AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025950 MtrunA17_Chr1g0179081 58.955 134 26 4 129 233 795 928 1.54e-39 145
Msa0025950 MtrunA17_Chr8g0368761 51.825 137 31 2 129 233 772 905 1.00e-35 134
Msa0025950 MtrunA17_Chr2g0292651 50.000 134 38 4 129 233 768 901 1.91e-31 121
Msa0025950 MtrunA17_Chr5g0442391 71.053 76 16 1 53 128 426 495 2.97e-27 108
Msa0025950 MtrunA17_Chr3g0095501 63.158 76 22 1 53 128 433 502 9.81e-23 96.3
Msa0025950 MtrunA17_Chr1g0180831 79.412 34 7 0 200 233 26 59 1.31e-14 66.6
Msa0025950 MtrunA17_Chr1g0183051 35.455 110 57 4 22 128 352 450 1.82e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025950 AT5G08560.1 48.305 118 58 2 12 128 391 506 1.61e-25 104
Msa0025950 AT5G08560.2 48.305 118 58 2 12 128 391 506 1.61e-25 104
Msa0025950 AT5G08560.3 48.305 118 58 2 12 128 391 506 1.61e-25 104
Msa0025950 AT5G43920.1 35.514 107 61 2 22 128 362 460 5.09e-13 68.2

Find 70 sgRNAs with CRISPR-Local

Find 916 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCCATAGATTTATTTCT+TGG 0.184877 1_1:-49557305 None:intergenic
CCATTTCACGGAATCTAATT+TGG 0.209963 1_1:-49548554 None:intergenic
CATATAAAACTTGATGAAAA+TGG 0.268437 1_1:+49548504 Msa0025950:five_prime_UTR
TCTGTTGCCTTATATATTAT+CGG 0.275087 1_1:+49561547 Msa0025950:CDS
ATTCACTTTGATTGTCACTA+TGG 0.299236 1_1:+49548462 Msa0025950:five_prime_UTR
TATATCTTCATGTAAATAAC+TGG 0.311314 1_1:-49548420 None:intergenic
TGCATCATGAAGCAAATATA+TGG 0.316304 1_1:+49561307 Msa0025950:CDS
TGAACCAAGAAATAAATCTA+TGG 0.348089 1_1:+49557301 Msa0025950:CDS
GACGGAGCTGCTGCAGAGAT+TGG 0.357540 1_1:+49548635 Msa0025950:CDS
TGAGCATCAATGCCTACTTA+AGG 0.360275 1_1:+49561644 Msa0025950:CDS
AGGAAACACCATTTGTTGAT+TGG 0.361263 1_1:+49561244 Msa0025950:CDS
ATTATAATGTCTTGCTTTGG+TGG 0.366564 1_1:+49548161 Msa0025950:five_prime_UTR
ATTATAATGTCTTGCTTTGG+TGG 0.366564 1_1:+49557384 Msa0025950:CDS
TTTATTATAATGTCTTGCTT+TGG 0.372677 1_1:+49548158 Msa0025950:five_prime_UTR
TTTATTATAATGTCTTGCTT+TGG 0.372677 1_1:+49557381 Msa0025950:CDS
CTGCTAGATCGGAGATGGGC+CGG 0.378849 1_1:+49548612 Msa0025950:exon
AAATTAACCGATAATATATA+AGG 0.382421 1_1:-49561554 None:intergenic
CCAAATTAGATTCCGTGAAA+TGG 0.389565 1_1:+49548554 Msa0025950:five_prime_UTR
GAGCATCAATGCCTACTTAA+GGG 0.392675 1_1:+49561645 Msa0025950:CDS
TGCAGACACTTAACTATAGA+TGG 0.411557 1_1:-49561288 None:intergenic
AAAGGATAACAAATTCTTGT+TGG 0.411653 1_1:+49557269 Msa0025950:CDS
AAAGTGAGGATTCATAAGTA+TGG 0.420071 1_1:+49548210 Msa0025950:five_prime_UTR
AGCAAATATATGGACTGAAA+AGG 0.422277 1_1:+49561317 Msa0025950:CDS
CGGGGCTGCTAGATCGGAGA+TGG 0.432256 1_1:+49548607 Msa0025950:exon
TTGTACTTGCCAACGAGCTT+AGG 0.440609 1_1:-49548116 None:intergenic
TTGTACTTGCCAACGAGCTT+AGG 0.440609 1_1:-49557339 None:intergenic
GACAATAACTTCTTTATCAA+AGG 0.440926 1_1:+49557251 Msa0025950:intron
GCTGCCATCTATTGCTATAG+AGG 0.447686 1_1:+49561224 Msa0025950:CDS
CTTAACTATAGATGGATGTA+TGG 0.461208 1_1:-49561280 None:intergenic
GCAAATATATGGACTGAAAA+GGG 0.471783 1_1:+49561318 Msa0025950:CDS
TATAAGATATTATCCTTCAA+AGG 0.473293 1_1:-49548264 None:intergenic
GTTTCCTCTATAGCAATAGA+TGG 0.480287 1_1:-49561228 None:intergenic
CTCATGCAAGAAACGGTTGA+TGG 0.480355 1_1:+49549168 Msa0025950:CDS
GAATGAACACAATCCTTTGA+AGG 0.481506 1_1:+49548251 Msa0025950:five_prime_UTR
AAAAGATGTCCAATGTCAAA+TGG 0.485689 1_1:+49549074 Msa0025950:CDS
TGCTAGATCGGAGATGGGCC+GGG 0.486001 1_1:+49548613 Msa0025950:exon
ATAATTATCCAATCAACAAA+TGG 0.489361 1_1:-49561252 None:intergenic
AGGTGACGGGGCTGCTAGAT+CGG 0.496214 1_1:+49548601 Msa0025950:five_prime_UTR
AAGATATAATGAATTGAGCT+TGG 0.509519 1_1:+49548435 Msa0025950:five_prime_UTR
CCATGTCTGAAACTCGGAAA+AGG 0.509982 1_1:-49561606 None:intergenic
TAATAAAGCTAGCAGGCCTA+TGG 0.514573 1_1:-49557365 None:intergenic
GACATTATAATAAAGATAGC+AGG 0.519254 1_1:-49548149 None:intergenic
GACATTATAATAAAGCTAGC+AGG 0.524437 1_1:-49557372 None:intergenic
CTGAATATGTTGAAGTGAAA+GGG 0.524733 1_1:+49549098 Msa0025950:CDS
TAATAAAGATAGCAGGCCTA+TGG 0.526450 1_1:-49548142 None:intergenic
TTCCTCGCTCATGCAAGAAA+CGG 0.534516 1_1:+49549161 Msa0025950:CDS
ATAAATCTATGGAATATTGA+AGG 0.543789 1_1:+49557312 Msa0025950:CDS
ATATTCAGACCATTTGACAT+TGG 0.548689 1_1:-49549083 None:intergenic
AGTTGCGCAAAGGAGGTGAC+GGG 0.556812 1_1:+49548588 Msa0025950:five_prime_UTR
AAGTTGCGCAAAGGAGGTGA+CGG 0.559484 1_1:+49548587 Msa0025950:five_prime_UTR
TCTGAATATGTTGAAGTGAA+AGG 0.563055 1_1:+49549097 Msa0025950:CDS
AAACATGTCTTCCCTTAAGT+AGG 0.563557 1_1:-49561656 None:intergenic
TCTCTGCAGCAGCTCCGTCC+CGG 0.570077 1_1:-49548631 None:intergenic
GCTGCTGCAGAGATTGGAGA+TGG 0.571294 1_1:+49548641 Msa0025950:CDS
TTTCATTGCTAGTGAAAGTG+AGG 0.572779 1_1:+49548196 Msa0025950:five_prime_UTR
CTTCAAAAGTTGCGCAAAGG+AGG 0.573380 1_1:+49548581 Msa0025950:five_prime_UTR
AACCGTTTCTTGCATGAGCG+AGG 0.574230 1_1:-49549163 None:intergenic
AGATCGGAGATGGGCCGGGA+CGG 0.593534 1_1:+49548617 Msa0025950:exon
TTGGCAAGTACAATGGCCAT+AGG 0.598301 1_1:+49548126 Msa0025950:five_prime_UTR
TTGGCAAGTACAATGGCCAT+AGG 0.598301 1_1:+49557349 Msa0025950:CDS
GGGGCTGCTAGATCGGAGAT+GGG 0.600787 1_1:+49548608 Msa0025950:exon
TACCTTCAAAAGTTGCGCAA+AGG 0.612577 1_1:+49548578 Msa0025950:five_prime_UTR
TGAATGCCATGTCTGAAACT+CGG 0.614369 1_1:-49561612 None:intergenic
GAAGGCGATCCTAAGCTCGT+TGG 0.625460 1_1:+49548107 None:intergenic
GAAGGCGATCCTAAGCTCGT+TGG 0.625460 1_1:+49557330 Msa0025950:CDS
AAGCTCGTTGGCAAGTACAA+TGG 0.642578 1_1:+49548119 Msa0025950:five_prime_UTR
AAGCTCGTTGGCAAGTACAA+TGG 0.642578 1_1:+49557342 Msa0025950:CDS
TCACGGATATAAGCAAGTGA+AGG 0.655021 1_1:+49561698 Msa0025950:CDS
TATAAGCAAGTGAAGGACTG+AGG 0.683793 1_1:+49561705 Msa0025950:CDS
GTTGCGCAAAGGAGGTGACG+GGG 0.703235 1_1:+49548589 Msa0025950:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTTTATATTA+GGG - chr1_1:49558621-49558640 None:intergenic 0.0%
!!! TTTATTTTATTTTTTATATT+AGG - chr1_1:49558622-49558641 None:intergenic 0.0%
!!! ATTTTTATATATCGATTATA+TGG - chr1_1:49549843-49549862 None:intergenic 10.0%
!! ATATAATCGATATATAAAAA+TGG + chr1_1:49549842-49549861 Msa0025950:intron 10.0%
!! CAATTAAAAAAAACAATTAA+AGG + chr1_1:49553278-49553297 Msa0025950:intron 10.0%
!!! TCTTTTTTTTTAAATGAAAA+AGG + chr1_1:49554654-49554673 Msa0025950:intron 10.0%
!!! AAATAATGGAAAAATATATA+AGG + chr1_1:49554683-49554702 Msa0025950:intron 10.0%
!! AATTATACTCAAAAAAATTT+AGG + chr1_1:49555257-49555276 Msa0025950:intron 10.0%
!! TAAAATAAAATTATCATTTC+AGG + chr1_1:49555424-49555443 Msa0025950:intron 10.0%
!!! TTTGTAAAATAAAATTCTTT+TGG - chr1_1:49556716-49556735 None:intergenic 10.0%
!! AAATAAAAAATCTAATACAA+CGG - chr1_1:49557126-49557145 None:intergenic 10.0%
!!! TATTTTGATCTTTAAATTTT+AGG + chr1_1:49559045-49559064 Msa0025950:intron 10.0%
!!! ATTTTGATCTTTAAATTTTA+GGG + chr1_1:49559046-49559065 Msa0025950:intron 10.0%
!!! ATTTTTATATATCGATTATA+TGG - chr1_1:49549843-49549862 None:intergenic 10.0%
!! ATATAATCGATATATAAAAA+TGG + chr1_1:49549842-49549861 Msa0025950:intron 10.0%
!!! ACAAAAGTAAATTTTTTTTA+CGG - chr1_1:49560881-49560900 None:intergenic 10.0%
!!! AATCAAGTTTTTATGATATA+AGG - chr1_1:49548361-49548380 None:intergenic 15.0%
!!! ATTCTAAAAAACAATTTTTG+TGG - chr1_1:49548753-49548772 None:intergenic 15.0%
!! AGATAAATATGAAGTTAAAT+AGG - chr1_1:49549268-49549287 None:intergenic 15.0%
!!! CGATAACTATTTTATTTATT+TGG + chr1_1:49549782-49549801 Msa0025950:intron 15.0%
!!! TATTTGGATCTTTAAATTTT+AGG + chr1_1:49549798-49549817 Msa0025950:intron 15.0%
!!! ATTTGGATCTTTAAATTTTA+GGG + chr1_1:49549799-49549818 Msa0025950:intron 15.0%
!! AAACTAAATGAATAATTTCA+GGG - chr1_1:49549931-49549950 None:intergenic 15.0%
!! AATGAAAATTCATTCAATAA+AGG - chr1_1:49551092-49551111 None:intergenic 15.0%
!!! CAAAAGTAACATTTTTTTTA+CGG - chr1_1:49551117-49551136 None:intergenic 15.0%
!! TGCAATTAAAAAACAATTAA+AGG - chr1_1:49551257-49551276 None:intergenic 15.0%
!!! TGATCAATTTATCTATTTTA+GGG - chr1_1:49552728-49552747 Msa0025960:intron 15.0%
!! AATTGATCAGAAAATATATA+AGG + chr1_1:49552739-49552758 Msa0025950:intron 15.0%
!! TAGTTGTACAAATATTTAAA+AGG - chr1_1:49553994-49554013 None:intergenic 15.0%
!! TAAATAGATTCTAAATAACA+TGG + chr1_1:49554372-49554391 Msa0025950:intron 15.0%
!! TTGATAAATTTACTTCAAAT+AGG - chr1_1:49554570-49554589 None:intergenic 15.0%
!! GAAGTAAATTTATCAAATTA+TGG + chr1_1:49554574-49554593 Msa0025950:intron 15.0%
!! GAAAAAGGAAAATAAAATAA+TGG + chr1_1:49554669-49554688 Msa0025950:intron 15.0%
!!! ATTCAATTAAATTGTTTTCA+AGG + chr1_1:49555000-49555019 Msa0025950:intron 15.0%
!! ATTATTATTATTTGTCCAAT+GGG - chr1_1:49555240-49555259 None:intergenic 15.0%
!! AATTATTATTATTTGTCCAA+TGG - chr1_1:49555241-49555260 None:intergenic 15.0%
!!! TTTTTTATAAAAATCGTTAC+AGG + chr1_1:49555374-49555393 Msa0025950:intron 15.0%
!!! TTTAATTAATCAAAGACTTT+TGG + chr1_1:49555657-49555676 Msa0025950:intron 15.0%
!!! CTAATTTTTTTTTCCTTAAT+AGG + chr1_1:49555772-49555791 Msa0025950:intron 15.0%
!! TATGGAAAAAAAAAAAAAGT+AGG - chr1_1:49556301-49556320 None:intergenic 15.0%
!!! GTAATTAATTTTATGTTAAG+TGG - chr1_1:49556423-49556442 None:intergenic 15.0%
!! TTAATTTCTTACACATAAAT+TGG + chr1_1:49556456-49556475 Msa0025950:intron 15.0%
!! TATTAATGCATAAAACATAA+TGG - chr1_1:49556538-49556557 None:intergenic 15.0%
!!! GTTGTATTAGATTTTTTATT+TGG + chr1_1:49557125-49557144 Msa0025950:intron 15.0%
!!! AATCAAGTTTTTATGATATA+AGG - chr1_1:49548361-49548380 None:intergenic 15.0%
!!! ATTCTAAAAAACAATTTTTG+TGG - chr1_1:49548753-49548772 None:intergenic 15.0%
!! AGATAAATATGAAGTTAAAT+AGG - chr1_1:49549268-49549287 None:intergenic 15.0%
!! AAACTAAATGAATAATTTCA+GGG - chr1_1:49549931-49549950 None:intergenic 15.0%
!! AAATTAACCGATAATATATA+AGG - chr1_1:49561557-49561576 None:intergenic 15.0%
!! TTTATTATAATGTCTTGCTT+TGG + chr1_1:49548158-49548177 Msa0025950:five_prime_UTR 20.0%
!! TATAAGATATTATCCTTCAA+AGG - chr1_1:49556737-49556756 None:intergenic 20.0%
!! TACTTGCTCAAAAAAAAAAA+AGG - chr1_1:49548330-49548349 None:intergenic 20.0%
!! TATATCTTCATGTAAATAAC+TGG - chr1_1:49548423-49548442 None:intergenic 20.0%
!! CATATAAAACTTGATGAAAA+TGG + chr1_1:49548504-49548523 Msa0025950:five_prime_UTR 20.0%
!!! AAAAAACAATTTTTGTGGAT+GGG - chr1_1:49548748-49548767 None:intergenic 20.0%
!!! TAAAAAACAATTTTTGTGGA+TGG - chr1_1:49548749-49548768 None:intergenic 20.0%
!!! TAATATAATTGAAGCACTAA+TGG + chr1_1:49548843-49548862 Msa0025950:intron 20.0%
!! CAATAACACATTTAAAGATA+AGG - chr1_1:49549039-49549058 None:intergenic 20.0%
!! AATAATGCCTAGTAATTTAT+TGG + chr1_1:49549467-49549486 Msa0025950:intron 20.0%
!! TTTCTTTAATATGTTATGTG+TGG + chr1_1:49549539-49549558 Msa0025950:intron 20.0%
!!! TTTATATATCGATTATATGG+AGG - chr1_1:49549840-49549859 None:intergenic 20.0%
!! GAAACTAAATGAATAATTTC+AGG - chr1_1:49549932-49549951 None:intergenic 20.0%
!!! AAGTTTTTTTGGTGTATTAA+GGG + chr1_1:49550593-49550612 Msa0025950:intron 20.0%
!! CATCTTCATTATAATATGTT+TGG + chr1_1:49551060-49551079 Msa0025950:intron 20.0%
!! AGAAAAAGTCAAAACAATTA+AGG + chr1_1:49551299-49551318 Msa0025950:intron 20.0%
!!! AAGGTTTGTTTTTATTTTCT+AGG + chr1_1:49551318-49551337 Msa0025950:intron 20.0%
!! ATCCAATTTCATTATACTTA+GGG - chr1_1:49551649-49551668 None:intergenic 20.0%
!! TATCCAATTTCATTATACTT+AGG - chr1_1:49551650-49551669 None:intergenic 20.0%
!!! CAAAAGTAAGTAATTTTTTG+TGG + chr1_1:49551730-49551749 Msa0025950:intron 20.0%
!! AATTAACCGGATAATATATA+AGG - chr1_1:49551787-49551806 None:intergenic 20.0%
!! CCTTAAATAGATAAATTAAC+CGG - chr1_1:49551800-49551819 None:intergenic 20.0%
!! CGGTTAATTTATCTATTTAA+GGG + chr1_1:49551798-49551817 Msa0025950:intron 20.0%
!!! TATTCTAATTTATCCTTTTC+CGG - chr1_1:49551824-49551843 None:intergenic 20.0%
!!! CTGATCAATTTATCTATTTT+AGG - chr1_1:49552729-49552748 Msa0025960:intron 20.0%
!!! CAAAAGTTAGTAATTTTTTG+TGG - chr1_1:49552803-49552822 Msa0025960:intron 20.0%
!! AATTCTTATGAACCATAAAA+AGG - chr1_1:49551378-49551397 None:intergenic 20.0%
!! AGAAAAAGTCAAAACAATTA+TGG - chr1_1:49551299-49551318 None:intergenic 20.0%
!! GATTAAAACTTTGCAATTAT+AGG + chr1_1:49553441-49553460 Msa0025950:intron 20.0%
!! TGATATATGACAACATATTA+TGG + chr1_1:49553511-49553530 Msa0025950:intron 20.0%
!!! TTGTTTTTGTCCAATAAAAA+GGG - chr1_1:49554051-49554070 None:intergenic 20.0%
!!! CTTTTTTTCTCTCTTTTAAT+TGG + chr1_1:49554119-49554138 Msa0025950:intron 20.0%
!!! TTTTAATTGGTCAAAAACAA+TGG + chr1_1:49554132-49554151 Msa0025950:intron 20.0%
!! GTCAAAAATTTATCACAAAA+TGG + chr1_1:49554212-49554231 Msa0025950:intron 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG - chr1_1:49554537-49554556 None:intergenic 20.0%
!! TTCAAAAGTTTCAAACTAAA+AGG + chr1_1:49554543-49554562 Msa0025950:intron 20.0%
!!! TAAGAAATGCCTTTTATAAT+AGG + chr1_1:49555719-49555738 Msa0025950:intron 20.0%
!! ACTTTACAACCTATTATAAA+AGG - chr1_1:49555731-49555750 None:intergenic 20.0%
!!! TTTTTTTTCCTTAATAGGAT+AGG + chr1_1:49555777-49555796 Msa0025950:intron 20.0%
!! ACTCCATAATTCATATATAT+CGG + chr1_1:49556150-49556169 Msa0025950:intron 20.0%
!! AGAAATTAAGATATGTTGAT+TGG - chr1_1:49556445-49556464 None:intergenic 20.0%
!!! AAAACATAATGGAAATGAAT+TGG - chr1_1:49556527-49556546 None:intergenic 20.0%
!! TATAAGATATTATCCTTCAA+CGG + chr1_1:49556737-49556756 Msa0025950:intron 20.0%
!! ATAAATCTATGGAATATTGA+AGG - chr1_1:49557312-49557331 None:intergenic 20.0%
!!! TATTCCATAGATTTATTTCT+TGG + chr1_1:49556921-49556940 Msa0025950:intron 20.0%
!!! AACTTCTTTTTCTTTATCAA+AGG - chr1_1:49556978-49556997 None:intergenic 20.0%
!!! GATTTTTTATTTGGATGTAA+TGG + chr1_1:49557134-49557153 Msa0025950:intron 20.0%
!!! TATTCCATAGATTTATTTCT+TGG - chr1_1:49556921-49556940 None:intergenic 20.0%
!! ATAAATCTATGGAATATTGA+AGG + chr1_1:49557312-49557331 Msa0025950:CDS 20.0%
!! TTTATTATAATGTCTTGCTT+TGG + chr1_1:49548158-49548177 Msa0025950:five_prime_UTR 20.0%
!! TATAAGATATTATCCTTCAA+AGG - chr1_1:49556737-49556756 None:intergenic 20.0%
!! ATACTTGCTCAAAAAAAAAA+AGG - chr1_1:49548331-49548350 None:intergenic 20.0%
!! TATATCTTCATGTAAATAAC+TGG - chr1_1:49548423-49548442 None:intergenic 20.0%
!! CATATAAAACTTGATGAAAA+TGG + chr1_1:49548504-49548523 Msa0025950:five_prime_UTR 20.0%
!!! AAAAAACAATTTTTGTGGAT+GGG - chr1_1:49548748-49548767 None:intergenic 20.0%
!!! TAAAAAACAATTTTTGTGGA+TGG - chr1_1:49548749-49548768 None:intergenic 20.0%
!!! TAATATAATTGAAGCACTAA+TGG + chr1_1:49548843-49548862 Msa0025950:intron 20.0%
!! CAATAACACATTTAAAGATA+AGG - chr1_1:49549039-49549058 None:intergenic 20.0%
!! TAATAAGTTTCCATCATTAT+AGG + chr1_1:49558563-49558582 Msa0025950:intron 20.0%
!! TTTCTTTAATATGTTATGTG+TGG + chr1_1:49549539-49549558 Msa0025950:intron 20.0%
!!! TTTATATATCGATTATATGG+AGG - chr1_1:49549840-49549859 None:intergenic 20.0%
!! GAAACTAAATGAATAATTTC+AGG - chr1_1:49549932-49549951 None:intergenic 20.0%
!! CATCATCATTATAATATGTT+TGG + chr1_1:49560824-49560843 Msa0025950:intron 20.0%
!! GCAATTATAAAAACAATTGA+AGG - chr1_1:49561020-49561039 None:intergenic 20.0%
!! AGAAAAAGTCAAAACAATTA+AGG + chr1_1:49551299-49551318 Msa0025950:intron 20.0%
!! ATAATTATCCAATCAACAAA+TGG - chr1_1:49561255-49561274 None:intergenic 20.0%
!!! CAAAAGTAAGTAATTTTTTG+TGG + chr1_1:49551730-49551749 Msa0025950:intron 20.0%
!!! TCGGTTAATTTATCTATTTT+AGG + chr1_1:49561566-49561585 Msa0025950:intron 20.0%
!!! CGGTTAATTTATCTATTTTA+GGG + chr1_1:49561567-49561586 Msa0025950:intron 20.0%
! GACATTATAATAAAGATAGC+AGG - chr1_1:49548152-49548171 None:intergenic 25.0%
! AAGATATAATGAATTGAGCT+TGG + chr1_1:49548435-49548454 Msa0025950:five_prime_UTR 25.0%
! ATCAAAGTCAAAAATGTCAA+GGG + chr1_1:49548528-49548547 Msa0025950:five_prime_UTR 25.0%
! TCGATAAAGATATCTACATT+TGG - chr1_1:49548801-49548820 None:intergenic 25.0%
! TGGCAAAATTAAATAAGAGA+AGG + chr1_1:49548863-49548882 Msa0025950:intron 25.0%
!! GATTAATTACCTTTGAAAGA+AGG - chr1_1:49548967-49548986 None:intergenic 25.0%
!!! ATAATGATGGAAACTTGTTA+TGG - chr1_1:49549341-49549360 None:intergenic 25.0%
! TAACAAGTTTCCATCATTAT+AGG + chr1_1:49549341-49549360 Msa0025950:intron 25.0%
! TTTAATATGTTATGTGTGGA+AGG + chr1_1:49549543-49549562 Msa0025950:intron 25.0%
! TTGATAGAAAATCTAGACAT+AGG - chr1_1:49549902-49549921 None:intergenic 25.0%
!!! TGTTTTTGTGCAAGTTTTTT+TGG + chr1_1:49550582-49550601 Msa0025950:intron 25.0%
!!! CAAGTTTTTTTGGTGTATTA+AGG + chr1_1:49550592-49550611 Msa0025950:intron 25.0%
! TCATTTGGAAAACTAAGATT+TGG + chr1_1:49550681-49550700 Msa0025950:intron 25.0%
! TAGTCAATTTAATCCATAAC+TGG + chr1_1:49550825-49550844 Msa0025950:intron 25.0%
!! TCTTTTTATCTATCCAGTTA+TGG - chr1_1:49550841-49550860 None:intergenic 25.0%
!! GAAACTTTCTTTTAAGCATA+TGG + chr1_1:49551014-49551033 Msa0025950:intron 25.0%
! TATGAACCATAAAACAGATA+TGG + chr1_1:49551384-49551403 Msa0025950:intron 25.0%
! TTTCCTCTATATCAATAGAT+GGG - chr1_1:49551467-49551486 None:intergenic 25.0%
! ATAGTTATCCAATCAACATA+TGG - chr1_1:49551492-49551511 None:intergenic 25.0%
! CCGGTTAATTTATCTATTTA+AGG + chr1_1:49551797-49551816 Msa0025950:intron 25.0%
! CCAGTAAAAAATTATTGTCA+CGG + chr1_1:49551912-49551931 Msa0025950:intron 25.0%
! AATTGTACCATACAAACATT+TGG + chr1_1:49551970-49551989 Msa0025950:intron 25.0%
! AAAAGATGCATTTGAATCAT+TGG + chr1_1:49552234-49552253 Msa0025950:intron 25.0%
! TAAAGAGTTCTTACTGATAT+TGG + chr1_1:49552376-49552395 Msa0025950:intron 25.0%
! ATGATTATAGAGTAAAGTTC+AGG + chr1_1:49552403-49552422 Msa0025950:intron 25.0%
! AAAATTATTGTCACGGATAT+AGG - chr1_1:49551919-49551938 None:intergenic 25.0%
! CCAGTAAAAAATTATTGTCA+CGG - chr1_1:49551912-49551931 None:intergenic 25.0%
!! ATTCTAATTTATCCTTTTCC+GGG - chr1_1:49551825-49551844 None:intergenic 25.0%
! AATCTCAATGTCTTTCTTAA+TGG - chr1_1:49553472-49553491 None:intergenic 25.0%
! ATTTGTCTCCTTAAAATACA+AGG - chr1_1:49553596-49553615 None:intergenic 25.0%
! TCAAAAATTTAGTCTCTTCT+TGG + chr1_1:49553616-49553635 Msa0025950:intron 25.0%
!! AAAAAAGAGTGATAGTGATA+AGG - chr1_1:49553921-49553940 None:intergenic 25.0%
! ATTTAAAAGGTGAATTGTGA+TGG - chr1_1:49553981-49554000 None:intergenic 25.0%
!! TATTTTTCTCCCCTTTTTAT+TGG + chr1_1:49554038-49554057 Msa0025950:intron 25.0%
!!! TGTTTTTGTCCAATAAAAAG+GGG - chr1_1:49554050-49554069 None:intergenic 25.0%
!!! CTTGTTTTTGTCCAATAAAA+AGG - chr1_1:49554052-49554071 None:intergenic 25.0%
!!! TTTTTTCTCTCCATTGTTTT+CGG - chr1_1:49554257-49554276 None:intergenic 25.0%
! TTGAAACTTTCGAAACTTAA+AGG - chr1_1:49554478-49554497 None:intergenic 25.0%
! TATGTAGATTTCAAATACCA+AGG - chr1_1:49554812-49554831 None:intergenic 25.0%
!!! GTTTAGTGTTTTTTTTGCTT+AGG - chr1_1:49554836-49554855 None:intergenic 25.0%
!!! ATGCAATACAATTGATTTGT+TGG + chr1_1:49555135-49555154 Msa0025950:intron 25.0%
!!! TGCAATACAATTGATTTGTT+GGG + chr1_1:49555136-49555155 Msa0025950:intron 25.0%
!! GTTTTGTGTTTAAAAAGAAC+TGG + chr1_1:49555517-49555536 Msa0025950:intron 25.0%
! TGTTTAATCCTATCCTATTA+AGG - chr1_1:49555788-49555807 None:intergenic 25.0%
!!! AGAATTTTTCAAGATACAGT+TGG + chr1_1:49555883-49555902 Msa0025950:intron 25.0%
!!! TCTTGATGTTATTTTTCTAG+AGG + chr1_1:49556015-49556034 Msa0025950:intron 25.0%
! AATGATAATTAGCTGCTTAT+TGG - chr1_1:49556082-49556101 None:intergenic 25.0%
! CTCCATAATTCATATATATC+GGG + chr1_1:49556151-49556170 Msa0025950:intron 25.0%
! TAAATTGGATGTTTATATGC+AGG + chr1_1:49556471-49556490 Msa0025950:intron 25.0%
!!! TTTATTATAAGGTGTTGCTT+TGG - chr1_1:49556846-49556865 None:intergenic 25.0%
! TGAACCAAGAAATAAATCTA+TGG - chr1_1:49557301-49557320 None:intergenic 25.0%
! AAAGGATAACAAATTCTTGT+TGG - chr1_1:49557269-49557288 None:intergenic 25.0%
! ATTGAACAGCAATATTGTAT+TGG + chr1_1:49557042-49557061 Msa0025950:intron 25.0%
! TTGAACAGCAATATTGTATT+GGG + chr1_1:49557043-49557062 Msa0025950:intron 25.0%
! AATACCAAATAACAACTGAT+GGG - chr1_1:49557093-49557112 None:intergenic 25.0%
! TAATACCAAATAACAACTGA+TGG - chr1_1:49557094-49557113 None:intergenic 25.0%
! TTGAACAACAGTATTGTATT+TGG - chr1_1:49557192-49557211 None:intergenic 25.0%
! GTTGTTCAATAAAGAAACAA+AGG + chr1_1:49557203-49557222 Msa0025950:intron 25.0%
! GACAATAACTTCTTTATCAA+AGG + chr1_1:49557251-49557270 Msa0025950:intron 25.0%
! AAAGGATAACAAATTCTTGT+TGG + chr1_1:49557269-49557288 Msa0025950:CDS 25.0%
! TGAACCAAGAAATAAATCTA+TGG + chr1_1:49557301-49557320 Msa0025950:CDS 25.0%
! AAGATATAATGAATTGAGCT+TGG + chr1_1:49548435-49548454 Msa0025950:five_prime_UTR 25.0%
! ATCAAAGTCAAAAATGTCAA+GGG + chr1_1:49548528-49548547 Msa0025950:five_prime_UTR 25.0%
! TCGATAAAGATATCTACATT+TGG - chr1_1:49548801-49548820 None:intergenic 25.0%
! TGGCAAAATTAAATAAGAGA+AGG + chr1_1:49548863-49548882 Msa0025950:intron 25.0%
!! GATTAATTACCTTTGAAAGA+AGG - chr1_1:49548967-49548986 None:intergenic 25.0%
! ACTAATGCCTACTAATTTAT+TGG + chr1_1:49558689-49558708 Msa0025950:intron 25.0%
! TTAGTGACCAATAAATTAGT+AGG - chr1_1:49558699-49558718 None:intergenic 25.0%
! TTTAATATGTTATGTGTGGT+AGG + chr1_1:49558791-49558810 Msa0025950:intron 25.0%
! TATAACTAAGCAGAAAAGTA+AGG - chr1_1:49549574-49549593 None:intergenic 25.0%
! ACCAATTTGAATTACAATAG+AGG + chr1_1:49558898-49558917 Msa0025950:intron 25.0%
! TCCTCTATTGTAATTCAAAT+TGG - chr1_1:49558902-49558921 None:intergenic 25.0%
! TTGATAGAAAATCTAGACAT+AGG - chr1_1:49549902-49549921 None:intergenic 25.0%
! ACATATCTGAATTTCTTAGT+GGG - chr1_1:49559553-49559572 None:intergenic 25.0%
! TACATATCTGAATTTCTTAG+TGG - chr1_1:49559554-49559573 None:intergenic 25.0%
!!! AACAAGATGCATCTTATTTT+CGG - chr1_1:49560464-49560483 None:intergenic 25.0%
!! GAAACTTTCTTTTAAGCATA+TGG + chr1_1:49551014-49551033 Msa0025950:intron 25.0%
!! AATCTTTTGAACAAAAGAAC+TGG - chr1_1:49561103-49561122 None:intergenic 25.0%
! TGTTTACGACAAATTATGTT+TGG + chr1_1:49561173-49561192 Msa0025950:intron 25.0%
! ATCCAATTCCATTATACTTA+GGG - chr1_1:49561412-49561431 None:intergenic 25.0%
! TATCCAATTCCATTATACTT+AGG - chr1_1:49561413-49561432 None:intergenic 25.0%
! TCTGTTGCCTTATATATTAT+CGG + chr1_1:49551777-49551796 Msa0025950:intron 25.0%
! CCAGTAAAAAATTATTGTCA+CGG + chr1_1:49551912-49551931 Msa0025950:intron 25.0%
ATTATAATGTCTTGCTTTGG+TGG + chr1_1:49548161-49548180 Msa0025950:five_prime_UTR 30.0%
AAAGTGAGGATTCATAAGTA+TGG + chr1_1:49548210-49548229 Msa0025950:five_prime_UTR 30.0%
ATTCACTTTGATTGTCACTA+TGG + chr1_1:49548462-49548481 Msa0025950:five_prime_UTR 30.0%
CATCAAAGTCAAAAATGTCA+AGG + chr1_1:49548527-49548546 Msa0025950:five_prime_UTR 30.0%
TGCATGATCATAGTATACTT+TGG - chr1_1:49548707-49548726 None:intergenic 30.0%
GTAATTGATAGATATGCTCT+TGG + chr1_1:49548885-49548904 Msa0025950:intron 30.0%
CAGAGTTCAATCGTAATTAA+TGG - chr1_1:49548923-49548942 None:intergenic 30.0%
! TGTGTTATTGAATTGTGTAG+TGG + chr1_1:49549049-49549068 Msa0025950:intron 30.0%
AAAAGATGTCCAATGTCAAA+TGG + chr1_1:49549074-49549093 Msa0025950:CDS 30.0%
ATATTCAGACCATTTGACAT+TGG - chr1_1:49549086-49549105 None:intergenic 30.0%
TCTGAATATGTTGAAGTGAA+AGG + chr1_1:49549097-49549116 Msa0025950:CDS 30.0%
CTGAATATGTTGAAGTGAAA+GGG + chr1_1:49549098-49549117 Msa0025950:CDS 30.0%
ACTATCTCCTTTGTTAATAG+GGG - chr1_1:49549219-49549238 None:intergenic 30.0%
CACTATCTCCTTTGTTAATA+GGG - chr1_1:49549220-49549239 None:intergenic 30.0%
!!! AAAGGAGATAGTGGAATTTT+AGG + chr1_1:49549227-49549246 Msa0025950:intron 30.0%
AGTTTCCATCATTATAGGAA+TGG + chr1_1:49549346-49549365 Msa0025950:intron 30.0%
CTAGTGACCAATAAATTACT+AGG - chr1_1:49549477-49549496 None:intergenic 30.0%
ACCAATTTGAATTACCATAG+AGG + chr1_1:49549650-49549669 Msa0025950:intron 30.0%
TCCTCTATGGTAATTCAAAT+TGG - chr1_1:49549654-49549673 None:intergenic 30.0%
AGAATCAATTTCATCCTCTA+TGG - chr1_1:49549667-49549686 None:intergenic 30.0%
! TAGAGGATGAAATTGATTCT+AGG + chr1_1:49549667-49549686 Msa0025950:intron 30.0%
GACAAGAGTAACATTAAGTT+GGG - chr1_1:49549974-49549993 None:intergenic 30.0%
ACAGATCTGAATTTCTTAGT+GGG - chr1_1:49550306-49550325 None:intergenic 30.0%
TACAGATCTGAATTTCTTAG+TGG - chr1_1:49550307-49550326 None:intergenic 30.0%
CAAGAGATCTATTTAACATG+AGG - chr1_1:49550409-49550428 None:intergenic 30.0%
GTTAAATAGATCTCTTGCTT+TGG + chr1_1:49550412-49550431 Msa0025950:intron 30.0%
!! ATCTACTCAAAAGCTGATTT+TGG + chr1_1:49550456-49550475 Msa0025950:intron 30.0%
!! TAAAGCTTACCACTTTTGTT+TGG - chr1_1:49550532-49550551 None:intergenic 30.0%
AACAAAAGTGGTAAGCTTTA+TGG + chr1_1:49550532-49550551 Msa0025950:intron 30.0%
!!! CTATTTTAACTTTGACAGCT+TGG - chr1_1:49550622-49550641 None:intergenic 30.0%
! AAGTTGATTACAACACCATA+AGG - chr1_1:49550713-49550732 None:intergenic 30.0%
GAAAACCATAGATTGACTAA+AGG - chr1_1:49550963-49550982 None:intergenic 30.0%
! TGAAAAAGCAGCTTTTAGAT+AGG - chr1_1:49551042-49551061 None:intergenic 30.0%
TATGGTTCATAAGAATTCCA+AGG - chr1_1:49553158-49553177 None:intergenic 30.0%
! ACAGTACCATATCTGTTTTA+TGG - chr1_1:49551393-49551412 None:intergenic 30.0%
TGTTTACGACAAATTCTGTT+TGG + chr1_1:49551410-49551429 Msa0025950:intron 30.0%
GTTTCCTCTATATCAATAGA+TGG - chr1_1:49551468-49551487 None:intergenic 30.0%
CTTAACTATAGATGGATGTA+TGG - chr1_1:49551520-49551539 None:intergenic 30.0%
TGCATCATGAAGCAAATATA+TGG + chr1_1:49551544-49551563 Msa0025950:intron 30.0%
! AGCAAATATATGGACTGAAA+AGG + chr1_1:49551554-49551573 Msa0025950:intron 30.0%
! GCAAATATATGGACTGAAAA+GGG + chr1_1:49551555-49551574 Msa0025950:intron 30.0%
!! TTGATTTGTACTCCTCATAT+TGG + chr1_1:49551609-49551628 Msa0025950:intron 30.0%
CACCCTAAGTATAATGAAAT+TGG + chr1_1:49551644-49551663 Msa0025950:intron 30.0%
CTGTTGCCTTATATATTATC+CGG + chr1_1:49551778-49551797 Msa0025950:intron 30.0%
!!! CCGTGACAATAATTTTTTAC+TGG - chr1_1:49552611-49552630 Msa0025960:CDS 30.0%
ATGTACACCAAATGTTTGTA+TGG - chr1_1:49551980-49551999 None:intergenic 30.0%
TTTACGAGGTAACTTAACAA+AGG - chr1_1:49552105-49552124 Msa0025960:CDS 30.0%
ATTATAGAGCAAAGTTTACG+AGG - chr1_1:49552119-49552138 Msa0025960:intron 30.0%
! TAAAGAGTTCTGACTGATAT+TGG - chr1_1:49552149-49552168 Msa0025960:intron 30.0%
ATTATAGAGTAAAGTTCAGG+AGG + chr1_1:49552406-49552425 Msa0025950:intron 30.0%
CATCTGAAAAAGAAAAACAC+AGG + chr1_1:49552453-49552472 Msa0025950:intron 30.0%
AATTGTACCACACAAACATT+TGG - chr1_1:49552556-49552575 Msa0025960:intron 30.0%
!!! CCGTGACAATAATTTTTTAC+TGG + chr1_1:49552611-49552630 Msa0025950:intron 30.0%
ATCCAATTCCATTATACCAA+TGG + chr1_1:49552883-49552902 Msa0025950:intron 30.0%
! GCAAATATATGGACTGAAAA+GGG - chr1_1:49551555-49551574 None:intergenic 30.0%
! AGCAAATATATGGACTGAAA+AGG - chr1_1:49551554-49551573 None:intergenic 30.0%
CGCAAATACTTATCTATAGA+TGG + chr1_1:49553004-49553023 Msa0025950:intron 30.0%
CTTATCTATAGATGGATGTA+TGG + chr1_1:49553012-49553031 Msa0025950:intron 30.0%
ATAGTTATCCAATCAACAGA+TGG + chr1_1:49553040-49553059 Msa0025950:intron 30.0%
TGTTTCCGACAAATACTATT+TGG - chr1_1:49553122-49553141 None:intergenic 30.0%
! CAGTTTGCATATCCTTTTTA+TGG + chr1_1:49553140-49553159 Msa0025950:intron 30.0%
TATGGTTCATAAGAATTCCA+AGG + chr1_1:49553158-49553177 Msa0025950:intron 30.0%
!!! ATGGTTTGTTTTCATTTTCC+AGG - chr1_1:49553215-49553234 None:intergenic 30.0%
AGAATCCATTAATCTCTTGT+CGG - chr1_1:49553325-49553344 None:intergenic 30.0%
AAATTTGACATGTGTTTCGA+TGG - chr1_1:49553378-49553397 None:intergenic 30.0%
AATCAAGTATGTCTCTTTAC+TGG - chr1_1:49553425-49553444 None:intergenic 30.0%
! GACAACATATTATGGTGTTA+AGG + chr1_1:49553519-49553538 Msa0025950:intron 30.0%
! TGTTTTTCTCCAGTTTTCTA+CGG + chr1_1:49553706-49553725 Msa0025950:intron 30.0%
ATGAGCAATAAAGTTAGTTG+AGG + chr1_1:49553811-49553830 Msa0025950:intron 30.0%
TGAGCAATAAAGTTAGTTGA+GGG + chr1_1:49553812-49553831 Msa0025950:intron 30.0%
TAAGGCAATACTTGTAGATT+AGG - chr1_1:49553903-49553922 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr1_1:49554145-49554164 Msa0025950:intron 30.0%
AAAAAGGAAGAGAGAGAATA+AGG + chr1_1:49554161-49554180 Msa0025950:intron 30.0%
AAAAGGAAGAGAGAGAATAA+GGG + chr1_1:49554162-49554181 Msa0025950:intron 30.0%
TATCATTTCTCCGAAAACAA+TGG + chr1_1:49554244-49554263 Msa0025950:intron 30.0%
! ACACTATATGCATAGAGTTT+TGG + chr1_1:49554400-49554419 Msa0025950:intron 30.0%
AAAGGACCAAAAATGGTATT+TGG - chr1_1:49554429-49554448 None:intergenic 30.0%
CAAACTAAAAGGACCAAAAA+TGG - chr1_1:49554436-49554455 None:intergenic 30.0%
GAGAATTCTGTCAAACTAAA+AGG - chr1_1:49554447-49554466 None:intergenic 30.0%
GAAACTTAAAGGACTAACTT+GGG - chr1_1:49554467-49554486 None:intergenic 30.0%
TGAAACTTAAAGGACTAACT+TGG - chr1_1:49554527-49554546 None:intergenic 30.0%
CTTCATTCATTTCTACTGAT+GGG - chr1_1:49554876-49554895 None:intergenic 30.0%
TCTTCATTCATTTCTACTGA+TGG - chr1_1:49554877-49554896 None:intergenic 30.0%
TGCATAGATGATCAAATCTT+TGG - chr1_1:49555120-49555139 None:intergenic 30.0%
CATCAAGATAAGTGAAGAAA+TGG - chr1_1:49555206-49555225 None:intergenic 30.0%
TTTGTCCAATGGGTAAAAAT+AGG - chr1_1:49555230-49555249 None:intergenic 30.0%
! AGGAAGTGTATCTGAAAAAT+AGG - chr1_1:49555942-49555961 None:intergenic 30.0%
CACCCGATATATATGAATTA+TGG - chr1_1:49556156-49556175 None:intergenic 30.0%
TCCATGATCACTTGTTTAAA+AGG + chr1_1:49556341-49556360 Msa0025950:intron 30.0%
TAATAATTCATCACACTCCA+TGG + chr1_1:49556553-49556572 Msa0025950:intron 30.0%
ATTCACTTTGATTGTTACCA+TGG - chr1_1:49556573-49556592 None:intergenic 30.0%
GCTGTTCAATAAAGAAACAA+AGG - chr1_1:49557032-49557051 None:intergenic 30.0%
ATACCAAATAACAACTGATG+GGG - chr1_1:49557092-49557111 None:intergenic 30.0%
!! TATTTGGATGTAATGGATGA+TGG + chr1_1:49557141-49557160 Msa0025950:intron 30.0%
!! ATTTGGATGTAATGGATGAT+GGG + chr1_1:49557142-49557161 Msa0025950:intron 30.0%
GACATTATAATAAAGCTAGC+AGG - chr1_1:49557375-49557394 None:intergenic 30.0%
ATTATAATGTCTTGCTTTGG+TGG + chr1_1:49548161-49548180 Msa0025950:five_prime_UTR 30.0%
AAAGTGAGGATTCATAAGTA+TGG + chr1_1:49548210-49548229 Msa0025950:five_prime_UTR 30.0%
ATTCACTTTGATTGTCACTA+TGG + chr1_1:49548462-49548481 Msa0025950:five_prime_UTR 30.0%
CATCAAAGTCAAAAATGTCA+AGG + chr1_1:49548527-49548546 Msa0025950:five_prime_UTR 30.0%
TGCATGATCATAGTATACTT+TGG - chr1_1:49548707-49548726 None:intergenic 30.0%
CAGAGTTCAATCGTAATTAA+TGG - chr1_1:49548923-49548942 None:intergenic 30.0%
! TGTGTTATTGAATTGTGTAG+TGG + chr1_1:49549049-49549068 Msa0025950:intron 30.0%
AAAAGATGTCCAATGTCAAA+TGG + chr1_1:49549074-49549093 Msa0025950:CDS 30.0%
ATATTCAGACCATTTGACAT+TGG - chr1_1:49549086-49549105 None:intergenic 30.0%
TCTGAATATGTTGAAGTGAA+AGG + chr1_1:49549097-49549116 Msa0025950:CDS 30.0%
CTGAATATGTTGAAGTGAAA+GGG + chr1_1:49549098-49549117 Msa0025950:CDS 30.0%
ACTATCTCCTTTGTTAATAG+GGG - chr1_1:49549219-49549238 None:intergenic 30.0%
CACTATCTCCTTTGTTAATA+GGG - chr1_1:49549220-49549239 None:intergenic 30.0%
!!! AAAGGAGATAGTGGAATTTT+AGG + chr1_1:49549227-49549246 Msa0025950:intron 30.0%
AGTTTCCATCATTATAGGAA+TGG + chr1_1:49549346-49549365 Msa0025950:intron 30.0%
TATATTAGGGTCCAATAATC+AGG - chr1_1:49558608-49558627 None:intergenic 30.0%
! TAGAGGATGAAATTGATTCT+AGG + chr1_1:49549667-49549686 Msa0025950:intron 30.0%
TTCTAGGTAATCTCTTGTAT+TGG + chr1_1:49558931-49558950 Msa0025950:intron 30.0%
AATCTCTTGTATTGGAAAGA+AGG + chr1_1:49558939-49558958 Msa0025950:intron 30.0%
GACAAGAGTAACATTAAGTT+GGG - chr1_1:49549974-49549993 None:intergenic 30.0%
GTATCTGAACAATTACTCTA+AGG + chr1_1:49559571-49559590 Msa0025950:intron 30.0%
CAAGAGATCTATTTAACATG+AGG - chr1_1:49550409-49550428 None:intergenic 30.0%
GTTAAATAGATCTCTTGCTT+TGG + chr1_1:49550412-49550431 Msa0025950:intron 30.0%
!! ATCTTCTCAAAAGCTGATTT+TGG + chr1_1:49559703-49559722 Msa0025950:intron 30.0%
! AACAAGATGCATCTTCTTTT+CGG - chr1_1:49560007-49560026 None:intergenic 30.0%
AAGATGCATCTTGTTGATAT+AGG + chr1_1:49560012-49560031 Msa0025950:intron 30.0%
GAAGGCTTATAAGAATTGTT+TGG - chr1_1:49560043-49560062 None:intergenic 30.0%
AAGATGCATCTTGTTGATAT+AGG + chr1_1:49560012-49560031 Msa0025950:intron 30.0%
GAAGGCTTATAAGAATTGTT+TGG - chr1_1:49560043-49560062 None:intergenic 30.0%
AAGGAAGATATCTCAATGTA+GGG + chr1_1:49560662-49560681 Msa0025950:intron 30.0%
GGAAACAATAGATTGACTAA+AGG - chr1_1:49560727-49560746 None:intergenic 30.0%
TACGAACCATAAAACAGATA+TGG + chr1_1:49561147-49561166 Msa0025950:intron 30.0%
! ACAGTACCATATCTGTTTTA+TGG - chr1_1:49551393-49551412 None:intergenic 30.0%
CTTAACTATAGATGGATGTA+TGG - chr1_1:49551520-49551539 None:intergenic 30.0%
TGCATCATGAAGCAAATATA+TGG + chr1_1:49551544-49551563 Msa0025950:intron 30.0%
! AGCAAATATATGGACTGAAA+AGG + chr1_1:49551554-49551573 Msa0025950:intron 30.0%
! GCAAATATATGGACTGAAAA+GGG + chr1_1:49551555-49551574 Msa0025950:intron 30.0%
!! TTGATTTGTACTCCTCATAT+TGG + chr1_1:49551609-49551628 Msa0025950:intron 30.0%
!!! CCGTGACAATAATTTTTTAC+TGG - chr1_1:49552611-49552630 Msa0025960:CDS 30.0%
TAATAAAGATAGCAGGCCTA+TGG - chr1_1:49548145-49548164 None:intergenic 35.0%
TTTCATTGCTAGTGAAAGTG+AGG + chr1_1:49548196-49548215 Msa0025950:five_prime_UTR 35.0%
GAATGAACACAATCCTTTGA+AGG + chr1_1:49548251-49548270 Msa0025950:five_prime_UTR 35.0%
CCATTTCACGGAATCTAATT+TGG - chr1_1:49548557-49548576 None:intergenic 35.0%
CCAAATTAGATTCCGTGAAA+TGG + chr1_1:49548554-49548573 Msa0025950:five_prime_UTR 35.0%
!! TTTTGAAGGTAGCCATTTCA+CGG - chr1_1:49548569-49548588 None:intergenic 35.0%
! TATCGAGTTTGAAGCACTAA+TGG + chr1_1:49548815-49548834 Msa0025950:intron 35.0%
GGCAATTGTAGAAACAGTTA+GGG - chr1_1:49548946-49548965 None:intergenic 35.0%
AGGCAATTGTAGAAACAGTT+AGG - chr1_1:49548947-49548966 None:intergenic 35.0%
CTACAATTGCCTTCTTTCAA+AGG + chr1_1:49548955-49548974 Msa0025950:intron 35.0%
!! CGGTTGATGGTAAGAAAAAT+AGG + chr1_1:49549181-49549200 Msa0025950:intron 35.0%
CCACTATCTCCTTTGTTAAT+AGG - chr1_1:49549221-49549240 None:intergenic 35.0%
CCTATTAACAAAGGAGATAG+TGG + chr1_1:49549218-49549237 Msa0025950:intron 35.0%
GCTATTGAAGTCCTGATTAT+TGG + chr1_1:49549372-49549391 Msa0025950:intron 35.0%
TATATCAGGGTCCAATAATC+AGG - chr1_1:49549386-49549405 None:intergenic 35.0%
CAGCATGAGTTTATCAACTA+CGG + chr1_1:49549435-49549454 Msa0025950:intron 35.0%
AGATCCTTCTTTCCAATACA+GGG - chr1_1:49549699-49549718 None:intergenic 35.0%
AAGATCCTTCTTTCCAATAC+AGG - chr1_1:49549700-49549719 None:intergenic 35.0%
AAAGAAGGATCTTCAAGACT+TGG + chr1_1:49549707-49549726 Msa0025950:intron 35.0%
! TATCGATTATATGGAGGACT+AGG - chr1_1:49549834-49549853 None:intergenic 35.0%
GGACAAGAGTAACATTAAGT+TGG - chr1_1:49549975-49549994 None:intergenic 35.0%
TCTCTCTCTAACTTTCTATC+AGG - chr1_1:49549996-49550015 None:intergenic 35.0%
ATAGAAAGTTAGAGAGAGAG+AGG + chr1_1:49549997-49550016 Msa0025950:intron 35.0%
GTATCTGAACCATTACTCTA+AGG + chr1_1:49550324-49550343 Msa0025950:intron 35.0%
ATCTATTTAACATGAGGTGG+CGG - chr1_1:49550403-49550422 None:intergenic 35.0%
GAGATCTATTTAACATGAGG+TGG - chr1_1:49550406-49550425 None:intergenic 35.0%
!! ATCAGCTTTTGAGTAGATGA+TGG - chr1_1:49550454-49550473 None:intergenic 35.0%
! GCTTTATGGTTTTTCTCTAC+CGG + chr1_1:49550546-49550565 Msa0025950:intron 35.0%
ATAGCACACTACATGTTTGT+TGG + chr1_1:49550638-49550657 Msa0025950:intron 35.0%
TGGAAAACTAAGATTTGGCA+AGG + chr1_1:49550686-49550705 Msa0025950:intron 35.0%
CTGGATAGATAAAAAGACTG+TGG + chr1_1:49550844-49550863 Msa0025950:intron 35.0%
ATATCTCAATGCAGAGAGTT+AGG + chr1_1:49550905-49550924 Msa0025950:intron 35.0%
!!! GAGAGTTAGGTTTTAGATGT+TGG + chr1_1:49550918-49550937 Msa0025950:intron 35.0%
!!! GGTTTTAGATGTTGGTTTAG+TGG + chr1_1:49550926-49550945 Msa0025950:intron 35.0%
!! GTTAGCCTTTAGTCAATCTA+TGG + chr1_1:49550955-49550974 Msa0025950:intron 35.0%
TTTCGTTGATCATGTGTTTG+TGG + chr1_1:49550979-49550998 Msa0025950:intron 35.0%
TTCGTTGATCATGTGTTTGT+GGG + chr1_1:49550980-49550999 Msa0025950:intron 35.0%
CATGTGTTTGTGGGATTTAA+TGG + chr1_1:49550989-49551008 Msa0025950:intron 35.0%
ATTGCATGCATTCAGTTTCT+AGG - chr1_1:49551141-49551160 None:intergenic 35.0%
TTTGACATGTGTTTCGATAG+AGG + chr1_1:49551160-49551179 Msa0025950:intron 35.0%
ATGATCCATTAATCTCTCGT+CGG + chr1_1:49551210-49551229 Msa0025950:intron 35.0%
AGATTCCAAGTTAATGTCCT+TGG + chr1_1:49551355-49551374 Msa0025950:intron 35.0%
GAATTCCAAGGACATTAACT+TGG - chr1_1:49553170-49553189 None:intergenic 35.0%
AGGAAACACCATATGTTGAT+TGG + chr1_1:49551481-49551500 Msa0025950:intron 35.0%
TGCAGACACTTAACTATAGA+TGG - chr1_1:49551528-49551547 None:intergenic 35.0%
AAGCACTTCACAATATGCAA+GGG - chr1_1:49552942-49552961 Msa0025960:five_prime_UTR 35.0%
! AAAGCACTTCACAATATGCA+AGG - chr1_1:49552941-49552960 Msa0025960:five_prime_UTR 35.0%
CATTATACTTAGGGTGATGT+AGG - chr1_1:49551640-49551659 None:intergenic 35.0%
ATTGGATAGAAATTCACCTC+TGG + chr1_1:49551662-49551681 Msa0025950:intron 35.0%
!! ACCACATACAAGAAGTACTT+TGG + chr1_1:49551706-49551725 Msa0025950:intron 35.0%
! TCCAAAGTACTTCTTGTATG+TGG - chr1_1:49552823-49552842 Msa0025960:CDS 35.0%
AAACATGTCTTGCCTTAAGT+AGG - chr1_1:49551890-49551909 None:intergenic 35.0%
GCATTTGAATCAAATGCAGA+GGG - chr1_1:49552284-49552303 Msa0025960:CDS 35.0%
TGCATTTGAATCAAATGCAG+AGG - chr1_1:49552285-49552304 Msa0025960:CDS 35.0%
!! ATTTGGTGTTCATAAAAGCG+CGG - chr1_1:49552539-49552558 Msa0025960:intron 35.0%
ATGAACACCAAATGTTTGTG+TGG + chr1_1:49552546-49552565 Msa0025950:intron 35.0%
TATAGGCAAGTGAAAGATAG+AGG - chr1_1:49552590-49552609 Msa0025960:CDS 35.0%
! TGAATGTAATGTCTGAAACC+CGG + chr1_1:49552680-49552699 Msa0025950:intron 35.0%
! TCCAAAGTACTTCTTGTATG+TGG + chr1_1:49552823-49552842 Msa0025950:intron 35.0%
!! ACCACATACAAGAAGTACTT+TGG - chr1_1:49551706-49551725 None:intergenic 35.0%
! CACCATTGGTATAATGGAAT+TGG - chr1_1:49552888-49552907 Msa0025960:exon 35.0%
CTACATCACCATTGGTATAA+TGG - chr1_1:49552894-49552913 Msa0025960:exon 35.0%
! CATTATACCAATGGTGATGT+AGG + chr1_1:49552892-49552911 Msa0025950:intron 35.0%
!! TTGATTTGTACTCCTCGTAA+TGG - chr1_1:49552923-49552942 Msa0025960:five_prime_UTR 35.0%
! AAAGCACTTCACAATATGCA+AGG + chr1_1:49552941-49552960 Msa0025950:intron 35.0%
AAGCACTTCACAATATGCAA+GGG + chr1_1:49552942-49552961 Msa0025950:intron 35.0%
TGCGTCATGAAGCAAATATA+TGG - chr1_1:49552988-49553007 None:intergenic 35.0%
GTTTCCTCTATAGCAATAGA+TGG + chr1_1:49553064-49553083 Msa0025950:intron 35.0%
GAATTCCAAGGACATTAACT+TGG + chr1_1:49553170-49553189 Msa0025950:intron 35.0%
AGATTCCAAGTTAATGTCCT+TGG - chr1_1:49551355-49551374 None:intergenic 35.0%
! ATCTTTTGCACAAAAGAACC+TGG + chr1_1:49553194-49553213 Msa0025950:intron 35.0%
! TGCCACATCCTTGTATTTTA+AGG + chr1_1:49553585-49553604 Msa0025950:intron 35.0%
CTCCTTAAAATACAAGGATG+TGG - chr1_1:49553590-49553609 None:intergenic 35.0%
ATGAAAGATTAGCATGACAC+AGG + chr1_1:49553664-49553683 Msa0025950:intron 35.0%
TGAAAGATTAGCATGACACA+GGG + chr1_1:49553665-49553684 Msa0025950:intron 35.0%
AAAACTGGAGAAAAACACAC+AGG - chr1_1:49553703-49553722 None:intergenic 35.0%
AACATTTCGTCCTTGATGTA+GGG + chr1_1:49553942-49553961 Msa0025950:intron 35.0%
TAAAAGGTGAATTGTGATGG+AGG - chr1_1:49553978-49553997 None:intergenic 35.0%
ATATGTGAGTATGAGTGAGA+TGG + chr1_1:49554300-49554319 Msa0025950:intron 35.0%
!! CTATATGCATAGAGTTTTGG+CGG + chr1_1:49554403-49554422 Msa0025950:intron 35.0%
GGGAATTCTGTCAAACTAAA+AGG - chr1_1:49554506-49554525 None:intergenic 35.0%
! TGAGAAAAAAGTGTGAAAGC+AGG + chr1_1:49554737-49554756 Msa0025950:intron 35.0%
! GAGAAAAAAGTGTGAAAGCA+GGG + chr1_1:49554738-49554757 Msa0025950:intron 35.0%
! AGAAAAAAGTGTGAAAGCAG+GGG + chr1_1:49554739-49554758 Msa0025950:intron 35.0%
ACGATAAGTATTCACTACCT+TGG + chr1_1:49554792-49554811 Msa0025950:intron 35.0%
GTACACTATTGTTGCTGAAA+TGG - chr1_1:49554902-49554921 None:intergenic 35.0%
TCTCATCTCATGTCATAATC+CGG + chr1_1:49554937-49554956 Msa0025950:intron 35.0%
TTATATTACCTTCTCAGACC+CGG - chr1_1:49554959-49554978 None:intergenic 35.0%
ATCTTTGGTATGTGAGGAAA+TGG - chr1_1:49555105-49555124 None:intergenic 35.0%
GATCAAATCTTTGGTATGTG+AGG - chr1_1:49555111-49555130 None:intergenic 35.0%
!!! GATGTCCTATTTTTACCCAT+TGG + chr1_1:49555222-49555241 Msa0025950:intron 35.0%
TCTAATAGTTGTAGAGTTGC+TGG - chr1_1:49555559-49555578 None:intergenic 35.0%
AGATACACTTCCTTGAATTG+TGG + chr1_1:49555949-49555968 Msa0025950:intron 35.0%
TAATCTCTGACAATTGCGTA+TGG - chr1_1:49556319-49556338 None:intergenic 35.0%
! GCCTTTTAAACAAGTGATCA+TGG - chr1_1:49556345-49556364 None:intergenic 35.0%
GGCTTATATCTCTTACAACT+TGG + chr1_1:49556362-49556381 Msa0025950:intron 35.0%
AAGAGATAACGAATTGAGCT+TGG - chr1_1:49556600-49556619 None:intergenic 35.0%
!! ATTATAAGGTGTTGCTTTGG+AGG - chr1_1:49556843-49556862 None:intergenic 35.0%
! CTGGTGCTAGGTTTATTATA+AGG - chr1_1:49556857-49556876 None:intergenic 35.0%
!! TTTGGATGTAATGGATGATG+GGG + chr1_1:49557143-49557162 Msa0025950:intron 35.0%
TTTCATTGCTAGTGAAAGTG+AGG + chr1_1:49548196-49548215 Msa0025950:five_prime_UTR 35.0%
GAATGAACACAATCCTTTGA+AGG + chr1_1:49548251-49548270 Msa0025950:five_prime_UTR 35.0%
CCATTTCACGGAATCTAATT+TGG - chr1_1:49548557-49548576 None:intergenic 35.0%
CCAAATTAGATTCCGTGAAA+TGG + chr1_1:49548554-49548573 Msa0025950:five_prime_UTR 35.0%
!! TTTTGAAGGTAGCCATTTCA+CGG - chr1_1:49548569-49548588 None:intergenic 35.0%
! TATCGAGTTTGAAGCACTAA+TGG + chr1_1:49548815-49548834 Msa0025950:intron 35.0%
GGCAATTGTAGAAACAGTTA+GGG - chr1_1:49548946-49548965 None:intergenic 35.0%
AGGCAATTGTAGAAACAGTT+AGG - chr1_1:49548947-49548966 None:intergenic 35.0%
CTACAATTGCCTTCTTTCAA+AGG + chr1_1:49548955-49548974 Msa0025950:intron 35.0%
!! CGGTTGATGGTAAGAAAAAT+AGG + chr1_1:49549181-49549200 Msa0025950:intron 35.0%
CCACTATCTCCTTTGTTAAT+AGG - chr1_1:49549221-49549240 None:intergenic 35.0%
CCTATTAACAAAGGAGATAG+TGG + chr1_1:49549218-49549237 Msa0025950:intron 35.0%
GCTATTGAAGTCCTGATTAT+TGG + chr1_1:49549372-49549391 Msa0025950:intron 35.0%
CAGCATGAGTTTATCAACTA+CGG + chr1_1:49549435-49549454 Msa0025950:intron 35.0%
AAAGAAGGATCTTCAAGACT+TGG + chr1_1:49549707-49549726 Msa0025950:intron 35.0%
! TATCGATTATATGGAGGACT+AGG - chr1_1:49549834-49549853 None:intergenic 35.0%
GGACAAGAGTAACATTAAGT+TGG - chr1_1:49549975-49549994 None:intergenic 35.0%
TCTCTCTCTAACTTTCTATC+AGG - chr1_1:49549996-49550015 None:intergenic 35.0%
ATAGAAAGTTAGAGAGAGAG+AGG + chr1_1:49549997-49550016 Msa0025950:intron 35.0%
TAGCCAAATCGAAATCTAGA+TGG - chr1_1:49559430-49559449 None:intergenic 35.0%
TCTTCGTCAACAACATCAAT+GGG + chr1_1:49559503-49559522 Msa0025950:intron 35.0%
ATCTATTTAACATGAGGTGG+TGG - chr1_1:49550403-49550422 None:intergenic 35.0%
GAGATCTATTTAACATGAGG+TGG - chr1_1:49550406-49550425 None:intergenic 35.0%
!! ATCAGCTTTTGAGAAGATGA+CGG - chr1_1:49559701-49559720 None:intergenic 35.0%
TAACATCTCAGACTACTTTC+AGG + chr1_1:49559776-49559795 Msa0025950:intron 35.0%
!! AAAGACTCATGTTGGTTTGT+GGG - chr1_1:49559815-49559834 None:intergenic 35.0%
!! AAAAGACTCATGTTGGTTTG+TGG - chr1_1:49559816-49559835 None:intergenic 35.0%
GAAGGAAGATATCTCAATGT+AGG + chr1_1:49560661-49560680 Msa0025950:intron 35.0%
ATATCTCAATGTAGGGAGTT+AGG + chr1_1:49560669-49560688 Msa0025950:intron 35.0%
!!! GGTTTTAGATGTTGGTTTAG+TGG + chr1_1:49550926-49550945 Msa0025950:intron 35.0%
CATGTGTTTGTGGGATTTAT+TGG + chr1_1:49560753-49560772 Msa0025950:intron 35.0%
ATTGCATGCATTCAGTTTCT+AGG - chr1_1:49551141-49551160 None:intergenic 35.0%
TTTGACATGTGTTTCGATAG+AGG + chr1_1:49551160-49551179 Msa0025950:intron 35.0%
ATGATCCATTAATCTCTCGT+CGG + chr1_1:49551210-49551229 Msa0025950:intron 35.0%
AGATTCCAAGTTAATGTCCT+TGG + chr1_1:49551355-49551374 Msa0025950:intron 35.0%
GAATTCCAAGGACATTAACT+TGG - chr1_1:49553170-49553189 None:intergenic 35.0%
TATGGTTCGTAAGAATTCCA+AGG - chr1_1:49561138-49561157 None:intergenic 35.0%
GTTTCCTCTATAGCAATAGA+TGG - chr1_1:49553064-49553083 None:intergenic 35.0%
! AGGAAACACCATTTGTTGAT+TGG + chr1_1:49561244-49561263 Msa0025950:CDS 35.0%
TGCAGACACTTAACTATAGA+TGG - chr1_1:49551528-49551547 None:intergenic 35.0%
AAGCACTTCACAATATGCAA+GGG - chr1_1:49552942-49552961 Msa0025960:five_prime_UTR 35.0%
! AAAGCACTTCACAATATGCA+AGG - chr1_1:49552941-49552960 Msa0025960:five_prime_UTR 35.0%
CATTATACTTAGGGTGATGT+AGG - chr1_1:49551640-49551659 None:intergenic 35.0%
CTACATCACCCTAAGTATAA+TGG + chr1_1:49551638-49551657 Msa0025950:intron 35.0%
! CACCCTAAGTATAATGGAAT+TGG + chr1_1:49561407-49561426 Msa0025950:intron 35.0%
ATTGGATAGAAATTCACCTC+TGG + chr1_1:49551662-49551681 Msa0025950:intron 35.0%
!! ACCACATACAAGAAGTACTT+TGG + chr1_1:49551706-49551725 Msa0025950:intron 35.0%
! TCCAAAGTACTTCTTGTATG+TGG - chr1_1:49552823-49552842 Msa0025960:CDS 35.0%
AAACATGTCTTCCCTTAAGT+AGG - chr1_1:49561659-49561678 None:intergenic 35.0%
TACCTTCAAAAGTTGCGCAA+AGG + chr1_1:49548578-49548597 Msa0025950:five_prime_UTR 40.0%
! GATCGCGACATAACTGTTTT+TGG + chr1_1:49548663-49548682 Msa0025950:CDS 40.0%
TCTCCTTTGTTAATAGGGGT+GGG - chr1_1:49549215-49549234 None:intergenic 40.0%
ATCTCCTTTGTTAATAGGGG+TGG - chr1_1:49549216-49549235 None:intergenic 40.0%
GCATGCCATTCCTATAATGA+TGG - chr1_1:49549354-49549373 None:intergenic 40.0%
!! CGTAGTTGATAAACTCATGC+TGG - chr1_1:49549437-49549456 None:intergenic 40.0%
AGGATCTTCAAGACTTGGAT+TGG + chr1_1:49549712-49549731 Msa0025950:intron 40.0%
! TCTTCAAGACTTGGATTGGA+AGG + chr1_1:49549716-49549735 Msa0025950:intron 40.0%
! TGGATTGGAAGGCATAGAAA+AGG + chr1_1:49549727-49549746 Msa0025950:intron 40.0%
TAAGGGAAAACCTAGAGAGA+AGG - chr1_1:49550028-49550047 None:intergenic 40.0%
AAGTGAACCTTCTGAGTAGA+GGG - chr1_1:49550131-49550150 None:intergenic 40.0%
TAGCCAAATCGAAATCTGGA+TGG - chr1_1:49550183-49550202 None:intergenic 40.0%
CCATTGATGTTGTTGACGAA+GGG - chr1_1:49550258-49550277 None:intergenic 40.0%
CCTTCGTCAACAACATCAAT+GGG + chr1_1:49550256-49550275 Msa0025950:intron 40.0%
!! AGCTTACCACTTTTGTTTGG+CGG - chr1_1:49550529-49550548 None:intergenic 40.0%
!! ATGGTTTTTCTCTACCGGTT+AGG + chr1_1:49550551-49550570 Msa0025950:intron 40.0%
AAAACAGAGAGAGTCCTAAC+CGG - chr1_1:49550568-49550587 None:intergenic 40.0%
TTGGAATGCCACTACAAAGA+TGG + chr1_1:49550657-49550676 Msa0025950:intron 40.0%
TGGAATGCCACTACAAAGAT+GGG + chr1_1:49550658-49550677 Msa0025950:intron 40.0%
CAAATGACCCATCTTTGTAG+TGG - chr1_1:49550668-49550687 None:intergenic 40.0%
CACTACAAAGATGGGTCATT+TGG + chr1_1:49550666-49550685 Msa0025950:intron 40.0%
AAGATTTGGCAAGGTCCTTA+TGG + chr1_1:49550695-49550714 Msa0025950:intron 40.0%
! TCTGCAACCTCTTCATGTTT+TGG + chr1_1:49550732-49550751 Msa0025950:intron 40.0%
AAGACAGCCAAAACATGAAG+AGG - chr1_1:49550742-49550761 None:intergenic 40.0%
AAGCACGTTTCGACTATAAG+TGG - chr1_1:49550798-49550817 None:intergenic 40.0%
TTCTCTTCTCTTCGTTGTCA+TGG + chr1_1:49550868-49550887 Msa0025950:intron 40.0%
GCTCCCATCTATTGATATAG+AGG + chr1_1:49551461-49551480 Msa0025950:intron 40.0%
TACTTAGGGTGATGTAGGTA+CGG - chr1_1:49551635-49551654 None:intergenic 40.0%
! AGAAATTCACCTCTGGAAGT+AGG + chr1_1:49551669-49551688 Msa0025950:intron 40.0%
! GAAATTCACCTCTGGAAGTA+GGG + chr1_1:49551670-49551689 Msa0025950:intron 40.0%
! AAATTCACCTCTGGAAGTAG+GGG + chr1_1:49551671-49551690 Msa0025950:intron 40.0%
! TGAATGCCATGTCTGAAACT+CGG - chr1_1:49551846-49551865 None:intergenic 40.0%
TGAGCATCAATGCCTACTTA+AGG + chr1_1:49551875-49551894 Msa0025950:intron 40.0%
TCACGGATATAAGCAAGTGA+AGG + chr1_1:49551929-49551948 Msa0025950:intron 40.0%
TATAAGCAAGTGAAGGACTG+AGG + chr1_1:49551936-49551955 Msa0025950:intron 40.0%
TCAAGTCTATGCATGATCGA+TGG - chr1_1:49552337-49552356 Msa0025960:CDS 40.0%
TTGAATCATTGGTCGCAGAA+CGG + chr1_1:49552245-49552264 Msa0025950:intron 40.0%
TCAAGTCTATGCATGATCGA+TGG + chr1_1:49552337-49552356 Msa0025950:intron 40.0%
TCAGGAGGTAACTCAAACAA+AGG + chr1_1:49552421-49552440 Msa0025950:intron 40.0%
AAACGTGTCTTGCCTTAAGT+AGG + chr1_1:49552636-49552655 Msa0025950:intron 40.0%
TGAGCATCAATGCCTACTTA+AGG - chr1_1:49551875-49551894 None:intergenic 40.0%
! TAATGTCTGAAACCCGGAAA+AGG + chr1_1:49552686-49552705 Msa0025950:intron 40.0%
ATTGGATAGAAATTCACCCC+TGG - chr1_1:49552870-49552889 Msa0025960:CDS 40.0%
AGGAAACACCATCTGTTGAT+TGG - chr1_1:49553051-49553070 None:intergenic 40.0%
CATTAATCTCTTGTCGGATC+AGG - chr1_1:49553319-49553338 None:intergenic 40.0%
CTGATCCGACAAGAGATTAA+TGG + chr1_1:49553317-49553336 Msa0025950:intron 40.0%
TTTGACATGTGTTTCGATGG+AGG - chr1_1:49553375-49553394 None:intergenic 40.0%
GATTCTACACCGTAGAAAAC+TGG - chr1_1:49553718-49553737 None:intergenic 40.0%
CAACATTTCGTCCTTGATGT+AGG + chr1_1:49553941-49553960 Msa0025950:intron 40.0%
CTCATCTCATGTCATAATCC+GGG + chr1_1:49554938-49554957 Msa0025950:intron 40.0%
CTCAAAACTGATACGTACAC+AGG - chr1_1:49555063-49555082 None:intergenic 40.0%
CACAAATTGTTTAGCGTGTG+TGG + chr1_1:49555806-49555825 Msa0025950:intron 40.0%
GCACTATTTGCCACAATTCA+AGG - chr1_1:49555962-49555981 None:intergenic 40.0%
TCTTCGTTGCAAAGTTTGTG+AGG + chr1_1:49556252-49556271 Msa0025950:intron 40.0%
GTTAAGTGGTAGAGCATATG+TGG - chr1_1:49556409-49556428 None:intergenic 40.0%
TAGTGGAAGTGAGGATTCAT+AGG - chr1_1:49556799-49556818 None:intergenic 40.0%
TTTCATTGCTAGTGGAAGTG+AGG - chr1_1:49556808-49556827 None:intergenic 40.0%
TTGGCAAGTACAAAGGTCAT+AGG - chr1_1:49556880-49556899 None:intergenic 40.0%
AAGTTCGTTGGCAAGTACAA+AGG - chr1_1:49556887-49556906 None:intergenic 40.0%
TTGTACTTGCCAACGAACTT+AGG + chr1_1:49556887-49556906 Msa0025950:intron 40.0%
! CTTCCCCATCAGTTGTTATT+TGG + chr1_1:49557086-49557105 Msa0025950:intron 40.0%
TAATAAAGCTAGCAGGCCTA+TGG - chr1_1:49557368-49557387 None:intergenic 40.0%
TACCTTCAAAAGTTGCGCAA+AGG + chr1_1:49548578-49548597 Msa0025950:five_prime_UTR 40.0%
! GATCGCGACATAACTGTTTT+TGG + chr1_1:49548663-49548682 Msa0025950:CDS 40.0%
TCTCCTTTGTTAATAGGGGT+GGG - chr1_1:49549215-49549234 None:intergenic 40.0%
ATCTCCTTTGTTAATAGGGG+TGG - chr1_1:49549216-49549235 None:intergenic 40.0%
GCATGCCATTCCTATAATGA+TGG - chr1_1:49549354-49549373 None:intergenic 40.0%
!! CGTAGTTGATAAACTCATGC+TGG - chr1_1:49549437-49549456 None:intergenic 40.0%
AGGATCTTCAAGACTTGGAT+TGG + chr1_1:49549712-49549731 Msa0025950:intron 40.0%
! TCTTCAAGACTTGGATTGGA+AGG + chr1_1:49549716-49549735 Msa0025950:intron 40.0%
! TGGATTGGAAGGCATAGAAA+AGG + chr1_1:49549727-49549746 Msa0025950:intron 40.0%
TAAGGGAAAACCTAGAGAGA+AGG - chr1_1:49550028-49550047 None:intergenic 40.0%
AAGTGAACCTTCTGAGTAGA+GGG - chr1_1:49550131-49550150 None:intergenic 40.0%
! ATCGAAATCTAGATGGTGGT+GGG - chr1_1:49559423-49559442 None:intergenic 40.0%
! AATCGAAATCTAGATGGTGG+TGG - chr1_1:49559424-49559443 None:intergenic 40.0%
CCAAATCGAAATCTAGATGG+TGG - chr1_1:49559427-49559446 None:intergenic 40.0%
CCACCATCTAGATTTCGATT+TGG + chr1_1:49559424-49559443 Msa0025950:intron 40.0%
ATGTTGTTGACGAAGAGATC+TGG - chr1_1:49559499-49559518 None:intergenic 40.0%
CTCTTCGTCAACAACATCAA+TGG + chr1_1:49559502-49559521 Msa0025950:intron 40.0%
!! AAGACTCATGTTGGTTTGTG+GGG - chr1_1:49559814-49559833 None:intergenic 40.0%
! AGCATGCGAGTGAGAATTTT+GGG - chr1_1:49559897-49559916 None:intergenic 40.0%
! AAGCATGCGAGTGAGAATTT+TGG - chr1_1:49559898-49559917 None:intergenic 40.0%
!!! ACTTGGAGCAATTTTGGGAT+GGG - chr1_1:49559945-49559964 None:intergenic 40.0%
!!! GCTTGACTTGGAGCAATTTT+GGG - chr1_1:49559950-49559969 None:intergenic 40.0%
!!! TGCTTGACTTGGAGCAATTT+TGG - chr1_1:49559951-49559970 None:intergenic 40.0%
GCTTAACTGTGGAGTTCTTA+TGG + chr1_1:49559972-49559991 Msa0025950:intron 40.0%
!! AAAGTCTCGTGTTGGTTTGT+GGG - chr1_1:49560325-49560344 None:intergenic 40.0%
!! AAAAGTCTCGTGTTGGTTTG+TGG - chr1_1:49560326-49560345 None:intergenic 40.0%
!!! ACTTGGAGCAATTTTGGGAT+GGG - chr1_1:49559945-49559964 None:intergenic 40.0%
!!! GCTTGACTTGGAGCAATTTT+GGG - chr1_1:49559950-49559969 None:intergenic 40.0%
!!! TGCTTGACTTGGAGCAATTT+TGG - chr1_1:49559951-49559970 None:intergenic 40.0%
GCTTAACTGTGGAGTTCTTA+TGG + chr1_1:49559972-49559991 Msa0025950:intron 40.0%
CATCTCATTCCGATGTGATT+CGG + chr1_1:49560560-49560579 Msa0025950:intron 40.0%
!!! GGGAGTTAGGTTTTAGATGT+TGG + chr1_1:49560682-49560701 Msa0025950:intron 40.0%
TTCCGTTGATCATGTGTTTG+TGG + chr1_1:49560743-49560762 Msa0025950:intron 40.0%
TCCGTTGATCATGTGTTTGT+GGG + chr1_1:49560744-49560763 Msa0025950:intron 40.0%
TCCCACAAACACATGATCAA+CGG - chr1_1:49550984-49551003 None:intergenic 40.0%
ATGTAGGTACGACCAATATG+AGG - chr1_1:49561387-49561406 None:intergenic 40.0%
! AGAAATTCACCTCTGGAAGT+AGG + chr1_1:49551669-49551688 Msa0025950:intron 40.0%
! GAAATTCACCTCTGGAAGTA+GGG + chr1_1:49551670-49551689 Msa0025950:intron 40.0%
! AAATTCACCTCTGGAAGTAG+GGG + chr1_1:49551671-49551690 Msa0025950:intron 40.0%
! TGAATGCCATGTCTGAAACT+CGG - chr1_1:49551846-49551865 None:intergenic 40.0%
TGAGCATCAATGCCTACTTA+AGG + chr1_1:49551875-49551894 Msa0025950:intron 40.0%
GAGCATCAATGCCTACTTAA+GGG + chr1_1:49551876-49551895 Msa0025950:intron 40.0%
TCACGGATATAAGCAAGTGA+AGG + chr1_1:49551929-49551948 Msa0025950:intron 40.0%
AAGCTCGTTGGCAAGTACAA+TGG + chr1_1:49548119-49548138 Msa0025950:five_prime_UTR 45.0%
TTGGCAAGTACAATGGCCAT+AGG + chr1_1:49548126-49548145 Msa0025950:five_prime_UTR 45.0%
! CTCCTTTGCGCAACTTTTGA+AGG - chr1_1:49548583-49548602 None:intergenic 45.0%
CTTCAAAAGTTGCGCAAAGG+AGG + chr1_1:49548581-49548600 Msa0025950:five_prime_UTR 45.0%
TTCCTCGCTCATGCAAGAAA+CGG + chr1_1:49549161-49549180 Msa0025950:CDS 45.0%
CTCATGCAAGAAACGGTTGA+TGG + chr1_1:49549168-49549187 Msa0025950:CDS 45.0%
GTTCCCACCCCTATTAACAA+AGG + chr1_1:49549209-49549228 Msa0025950:intron 45.0%
TCTAGGTAGTCTCCCTGTAT+TGG + chr1_1:49549684-49549703 Msa0025950:intron 45.0%
GTCTCCCTGTATTGGAAAGA+AGG + chr1_1:49549692-49549711 Msa0025950:intron 45.0%
AGGTCTCCAATGATATGGAG+GGG - chr1_1:49550063-49550082 None:intergenic 45.0%
GAGGTCTCCAATGATATGGA+GGG - chr1_1:49550064-49550083 None:intergenic 45.0%
AGTGAACCTTCTGAGTAGAG+GGG - chr1_1:49550130-49550149 None:intergenic 45.0%
GAAGTGAACCTTCTGAGTAG+AGG - chr1_1:49550132-49550151 None:intergenic 45.0%
! ATCGAAATCTGGATGGTGGT+GGG - chr1_1:49550176-49550195 None:intergenic 45.0%
! AATCGAAATCTGGATGGTGG+TGG - chr1_1:49550177-49550196 None:intergenic 45.0%
CCAAATCGAAATCTGGATGG+TGG - chr1_1:49550180-49550199 None:intergenic 45.0%
CCACCATCCAGATTTCGATT+TGG + chr1_1:49550177-49550196 Msa0025950:intron 45.0%
GTGGTAGCCAAATCGAAATC+TGG - chr1_1:49550187-49550206 None:intergenic 45.0%
ATGTTGTTGACGAAGGGATC+TGG - chr1_1:49550252-49550271 None:intergenic 45.0%
CCCTTCGTCAACAACATCAA+TGG + chr1_1:49550255-49550274 Msa0025950:intron 45.0%
CCCATTGATGTTGTTGACGA+AGG - chr1_1:49550259-49550278 None:intergenic 45.0%
TCGTCAACAACATCAATGGG+AGG + chr1_1:49550259-49550278 Msa0025950:intron 45.0%
GGATCGGTACCTTAGAGTAA+TGG - chr1_1:49550336-49550355 None:intergenic 45.0%
GATCTCTTGCTTTGGTACCA+TGG + chr1_1:49550420-49550439 Msa0025950:intron 45.0%
! AGATGATGGTAGCAGATCCA+TGG - chr1_1:49550440-49550459 None:intergenic 45.0%
CTGATCCGACGAGAGATTAA+TGG - chr1_1:49551218-49551237 None:intergenic 45.0%
CATTAATCTCTCGTCGGATC+AGG + chr1_1:49551216-49551235 Msa0025950:intron 45.0%
ATGTAGGTACGGCCAATATG+AGG - chr1_1:49551624-49551643 None:intergenic 45.0%
! CCATGTCTGAAACTCGGAAA+AGG - chr1_1:49551840-49551859 None:intergenic 45.0%
! CCTTTTCCGAGTTTCAGACA+TGG + chr1_1:49551837-49551856 Msa0025950:intron 45.0%
TTCACCATCCTCTACTTCCA+GGG + chr1_1:49552850-49552869 Msa0025950:intron 45.0%
AAATTCACCCCTGGAAGTAG+AGG - chr1_1:49552861-49552880 Msa0025960:CDS 45.0%
ATGTAGGTACGACCATTACG+AGG + chr1_1:49552908-49552927 Msa0025950:intron 45.0%
GCTGCCATCTATTGCTATAG+AGG - chr1_1:49561224-49561243 None:intergenic 45.0%
GATTAGCATGACACAGGGAA+TGG + chr1_1:49553670-49553689 Msa0025950:intron 45.0%
CTGGAGAAAAACACACAGGA+GGG - chr1_1:49553699-49553718 None:intergenic 45.0%
ACTGGAGAAAAACACACAGG+AGG - chr1_1:49553700-49553719 None:intergenic 45.0%
! TGGCGGCCAAATACCATTTT+TGG + chr1_1:49554420-49554439 Msa0025950:intron 45.0%
AACTGATACGTACACAGGCA+TGG - chr1_1:49555058-49555077 None:intergenic 45.0%
ATTGTTTAGCGTGTGTGGTC+TGG + chr1_1:49555811-49555830 Msa0025950:intron 45.0%
TTGTTTAGCGTGTGTGGTCT+GGG + chr1_1:49555812-49555831 Msa0025950:intron 45.0%
TCTGGGTCGGTATTCACAAT+AGG + chr1_1:49555829-49555848 Msa0025950:intron 45.0%
! CAAAGTTTGTGAGGCACTCA+AGG + chr1_1:49556261-49556280 Msa0025950:intron 45.0%
GAATGTACGCAATCCGTTGA+AGG - chr1_1:49556753-49556772 None:intergenic 45.0%
GAAGTGAGGATTCATAGGCA+TGG - chr1_1:49556794-49556813 None:intergenic 45.0%
GAGCAAGCTTTCATTGCTAG+TGG - chr1_1:49548188-49548207 None:intergenic 45.0%
CAAGTACAAAGGTCATAGGC+TGG - chr1_1:49556876-49556895 None:intergenic 45.0%
GATGGGGAAGAGATTCTAAC+TGG + chr1_1:49557159-49557178 Msa0025950:intron 45.0%
TTGTACTTGCCAACGAGCTT+AGG - chr1_1:49548119-49548138 None:intergenic 45.0%
AAGCTCGTTGGCAAGTACAA+TGG + chr1_1:49548119-49548138 Msa0025950:five_prime_UTR 45.0%
TTGGCAAGTACAATGGCCAT+AGG + chr1_1:49548126-49548145 Msa0025950:five_prime_UTR 45.0%
! CTCCTTTGCGCAACTTTTGA+AGG - chr1_1:49548583-49548602 None:intergenic 45.0%
CTTCAAAAGTTGCGCAAAGG+AGG + chr1_1:49548581-49548600 Msa0025950:five_prime_UTR 45.0%
TTCCTCGCTCATGCAAGAAA+CGG + chr1_1:49549161-49549180 Msa0025950:CDS 45.0%
CTCATGCAAGAAACGGTTGA+TGG + chr1_1:49549168-49549187 Msa0025950:CDS 45.0%
GTTCCCACCCCTATTAACAA+AGG + chr1_1:49549209-49549228 Msa0025950:intron 45.0%
AGGGGTGGAACATAAGCTAA+GGG - chr1_1:49559292-49559311 None:intergenic 45.0%
AGTGAACCTTCTGAGTAGAG+GGG - chr1_1:49550130-49550149 None:intergenic 45.0%
GAAGTGAACCTTCTGAGTAG+AGG - chr1_1:49550132-49550151 None:intergenic 45.0%
!! TCTAGATGGTGGTGGGAATA+AGG - chr1_1:49559416-49559435 None:intergenic 45.0%
!! TATGGGTTGGTTGTAGCAAG+AGG - chr1_1:49559472-49559491 None:intergenic 45.0%
! CGAAGAGATCTGGTGGATAT+GGG - chr1_1:49559489-49559508 None:intergenic 45.0%
! ACGAAGAGATCTGGTGGATA+TGG - chr1_1:49559490-49559509 None:intergenic 45.0%
TTGTTGACGAAGAGATCTGG+TGG - chr1_1:49559496-49559515 None:intergenic 45.0%
TCGTCAACAACATCAATGGG+AGG + chr1_1:49550259-49550278 Msa0025950:intron 45.0%
GATCTCTTGCTTTGGTACCA+TGG + chr1_1:49550420-49550439 Msa0025950:intron 45.0%
! AGATGACGGTAGAAGATCCA+TGG - chr1_1:49559687-49559706 None:intergenic 45.0%
! TCTGAGATGTTACAGCTTCC+GGG - chr1_1:49559768-49559787 None:intergenic 45.0%
! GTCTGAGATGTTACAGCTTC+CGG - chr1_1:49559769-49559788 None:intergenic 45.0%
CACGCTGAAAAGACTCATGT+TGG - chr1_1:49559823-49559842 None:intergenic 45.0%
ATGCTTACCGGGAAACTTCT+TGG + chr1_1:49559859-49559878 Msa0025950:intron 45.0%
TTACCGGGAAACTTCTTGGT+AGG + chr1_1:49559863-49559882 Msa0025950:intron 45.0%
TGACCTACCAAGAAGTTTCC+CGG - chr1_1:49559869-49559888 None:intergenic 45.0%
!!! GCGAGTGAGAATTTTGGGAT+GGG - chr1_1:49559892-49559911 None:intergenic 45.0%
!! TGCGAGTGAGAATTTTGGGA+TGG - chr1_1:49559893-49559912 None:intergenic 45.0%
ATTCTCACTCGCATGCTTAC+CGG + chr1_1:49559900-49559919 Msa0025950:intron 45.0%
!! GACTTGGAGCAATTTTGGGA+TGG - chr1_1:49559946-49559965 None:intergenic 45.0%
ACAGTTAAGCGTGCTTGACT+TGG - chr1_1:49559962-49559981 None:intergenic 45.0%
AAGTCAAGCACGCTTAACTG+TGG + chr1_1:49559961-49559980 Msa0025950:intron 45.0%
GTATGGGACTACATGGTTGA+GGG - chr1_1:49560065-49560084 None:intergenic 45.0%
CATGTAGTCCCATACCTACA+CGG + chr1_1:49560070-49560089 Msa0025950:intron 45.0%
CGAATCACATCGGAATGAGA+GGG - chr1_1:49560105-49560124 None:intergenic 45.0%
CCTCTCATTCCGATGTGATT+CGG + chr1_1:49560103-49560122 Msa0025950:intron 45.0%
CTAGAGGAACCGAATCACAT+CGG - chr1_1:49560115-49560134 None:intergenic 45.0%
! TCGGTTCCTCTAGAAACTGT+CGG + chr1_1:49560122-49560141 Msa0025950:intron 45.0%
! GCTGTCTGGGATGTTACAAA+TGG - chr1_1:49560282-49560301 None:intergenic 45.0%
GGCAATCATGAAAGCTGTCT+GGG - chr1_1:49560295-49560314 None:intergenic 45.0%
!! AAGTCTCGTGTTGGTTTGTG+GGG - chr1_1:49560324-49560343 None:intergenic 45.0%
CAAGCTGAAAAGTCTCGTGT+TGG - chr1_1:49560333-49560352 None:intergenic 45.0%
!! GACTTGGAGCAATTTTGGGA+TGG - chr1_1:49559946-49559965 None:intergenic 45.0%
ACAGTTAAGCGTGCTTGACT+TGG - chr1_1:49559962-49559981 None:intergenic 45.0%
AAGTCAAGCACGCTTAACTG+TGG + chr1_1:49559961-49559980 Msa0025950:intron 45.0%
TCGGAATGAGATGGATCCTA+AGG - chr1_1:49560553-49560572 None:intergenic 45.0%
CGAATCACATCGGAATGAGA+TGG - chr1_1:49560105-49560124 None:intergenic 45.0%
CTAGAGGAACCGAATCACAT+CGG - chr1_1:49560115-49560134 None:intergenic 45.0%
TAGAAACTGTCGTGCCTACA+CGG + chr1_1:49560589-49560608 Msa0025950:intron 45.0%
CTTCCTTCTACGACAATGAG+CGG - chr1_1:49560649-49560668 None:intergenic 45.0%
CTGATCCGACGAGAGATTAA+TGG - chr1_1:49551218-49551237 None:intergenic 45.0%
CATTAATCTCTCGTCGGATC+AGG + chr1_1:49551216-49551235 Msa0025950:intron 45.0%
GCTGCCATCTATTGCTATAG+AGG + chr1_1:49561224-49561243 Msa0025950:CDS 45.0%
! CCATGTCTGAAACTCGGAAA+AGG - chr1_1:49551840-49551859 None:intergenic 45.0%
! CCTTTTCCGAGTTTCAGACA+TGG + chr1_1:49551837-49551856 Msa0025950:intron 45.0%
!!! TTTGAAAAATAAAATTATTT+TGG + chr1_1:49548288-49548307 Msa0025950:five_prime_UTR 5.0%
!! TATCTAAAAATATAAAAAAT+AGG + chr1_1:49549283-49549302 Msa0025950:intron 5.0%
!!! TTATTTTATTTTTTATATCA+GGG - chr1_1:49549399-49549418 None:intergenic 5.0%
!!! TTTATTTTATTTTTTATATC+AGG - chr1_1:49549400-49549419 None:intergenic 5.0%
!!! AAATGATAATTTTATTTTAT+TGG - chr1_1:49555423-49555442 None:intergenic 5.0%
!! TTAATAAAAAAAATCATAAA+AGG - chr1_1:49555702-49555721 None:intergenic 5.0%
!!! TTTGAAAAATAAAATTATTT+TGG + chr1_1:49548288-49548307 Msa0025950:five_prime_UTR 5.0%
!! TATCTAAAAATATAAAAAAT+AGG + chr1_1:49549283-49549302 Msa0025950:intron 5.0%
AAGTTGCGCAAAGGAGGTGA+CGG + chr1_1:49548587-49548606 Msa0025950:five_prime_UTR 50.0%
AACCGTTTCTTGCATGAGCG+AGG - chr1_1:49549166-49549185 None:intergenic 50.0%
AGGGGCGGAACATAAGCTAA+GGG - chr1_1:49550045-49550064 None:intergenic 50.0%
TCTCCAATGATATGGAGGGG+CGG - chr1_1:49550060-49550079 None:intergenic 50.0%
GGAGGTCTCCAATGATATGG+AGG - chr1_1:49550065-49550084 None:intergenic 50.0%
AGAGGGGAAAACCTCCATTG+CGG - chr1_1:49550093-49550112 None:intergenic 50.0%
! GGTTTTCCCCTCTGCAATAG+AGG + chr1_1:49550100-49550119 Msa0025950:intron 50.0%
GTGAACCTTCTGAGTAGAGG+GGG - chr1_1:49550129-49550148 None:intergenic 50.0%
!! TCTGGATGGTGGTGGGAATA+GGG - chr1_1:49550169-49550188 None:intergenic 50.0%
!! ATCTGGATGGTGGTGGGAAT+AGG - chr1_1:49550170-49550189 None:intergenic 50.0%
TGTAGCAAGAGGAGTGATGG+TGG - chr1_1:49550214-49550233 None:intergenic 50.0%
!! TATGGGTTGGCTGTAGCAAG+AGG - chr1_1:49550225-49550244 None:intergenic 50.0%
! CGAAGGGATCTGGTGGATAT+GGG - chr1_1:49550242-49550261 None:intergenic 50.0%
! ACGAAGGGATCTGGTGGATA+TGG - chr1_1:49550243-49550262 None:intergenic 50.0%
TTGTTGACGAAGGGATCTGG+TGG - chr1_1:49550249-49550268 None:intergenic 50.0%
ACAATCGGTCGAGACAGAGA+GGG - chr1_1:49550368-49550387 None:intergenic 50.0%
!! CAAGGATGAGCATCGACGAT+GGG - chr1_1:49550489-49550508 None:intergenic 50.0%
!! ACAAGGATGAGCATCGACGA+TGG - chr1_1:49550490-49550509 None:intergenic 50.0%
CGTCGATGCTCATCCTTGTA+CGG + chr1_1:49550491-49550510 Msa0025950:intron 50.0%
!! CTTTTGTTTGGCGGTTCCCA+GGG - chr1_1:49550520-49550539 None:intergenic 50.0%
!! ACTTTTGTTTGGCGGTTCCC+AGG - chr1_1:49550521-49550540 None:intergenic 50.0%
TGGGAACCGCCAAACAAAAG+TGG + chr1_1:49550520-49550539 Msa0025950:intron 50.0%
CTCTTCGTTGTCATGGATCG+TGG + chr1_1:49550875-49550894 Msa0025950:intron 50.0%
TCGTTGTCATGGATCGTGGA+AGG + chr1_1:49550879-49550898 Msa0025950:intron 50.0%
CTTCACCATCCTCTACTTCC+AGG + chr1_1:49552849-49552868 Msa0025950:intron 50.0%
TCACCATCCTCTACTTCCAG+GGG + chr1_1:49552851-49552870 Msa0025950:intron 50.0%
GGTCGTACCTACATCACCAT+TGG - chr1_1:49552902-49552921 Msa0025960:five_prime_UTR 50.0%
GATGTAATGCTCCACTCGTG+CGG + chr1_1:49553865-49553884 Msa0025950:intron 50.0%
CTAGTAGCTGCCCTACATCA+AGG - chr1_1:49553955-49553974 None:intergenic 50.0%
GTCATAATCCGGGTCTGAGA+AGG + chr1_1:49554948-49554967 Msa0025950:intron 50.0%
CACCATCGCTTTAGCAATCG+CGG + chr1_1:49556228-49556247 Msa0025950:intron 50.0%
ATCCGCGATTGCTAAAGCGA+TGG - chr1_1:49556233-49556252 None:intergenic 50.0%
AAAGGTCATAGGCTGGTGCT+AGG - chr1_1:49556869-49556888 None:intergenic 50.0%
GAAGGCGATCCTAAGTTCGT+TGG - chr1_1:49556899-49556918 None:intergenic 50.0%
AAGTTGCGCAAAGGAGGTGA+CGG + chr1_1:49548587-49548606 Msa0025950:five_prime_UTR 50.0%
AACCGTTTCTTGCATGAGCG+AGG - chr1_1:49549166-49549185 None:intergenic 50.0%
GAGGGGTGGAACATAAGCTA+AGG - chr1_1:49559293-49559312 None:intergenic 50.0%
GTTCCACCCCTCCATATCAT+CGG + chr1_1:49559301-49559320 Msa0025950:intron 50.0%
AGGTCTCCGATGATATGGAG+GGG - chr1_1:49559310-49559329 None:intergenic 50.0%
GAGGTCTCCGATGATATGGA+GGG - chr1_1:49559311-49559330 None:intergenic 50.0%
AAAACCTCCATTGCGTAGGG+GGG - chr1_1:49559333-49559352 None:intergenic 50.0%
GAAAACCTCCATTGCGTAGG+GGG - chr1_1:49559334-49559353 None:intergenic 50.0%
GGAAAACCTCCATTGCGTAG+GGG - chr1_1:49559335-49559354 None:intergenic 50.0%
GGGAAAACCTCCATTGCGTA+GGG - chr1_1:49559336-49559355 None:intergenic 50.0%
! GGTTTTCCCCTCTGCAATAG+AGG + chr1_1:49550100-49550119 Msa0025950:intron 50.0%
GTGAACCTTCTGAGTAGAGG+GGG - chr1_1:49550129-49550148 None:intergenic 50.0%
TGTAGCAAGAGGAGTGATGG+TGG - chr1_1:49550214-49550233 None:intergenic 50.0%
GGTTGTAGCAAGAGGAGTGA+TGG - chr1_1:49559464-49559483 None:intergenic 50.0%
! GAGATCTGGTGGATATGGGT+TGG - chr1_1:49559485-49559504 None:intergenic 50.0%
GAGGCTCTCTTTGTTGCTCT+CGG + chr1_1:49559525-49559544 Msa0025950:intron 50.0%
ACAATCGGTCGAGACAGAGA+GGG - chr1_1:49550368-49550387 None:intergenic 50.0%
! TTAACATGAGGTGGTGGCTC+CGG - chr1_1:49559644-49559663 None:intergenic 50.0%
!! CAAGGATGAGCATCGACGAT+GGG - chr1_1:49550489-49550508 None:intergenic 50.0%
!! ACAAGGATGAGCATCGACGA+TGG - chr1_1:49550490-49550509 None:intergenic 50.0%
CGTCGATGCTCATCCTTGTA+TGG + chr1_1:49550491-49550510 Msa0025950:intron 50.0%
CTGAGATGTTACAGCTTCCG+GGG - chr1_1:49559767-49559786 None:intergenic 50.0%
!! TGTTGGTTTGTGGGGTCAGT+CGG - chr1_1:49559806-49559825 None:intergenic 50.0%
TTCTCACTCGCATGCTTACC+GGG + chr1_1:49559901-49559920 Msa0025950:intron 50.0%
ATGCTTACCGGGAAACTTCC+CGG + chr1_1:49559912-49559931 Msa0025950:intron 50.0%
!!! TTTTGGGATGGGTGACCAAC+CGG - chr1_1:49559934-49559953 None:intergenic 50.0%
GGTATGGGACTACATGGTTG+AGG - chr1_1:49560066-49560085 None:intergenic 50.0%
CGTGTAGGTATGGGACTACA+TGG - chr1_1:49560072-49560091 None:intergenic 50.0%
TCCTAAGGCCGTGTAGGTAT+GGG - chr1_1:49560081-49560100 None:intergenic 50.0%
ATCCTAAGGCCGTGTAGGTA+TGG - chr1_1:49560082-49560101 None:intergenic 50.0%
TCGGAATGAGAGGGATCCTA+AGG - chr1_1:49560096-49560115 None:intergenic 50.0%
CCGAATCACATCGGAATGAG+AGG - chr1_1:49560106-49560125 None:intergenic 50.0%
! CGGTTCCTCTAGAAACTGTC+GGG + chr1_1:49560123-49560142 Msa0025950:intron 50.0%
TGTAACACCAACAGCTGACG+AGG - chr1_1:49560194-49560213 None:intergenic 50.0%
CGGCAATCATGAAAGCTGTC+TGG - chr1_1:49560296-49560315 None:intergenic 50.0%
!! TGTTGGTTTGTGGGGTCAGT+CGG - chr1_1:49559806-49559825 None:intergenic 50.0%
ATGCTTACCGGGAAACTTCC+CGG + chr1_1:49559912-49559931 Msa0025950:intron 50.0%
!!! TTTTGGGATGGGTGACCTAC+CGG - chr1_1:49559881-49559900 None:intergenic 50.0%
GGGACTACATGGTTGAAGGA+AGG - chr1_1:49560518-49560537 None:intergenic 50.0%
GCATGGGACTACATGGTTGA+AGG - chr1_1:49560522-49560541 None:intergenic 50.0%
CATGTAGTCCCATGCCTACA+CGG + chr1_1:49560527-49560546 Msa0025950:intron 50.0%
! GTAGGCACGACAGTTTCTAG+AGG - chr1_1:49560588-49560607 None:intergenic 50.0%
CACTATTCCCCTACTTCCAG+AGG - chr1_1:49561444-49561463 None:intergenic 50.0%
AGTTGCGCAAAGGAGGTGAC+GGG + chr1_1:49548588-49548607 Msa0025950:five_prime_UTR 55.0%
GCTGCTGCAGAGATTGGAGA+TGG + chr1_1:49548641-49548660 Msa0025950:CDS 55.0%
AGAGGCTCTGCCTTCTCTCT+AGG + chr1_1:49550015-49550034 Msa0025950:intron 55.0%
GAGGGGCGGAACATAAGCTA+AGG - chr1_1:49550046-49550065 None:intergenic 55.0%
GTTCCGCCCCTCCATATCAT+TGG + chr1_1:49550054-49550073 Msa0025950:intron 55.0%
GGGGGAGGTCTCCAATGATA+TGG - chr1_1:49550068-49550087 None:intergenic 55.0%
AAAACCTCCATTGCGGAGGG+GGG - chr1_1:49550086-49550105 None:intergenic 55.0%
GAAAACCTCCATTGCGGAGG+GGG - chr1_1:49550087-49550106 None:intergenic 55.0%
GGAAAACCTCCATTGCGGAG+GGG - chr1_1:49550088-49550107 None:intergenic 55.0%
GGGAAAACCTCCATTGCGGA+GGG - chr1_1:49550089-49550108 None:intergenic 55.0%
GGGAAGCCTCTATTGCAGAG+GGG - chr1_1:49550109-49550128 None:intergenic 55.0%
GGGGAAGCCTCTATTGCAGA+GGG - chr1_1:49550110-49550129 None:intergenic 55.0%
!! GAGGAGTGATGGTGGTGATG+TGG - chr1_1:49550206-49550225 None:intergenic 55.0%
GGCTGTAGCAAGAGGAGTGA+TGG - chr1_1:49550217-49550236 None:intergenic 55.0%
! GGGATCTGGTGGATATGGGT+TGG - chr1_1:49550238-49550257 None:intergenic 55.0%
GAGGCTCTCTCTGTTGCTCT+CGG + chr1_1:49550278-49550297 Msa0025950:intron 55.0%
GAGAGGGTGGCATTCTGGAT+CGG - chr1_1:49550352-49550371 None:intergenic 55.0%
AGACAGAGAGGGTGGCATTC+TGG - chr1_1:49550357-49550376 None:intergenic 55.0%
GACAATCGGTCGAGACAGAG+AGG - chr1_1:49550369-49550388 None:intergenic 55.0%
! TTAACATGAGGTGGCGGCTC+CGG - chr1_1:49550397-49550416 None:intergenic 55.0%
!! ATGAGCATCGACGATGGGTG+GGG - chr1_1:49550484-49550503 None:intergenic 55.0%
!! GATGAGCATCGACGATGGGT+GGG - chr1_1:49550485-49550504 None:intergenic 55.0%
! CACCTCTGGAAGTAGGGGAA+TGG + chr1_1:49551676-49551695 Msa0025950:intron 55.0%
CACCATTCCCCTACTTCCAG+AGG - chr1_1:49551681-49551700 None:intergenic 55.0%
TCACCCCTGGAAGTAGAGGA+TGG - chr1_1:49552857-49552876 Msa0025960:CDS 55.0%
ACTGAAGAAAGCCGCACGAG+TGG - chr1_1:49553879-49553898 None:intergenic 55.0%
TTAGCGTGTGTGGTCTGGGT+CGG + chr1_1:49555816-49555835 Msa0025950:intron 55.0%
GAAGGCGATCCTAAGCTCGT+TGG + chr1_1:49557330-49557349 Msa0025950:CDS 55.0%
AGTTGCGCAAAGGAGGTGAC+GGG + chr1_1:49548588-49548607 Msa0025950:five_prime_UTR 55.0%
GCTGCTGCAGAGATTGGAGA+TGG + chr1_1:49548641-49548660 Msa0025950:CDS 55.0%
AGAGGCTCTGCCTTCTCTCT+AGG + chr1_1:49550015-49550034 Msa0025950:intron 55.0%
TCTCCGATGATATGGAGGGG+TGG - chr1_1:49559307-49559326 None:intergenic 55.0%
GGAGGTCTCCGATGATATGG+AGG - chr1_1:49559312-49559331 None:intergenic 55.0%
GGGGAAAACCTCCATTGCGT+AGG - chr1_1:49559337-49559356 None:intergenic 55.0%
GGGAAGCCTCTATTGCAGAG+GGG - chr1_1:49550109-49550128 None:intergenic 55.0%
GGGGAAGCCTCTATTGCAGA+GGG - chr1_1:49550110-49550129 None:intergenic 55.0%
!! GAGGAGTGATGGTGGTGATG+TGG - chr1_1:49550206-49550225 None:intergenic 55.0%
GAGAGGGTGGCATTCTGGAT+CGG - chr1_1:49550352-49550371 None:intergenic 55.0%
AGACAGAGAGGGTGGCATTC+TGG - chr1_1:49550357-49550376 None:intergenic 55.0%
GACAATCGGTCGAGACAGAG+AGG - chr1_1:49550369-49550388 None:intergenic 55.0%
!! ATGAGCATCGACGATGGGTG+GGG - chr1_1:49550484-49550503 None:intergenic 55.0%
!! GATGAGCATCGACGATGGGT+GGG - chr1_1:49550485-49550504 None:intergenic 55.0%
TCATCCTTGTATGGCCTCCC+CGG + chr1_1:49559747-49559766 Msa0025950:intron 55.0%
AGATGTTACAGCTTCCGGGG+AGG - chr1_1:49559764-49559783 None:intergenic 55.0%
GTCCTCACTCGCATGCTTAC+CGG + chr1_1:49559847-49559866 Msa0025950:intron 55.0%
TCCTCACTCGCATGCTTACC+GGG + chr1_1:49559848-49559867 Msa0025950:intron 55.0%
TTACCGGGAAACTTCCCGGT+TGG + chr1_1:49559916-49559935 Msa0025950:intron 55.0%
TGACCAACCGGGAAGTTTCC+CGG - chr1_1:49559922-49559941 None:intergenic 55.0%
! TTTGGGATGGGTGACCAACC+GGG - chr1_1:49559933-49559952 None:intergenic 55.0%
GGGACTACATGGTTGAGGGA+AGG - chr1_1:49560061-49560080 None:intergenic 55.0%
TCCCATACCTACACGGCCTT+AGG + chr1_1:49560077-49560096 Msa0025950:intron 55.0%
GCACAAGGCACGACAATGAG+CGG - chr1_1:49560151-49560170 None:intergenic 55.0%
CATTGTCGTGCCTTGTGCAC+CGG + chr1_1:49560153-49560172 Msa0025950:intron 55.0%
CCAACAGCTGACGAGGACAA+GGG - chr1_1:49560187-49560206 None:intergenic 55.0%
ACCAACAGCTGACGAGGACA+AGG - chr1_1:49560188-49560207 None:intergenic 55.0%
TCTCCCAGTACGGTGTGGTT+CGG - chr1_1:49560245-49560264 None:intergenic 55.0%
AGAGCAGACCTCTCCCAGTA+CGG - chr1_1:49560255-49560274 None:intergenic 55.0%
GTCCTCACTCGCATGCTTAC+CGG + chr1_1:49559847-49559866 Msa0025950:intron 55.0%
TCCTCACTCGCATGCTTACC+GGG + chr1_1:49559848-49559867 Msa0025950:intron 55.0%
TTACCGGGAAACTTCCCGGT+AGG + chr1_1:49559916-49559935 Msa0025950:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - chr1_1:49560379-49560398 None:intergenic 55.0%
! TTTGGGATGGGTGACCTACC+GGG - chr1_1:49559880-49559899 None:intergenic 55.0%
CGTGTAGGCATGGGACTACA+TGG - chr1_1:49560529-49560548 None:intergenic 55.0%
TCCTAAGGCCGTGTAGGCAT+GGG - chr1_1:49560538-49560557 None:intergenic 55.0%
ATCCTAAGGCCGTGTAGGCA+TGG - chr1_1:49560539-49560558 None:intergenic 55.0%
GATGGATCCTAAGGCCGTGT+AGG - chr1_1:49560544-49560563 None:intergenic 55.0%
AAGGCACGACAATGAGCGGA+AGG - chr1_1:49560615-49560634 None:intergenic 55.0%
GCACAAGGCACGACAATGAG+CGG - chr1_1:49560151-49560170 None:intergenic 55.0%
ATGAGCGGTCGTGTAGCACA+AGG - chr1_1:49560634-49560653 None:intergenic 55.0%
CGACCGCTCATTGTCGTAGA+AGG + chr1_1:49560643-49560662 Msa0025950:intron 55.0%
GTTGCGCAAAGGAGGTGACG+GGG + chr1_1:49548589-49548608 Msa0025950:five_prime_UTR 60.0%
!! AGGTGACGGGGCTGCTAGAT+CGG + chr1_1:49548601-49548620 Msa0025950:five_prime_UTR 60.0%
GGGGCTGCTAGATCGGAGAT+GGG + chr1_1:49548608-49548627 Msa0025950:exon 60.0%
CTGCTAGATCGGAGATGGGC+CGG + chr1_1:49548612-49548631 Msa0025950:exon 60.0%
TGCTAGATCGGAGATGGGCC+GGG + chr1_1:49548613-49548632 Msa0025950:exon 60.0%
GACGGAGCTGCTGCAGAGAT+TGG + chr1_1:49548635-49548654 Msa0025950:CDS 60.0%
GGGGAAAACCTCCATTGCGG+AGG - chr1_1:49550090-49550109 None:intergenic 60.0%
GGGGGAAGCCTCTATTGCAG+AGG - chr1_1:49550111-49550130 None:intergenic 60.0%
GGCTTCCCCCTCTACTCAGA+AGG + chr1_1:49550121-49550140 Msa0025950:intron 60.0%
ATCGGTCGAGACAGAGAGGG+TGG - chr1_1:49550365-49550384 None:intergenic 60.0%
CTCGACCGATTGTCCTCCAC+CGG + chr1_1:49550375-49550394 Msa0025950:intron 60.0%
!! GGATGAGCATCGACGATGGG+TGG - chr1_1:49550486-49550505 None:intergenic 60.0%
TCATCCTTGTACGGCCTCCC+TGG + chr1_1:49550500-49550519 Msa0025950:intron 60.0%
CATCCTTGTACGGCCTCCCT+GGG + chr1_1:49550501-49550520 Msa0025950:intron 60.0%
TTGTTTGGCGGTTCCCAGGG+AGG - chr1_1:49550517-49550536 None:intergenic 60.0%
GTGTGAAAGCAGGGGCAGAC+AGG + chr1_1:49554747-49554766 Msa0025950:intron 60.0%
GTTGCGCAAAGGAGGTGACG+GGG + chr1_1:49548589-49548608 Msa0025950:five_prime_UTR 60.0%
!! AGGTGACGGGGCTGCTAGAT+CGG + chr1_1:49548601-49548620 Msa0025950:five_prime_UTR 60.0%
GGGGCTGCTAGATCGGAGAT+GGG + chr1_1:49548608-49548627 Msa0025950:exon 60.0%
CTGCTAGATCGGAGATGGGC+CGG + chr1_1:49548612-49548631 Msa0025950:exon 60.0%
TGCTAGATCGGAGATGGGCC+GGG + chr1_1:49548613-49548632 Msa0025950:exon 60.0%
GACGGAGCTGCTGCAGAGAT+TGG + chr1_1:49548635-49548654 Msa0025950:CDS 60.0%
GGGGGAGGTCTCCGATGATA+TGG - chr1_1:49559315-49559334 None:intergenic 60.0%
GGGGGAAGCCTCTATTGCAG+AGG - chr1_1:49550111-49550130 None:intergenic 60.0%
GGCTTCCCCCTCTACTCAGA+AGG + chr1_1:49550121-49550140 Msa0025950:intron 60.0%
ATCGGTCGAGACAGAGAGGG+TGG - chr1_1:49550365-49550384 None:intergenic 60.0%
CTCGACCGATTGTCCTCCAC+CGG + chr1_1:49550375-49550394 Msa0025950:intron 60.0%
TGGCTCCGGTGGAGGACAAT+CGG - chr1_1:49559630-49559649 None:intergenic 60.0%
!! GGATGAGCATCGACGATGGG+TGG - chr1_1:49550486-49550505 None:intergenic 60.0%
TCCCGGTAAGCATGCGAGTG+AGG - chr1_1:49559852-49559871 None:intergenic 60.0%
GAGGGATCCTAAGGCCGTGT+AGG - chr1_1:49560087-49560106 None:intergenic 60.0%
! CGGCTCCCGACAGTTTCTAG+AGG - chr1_1:49560131-49560150 None:intergenic 60.0%
GAGGACAAGGGAGTGGTAGC+CGG - chr1_1:49560175-49560194 None:intergenic 60.0%
AGCTGACGAGGACAAGGGAG+TGG - chr1_1:49560182-49560201 None:intergenic 60.0%
CCCTTGTCCTCGTCAGCTGT+TGG + chr1_1:49560184-49560203 Msa0025950:intron 60.0%
CGAACCAAGCGGAAGCTGGT+GGG - chr1_1:49560219-49560238 None:intergenic 60.0%
ACGAACCAAGCGGAAGCTGG+TGG - chr1_1:49560220-49560239 None:intergenic 60.0%
! TGGTTCGGGGACGAACCAAG+CGG - chr1_1:49560230-49560249 None:intergenic 60.0%
TCCCCGAACCACACCGTACT+GGG + chr1_1:49560239-49560258 Msa0025950:intron 60.0%
TCCCAGTACGGTGTGGTTCG+GGG - chr1_1:49560243-49560262 None:intergenic 60.0%
CTCCCAGTACGGTGTGGTTC+GGG - chr1_1:49560244-49560263 None:intergenic 60.0%
GAACCACACCGTACTGGGAG+AGG + chr1_1:49560244-49560263 Msa0025950:intron 60.0%
AGACCTCTCCCAGTACGGTG+TGG - chr1_1:49560250-49560269 None:intergenic 60.0%
TCCCGGTAAGCATGCGAGTG+AGG - chr1_1:49559852-49559871 None:intergenic 60.0%
TCCCATGCCTACACGGCCTT+AGG + chr1_1:49560534-49560553 Msa0025950:intron 60.0%
CAATGAGCGGAAGGCCGTGT+AGG - chr1_1:49560606-49560625 None:intergenic 60.0%
CGGGGCTGCTAGATCGGAGA+TGG + chr1_1:49548607-49548626 Msa0025950:exon 65.0%
AGATCGGAGATGGGCCGGGA+CGG + chr1_1:49548617-49548636 Msa0025950:exon 65.0%
TCTCTGCAGCAGCTCCGTCC+CGG - chr1_1:49548634-49548653 None:intergenic 65.0%
CGGCTCCGGTGGAGGACAAT+CGG - chr1_1:49550383-49550402 None:intergenic 65.0%
GTTCCCAGGGAGGCCGTACA+AGG - chr1_1:49550507-49550526 None:intergenic 65.0%
CGGGGCTGCTAGATCGGAGA+TGG + chr1_1:49548607-49548626 Msa0025950:exon 65.0%
AGATCGGAGATGGGCCGGGA+CGG + chr1_1:49548617-49548636 Msa0025950:exon 65.0%
TCTCTGCAGCAGCTCCGTCC+CGG - chr1_1:49548634-49548653 None:intergenic 65.0%
GAGACCTCCCCCCTACGCAA+TGG + chr1_1:49559323-49559342 Msa0025950:intron 65.0%
ACCTCCCCCCTACGCAATGG+AGG + chr1_1:49559326-49559345 Msa0025950:intron 65.0%
ACCTCCATTGCGTAGGGGGG+AGG - chr1_1:49559330-49559349 None:intergenic 65.0%
! ACATGAGGTGGTGGCTCCGG+TGG - chr1_1:49559641-49559660 None:intergenic 65.0%
GCTTCCGGGGAGGCCATACA+AGG - chr1_1:49559754-49559773 None:intergenic 65.0%
GGAGTGGTAGCCGGTGCACA+AGG - chr1_1:49560166-49560185 None:intergenic 65.0%
CATGCCCACCAGCTTCCGCT+TGG + chr1_1:49560212-49560231 Msa0025950:intron 65.0%
GGGACGAACCAAGCGGAAGC+TGG - chr1_1:49560223-49560242 None:intergenic 65.0%
GTCCCCGAACCACACCGTAC+TGG + chr1_1:49560238-49560257 Msa0025950:intron 65.0%
GAGACCTCCCCCCTCCGCAA+TGG + chr1_1:49550076-49550095 Msa0025950:intron 70.0%
ACCTCCCCCCTCCGCAATGG+AGG + chr1_1:49550079-49550098 Msa0025950:intron 70.0%
ACCTCCATTGCGGAGGGGGG+AGG - chr1_1:49550083-49550102 None:intergenic 70.0%
! ACATGAGGTGGCGGCTCCGG+TGG - chr1_1:49550394-49550413 None:intergenic 70.0%
! TGAGGTGGTGGCTCCGGTGG+AGG - chr1_1:49559638-49559657 None:intergenic 70.0%
! TGAGGTGGCGGCTCCGGTGG+AGG - chr1_1:49550391-49550410 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 49548119 49561725 49548119 ID=Msa0025950;Name=Msa0025950
chr1_1 mRNA 49548119 49561725 49548119 ID=Msa0025950-mRNA-1;Parent=Msa0025950;Name=Msa0025950-mRNA-1;_AED=0.44;_eAED=0.52;_QI=507|0|0.33|1|0.2|0.33|6|0|233
chr1_1 exon 49548119 49548708 49548119 ID=Msa0025950-mRNA-1:exon:14258;Parent=Msa0025950-mRNA-1
chr1_1 exon 49549069 49549189 49549069 ID=Msa0025950-mRNA-1:exon:14259;Parent=Msa0025950-mRNA-1
chr1_1 exon 49557252 49557435 49557252 ID=Msa0025950-mRNA-1:exon:14260;Parent=Msa0025950-mRNA-1
chr1_1 exon 49561199 49561339 49561199 ID=Msa0025950-mRNA-1:exon:14261;Parent=Msa0025950-mRNA-1
chr1_1 exon 49561534 49561568 49561534 ID=Msa0025950-mRNA-1:exon:14262;Parent=Msa0025950-mRNA-1
chr1_1 exon 49561588 49561725 49561588 ID=Msa0025950-mRNA-1:exon:14263;Parent=Msa0025950-mRNA-1
chr1_1 five_prime_UTR 49548119 49548625 49548119 ID=Msa0025950-mRNA-1:five_prime_utr;Parent=Msa0025950-mRNA-1
chr1_1 CDS 49548626 49548708 49548626 ID=Msa0025950-mRNA-1:cds;Parent=Msa0025950-mRNA-1
chr1_1 CDS 49549069 49549189 49549069 ID=Msa0025950-mRNA-1:cds;Parent=Msa0025950-mRNA-1
chr1_1 CDS 49557252 49557435 49557252 ID=Msa0025950-mRNA-1:cds;Parent=Msa0025950-mRNA-1
chr1_1 CDS 49561199 49561339 49561199 ID=Msa0025950-mRNA-1:cds;Parent=Msa0025950-mRNA-1
chr1_1 CDS 49561534 49561568 49561534 ID=Msa0025950-mRNA-1:cds;Parent=Msa0025950-mRNA-1
chr1_1 CDS 49561588 49561725 49561588 ID=Msa0025950-mRNA-1:cds;Parent=Msa0025950-mRNA-1
Gene Sequence

>Msa0025950

ATGGGCCGGGACGGAGCTGCTGCAGAGATTGGAGATGGATCGCGACATAACTGTTTTTGGTTCGATAGAACTCGCAAACCAAATGGTGAAAAGATGTCCAATGTCAAATGGTCTGAATATGTTGAAGTGAAAGGGAGAGTTAAATTACATGATTTCGAAAAATACATTCAAGAACTTCCTCGCTCATGCAAGAAACGGTTGATGACAATAACTTCTTTATCAAAGGATAACAAATTCTTGTTGGTTAATCTTTTGAACCAAGAAATAAATCTATGGAATATTGAAGGCGATCCTAAGCTCGTTGGCAAGTACAATGGCCATAGGCCTGCTAGCTTTATTATAATGTCTTGCTTTGGTGGACTTGAGCAAGCTTTCATTGCTAGTGAAAACAATCTTGAGTTTGATTATTTTCTGCTGCCATCTATTGCTATAGAGGAAACACCATTTGTTGATTGGATAATTATTAATTCCATACATCCATCTATAGTTAAGTGTCTGCATCATGAAGCAAATATATGGACTGAAAAGGTTAATCTATCAACTCTGTTGCCTTATATATTATCGGGCATTATTCTAATTTATCCTTTTCCGAGTTTCAGACATGGCATTCAATTGCGTTTTGAGCATCAATGCCTACTTAAGGGAAGACATGTTTTTCCAGTAAAAAATTATTGTCACGGATATAAGCAAGTGAAGGACTGA
Protein sequence

>Msa0025950

MGRDGAAAEIGDGSRHNCFWFDRTRKPNGEKMSNVKWSEYVEVKGRVKLHDFEKYIQELPRSCKKRLMTITSLSKDNKFLLVNLLNQEINLWNIEGDPKLVGKYNGHRPASFIIMSCFGGLEQAFIASENNLEFDYFLLPSIAIEETPFVDWIIINSIHPSIVKCLHHEANIWTEKVNLSTLLPYILSGIILIYPFPSFRHGIQLRFEHQCLLKGRHVFPVKNYCHGYKQVKD*