AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026200 MtrunA17_Chr1g0181381 96.620 503 11 4 1 500 1 500 0.0 991
Msa0026200 MtrunA17_Chr7g0263941 57.434 491 101 15 4 492 3 387 9.85e-164 469
Msa0026200 MtrunA17_Chr4g0029521 47.389 517 201 18 3 490 1 475 1.92e-129 385
Msa0026200 MtrunA17_Chr4g0040571 45.248 484 190 12 32 471 33 485 8.89e-119 358
Msa0026200 MtrunA17_Chr1g0185121 77.561 205 33 3 34 226 36 239 1.60e-115 348
Msa0026200 MtrunA17_Chr2g0330171 47.894 451 153 13 38 471 46 431 4.50e-115 347
Msa0026200 MtrunA17_Chr8g0342421 88.623 167 18 1 38 204 62 227 7.21e-112 341
Msa0026200 MtrunA17_Chr8g0373541 84.091 176 22 2 26 201 26 195 6.52e-111 338
Msa0026200 MtrunA17_Chr2g0326381 67.686 229 62 5 38 266 32 248 4.35e-110 333
Msa0026200 MtrunA17_Chr1g0199101 87.952 166 18 2 36 200 44 208 2.10e-109 335
Msa0026200 MtrunA17_Chr1g0163001 86.982 169 20 2 34 201 38 205 5.24e-109 333
Msa0026200 MtrunA17_Chr1g0151351 44.749 438 179 10 38 471 41 419 5.81e-109 331
Msa0026200 MtrunA17_Chr1g0162971 53.541 353 117 13 38 371 41 365 5.73e-108 328
Msa0026200 MtrunA17_Chr1g0210821 83.333 168 27 1 41 208 47 213 2.35e-106 328
Msa0026200 MtrunA17_Chr1g0191991 80.925 173 32 1 38 210 63 234 1.83e-105 325
Msa0026200 MtrunA17_Chr7g0268961 51.240 363 125 8 48 406 32 346 9.02e-104 319
Msa0026200 MtrunA17_Chr3g0141431 74.857 175 44 0 21 195 5 179 9.82e-102 311
Msa0026200 MtrunA17_Chr2g0324991 86.364 132 17 1 49 180 3 133 4.68e-84 256
Msa0026200 MtrunA17_Chr6g0479921 64.968 157 53 2 38 193 29 184 1.38e-74 243
Msa0026200 MtrunA17_Chr8g0375521 64.103 156 55 1 38 192 27 182 1.77e-74 241
Msa0026200 MtrunA17_Chr2g0320341 34.839 155 88 4 47 188 224 378 2.26e-24 105
Msa0026200 MtrunA17_Chr3g0123941 36.538 156 92 4 43 191 113 268 2.38e-24 103
Msa0026200 MtrunA17_Chr1g0200421 31.224 237 128 10 52 260 236 465 4.17e-24 105
Msa0026200 MtrunA17_Chr5g0422571 32.000 200 118 5 10 200 65 255 1.27e-22 98.2
Msa0026200 MtrunA17_Chr7g0258011 32.558 172 99 5 54 209 176 346 8.56e-21 93.6
Msa0026200 MtrunA17_Chr8g0382121 33.987 153 91 4 46 188 104 256 1.58e-20 92.4
Msa0026200 MtrunA17_Chr4g0053341 33.113 151 92 4 49 191 69 218 2.21e-20 90.1
Msa0026200 MtrunA17_Chr1g0198651 34.028 144 83 4 59 191 107 249 5.30e-20 90.5
Msa0026200 MtrunA17_Chr4g0026521 34.932 146 86 4 54 191 118 262 2.45e-19 88.6
Msa0026200 MtrunA17_Chr1g0173841 31.737 167 97 5 59 209 220 385 8.48e-19 88.2
Msa0026200 MtrunA17_Chr8g0352011 33.333 156 87 5 59 198 171 325 9.03e-19 87.4
Msa0026200 MtrunA17_Chr2g0328921 33.562 146 88 4 54 191 138 282 1.67e-18 86.3
Msa0026200 MtrunA17_Chr2g0321291 34.247 146 87 4 54 191 133 277 3.76e-18 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026200 AT5G03150.1 47.905 549 179 15 1 491 1 500 3.96e-139 410
Msa0026200 AT3G50700.1 86.364 176 21 2 26 201 24 196 6.20e-114 344
Msa0026200 AT3G45260.2 52.332 386 117 10 38 396 39 384 2.33e-113 342
Msa0026200 AT3G45260.1 52.332 386 117 10 38 396 39 384 2.33e-113 342
Msa0026200 AT5G66730.1 84.699 183 21 2 19 201 19 194 7.23e-113 343
Msa0026200 AT5G44160.1 50.798 376 147 8 34 401 33 378 7.60e-112 339
Msa0026200 AT5G60470.3 73.077 208 49 2 3 205 2 207 1.16e-111 338
Msa0026200 AT5G60470.2 73.077 208 49 2 3 205 6 211 1.25e-111 338
Msa0026200 AT1G03840.1 51.667 360 145 8 34 371 37 389 2.82e-111 339
Msa0026200 AT2G02080.1 51.240 363 147 10 29 375 46 394 4.27e-111 339
Msa0026200 AT2G02080.4 51.240 363 147 10 29 375 46 394 4.27e-111 339
Msa0026200 AT2G02080.5 51.240 363 147 10 29 375 46 394 4.27e-111 339
Msa0026200 AT2G02080.3 51.240 363 147 10 29 375 46 394 4.27e-111 339
Msa0026200 AT4G02670.1 83.908 174 28 0 37 210 52 225 4.77e-111 335
Msa0026200 AT4G02670.2 83.908 174 28 0 37 210 54 227 6.11e-111 335
Msa0026200 AT3G13810.6 85.119 168 25 0 38 205 51 218 3.25e-109 333
Msa0026200 AT3G13810.4 85.119 168 25 0 38 205 70 237 4.87e-109 333
Msa0026200 AT3G13810.1 85.119 168 25 0 38 205 70 237 4.87e-109 333
Msa0026200 AT3G13810.5 85.119 168 25 0 38 205 65 232 5.15e-109 333
Msa0026200 AT1G03840.2 51.111 360 145 9 34 371 37 387 2.09e-107 329
Msa0026200 AT1G14580.1 78.736 174 36 1 37 210 52 224 2.37e-106 325
Msa0026200 AT1G14580.2 78.736 174 36 1 37 210 52 224 2.37e-106 325
Msa0026200 AT1G14580.3 78.736 174 36 1 37 210 66 238 3.21e-106 325
Msa0026200 AT2G02070.2 83.626 171 26 2 38 207 52 221 9.93e-105 325
Msa0026200 AT2G02070.1 83.626 171 26 2 38 207 52 221 9.93e-105 325
Msa0026200 AT5G44160.2 50.000 362 143 8 48 401 8 339 9.36e-104 317
Msa0026200 AT3G13810.3 85.987 157 22 0 49 205 68 224 3.39e-102 316
Msa0026200 AT3G13810.2 85.987 157 22 0 49 205 82 238 4.56e-102 316
Msa0026200 AT5G60470.1 82.166 157 28 0 49 205 46 202 4.81e-99 306
Msa0026200 AT2G02080.6 49.394 330 138 9 62 375 1 317 5.68e-94 292
Msa0026200 AT2G02080.2 49.394 330 138 9 62 375 1 317 5.68e-94 292
Msa0026200 AT2G01940.1 65.217 161 55 1 35 194 41 201 4.14e-76 246
Msa0026200 AT1G25250.3 63.580 162 57 2 33 192 28 189 2.67e-75 242
Msa0026200 AT1G68130.1 63.462 156 56 1 38 192 41 196 3.22e-74 241
Msa0026200 AT2G01940.3 64.198 162 56 2 35 194 41 202 1.43e-72 237
Msa0026200 AT1G25250.1 65.306 147 49 2 48 192 20 166 9.97e-71 229
Msa0026200 AT2G01940.2 63.393 112 40 1 84 194 1 112 7.89e-47 166
Msa0026200 AT1G25250.2 63.063 111 39 2 84 192 1 111 4.95e-46 163
Msa0026200 AT1G68130.2 61.818 110 41 1 84 192 1 110 6.64e-46 163
Msa0026200 AT5G22890.1 32.673 202 118 7 5 188 150 351 1.76e-24 105
Msa0026200 AT1G34370.3 34.810 158 90 4 47 191 14 171 1.30e-23 101
Msa0026200 AT1G34370.2 34.810 158 90 4 47 191 224 381 3.05e-23 103
Msa0026200 AT1G34370.1 34.810 158 90 4 47 191 224 381 3.05e-23 103
Msa0026200 AT1G13290.1 35.849 159 89 7 59 205 93 250 2.24e-21 95.1
Msa0026200 AT3G20880.1 34.247 146 87 4 54 191 243 387 3.91e-19 90.1
Msa0026200 AT1G34790.1 32.948 173 100 5 51 208 129 300 6.58e-19 87.8
Msa0026200 AT3G57670.1 31.548 168 98 5 54 205 204 370 2.12e-18 87.4
Msa0026200 AT1G51220.1 32.877 146 89 4 54 191 165 309 2.27e-18 86.7
Msa0026200 AT1G08290.1 37.037 135 75 4 66 191 179 312 4.27e-18 85.9

Find 129 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCTCTTTCACTTTCT+TGG 0.065661 1_1:-49867467 Msa0026200:five_prime_UTR
AGAATTTATGTTCACTTTCT+TGG 0.163618 1_1:-49867571 Msa0026200:five_prime_UTR
TTTCATTCAAGTTTGGTTTA+TGG 0.189070 1_1:-49867679 Msa0026200:five_prime_UTR
GGTGGTTCTGGTTCTGGTTC+TGG 0.197737 1_1:-49865738 Msa0026200:CDS
TTGGCTCTCTCTTGCTGTTT+TGG 0.202135 1_1:+49867881 None:intergenic
AAACAACAATTCTATGATTA+TGG 0.208656 1_1:-49866288 Msa0026200:CDS
CATTGAAGTTGAGGGTTTAT+TGG 0.210101 1_1:-49865556 Msa0026200:three_prime_UTR
TGGAAGATTTCTCTTCTTCT+TGG 0.211257 1_1:+49867299 None:intergenic
TTGATAAGACAATTCATATT+AGG 0.225612 1_1:+49865119 None:intergenic
GCATGTTTGTCCTAGTAAAA+TGG 0.251856 1_1:-49865375 Msa0026200:three_prime_UTR
CACCATGGTGGTTCTGGTTC+TGG 0.254794 1_1:-49865744 Msa0026200:CDS
GGAATTCCACATCCACAATT+TGG 0.260215 1_1:-49866350 Msa0026200:CDS
CAGAAGGAGCATTAGGTTTA+GGG 0.264157 1_1:+49867325 None:intergenic
AGTGAAGTGGATAGTGAAAA+AGG 0.270126 1_1:+49867387 None:intergenic
CAAGTAGATTTCAATGGAAT+TGG 0.274341 1_1:-49866311 Msa0026200:CDS
TATATAGCTATCTATGCTTT+TGG 0.280352 1_1:-49867816 Msa0026200:five_prime_UTR
GGAAGATTTCTCTTCTTCTT+GGG 0.283013 1_1:+49867300 None:intergenic
ACAGAAGGAGCATTAGGTTT+AGG 0.289450 1_1:+49867324 None:intergenic
GGAGCATTAGGTTTAGGGTT+AGG 0.301624 1_1:+49867330 None:intergenic
TTTGTTGCCATGAGTGTCTT+TGG 0.309658 1_1:+49867138 None:intergenic
ATTATGCACCATGGTGGTTC+TGG 0.314183 1_1:-49865750 Msa0026200:CDS
ATTGAAGTTGAGGGTTTATT+GGG 0.319475 1_1:-49865555 Msa0026200:three_prime_UTR
AAAGTGAACATAAATTCTTT+TGG 0.324772 1_1:+49867576 None:intergenic
ATAAACCAGAAGAACCAAAA+AGG 0.329036 1_1:+49866195 None:intergenic
TGGTTCTGGTTCAAACTCTA+TGG 0.329623 1_1:-49865724 Msa0026200:CDS
CTTCTTAATAACATCTTTGT+TGG 0.331545 1_1:+49867014 None:intergenic
GACCTCTTCTATGTAGTTGA+AGG 0.344711 1_1:+49867067 None:intergenic
GAGCATTAGGTTTAGGGTTA+GGG 0.346709 1_1:+49867331 None:intergenic
TTCTTTAAAGAGAGAGTTGT+TGG 0.351682 1_1:+49867612 None:intergenic
CATGGAATACTTCAAAATAT+TGG 0.352848 1_1:-49866374 Msa0026200:CDS
TTAACAAAGCCTGCTTCTTC+CGG 0.353821 1_1:-49866050 Msa0026200:CDS
TCCAATATGCAAATGATTCC+TGG 0.354400 1_1:-49867414 Msa0026200:exon
ACCAGGAATCATTTGCATAT+TGG 0.361072 1_1:+49867413 None:intergenic
TTGGGGACAGAAGGAGCATT+AGG 0.361121 1_1:+49867318 None:intergenic
GAGAACTTGTTTAGTGTAGT+AGG 0.362012 1_1:-49865504 Msa0026200:three_prime_UTR
GTCCCATTTCATGATTCCCT+TGG 0.362528 1_1:+49866231 None:intergenic
TTTCCTTGTTGATCACTTTG+TGG 0.363250 1_1:+49865780 None:intergenic
GAAGATACACCGAGAATTCA+TGG 0.369880 1_1:-49865255 Msa0026200:three_prime_UTR
TCTTCTTCATCATCAATGTT+TGG 0.374372 1_1:-49866113 Msa0026200:CDS
AGAGAGAGTTGTTGGCTACT+TGG 0.376991 1_1:+49867620 None:intergenic
ATAGTAATAATGTTATATTA+TGG 0.392988 1_1:-49867840 Msa0026200:five_prime_UTR
ATGAATATACCTGGTGTTCC+TGG 0.396720 1_1:+49867279 None:intergenic
AAACCAAGGGAATCATGAAA+TGG 0.400103 1_1:-49866234 Msa0026200:CDS
TTTATCTGAGATAGTTCAAA+TGG 0.400334 1_1:-49866177 Msa0026200:CDS
GAAAGGTTTGTGTGGGGACA+TGG 0.402763 1_1:-49865448 Msa0026200:three_prime_UTR
CACTATCCACTTCACTTGGT+GGG 0.416726 1_1:-49867380 Msa0026200:CDS
TATGAGCTTTCCAATCAGAT+TGG 0.425071 1_1:+49866845 None:intergenic
CTCTTCTTCTTGGGGACAGA+AGG 0.425270 1_1:+49867309 None:intergenic
TTCTACTAGTTCAGCTATGT+TGG 0.428171 1_1:-49865874 Msa0026200:CDS
TCTACTAGTTCAGCTATGTT+GGG 0.430741 1_1:-49865873 Msa0026200:CDS
TGGTGGACACAAGTCTTCTC+TGG 0.431235 1_1:+49866976 None:intergenic
AGAGCAATAACCTCGGCATC+TGG 0.433782 1_1:+49867165 None:intergenic
TCACTATCCACTTCACTTGG+TGG 0.459561 1_1:-49867381 Msa0026200:CDS
GATCTCTGTCTTAGCTTCCA+TGG 0.464655 1_1:+49867036 None:intergenic
CTGATTACCTGTGAATTGAA+TGG 0.467069 1_1:+49865593 None:intergenic
AATATGCAGTCCAATCTGAT+TGG 0.470247 1_1:-49866855 Msa0026200:CDS
AAAGGCCAAGTTTATCACTT+TGG 0.471302 1_1:-49866259 Msa0026200:CDS
AAGAAGAAGAGAAATCTTCC+AGG 0.472027 1_1:-49867297 Msa0026200:CDS
GAAGATTTCTCTTCTTCTTG+GGG 0.478434 1_1:+49867301 None:intergenic
TGTGTTCACATTGAAGTTGA+GGG 0.479868 1_1:-49865564 Msa0026200:three_prime_UTR
TTTCTTGGTGTGAGTGGTGG+AGG 0.481376 1_1:-49865669 Msa0026200:CDS
GCTTCTTCCATTCAATTCAC+AGG 0.484056 1_1:-49865600 Msa0026200:CDS
AAAGGTTTGTGTGGGGACAT+GGG 0.490639 1_1:-49865447 Msa0026200:three_prime_UTR
TATCATCAAGTAGATTTCAA+TGG 0.492025 1_1:-49866317 Msa0026200:CDS
TCTGTCTTAGCTTCCATGGA+AGG 0.492579 1_1:+49867040 None:intergenic
TAGGACAAACATGCATGACT+TGG 0.493009 1_1:+49865384 None:intergenic
GTGAGTGGTGGAGGAAGAAC+TGG 0.493538 1_1:-49865660 Msa0026200:CDS
AACCAAGGGAATCATGAAAT+GGG 0.497808 1_1:-49866233 Msa0026200:CDS
TCTGTGAAATATGCAACAAA+GGG 0.500256 1_1:-49867107 Msa0026200:CDS
CATCCACAATTTGGTTCACA+TGG 0.504169 1_1:-49866341 Msa0026200:CDS
TTGTGTTCACATTGAAGTTG+AGG 0.509153 1_1:-49865565 Msa0026200:three_prime_UTR
AATATTATACCTTGAGAAGA+GGG 0.509866 1_1:+49866780 None:intergenic
ATCTGTGAAATATGCAACAA+AGG 0.510966 1_1:-49867108 Msa0026200:CDS
AGCAGAAACAGTAACAGAAC+CGG 0.511338 1_1:+49866031 None:intergenic
GAAGAGGTCACAACCTTCCA+TGG 0.514490 1_1:-49867053 Msa0026200:CDS
TATTAGTTTCAGTCAGTACA+AGG 0.520799 1_1:+49867518 None:intergenic
GATTAACAAACGGTTCAGAA+AGG 0.526491 1_1:-49865465 Msa0026200:three_prime_UTR
AAGGTTTGTGTGGGGACATG+GGG 0.527639 1_1:-49865446 Msa0026200:three_prime_UTR
TTTAACCAAAGTGATAAACT+TGG 0.528252 1_1:+49866254 None:intergenic
AGATCACCAAGTGCTCTTGA+AGG 0.529586 1_1:+49866949 None:intergenic
CGGTTCAGAAAGGTTTGTGT+GGG 0.530237 1_1:-49865455 Msa0026200:three_prime_UTR
TCTTGTGAGGGATTAACAAA+CGG 0.530351 1_1:-49865475 Msa0026200:three_prime_UTR
TCCACACTGCATGTATTTGA+AGG 0.531648 1_1:-49865422 Msa0026200:three_prime_UTR
CCACATTCACATTCACAACA+TGG 0.532028 1_1:-49866404 Msa0026200:CDS
GCAGATGTTGAATTTGAAGC+AGG 0.534808 1_1:+49866086 None:intergenic
GGAATACTTCAAAATATTGG+TGG 0.535088 1_1:-49866371 Msa0026200:CDS
CATGACCCTTCAAGAGCACT+TGG 0.544018 1_1:-49866955 Msa0026200:CDS
ATGTTGGGAAATAGTAGTGC+AGG 0.545999 1_1:-49865858 Msa0026200:CDS
TGTGAACCAAATTGTGGATG+TGG 0.555768 1_1:+49866344 None:intergenic
ACTAAACCCACCAAGTGAAG+TGG 0.557454 1_1:+49867374 None:intergenic
TATCACTTTGGTTAAACCAA+GGG 0.558927 1_1:-49866247 Msa0026200:CDS
AGAAATCTTCCAGGAACACC+AGG 0.564051 1_1:-49867288 Msa0026200:intron
CAAGTGCTCTTGAAGGGTCA+TGG 0.570425 1_1:+49866956 None:intergenic
GAAAGCACGGTGAAAAGAAG+TGG 0.572977 1_1:-49866900 Msa0026200:CDS
GTAACAGAACCGGAAGAAGC+AGG 0.576220 1_1:+49866041 None:intergenic
AAATATTATACCTTGAGAAG+AGG 0.578176 1_1:+49866779 None:intergenic
AACCTTCAACTACATAGAAG+AGG 0.579451 1_1:-49867069 Msa0026200:CDS
AGTAGGAGTACTTCTTGTGA+GGG 0.581078 1_1:-49865487 Msa0026200:three_prime_UTR
GCTGAACTAGTAGAAGAAGA+AGG 0.581667 1_1:+49865882 None:intergenic
TTATCTGAGATAGTTCAAAT+GGG 0.582881 1_1:-49866176 Msa0026200:CDS
ACTGTGGCACCCTCTTCTCA+AGG 0.585281 1_1:-49866789 Msa0026200:intron
ACGGTTCAGAAAGGTTTGTG+TGG 0.588042 1_1:-49865456 Msa0026200:three_prime_UTR
GATCACCAAGTGCTCTTGAA+GGG 0.591900 1_1:+49866950 None:intergenic
AGAGCACTTGGTGATCTCAC+AGG 0.592028 1_1:-49866943 Msa0026200:CDS
CCATGTTGTGAATGTGAATG+TGG 0.593588 1_1:+49866404 None:intergenic
TCACAACATGGTTTATCACA+TGG 0.594739 1_1:-49866392 Msa0026200:CDS
CTATGATTATGGAGCAACAA+AGG 0.601378 1_1:-49866277 Msa0026200:CDS
TTATCACTTTGGTTAAACCA+AGG 0.601736 1_1:-49866248 Msa0026200:CDS
AGGACAAACATGCATGACTT+GGG 0.604620 1_1:+49865385 None:intergenic
TAGTAGGAGTACTTCTTGTG+AGG 0.610431 1_1:-49865488 Msa0026200:three_prime_UTR
TCTTGAGGTAGAAACTGATG+TGG 0.615192 1_1:+49865636 None:intergenic
TGATGAAGAAGAACAAAGCA+AGG 0.620223 1_1:+49866124 None:intergenic
TATCCATGTGAACCAAATTG+TGG 0.627461 1_1:+49866338 None:intergenic
AAGCACTTTAGTAGAAAGCA+CGG 0.627488 1_1:-49866913 Msa0026200:CDS
TTGAATATTATGCACCATGG+TGG 0.642049 1_1:-49865756 Msa0026200:CDS
TCTATCACCAAAGACACTCA+TGG 0.646655 1_1:-49867145 Msa0026200:CDS
AGAAGAGCAGTAGCTGACAT+TGG 0.651547 1_1:+49866005 None:intergenic
CTATACAGATCCAGATGCCG+AGG 0.652908 1_1:-49867175 Msa0026200:intron
GTGCTCTTGAAGGGTCATGG+TGG 0.656702 1_1:+49866959 None:intergenic
AGGTTTGTGTGGGGACATGG+GGG 0.663023 1_1:-49865445 Msa0026200:three_prime_UTR
AGAGAATACAAATGTGACTG+TGG 0.678918 1_1:-49866805 Msa0026200:CDS
TCCTTCAAATACATGCAGTG+TGG 0.680368 1_1:+49865421 None:intergenic
CAGTACAAGGAAGAAAACAA+TGG 0.689181 1_1:+49867531 None:intergenic
ACAAATTATAAACAATGACA+AGG 0.689426 1_1:+49865325 None:intergenic
AACCAGAACCAGAACCACCA+TGG 0.691492 1_1:+49865742 None:intergenic
AAATTGAATATTATGCACCA+TGG 0.694171 1_1:-49865759 Msa0026200:CDS
GGTTCAGAAAGGTTTGTGTG+GGG 0.700947 1_1:-49865454 Msa0026200:three_prime_UTR
TGGTGATAGAGCAATAACCT+CGG 0.716517 1_1:+49867158 None:intergenic
GGACCACAAAGTGATCAACA+AGG 0.742344 1_1:-49865783 Msa0026200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTAATAATGTTATATTA+TGG - chr1_1:49865113-49865132 Msa0026200:three_prime_UTR 10.0%
!!! TTTATATAGTTTTCTTTTTC+AGG - chr1_1:49865235-49865254 Msa0026200:three_prime_UTR 15.0%
!!! CTTTTTCATATATTTCAAAT+TGG - chr1_1:49865737-49865756 Msa0026200:CDS 15.0%
!!! TCTTCAATTATTTTTCATTA+TGG + chr1_1:49867683-49867702 None:intergenic 15.0%
!!! TTTCAGGCTTTAAATATTTT+TGG - chr1_1:49865251-49865270 Msa0026200:three_prime_UTR 20.0%
!!! AAAGTGAACATAAATTCTTT+TGG + chr1_1:49865380-49865399 None:intergenic 20.0%
!! CATATATTTCAAATTGGTAA+TGG - chr1_1:49865743-49865762 Msa0026200:CDS 20.0%
!! GAATTTAATGCTTTCTTTAA+TGG - chr1_1:49866327-49866346 Msa0026200:CDS 20.0%
!!! CTAAATTTTAAGAATGAAGA+AGG - chr1_1:49866510-49866529 Msa0026200:CDS 20.0%
!! AAACAACAATTCTATGATTA+TGG - chr1_1:49866665-49866684 Msa0026200:intron 20.0%
!!! TTTGATCAATTTTTTATGCA+TGG - chr1_1:49867149-49867168 Msa0026200:CDS 20.0%
!! ACAAATTATAAACAATGACA+AGG + chr1_1:49867631-49867650 None:intergenic 20.0%
!! TTGATAAGACAATTCATATT+AGG + chr1_1:49867837-49867856 None:intergenic 20.0%
!!! TTCTCTTTTTTTCTATGTCT+TGG + chr1_1:49865094-49865113 None:intergenic 25.0%
!! TATATAGCTATCTATGCTTT+TGG - chr1_1:49865137-49865156 Msa0026200:three_prime_UTR 25.0%
!!! TTTTTGGTTTCATTCAAGTT+TGG - chr1_1:49865267-49865286 Msa0026200:three_prime_UTR 25.0%
!! TTTCATTCAAGTTTGGTTTA+TGG - chr1_1:49865274-49865293 Msa0026200:three_prime_UTR 25.0%
!! TATGGATTTTTCTTGTCTTT+TGG - chr1_1:49865292-49865311 Msa0026200:three_prime_UTR 25.0%
!!! CTCTCTCTTTAAAGAATTTT+TGG - chr1_1:49865348-49865367 Msa0026200:three_prime_UTR 25.0%
!! TGAACATAAATTCTTTTGGA+TGG + chr1_1:49865376-49865395 None:intergenic 25.0%
! AGAATTTATGTTCACTTTCT+TGG - chr1_1:49865382-49865401 Msa0026200:three_prime_UTR 25.0%
!! TAAAAACCTTTGAAAGTTAG+TGG - chr1_1:49865456-49865475 Msa0026200:three_prime_UTR 25.0%
! AAAAAACCACTAACTTTCAA+AGG + chr1_1:49865465-49865484 None:intergenic 25.0%
! TAATCATGAATGAATATACC+TGG + chr1_1:49865686-49865705 None:intergenic 25.0%
! CTTCTTAATAACATCTTTGT+TGG + chr1_1:49865942-49865961 None:intergenic 25.0%
! AATATTATACCTTGAGAAGA+GGG + chr1_1:49866176-49866195 None:intergenic 25.0%
! AAATATTATACCTTGAGAAG+AGG + chr1_1:49866177-49866196 None:intergenic 25.0%
! ACAAAAGATTGGTGAATAAA+AGG + chr1_1:49866210-49866229 None:intergenic 25.0%
! TTATCACAGAAACAAAAGAT+TGG + chr1_1:49866221-49866240 None:intergenic 25.0%
!!! GGATTATATTTTTATGTGTC+TGG - chr1_1:49866348-49866367 Msa0026200:CDS 25.0%
!!! TGTTGATATTTTGAACAGAA+AGG - chr1_1:49866407-49866426 Msa0026200:CDS 25.0%
! CATGGAATACTTCAAAATAT+TGG - chr1_1:49866579-49866598 Msa0026200:intron 25.0%
! TATCATCAAGTAGATTTCAA+TGG - chr1_1:49866636-49866655 Msa0026200:intron 25.0%
! TTTAACCAAAGTGATAAACT+TGG + chr1_1:49866702-49866721 None:intergenic 25.0%
!! TTTATCTGAGATAGTTCAAA+TGG - chr1_1:49866776-49866795 Msa0026200:intron 25.0%
!! TTATCTGAGATAGTTCAAAT+GGG - chr1_1:49866777-49866796 Msa0026200:intron 25.0%
! AACTAGAACTAAAAATGGAA+GGG + chr1_1:49867034-49867053 None:intergenic 25.0%
! AAACTAGAACTAAAAATGGA+AGG + chr1_1:49867035-49867054 None:intergenic 25.0%
!!! TCCATTTTTAGTTCTAGTTT+TGG - chr1_1:49867035-49867054 Msa0026200:CDS 25.0%
! ACCAAAACTAGAACTAAAAA+TGG + chr1_1:49867039-49867058 None:intergenic 25.0%
! AAATTGAATATTATGCACCA+TGG - chr1_1:49867194-49867213 Msa0026200:intron 25.0%
!! AATTTGACAAGAGATTTTCT+TGG - chr1_1:49867269-49867288 Msa0026200:intron 25.0%
!! ACAACATTAACCATTTTACT+AGG + chr1_1:49867591-49867610 None:intergenic 25.0%
!! AATCTTTTACCATGAATTCT+CGG + chr1_1:49867710-49867729 None:intergenic 25.0%
! TTCTTTAAAGAGAGAGTTGT+TGG + chr1_1:49865344-49865363 None:intergenic 30.0%
! TATTAGTTTCAGTCAGTACA+AGG + chr1_1:49865438-49865457 None:intergenic 30.0%
ATCTGTGAAATATGCAACAA+AGG - chr1_1:49865845-49865864 Msa0026200:CDS 30.0%
TCTGTGAAATATGCAACAAA+GGG - chr1_1:49865846-49865865 Msa0026200:CDS 30.0%
!!! AGATTGGACTGCATATTTTT+TGG + chr1_1:49866095-49866114 None:intergenic 30.0%
AAAGCTCATACAAAAACATG+TGG - chr1_1:49866121-49866140 Msa0026200:CDS 30.0%
GGAATACTTCAAAATATTGG+TGG - chr1_1:49866582-49866601 Msa0026200:intron 30.0%
CAAGTAGATTTCAATGGAAT+TGG - chr1_1:49866642-49866661 Msa0026200:intron 30.0%
TTATCACTTTGGTTAAACCA+AGG - chr1_1:49866705-49866724 Msa0026200:intron 30.0%
TATCACTTTGGTTAAACCAA+GGG - chr1_1:49866706-49866725 Msa0026200:intron 30.0%
!! CAAAGTTCTAATTCCCTTTT+TGG - chr1_1:49866744-49866763 Msa0026200:intron 30.0%
TAAACCAGAAGAACCAAAAA+GGG + chr1_1:49866760-49866779 None:intergenic 30.0%
ATAAACCAGAAGAACCAAAA+AGG + chr1_1:49866761-49866780 None:intergenic 30.0%
TCTTCTTCATCATCAATGTT+TGG - chr1_1:49866840-49866859 Msa0026200:CDS 30.0%
ATTGAAGTTGAGGGTTTATT+GGG - chr1_1:49867398-49867417 Msa0026200:CDS 30.0%
! GGGAAATTCATTGAAGTTTT+TGG - chr1_1:49867418-49867437 Msa0026200:exon 30.0%
!!! TCATTGAAGTTTTTGGTGTT+TGG - chr1_1:49867425-49867444 Msa0026200:exon 30.0%
!!! TGTTTTTTGAGACAAGTGAA+GGG - chr1_1:49867655-49867674 Msa0026200:five_prime_UTR 30.0%
CAGTACAAGGAAGAAAACAA+TGG + chr1_1:49865425-49865444 None:intergenic 35.0%
CTTCTTCTCTTTCACTTTCT+TGG - chr1_1:49865486-49865505 Msa0026200:three_prime_UTR 35.0%
TCCAATATGCAAATGATTCC+TGG - chr1_1:49865539-49865558 Msa0026200:three_prime_UTR 35.0%
ACCAGGAATCATTTGCATAT+TGG + chr1_1:49865543-49865562 None:intergenic 35.0%
GTGAAGTGGATAGTGAAAAA+GGG + chr1_1:49865568-49865587 None:intergenic 35.0%
AGTGAAGTGGATAGTGAAAA+AGG + chr1_1:49865569-49865588 None:intergenic 35.0%
! TTTTCACTATCCACTTCACT+TGG - chr1_1:49865569-49865588 Msa0026200:three_prime_UTR 35.0%
GAAGATTTCTCTTCTTCTTG+GGG + chr1_1:49865655-49865674 None:intergenic 35.0%
GGAAGATTTCTCTTCTTCTT+GGG + chr1_1:49865656-49865675 None:intergenic 35.0%
TGGAAGATTTCTCTTCTTCT+TGG + chr1_1:49865657-49865676 None:intergenic 35.0%
AAGAAGAAGAGAAATCTTCC+AGG - chr1_1:49865656-49865675 Msa0026200:CDS 35.0%
!! GTTGAAGGTTTTGATCTCTT+TGG + chr1_1:49865874-49865893 None:intergenic 35.0%
AACCTTCAACTACATAGAAG+AGG - chr1_1:49865884-49865903 Msa0026200:CDS 35.0%
AAGCACTTTAGTAGAAAGCA+CGG - chr1_1:49866040-49866059 Msa0026200:CDS 35.0%
AATATGCAGTCCAATCTGAT+TGG - chr1_1:49866098-49866117 Msa0026200:CDS 35.0%
TATGAGCTTTCCAATCAGAT+TGG + chr1_1:49866111-49866130 None:intergenic 35.0%
AGAGAATACAAATGTGACTG+TGG - chr1_1:49866148-49866167 Msa0026200:CDS 35.0%
TCATATTTGTGACATGTACG+AGG - chr1_1:49866272-49866291 Msa0026200:CDS 35.0%
CCTAACACAACATACATGAT+TGG + chr1_1:49866303-49866322 None:intergenic 35.0%
CCAATCATGTATGTTGTGTT+AGG - chr1_1:49866300-49866319 Msa0026200:CDS 35.0%
TCACAACATGGTTTATCACA+TGG - chr1_1:49866561-49866580 Msa0026200:intron 35.0%
TATCCATGTGAACCAAATTG+TGG + chr1_1:49866618-49866637 None:intergenic 35.0%
CTATGATTATGGAGCAACAA+AGG - chr1_1:49866676-49866695 Msa0026200:intron 35.0%
AAAGGCCAAGTTTATCACTT+TGG - chr1_1:49866694-49866713 Msa0026200:intron 35.0%
AAACCAAGGGAATCATGAAA+TGG - chr1_1:49866719-49866738 Msa0026200:intron 35.0%
AACCAAGGGAATCATGAAAT+GGG - chr1_1:49866720-49866739 Msa0026200:intron 35.0%
!!! AATTCCCTTTTTGGTTCTTC+TGG - chr1_1:49866753-49866772 Msa0026200:intron 35.0%
TGATGAAGAAGAACAAAGCA+AGG + chr1_1:49866832-49866851 None:intergenic 35.0%
TTCTACTAGTTCAGCTATGT+TGG - chr1_1:49867079-49867098 Msa0026200:CDS 35.0%
TCTACTAGTTCAGCTATGTT+GGG - chr1_1:49867080-49867099 Msa0026200:CDS 35.0%
TTTCCTTGTTGATCACTTTG+TGG + chr1_1:49867176-49867195 None:intergenic 35.0%
TTGAATATTATGCACCATGG+TGG - chr1_1:49867197-49867216 Msa0026200:intron 35.0%
!! GCAAATTTTGCTATCTCTTG+AGG + chr1_1:49867335-49867354 None:intergenic 35.0%
CTGATTACCTGTGAATTGAA+TGG + chr1_1:49867363-49867382 None:intergenic 35.0%
TTGTGTTCACATTGAAGTTG+AGG - chr1_1:49867388-49867407 Msa0026200:CDS 35.0%
TGTGTTCACATTGAAGTTGA+GGG - chr1_1:49867389-49867408 Msa0026200:CDS 35.0%
CATTGAAGTTGAGGGTTTAT+TGG - chr1_1:49867397-49867416 Msa0026200:CDS 35.0%
! GAGAACTTGTTTAGTGTAGT+AGG - chr1_1:49867449-49867468 Msa0026200:five_prime_UTR 35.0%
TCTTGTGAGGGATTAACAAA+CGG - chr1_1:49867478-49867497 Msa0026200:five_prime_UTR 35.0%
GATTAACAAACGGTTCAGAA+AGG - chr1_1:49867488-49867507 Msa0026200:five_prime_UTR 35.0%
GCATGTTTGTCCTAGTAAAA+TGG - chr1_1:49867578-49867597 Msa0026200:five_prime_UTR 35.0%
!!! CTGTTTTTTGAGACAAGTGA+AGG - chr1_1:49867654-49867673 Msa0026200:five_prime_UTR 35.0%
!!! TCTCTTGCTGTTTTGGTCTT+TGG + chr1_1:49865068-49865087 None:intergenic 40.0%
! GAGCATTAGGTTTAGGGTTA+GGG + chr1_1:49865625-49865644 None:intergenic 40.0%
!! CAGAAGGAGCATTAGGTTTA+GGG + chr1_1:49865631-49865650 None:intergenic 40.0%
!! ACAGAAGGAGCATTAGGTTT+AGG + chr1_1:49865632-49865651 None:intergenic 40.0%
ATGAATATACCTGGTGTTCC+TGG + chr1_1:49865677-49865696 None:intergenic 40.0%
TGGTGATAGAGCAATAACCT+CGG + chr1_1:49865798-49865817 None:intergenic 40.0%
TCTATCACCAAAGACACTCA+TGG - chr1_1:49865808-49865827 Msa0026200:CDS 40.0%
TTTGTTGCCATGAGTGTCTT+TGG + chr1_1:49865818-49865837 None:intergenic 40.0%
GACCTCTTCTATGTAGTTGA+AGG + chr1_1:49865889-49865908 None:intergenic 40.0%
! CAGAGCTTTTTGTGATGCAT+TGG - chr1_1:49866446-49866465 Msa0026200:CDS 40.0%
CCATGTTGTGAATGTGAATG+TGG + chr1_1:49866552-49866571 None:intergenic 40.0%
CCACATTCACATTCACAACA+TGG - chr1_1:49866549-49866568 Msa0026200:intron 40.0%
GGAATTCCACATCCACAATT+TGG - chr1_1:49866603-49866622 Msa0026200:intron 40.0%
TGTGAACCAAATTGTGGATG+TGG + chr1_1:49866612-49866631 None:intergenic 40.0%
! CATCCACAATTTGGTTCACA+TGG - chr1_1:49866612-49866631 Msa0026200:intron 40.0%
! GCAGATGTTGAATTTGAAGC+AGG + chr1_1:49866870-49866889 None:intergenic 40.0%
TTAACAAAGCCTGCTTCTTC+CGG - chr1_1:49866903-49866922 Msa0026200:CDS 40.0%
AGCAGAAACAGTAACAGAAC+CGG + chr1_1:49866925-49866944 None:intergenic 40.0%
TCTGCAAAAAGCAGCTCAAA+TGG - chr1_1:49866968-49866987 Msa0026200:CDS 40.0%
CTGCAAAAAGCAGCTCAAAT+GGG - chr1_1:49866969-49866988 Msa0026200:CDS 40.0%
GCTGAACTAGTAGAAGAAGA+AGG + chr1_1:49867074-49867093 None:intergenic 40.0%
ATGTTGGGAAATAGTAGTGC+AGG - chr1_1:49867095-49867114 Msa0026200:CDS 40.0%
!! TGGTTCTGGTTCAAACTCTA+TGG - chr1_1:49867229-49867248 Msa0026200:intron 40.0%
!! AGAGATTTTCTTGGTGTGAG+TGG - chr1_1:49867278-49867297 Msa0026200:intron 40.0%
TCTTGAGGTAGAAACTGATG+TGG + chr1_1:49867320-49867339 None:intergenic 40.0%
GCTTCTTCCATTCAATTCAC+AGG - chr1_1:49867353-49867372 Msa0026200:CDS 40.0%
!! TAGTAGGAGTACTTCTTGTG+AGG - chr1_1:49867465-49867484 Msa0026200:five_prime_UTR 40.0%
!! AGTAGGAGTACTTCTTGTGA+GGG - chr1_1:49867466-49867485 Msa0026200:five_prime_UTR 40.0%
TCCACACTGCATGTATTTGA+AGG - chr1_1:49867531-49867550 Msa0026200:five_prime_UTR 40.0%
TCCTTCAAATACATGCAGTG+TGG + chr1_1:49867535-49867554 None:intergenic 40.0%
AGGACAAACATGCATGACTT+GGG + chr1_1:49867571-49867590 None:intergenic 40.0%
TAGGACAAACATGCATGACT+TGG + chr1_1:49867572-49867591 None:intergenic 40.0%
GAAGATACACCGAGAATTCA+TGG - chr1_1:49867698-49867717 Msa0026200:five_prime_UTR 40.0%
!!! TTGGCTCTCTCTTGCTGTTT+TGG + chr1_1:49865075-49865094 None:intergenic 45.0%
! AGAGAGAGTTGTTGGCTACT+TGG + chr1_1:49865336-49865355 None:intergenic 45.0%
GATAGTGAAAAAGGGTCACC+AGG + chr1_1:49865560-49865579 None:intergenic 45.0%
TCACTATCCACTTCACTTGG+TGG - chr1_1:49865572-49865591 Msa0026200:exon 45.0%
CACTATCCACTTCACTTGGT+GGG - chr1_1:49865573-49865592 Msa0026200:exon 45.0%
ACTAAACCCACCAAGTGAAG+TGG + chr1_1:49865582-49865601 None:intergenic 45.0%
! GGAGCATTAGGTTTAGGGTT+AGG + chr1_1:49865626-49865645 None:intergenic 45.0%
AGAAATCTTCCAGGAACACC+AGG - chr1_1:49865665-49865684 Msa0026200:CDS 45.0%
TCTGTCTTAGCTTCCATGGA+AGG + chr1_1:49865916-49865935 None:intergenic 45.0%
GATCTCTGTCTTAGCTTCCA+TGG + chr1_1:49865920-49865939 None:intergenic 45.0%
GATCACCAAGTGCTCTTGAA+GGG + chr1_1:49866006-49866025 None:intergenic 45.0%
AGATCACCAAGTGCTCTTGA+AGG + chr1_1:49866007-49866026 None:intergenic 45.0%
! GAAAGCACGGTGAAAAGAAG+TGG - chr1_1:49866053-49866072 Msa0026200:CDS 45.0%
GTCCCATTTCATGATTCCCT+TGG + chr1_1:49866725-49866744 None:intergenic 45.0%
AGAAGAGCAGTAGCTGACAT+TGG + chr1_1:49866951-49866970 None:intergenic 45.0%
GGACCACAAAGTGATCAACA+AGG - chr1_1:49867170-49867189 Msa0026200:CDS 45.0%
ATTATGCACCATGGTGGTTC+TGG - chr1_1:49867203-49867222 Msa0026200:intron 45.0%
!! GATTTTCTTGGTGTGAGTGG+TGG - chr1_1:49867281-49867300 Msa0026200:intron 45.0%
ACGGTTCAGAAAGGTTTGTG+TGG - chr1_1:49867497-49867516 Msa0026200:five_prime_UTR 45.0%
CGGTTCAGAAAGGTTTGTGT+GGG - chr1_1:49867498-49867517 Msa0026200:five_prime_UTR 45.0%
GGTTCAGAAAGGTTTGTGTG+GGG - chr1_1:49867499-49867518 Msa0026200:five_prime_UTR 45.0%
AAAGGTTTGTGTGGGGACAT+GGG - chr1_1:49867506-49867525 Msa0026200:five_prime_UTR 45.0%
!! TTGGGGACAGAAGGAGCATT+AGG + chr1_1:49865638-49865657 None:intergenic 50.0%
CTCTTCTTCTTGGGGACAGA+AGG + chr1_1:49865647-49865666 None:intergenic 50.0%
CTATACAGATCCAGATGCCG+AGG - chr1_1:49865778-49865797 Msa0026200:CDS 50.0%
AGAGCAATAACCTCGGCATC+TGG + chr1_1:49865791-49865810 None:intergenic 50.0%
GAAGAGGTCACAACCTTCCA+TGG - chr1_1:49865900-49865919 Msa0026200:CDS 50.0%
! TGGTGGACACAAGTCTTCTC+TGG + chr1_1:49865980-49865999 None:intergenic 50.0%
CAAGTGCTCTTGAAGGGTCA+TGG + chr1_1:49866000-49866019 None:intergenic 50.0%
!! CATGACCCTTCAAGAGCACT+TGG - chr1_1:49865998-49866017 Msa0026200:CDS 50.0%
! AGAGCACTTGGTGATCTCAC+AGG - chr1_1:49866010-49866029 Msa0026200:CDS 50.0%
GTAACAGAACCGGAAGAAGC+AGG + chr1_1:49866915-49866934 None:intergenic 50.0%
AACCAGAACCAGAACCACCA+TGG + chr1_1:49867214-49867233 None:intergenic 50.0%
! TTTCTTGGTGTGAGTGGTGG+AGG - chr1_1:49867284-49867303 Msa0026200:intron 50.0%
GAAAGGTTTGTGTGGGGACA+TGG - chr1_1:49867505-49867524 Msa0026200:five_prime_UTR 50.0%
AAGGTTTGTGTGGGGACATG+GGG - chr1_1:49867507-49867526 Msa0026200:five_prime_UTR 50.0%
GTGCTCTTGAAGGGTCATGG+TGG + chr1_1:49865997-49866016 None:intergenic 55.0%
ACTGTGGCACCCTCTTCTCA+AGG - chr1_1:49866164-49866183 Msa0026200:CDS 55.0%
!! CACCATGGTGGTTCTGGTTC+TGG - chr1_1:49867209-49867228 Msa0026200:intron 55.0%
!! GGTGGTTCTGGTTCTGGTTC+TGG - chr1_1:49867215-49867234 Msa0026200:intron 55.0%
! GTGAGTGGTGGAGGAAGAAC+TGG - chr1_1:49867293-49867312 Msa0026200:CDS 55.0%
AGGTTTGTGTGGGGACATGG+GGG - chr1_1:49867508-49867527 Msa0026200:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 49865055 49867920 49865055 ID=Msa0026200;Name=Msa0026200
chr1_1 mRNA 49865055 49867920 49865055 ID=Msa0026200-mRNA-1;Parent=Msa0026200;Name=Msa0026200-mRNA-1;_AED=0.02;_eAED=0.02;_QI=490|1|1|1|1|0.66|3|535|500
chr1_1 exon 49865055 49866550 49865055 ID=Msa0026200-mRNA-1:exon:14407;Parent=Msa0026200-mRNA-1
chr1_1 exon 49866790 49867189 49866790 ID=Msa0026200-mRNA-1:exon:14406;Parent=Msa0026200-mRNA-1
chr1_1 exon 49867289 49867920 49867289 ID=Msa0026200-mRNA-1:exon:14405;Parent=Msa0026200-mRNA-1
chr1_1 five_prime_UTR 49867431 49867920 49867431 ID=Msa0026200-mRNA-1:five_prime_utr;Parent=Msa0026200-mRNA-1
chr1_1 CDS 49867289 49867430 49867289 ID=Msa0026200-mRNA-1:cds;Parent=Msa0026200-mRNA-1
chr1_1 CDS 49866790 49867189 49866790 ID=Msa0026200-mRNA-1:cds;Parent=Msa0026200-mRNA-1
chr1_1 CDS 49865590 49866550 49865590 ID=Msa0026200-mRNA-1:cds;Parent=Msa0026200-mRNA-1
chr1_1 three_prime_UTR 49865055 49865589 49865055 ID=Msa0026200-mRNA-1:three_prime_utr;Parent=Msa0026200-mRNA-1
Gene Sequence

>Msa0026200

ATGCAAATGATTCCTGGTGACCCTTTTTCACTATCCACTTCACTTGGTGGGTTTAGTACTCAAGAGCAAAACACAAACCCTAACCCTAAACCTAATGCTCCTTCTGTCCCCAAGAAGAAGAGAAATCTTCCAGGAACACCAGATCCAGATGCCGAGGTTATTGCTCTATCACCAAAGACACTCATGGCAACAAACAGATTCATCTGTGAAATATGCAACAAAGGGTTCCAAAGAGATCAAAACCTTCAACTACATAGAAGAGGTCACAACCTTCCATGGAAGCTAAGACAGAGATCCAACAAAGATGTTATTAAGAAGAAAGTTTACATCTGTCCAGAGAAGACTTGTGTCCACCATGACCCTTCAAGAGCACTTGGTGATCTCACAGGTATAAAAAAGCACTTTAGTAGAAAGCACGGTGAAAAGAAGTGGAAATGTGAAAAATGTTCCAAAAAATATGCAGTCCAATCTGATTGGAAAGCTCATACAAAAACATGTGGTACAAGAGAATACAAATGTGACTGTGGCACCCTCTTCTCAAGAAAGGATAGTTTCATTACACACAGAGCTTTTTGTGATGCATTGGCAGAAGAGAGTGCAAGAGTAACTTCAGTTACAACAACAAATCTAAATTTTAAGAATGAAGAAGGTAGTGCTATGATGAATCCACATTCACATTCACAACATGGTTTATCACATGGAATACTTCAAAATATTGGTGGAATTCCACATCCACAATTTGGTTCACATGGATATCATCAAGTAGATTTCAATGGAATTGGAAACAACAATTCTATGATTATGGAGCAACAAAGGCCAAGTTTATCACTTTGGTTAAACCAAGGGAATCATGAAATGGGACAAAGTTCTAATTCCCTTTTTGGTTCTTCTGGTTTATCTGAGATAGTTCAAATGGGAAATGCTACTACTACTAATAATAATAATGCCTTGCTTTGTTCTTCTTCATCATCAATGTTTGGTGTACCTGCTTCAAATTCAACATCTGCTGCAAATCTTTCTTTAACAAAGCCTGCTTCTTCCGGTTCTGTTACTGTTTCTGCTACACCAATGTCAGCTACTGCTCTTCTGCAAAAAGCAGCTCAAATGGGTTCAACTAGAAGCAATACTAGTAATGATAATAATAACAACCCTTCCATTTTTAGTTCTAGTTTTGGTGTAATGACATCACCTTCTTCTTCTACTAGTTCAGCTATGTTGGGAAATAGTAGTGCAGGTGCAGCTGCTAATTATAGCTCAAATAGTAGTTTTGATCAATTTTTTATGCATGGACCACAAAGTGATCAACAAGGAAAATTGAATATTATGCACCATGGTGGTTCTGGTTCTGGTTCTGGTTCAAACTCTATGGATCAAGTACAACATAGTAATTTGACAAGAGATTTTCTTGGTGTGAGTGGTGGAGGAAGAACTGGTCCACATCAGTTTCTACCTCAAGAGATAGCAAAATTTGCTTCTTCCATTCAATTCACAGGTAATCAGTGA
Protein sequence

>Msa0026200

MQMIPGDPFSLSTSLGGFSTQEQNTNPNPKPNAPSVPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKDVIKKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARVTSVTTTNLNFKNEEGSAMMNPHSHSQHGLSHGILQNIGGIPHPQFGSHGYHQVDFNGIGNNNSMIMEQQRPSLSLWLNQGNHEMGQSSNSLFGSSGLSEIVQMGNATTTNNNNALLCSSSSSMFGVPASNSTSAANLSLTKPASSGSVTVSATPMSATALLQKAAQMGSTRSNTSNDNNNNPSIFSSSFGVMTSPSSSTSSAMLGNSSAGAAANYSSNSSFDQFFMHGPQSDQQGKLNIMHHGGSGSGSGSNSMDQVQHSNLTRDFLGVSGGGRTGPHQFLPQEIAKFASSIQFTGNQ*