |
| Msa0000940 | MtrunA17_Chr2g0330951 | 31.858 | 226 | 90 | 7 | 14 | 178 | 15 | 237 | 2.11e-23 | 93.6 |
| Msa0000940 | MtrunA17_Chr8g0340731 | 32.335 | 167 | 70 | 4 | 51 | 178 | 81 | 243 | 1.63e-20 | 85.9 |
| Msa0000940 | MtrunA17_Chr2g0332141 | 49.398 | 83 | 29 | 2 | 108 | 179 | 8 | 88 | 1.76e-20 | 82.0 |
| Msa0000940 | MtrunA17_Chr1g0183251 | 32.903 | 155 | 46 | 4 | 81 | 178 | 82 | 235 | 3.78e-18 | 79.3 |
| Msa0000940 | MtrunA17_Chr4g0069561 | 37.143 | 105 | 62 | 2 | 76 | 179 | 66 | 167 | 2.79e-17 | 75.5 |
| Msa0000940 | MtrunA17_Chr7g0270851 | 41.121 | 107 | 56 | 3 | 74 | 179 | 42 | 142 | 4.31e-17 | 74.3 |
| Msa0000940 | MtrunA17_Chr1g0193861 | 39.000 | 100 | 50 | 3 | 85 | 179 | 64 | 157 | 2.43e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000940 | AT5G43700.1 | 57.059 | 170 | 53 | 3 | 10 | 178 | 10 | 160 | 1.35e-61 | 189 |
| Msa0000940 | AT1G04240.1 | 55.114 | 176 | 57 | 4 | 10 | 178 | 4 | 164 | 2.20e-59 | 184 |
| Msa0000940 | AT1G04240.2 | 54.444 | 180 | 60 | 4 | 6 | 178 | 100 | 264 | 7.69e-59 | 186 |
| Msa0000940 | AT3G23030.1 | 55.172 | 174 | 39 | 4 | 11 | 178 | 9 | 149 | 6.19e-54 | 169 |
| Msa0000940 | AT3G23030.2 | 55.172 | 174 | 39 | 4 | 11 | 178 | 96 | 236 | 2.44e-53 | 171 |
| Msa0000940 | AT4G14560.1 | 56.548 | 168 | 45 | 3 | 11 | 178 | 7 | 146 | 1.47e-50 | 160 |
| Msa0000940 | AT3G04730.1 | 43.062 | 209 | 73 | 7 | 10 | 178 | 1 | 203 | 5.70e-42 | 140 |
| Msa0000940 | AT1G04250.1 | 41.837 | 196 | 80 | 6 | 11 | 178 | 7 | 196 | 6.32e-41 | 138 |
| Msa0000940 | AT4G29080.1 | 42.128 | 235 | 69 | 10 | 11 | 178 | 38 | 272 | 8.78e-41 | 139 |
| Msa0000940 | AT3G23050.2 | 40.291 | 206 | 85 | 6 | 10 | 178 | 5 | 209 | 5.82e-39 | 132 |
| Msa0000940 | AT4G14550.3 | 41.327 | 196 | 86 | 5 | 11 | 178 | 1 | 195 | 6.29e-39 | 132 |
| Msa0000940 | AT4G14550.1 | 41.327 | 196 | 86 | 5 | 11 | 178 | 1 | 195 | 8.66e-39 | 132 |
| Msa0000940 | AT4G14550.2 | 41.327 | 196 | 86 | 5 | 11 | 178 | 1 | 195 | 1.04e-38 | 132 |
| Msa0000940 | AT3G23050.1 | 40.291 | 206 | 85 | 6 | 10 | 178 | 5 | 209 | 1.28e-38 | 132 |
| Msa0000940 | AT2G22670.3 | 35.833 | 240 | 82 | 8 | 11 | 178 | 47 | 286 | 1.26e-31 | 116 |
| Msa0000940 | AT2G22670.1 | 35.833 | 240 | 82 | 8 | 11 | 178 | 47 | 286 | 1.26e-31 | 116 |
| Msa0000940 | AT2G22670.5 | 35.833 | 240 | 82 | 8 | 11 | 178 | 47 | 286 | 1.27e-31 | 116 |
| Msa0000940 | AT2G22670.2 | 35.833 | 240 | 82 | 8 | 11 | 178 | 47 | 286 | 1.27e-31 | 116 |
| Msa0000940 | AT2G22670.4 | 35.833 | 240 | 82 | 8 | 11 | 178 | 64 | 303 | 1.63e-31 | 116 |
| Msa0000940 | AT1G52830.1 | 44.578 | 166 | 78 | 8 | 16 | 179 | 11 | 164 | 2.18e-31 | 112 |
| Msa0000940 | AT5G65670.2 | 49.194 | 124 | 40 | 5 | 78 | 178 | 180 | 303 | 2.34e-30 | 113 |
| Msa0000940 | AT5G65670.1 | 49.194 | 124 | 40 | 5 | 78 | 178 | 180 | 303 | 2.42e-30 | 113 |
| Msa0000940 | AT1G15580.1 | 41.818 | 165 | 62 | 5 | 16 | 179 | 13 | 144 | 3.01e-30 | 108 |
| Msa0000940 | AT3G15540.1 | 41.212 | 165 | 87 | 4 | 16 | 178 | 11 | 167 | 1.90e-29 | 107 |
| Msa0000940 | AT3G16500.2 | 35.096 | 208 | 86 | 8 | 14 | 179 | 36 | 236 | 5.78e-25 | 97.8 |
| Msa0000940 | AT3G23050.3 | 38.415 | 164 | 75 | 5 | 10 | 148 | 5 | 167 | 5.97e-25 | 95.5 |
| Msa0000940 | AT3G16500.1 | 35.096 | 208 | 86 | 8 | 14 | 179 | 36 | 236 | 6.11e-25 | 97.8 |
| Msa0000940 | AT4G14550.4 | 39.726 | 146 | 72 | 3 | 11 | 141 | 1 | 145 | 4.41e-24 | 93.6 |
| Msa0000940 | AT4G28640.3 | 39.716 | 141 | 50 | 5 | 73 | 178 | 80 | 220 | 2.50e-21 | 87.8 |
| Msa0000940 | AT4G28640.1 | 39.716 | 141 | 50 | 5 | 73 | 178 | 80 | 220 | 2.70e-21 | 87.8 |
| Msa0000940 | AT4G28640.2 | 39.716 | 141 | 50 | 5 | 73 | 178 | 80 | 220 | 1.97e-20 | 86.3 |
| Msa0000940 | AT1G51950.1 | 30.144 | 209 | 89 | 7 | 14 | 179 | 40 | 234 | 2.28e-20 | 85.5 |
| Msa0000940 | AT1G04550.2 | 36.076 | 158 | 64 | 4 | 58 | 179 | 47 | 203 | 1.93e-19 | 82.8 |
| Msa0000940 | AT3G17600.1 | 41.237 | 97 | 50 | 2 | 85 | 178 | 48 | 140 | 1.99e-19 | 80.9 |
| Msa0000940 | AT2G33310.3 | 37.267 | 161 | 58 | 5 | 56 | 179 | 56 | 210 | 3.03e-19 | 82.4 |
| Msa0000940 | AT2G33310.1 | 37.267 | 161 | 58 | 5 | 56 | 179 | 56 | 210 | 3.03e-19 | 82.4 |
| Msa0000940 | AT2G33310.2 | 35.220 | 159 | 66 | 4 | 58 | 179 | 53 | 211 | 4.21e-19 | 82.0 |
| Msa0000940 | AT2G46990.2 | 46.575 | 73 | 39 | 0 | 107 | 179 | 85 | 157 | 1.47e-16 | 73.2 |
| Msa0000940 | AT2G46990.1 | 46.575 | 73 | 39 | 0 | 107 | 179 | 85 | 157 | 2.55e-16 | 73.2 |
| Msa0000940 | AT3G62100.2 | 42.683 | 82 | 47 | 0 | 98 | 179 | 74 | 155 | 4.85e-16 | 72.0 |
| Msa0000940 | AT3G62100.1 | 42.683 | 82 | 47 | 0 | 98 | 179 | 74 | 155 | 7.88e-16 | 71.6 |
| Msa0000940 | AT1G04100.1 | 35.333 | 150 | 49 | 5 | 78 | 179 | 90 | 239 | 8.59e-16 | 73.2 |
| Msa0000940 | AT5G25890.1 | 32.061 | 131 | 70 | 4 | 56 | 178 | 27 | 146 | 1.12e-15 | 71.2 |
| Msa0000940 | AT1G80390.1 | 35.433 | 127 | 59 | 4 | 16 | 142 | 19 | 122 | 2.19e-14 | 67.0 |
| Msa0000940 | AT4G32280.2 | 45.205 | 73 | 35 | 2 | 107 | 179 | 118 | 185 | 3.62e-11 | 60.1 |
Find 62 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTATTTATTTATAATTT+TGG | 0.106018 | 1_1:-2321004 | Msa0000940:three_prime_UTR |
| CTCAGAACTTCTTAAGGTTT+TGG | 0.201758 | 1_1:-2321596 | Msa0000940:CDS |
| CTTTATTTATATAGAGATTA+AGG | 0.258286 | 1_1:-2322146 | Msa0000940:five_prime_UTR |
| ATAGAGTTTGGATTTGGATT+TGG | 0.302329 | 1_1:-2322185 | Msa0000940:five_prime_UTR |
| TTCTTCCTAAAAGATCTAAT+TGG | 0.303224 | 1_1:+2321727 | None:intergenic |
| AATTAATTATTATCAAGAAA+TGG | 0.308561 | 1_1:-2322117 | Msa0000940:exon |
| CAGAATTTATCAATAGAGTT+TGG | 0.318162 | 1_1:-2322197 | Msa0000940:five_prime_UTR |
| TTATCAATAGAGTTTGGATT+TGG | 0.319954 | 1_1:-2322191 | Msa0000940:five_prime_UTR |
| AGAATTGATGATTGACGAAA+TGG | 0.360169 | 1_1:+2322253 | None:intergenic |
| ATTAATTATTATCAAGAAAT+GGG | 0.388582 | 1_1:-2322116 | Msa0000940:exon |
| AAAGGCTTGAATTAAGAAAT+CGG | 0.390933 | 1_1:+2321191 | None:intergenic |
| ATTAACAAAAGCACAAAATC+AGG | 0.391339 | 1_1:-2321271 | Msa0000940:three_prime_UTR |
| GAGTTACTCAGAACTTCTTA+AGG | 0.392999 | 1_1:-2321602 | Msa0000940:CDS |
| TTATGTATGACTTACTTTGT+AGG | 0.395482 | 1_1:+2321870 | None:intergenic |
| AATATGTTCAAGTGTACATT+TGG | 0.401164 | 1_1:-2321571 | Msa0000940:CDS |
| GTCATGATCACTTGTGGTTG+TGG | 0.404340 | 1_1:+2321908 | None:intergenic |
| TCTCTCTCAAATATCTAGAA+AGG | 0.408067 | 1_1:+2321173 | None:intergenic |
| GGATTTGGATTTGGATTTGA+AGG | 0.422068 | 1_1:-2322176 | Msa0000940:five_prime_UTR |
| ATCACCAGAGCTCTTAGAAA+TGG | 0.429190 | 1_1:+2321938 | None:intergenic |
| GAATTAAGATTGGGATTGCC+TGG | 0.450216 | 1_1:-2322050 | Msa0000940:CDS |
| GTGAAAGGATCAGAAGCAAA+AGG | 0.452877 | 1_1:-2321319 | Msa0000940:three_prime_UTR |
| GATTGTTCATCATCACTTCC+AGG | 0.460419 | 1_1:+2322032 | None:intergenic |
| AATTTAAGAACTTACTTCCA+TGG | 0.462324 | 1_1:+2321457 | None:intergenic |
| CAAGGACACAGAATTAAGAT+TGG | 0.462867 | 1_1:-2322060 | Msa0000940:CDS |
| GTTCTATAGAGGTGGCTTTG+AGG | 0.471957 | 1_1:-2321215 | Msa0000940:three_prime_UTR |
| TTGTAGGTTGGACAGTGTCT+TGG | 0.481019 | 1_1:+2321886 | None:intergenic |
| GTATGACTTACTTTGTAGGT+TGG | 0.482291 | 1_1:+2321874 | None:intergenic |
| CAACAAAATAAAGTGGAAGA+TGG | 0.489467 | 1_1:-2321697 | Msa0000940:CDS |
| AATGTATGTGAAAGTGAGTA+TGG | 0.492807 | 1_1:-2321668 | Msa0000940:CDS |
| TGAACATGCTCCTACTTATG+AGG | 0.497905 | 1_1:-2321515 | Msa0000940:CDS |
| TTCCTAAAAGATCTAATTGG+TGG | 0.498613 | 1_1:+2321730 | None:intergenic |
| GAATGAGATGAGAAGAAGCT+AGG | 0.499678 | 1_1:+2322275 | None:intergenic |
| AAGGCTTGAATTAAGAAATC+GGG | 0.511357 | 1_1:+2321192 | None:intergenic |
| AAGGACACAGAATTAAGATT+GGG | 0.515527 | 1_1:-2322059 | Msa0000940:CDS |
| ATGAGGATAAAGATGGTGAT+TGG | 0.518002 | 1_1:-2321498 | Msa0000940:CDS |
| GAGTCCATTTCTAAGAGCTC+TGG | 0.522835 | 1_1:-2321942 | Msa0000940:CDS |
| GTGAATATTCAGAAAGAGAA+GGG | 0.526820 | 1_1:-2321549 | Msa0000940:CDS |
| AATAAAGTGGAAGATGGAAG+TGG | 0.532994 | 1_1:-2321691 | Msa0000940:CDS |
| GCAGGGTACAAGTAGTTGGA+TGG | 0.541049 | 1_1:-2321753 | Msa0000940:intron |
| GATGGTGATTGGATGCTAGT+TGG | 0.542154 | 1_1:-2321487 | Msa0000940:CDS |
| TAGTTTACAACAAAATAAAG+TGG | 0.543416 | 1_1:-2321704 | Msa0000940:CDS |
| GGTGAATATTCAGAAAGAGA+AGG | 0.544646 | 1_1:-2321550 | Msa0000940:CDS |
| CCATCTTTATCCTCATAAGT+AGG | 0.549431 | 1_1:+2321505 | None:intergenic |
| CCTACTTATGAGGATAAAGA+TGG | 0.550050 | 1_1:-2321505 | Msa0000940:CDS |
| GAGCAGAGAGAGTTCTATAG+AGG | 0.551485 | 1_1:-2321226 | Msa0000940:three_prime_UTR |
| TGAAAGGATCAGAAGCAAAA+GGG | 0.552833 | 1_1:-2321318 | Msa0000940:three_prime_UTR |
| TGTTTATATCCTCATGCAAG+AGG | 0.561614 | 1_1:-2321351 | Msa0000940:three_prime_UTR |
| ATTAAAATATATACACAACA+TGG | 0.565005 | 1_1:-2321056 | Msa0000940:three_prime_UTR |
| ATGTACAATCAAAATAGCAT+TGG | 0.581894 | 1_1:+2321130 | None:intergenic |
| GTCTTGGTCATGATCACTTG+TGG | 0.583842 | 1_1:+2321902 | None:intergenic |
| GATGATGAACAATCATGTAA+TGG | 0.589704 | 1_1:-2322023 | Msa0000940:CDS |
| TATGTGAAAGTGAGTATGGC+TGG | 0.590400 | 1_1:-2321664 | Msa0000940:CDS |
| CAGAGAGAGTTCTATAGAGG+TGG | 0.594735 | 1_1:-2321223 | Msa0000940:three_prime_UTR |
| AGGATCAGAAGCAAAAGGGT+TGG | 0.596397 | 1_1:-2321314 | Msa0000940:three_prime_UTR |
| TCAGAAAGAGAAGGGTACAA+TGG | 0.598816 | 1_1:-2321541 | Msa0000940:CDS |
| TGGCTGGTGCACCTTACTTG+AGG | 0.603488 | 1_1:-2321648 | Msa0000940:CDS |
| TTAAAATATATACACAACAT+GGG | 0.610245 | 1_1:-2321055 | Msa0000940:three_prime_UTR |
| TGCTAGTTGGAGATGTTCCA+TGG | 0.610466 | 1_1:-2321474 | Msa0000940:CDS |
| AAGAGGTTGAAGATAGTGAA+AGG | 0.619298 | 1_1:-2321334 | Msa0000940:three_prime_UTR |
| TATCTTCAACCTCTTGCATG+AGG | 0.646730 | 1_1:+2321342 | None:intergenic |
| GATGAACAATCATGTAATGG+TGG | 0.660059 | 1_1:-2322020 | Msa0000940:CDS |
| AGAGTTGATTATTAATCACA+AGG | 0.665606 | 1_1:-2322078 | Msa0000940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTTATTTATAATTT+TGG | - | chr1_1:2322227-2322246 | Msa0000940:five_prime_UTR | 0.0% |
| !!! | AATTTATTTATTTATAATTT+TGG | - | chr1_1:2322227-2322246 | Msa0000940:five_prime_UTR | 0.0% |
| !! | AATTAATTATTATCAAGAAA+TGG | - | chr1_1:2321114-2321133 | Msa0000940:three_prime_UTR | 10.0% |
| !! | ATTAATTATTATCAAGAAAT+GGG | - | chr1_1:2321115-2321134 | Msa0000940:three_prime_UTR | 10.0% |
| !! | AATTAATTATTATCAAGAAA+TGG | - | chr1_1:2321114-2321133 | Msa0000940:three_prime_UTR | 10.0% |
| !! | ATTAATTATTATCAAGAAAT+GGG | - | chr1_1:2321115-2321134 | Msa0000940:three_prime_UTR | 10.0% |
| !!! | CTTTATTTATATAGAGATTA+AGG | - | chr1_1:2321085-2321104 | Msa0000940:three_prime_UTR | 15.0% |
| !! | ATCAACATATATATGAATAA+TGG | - | chr1_1:2321383-2321402 | Msa0000940:three_prime_UTR | 15.0% |
| !!! | ATAAACTTTTGTTGATTTTT+TGG | - | chr1_1:2321417-2321436 | Msa0000940:three_prime_UTR | 15.0% |
| !!! | TAAACTTTTGTTGATTTTTT+GGG | - | chr1_1:2321418-2321437 | Msa0000940:three_prime_UTR | 15.0% |
| !!! | TTTAATTATTTTTGGTTTCA+TGG | - | chr1_1:2321815-2321834 | Msa0000940:intron | 15.0% |
| !! | ATTAAAATATATACACAACA+TGG | - | chr1_1:2322175-2322194 | Msa0000940:five_prime_UTR | 15.0% |
| !! | TTAAAATATATACACAACAT+GGG | - | chr1_1:2322176-2322195 | Msa0000940:five_prime_UTR | 15.0% |
| !!! | CTTTATTTATATAGAGATTA+AGG | - | chr1_1:2321085-2321104 | Msa0000940:three_prime_UTR | 15.0% |
| !! | ATCAACATATATATGAATAA+TGG | - | chr1_1:2321383-2321402 | Msa0000940:three_prime_UTR | 15.0% |
| !!! | ATAAACTTTTGTTGATTTTT+TGG | - | chr1_1:2321417-2321436 | Msa0000940:three_prime_UTR | 15.0% |
| !!! | TAAACTTTTGTTGATTTTTT+GGG | - | chr1_1:2321418-2321437 | Msa0000940:three_prime_UTR | 15.0% |
| !!! | TTTAATTATTTTTGGTTTCA+TGG | - | chr1_1:2321815-2321834 | Msa0000940:intron | 15.0% |
| !! | ATTAAAATATATACACAACA+TGG | - | chr1_1:2322175-2322194 | Msa0000940:five_prime_UTR | 15.0% |
| !! | TTAAAATATATACACAACAT+GGG | - | chr1_1:2322176-2322195 | Msa0000940:five_prime_UTR | 15.0% |
| !!! | AAATTCATGAATATTTTTGC+AGG | - | chr1_1:2321460-2321479 | Msa0000940:exon | 20.0% |
| !!! | AATTCATGAATATTTTTGCA+GGG | - | chr1_1:2321461-2321480 | Msa0000940:exon | 20.0% |
| !! | TAGTTTACAACAAAATAAAG+TGG | - | chr1_1:2321527-2321546 | Msa0000940:CDS | 20.0% |
| !!! | AAATTCATGAATATTTTTGC+AGG | - | chr1_1:2321460-2321479 | Msa0000940:exon | 20.0% |
| !!! | AATTCATGAATATTTTTGCA+GGG | - | chr1_1:2321461-2321480 | Msa0000940:exon | 20.0% |
| !! | TAGTTTACAACAAAATAAAG+TGG | - | chr1_1:2321527-2321546 | Msa0000940:CDS | 20.0% |
| ! | GAAAAATCTGATTAAGTCTT+TGG | + | chr1_1:2321015-2321034 | None:intergenic | 25.0% |
| ! | CAGAATTTATCAATAGAGTT+TGG | - | chr1_1:2321034-2321053 | Msa0000940:three_prime_UTR | 25.0% |
| ! | TTATCAATAGAGTTTGGATT+TGG | - | chr1_1:2321040-2321059 | Msa0000940:three_prime_UTR | 25.0% |
| !! | AGAGTTGATTATTAATCACA+AGG | - | chr1_1:2321153-2321172 | Msa0000940:three_prime_UTR | 25.0% |
| ! | TTATGTATGACTTACTTTGT+AGG | + | chr1_1:2321364-2321383 | None:intergenic | 25.0% |
| ! | TTCTTCCTAAAAGATCTAAT+TGG | + | chr1_1:2321507-2321526 | None:intergenic | 25.0% |
| ! | AATATGTTCAAGTGTACATT+TGG | - | chr1_1:2321660-2321679 | Msa0000940:CDS | 25.0% |
| ! | AATTTAAGAACTTACTTCCA+TGG | + | chr1_1:2321777-2321796 | None:intergenic | 25.0% |
| !! | ATTAACAAAAGCACAAAATC+AGG | - | chr1_1:2321960-2321979 | Msa0000940:CDS | 25.0% |
| ! | AAAGGCTTGAATTAAGAAAT+CGG | + | chr1_1:2322043-2322062 | None:intergenic | 25.0% |
| ! | ATGTACAATCAAAATAGCAT+TGG | + | chr1_1:2322104-2322123 | None:intergenic | 25.0% |
| ! | GAAAAATCTGATTAAGTCTT+TGG | + | chr1_1:2321015-2321034 | None:intergenic | 25.0% |
| ! | CAGAATTTATCAATAGAGTT+TGG | - | chr1_1:2321034-2321053 | Msa0000940:three_prime_UTR | 25.0% |
| ! | TTATCAATAGAGTTTGGATT+TGG | - | chr1_1:2321040-2321059 | Msa0000940:three_prime_UTR | 25.0% |
| !! | AGAGTTGATTATTAATCACA+AGG | - | chr1_1:2321153-2321172 | Msa0000940:three_prime_UTR | 25.0% |
| ! | TTATGTATGACTTACTTTGT+AGG | + | chr1_1:2321364-2321383 | None:intergenic | 25.0% |
| ! | TTCTTCCTAAAAGATCTAAT+TGG | + | chr1_1:2321507-2321526 | None:intergenic | 25.0% |
| ! | AATATGTTCAAGTGTACATT+TGG | - | chr1_1:2321660-2321679 | Msa0000940:CDS | 25.0% |
| ! | AATTTAAGAACTTACTTCCA+TGG | + | chr1_1:2321777-2321796 | None:intergenic | 25.0% |
| !! | ATTAACAAAAGCACAAAATC+AGG | - | chr1_1:2321960-2321979 | Msa0000940:CDS | 25.0% |
| ! | AAAGGCTTGAATTAAGAAAT+CGG | + | chr1_1:2322043-2322062 | None:intergenic | 25.0% |
| ! | ATGTACAATCAAAATAGCAT+TGG | + | chr1_1:2322104-2322123 | None:intergenic | 25.0% |
| ! | AGAATTGATGATTGACGAAA+TGG | + | chr1_1:2320981-2321000 | None:intergenic | 30.0% |
| ATAGAGTTTGGATTTGGATT+TGG | - | chr1_1:2321046-2321065 | Msa0000940:three_prime_UTR | 30.0% | |
| AAGGACACAGAATTAAGATT+GGG | - | chr1_1:2321172-2321191 | Msa0000940:three_prime_UTR | 30.0% | |
| GATGATGAACAATCATGTAA+TGG | - | chr1_1:2321208-2321227 | Msa0000940:three_prime_UTR | 30.0% | |
| TTCCTAAAAGATCTAATTGG+TGG | + | chr1_1:2321504-2321523 | None:intergenic | 30.0% | |
| CAACAAAATAAAGTGGAAGA+TGG | - | chr1_1:2321534-2321553 | Msa0000940:CDS | 30.0% | |
| AATGTATGTGAAAGTGAGTA+TGG | - | chr1_1:2321563-2321582 | Msa0000940:CDS | 30.0% | |
| ! | AGATCTATTTTCCTCAAGTA+AGG | + | chr1_1:2321597-2321616 | None:intergenic | 30.0% |
| GTGAATATTCAGAAAGAGAA+GGG | - | chr1_1:2321682-2321701 | Msa0000940:CDS | 30.0% | |
| ! | GTGCTTTTGTTAATTTTGTG+AGG | + | chr1_1:2321954-2321973 | None:intergenic | 30.0% |
| AAGGCTTGAATTAAGAAATC+GGG | + | chr1_1:2322042-2322061 | None:intergenic | 30.0% | |
| TCTCTCTCAAATATCTAGAA+AGG | + | chr1_1:2322061-2322080 | None:intergenic | 30.0% | |
| ! | AGAATTGATGATTGACGAAA+TGG | + | chr1_1:2320981-2321000 | None:intergenic | 30.0% |
| ATAGAGTTTGGATTTGGATT+TGG | - | chr1_1:2321046-2321065 | Msa0000940:three_prime_UTR | 30.0% | |
| AAGGACACAGAATTAAGATT+GGG | - | chr1_1:2321172-2321191 | Msa0000940:three_prime_UTR | 30.0% | |
| GATGATGAACAATCATGTAA+TGG | - | chr1_1:2321208-2321227 | Msa0000940:three_prime_UTR | 30.0% | |
| TTCCTAAAAGATCTAATTGG+TGG | + | chr1_1:2321504-2321523 | None:intergenic | 30.0% | |
| CAACAAAATAAAGTGGAAGA+TGG | - | chr1_1:2321534-2321553 | Msa0000940:CDS | 30.0% | |
| AATGTATGTGAAAGTGAGTA+TGG | - | chr1_1:2321563-2321582 | Msa0000940:CDS | 30.0% | |
| ! | AGATCTATTTTCCTCAAGTA+AGG | + | chr1_1:2321597-2321616 | None:intergenic | 30.0% |
| GTGAATATTCAGAAAGAGAA+GGG | - | chr1_1:2321682-2321701 | Msa0000940:CDS | 30.0% | |
| ! | GTGCTTTTGTTAATTTTGTG+AGG | + | chr1_1:2321954-2321973 | None:intergenic | 30.0% |
| AAGGCTTGAATTAAGAAATC+GGG | + | chr1_1:2322042-2322061 | None:intergenic | 30.0% | |
| TCTCTCTCAAATATCTAGAA+AGG | + | chr1_1:2322061-2322080 | None:intergenic | 30.0% | |
| GGATTTGGATTTGGATTTGA+AGG | - | chr1_1:2321055-2321074 | Msa0000940:three_prime_UTR | 35.0% | |
| CAAGGACACAGAATTAAGAT+TGG | - | chr1_1:2321171-2321190 | Msa0000940:three_prime_UTR | 35.0% | |
| GATGAACAATCATGTAATGG+TGG | - | chr1_1:2321211-2321230 | Msa0000940:three_prime_UTR | 35.0% | |
| GTATGACTTACTTTGTAGGT+TGG | + | chr1_1:2321360-2321379 | None:intergenic | 35.0% | |
| AATAAAGTGGAAGATGGAAG+TGG | - | chr1_1:2321540-2321559 | Msa0000940:CDS | 35.0% | |
| GAGTTACTCAGAACTTCTTA+AGG | - | chr1_1:2321629-2321648 | Msa0000940:CDS | 35.0% | |
| ! | CTCAGAACTTCTTAAGGTTT+TGG | - | chr1_1:2321635-2321654 | Msa0000940:CDS | 35.0% |
| GGTGAATATTCAGAAAGAGA+AGG | - | chr1_1:2321681-2321700 | Msa0000940:CDS | 35.0% | |
| CCATCTTTATCCTCATAAGT+AGG | + | chr1_1:2321729-2321748 | None:intergenic | 35.0% | |
| CCTACTTATGAGGATAAAGA+TGG | - | chr1_1:2321726-2321745 | Msa0000940:CDS | 35.0% | |
| ATGAGGATAAAGATGGTGAT+TGG | - | chr1_1:2321733-2321752 | Msa0000940:CDS | 35.0% | |
| TGTTTATATCCTCATGCAAG+AGG | - | chr1_1:2321880-2321899 | Msa0000940:intron | 35.0% | |
| AAGAGGTTGAAGATAGTGAA+AGG | - | chr1_1:2321897-2321916 | Msa0000940:CDS | 35.0% | |
| TGAAAGGATCAGAAGCAAAA+GGG | - | chr1_1:2321913-2321932 | Msa0000940:CDS | 35.0% | |
| GGATTTGGATTTGGATTTGA+AGG | - | chr1_1:2321055-2321074 | Msa0000940:three_prime_UTR | 35.0% | |
| CAAGGACACAGAATTAAGAT+TGG | - | chr1_1:2321171-2321190 | Msa0000940:three_prime_UTR | 35.0% | |
| GATGAACAATCATGTAATGG+TGG | - | chr1_1:2321211-2321230 | Msa0000940:three_prime_UTR | 35.0% | |
| GTATGACTTACTTTGTAGGT+TGG | + | chr1_1:2321360-2321379 | None:intergenic | 35.0% | |
| AATAAAGTGGAAGATGGAAG+TGG | - | chr1_1:2321540-2321559 | Msa0000940:CDS | 35.0% | |
| GAGTTACTCAGAACTTCTTA+AGG | - | chr1_1:2321629-2321648 | Msa0000940:CDS | 35.0% | |
| ! | CTCAGAACTTCTTAAGGTTT+TGG | - | chr1_1:2321635-2321654 | Msa0000940:CDS | 35.0% |
| GGTGAATATTCAGAAAGAGA+AGG | - | chr1_1:2321681-2321700 | Msa0000940:CDS | 35.0% | |
| CCATCTTTATCCTCATAAGT+AGG | + | chr1_1:2321729-2321748 | None:intergenic | 35.0% | |
| CCTACTTATGAGGATAAAGA+TGG | - | chr1_1:2321726-2321745 | Msa0000940:CDS | 35.0% | |
| ATGAGGATAAAGATGGTGAT+TGG | - | chr1_1:2321733-2321752 | Msa0000940:CDS | 35.0% | |
| TGTTTATATCCTCATGCAAG+AGG | - | chr1_1:2321880-2321899 | Msa0000940:intron | 35.0% | |
| AAGAGGTTGAAGATAGTGAA+AGG | - | chr1_1:2321897-2321916 | Msa0000940:CDS | 35.0% | |
| TGAAAGGATCAGAAGCAAAA+GGG | - | chr1_1:2321913-2321932 | Msa0000940:CDS | 35.0% | |
| GAATGAGATGAGAAGAAGCT+AGG | + | chr1_1:2320959-2320978 | None:intergenic | 40.0% | |
| GAATTAAGATTGGGATTGCC+TGG | - | chr1_1:2321181-2321200 | Msa0000940:three_prime_UTR | 40.0% | |
| GATTGTTCATCATCACTTCC+AGG | + | chr1_1:2321202-2321221 | None:intergenic | 40.0% | |
| ATCACCAGAGCTCTTAGAAA+TGG | + | chr1_1:2321296-2321315 | None:intergenic | 40.0% | |
| ! | TTTTGCAGGGTACAAGTAGT+TGG | - | chr1_1:2321474-2321493 | Msa0000940:CDS | 40.0% |
| ! | GGCCACCAATTAGATCTTTT+AGG | - | chr1_1:2321499-2321518 | Msa0000940:CDS | 40.0% |
| TATGTGAAAGTGAGTATGGC+TGG | - | chr1_1:2321567-2321586 | Msa0000940:CDS | 40.0% | |
| ! | TCAGAAAGAGAAGGGTACAA+TGG | - | chr1_1:2321690-2321709 | Msa0000940:CDS | 40.0% |
| TGAACATGCTCCTACTTATG+AGG | - | chr1_1:2321716-2321735 | Msa0000940:CDS | 40.0% | |
| TATCTTCAACCTCTTGCATG+AGG | + | chr1_1:2321892-2321911 | None:intergenic | 40.0% | |
| GTGAAAGGATCAGAAGCAAA+AGG | - | chr1_1:2321912-2321931 | Msa0000940:CDS | 40.0% | |
| GAATGAGATGAGAAGAAGCT+AGG | + | chr1_1:2320959-2320978 | None:intergenic | 40.0% | |
| GAATTAAGATTGGGATTGCC+TGG | - | chr1_1:2321181-2321200 | Msa0000940:three_prime_UTR | 40.0% | |
| GATTGTTCATCATCACTTCC+AGG | + | chr1_1:2321202-2321221 | None:intergenic | 40.0% | |
| ATCACCAGAGCTCTTAGAAA+TGG | + | chr1_1:2321296-2321315 | None:intergenic | 40.0% | |
| ! | TTTTGCAGGGTACAAGTAGT+TGG | - | chr1_1:2321474-2321493 | Msa0000940:CDS | 40.0% |
| ! | GGCCACCAATTAGATCTTTT+AGG | - | chr1_1:2321499-2321518 | Msa0000940:CDS | 40.0% |
| TATGTGAAAGTGAGTATGGC+TGG | - | chr1_1:2321567-2321586 | Msa0000940:CDS | 40.0% | |
| ! | TCAGAAAGAGAAGGGTACAA+TGG | - | chr1_1:2321690-2321709 | Msa0000940:CDS | 40.0% |
| TGAACATGCTCCTACTTATG+AGG | - | chr1_1:2321716-2321735 | Msa0000940:CDS | 40.0% | |
| TATCTTCAACCTCTTGCATG+AGG | + | chr1_1:2321892-2321911 | None:intergenic | 40.0% | |
| GTGAAAGGATCAGAAGCAAA+AGG | - | chr1_1:2321912-2321931 | Msa0000940:CDS | 40.0% | |
| ! | GAGTCCATTTCTAAGAGCTC+TGG | - | chr1_1:2321289-2321308 | Msa0000940:three_prime_UTR | 45.0% |
| GTCATGATCACTTGTGGTTG+TGG | + | chr1_1:2321326-2321345 | None:intergenic | 45.0% | |
| GTCTTGGTCATGATCACTTG+TGG | + | chr1_1:2321332-2321351 | None:intergenic | 45.0% | |
| ! | TTGTAGGTTGGACAGTGTCT+TGG | + | chr1_1:2321348-2321367 | None:intergenic | 45.0% |
| GATGGTGATTGGATGCTAGT+TGG | - | chr1_1:2321744-2321763 | Msa0000940:CDS | 45.0% | |
| TGCTAGTTGGAGATGTTCCA+TGG | - | chr1_1:2321757-2321776 | Msa0000940:intron | 45.0% | |
| AGGATCAGAAGCAAAAGGGT+TGG | - | chr1_1:2321917-2321936 | Msa0000940:CDS | 45.0% | |
| GAGCAGAGAGAGTTCTATAG+AGG | - | chr1_1:2322005-2322024 | Msa0000940:CDS | 45.0% | |
| CAGAGAGAGTTCTATAGAGG+TGG | - | chr1_1:2322008-2322027 | Msa0000940:CDS | 45.0% | |
| ! | GTTCTATAGAGGTGGCTTTG+AGG | - | chr1_1:2322016-2322035 | Msa0000940:CDS | 45.0% |
| ! | GAGTCCATTTCTAAGAGCTC+TGG | - | chr1_1:2321289-2321308 | Msa0000940:three_prime_UTR | 45.0% |
| GTCATGATCACTTGTGGTTG+TGG | + | chr1_1:2321326-2321345 | None:intergenic | 45.0% | |
| GTCTTGGTCATGATCACTTG+TGG | + | chr1_1:2321332-2321351 | None:intergenic | 45.0% | |
| ! | TTGTAGGTTGGACAGTGTCT+TGG | + | chr1_1:2321348-2321367 | None:intergenic | 45.0% |
| GATGGTGATTGGATGCTAGT+TGG | - | chr1_1:2321744-2321763 | Msa0000940:CDS | 45.0% | |
| TGCTAGTTGGAGATGTTCCA+TGG | - | chr1_1:2321757-2321776 | Msa0000940:intron | 45.0% | |
| AGGATCAGAAGCAAAAGGGT+TGG | - | chr1_1:2321917-2321936 | Msa0000940:CDS | 45.0% | |
| GAGCAGAGAGAGTTCTATAG+AGG | - | chr1_1:2322005-2322024 | Msa0000940:CDS | 45.0% | |
| CAGAGAGAGTTCTATAGAGG+TGG | - | chr1_1:2322008-2322027 | Msa0000940:CDS | 45.0% | |
| ! | GTTCTATAGAGGTGGCTTTG+AGG | - | chr1_1:2322016-2322035 | Msa0000940:CDS | 45.0% |
| !!! | CTTTTAATTTTAATTATTTT+TGG | - | chr1_1:2321807-2321826 | Msa0000940:intron | 5.0% |
| !!! | CTTTTAATTTTAATTATTTT+TGG | - | chr1_1:2321807-2321826 | Msa0000940:intron | 5.0% |
| GCAGGGTACAAGTAGTTGGA+TGG | - | chr1_1:2321478-2321497 | Msa0000940:CDS | 50.0% | |
| GCAGGGTACAAGTAGTTGGA+TGG | - | chr1_1:2321478-2321497 | Msa0000940:CDS | 50.0% | |
| TGGCTGGTGCACCTTACTTG+AGG | - | chr1_1:2321583-2321602 | Msa0000940:CDS | 55.0% | |
| TGGCTGGTGCACCTTACTTG+AGG | - | chr1_1:2321583-2321602 | Msa0000940:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 2320943 | 2322310 | 2320943 | ID=Msa0000940;Name=Msa0000940 |
| chr1_1 | mRNA | 2320943 | 2322310 | 2320943 | ID=Msa0000940-mRNA-1;Parent=Msa0000940;Name=Msa0000940-mRNA-1;_AED=0.02;_eAED=0.02;_QI=190|1|1|1|1|1|2|525|179 |
| chr1_1 | exon | 2320943 | 2321771 | 2320943 | ID=Msa0000940-mRNA-1:exon:507;Parent=Msa0000940-mRNA-1 |
| chr1_1 | exon | 2321885 | 2322310 | 2321885 | ID=Msa0000940-mRNA-1:exon:506;Parent=Msa0000940-mRNA-1 |
| chr1_1 | five_prime_UTR | 2322121 | 2322310 | 2322121 | ID=Msa0000940-mRNA-1:five_prime_utr;Parent=Msa0000940-mRNA-1 |
| chr1_1 | CDS | 2321885 | 2322120 | 2321885 | ID=Msa0000940-mRNA-1:cds;Parent=Msa0000940-mRNA-1 |
| chr1_1 | CDS | 2321468 | 2321771 | 2321468 | ID=Msa0000940-mRNA-1:cds;Parent=Msa0000940-mRNA-1 |
| chr1_1 | three_prime_UTR | 2320943 | 2321467 | 2320943 | ID=Msa0000940-mRNA-1:three_prime_utr;Parent=Msa0000940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
