Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379650 | XP_003602888.1 | 98.058 | 309 | 6 | 0 | 119 | 427 | 1 | 309 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379650 | sp|Q9LRH6|GAT25_ARATH | 63.021 | 192 | 68 | 3 | 187 | 376 | 81 | 271 | 3.36e-74 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379650 | G7J4K3 | 98.058 | 309 | 6 | 0 | 119 | 427 | 1 | 309 | 0.0 | 632 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0379650 | TF | C2C2-GATA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0379650 | 0.800899 | 1.160622e-48 | -8.615850e-47 |
| Msa0001940 | Msa0379650 | 0.804218 | 2.400244e-49 | -8.615850e-47 |
| Msa0017950 | Msa0379650 | 0.803146 | 4.006216e-49 | -8.615850e-47 |
| Msa0024400 | Msa0379650 | 0.814802 | 1.279781e-51 | -8.615850e-47 |
| Msa0026200 | Msa0379650 | 0.800177 | 1.628688e-48 | -8.615850e-47 |
| Msa0072720 | Msa0379650 | 0.807836 | 4.161044e-50 | -8.615850e-47 |
| Msa0077340 | Msa0379650 | 0.816811 | 4.561194e-52 | -8.615850e-47 |
| Msa0089980 | Msa0379650 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa0090010 | Msa0379650 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
| Msa0093850 | Msa0379650 | 0.812243 | 4.676999e-51 | -8.615850e-47 |
| Msa0120990 | Msa0379650 | 0.811912 | 5.522400e-51 | -8.615850e-47 |
| Msa0138360 | Msa0379650 | 0.804044 | 2.609748e-49 | -8.615850e-47 |
| Msa0141400 | Msa0379650 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0163510 | Msa0379650 | 0.808007 | 3.826196e-50 | -8.615850e-47 |
| Msa0195640 | Msa0379650 | 0.822563 | 2.215925e-53 | -8.615850e-47 |
| Msa0214550 | Msa0379650 | 0.805386 | 1.368512e-49 | -8.615850e-47 |
| Msa0221000 | Msa0379650 | 0.836287 | 1.022083e-56 | -8.615850e-47 |
| Msa0221500 | Msa0379650 | 0.800613 | 1.327667e-48 | -8.615850e-47 |
| Msa0225480 | Msa0379650 | 0.833871 | 4.156551e-56 | -8.615850e-47 |
| Msa0237210 | Msa0379650 | 0.802418 | 5.664506e-49 | -8.615850e-47 |
| Msa0237420 | Msa0379650 | 0.801583 | 8.409861e-49 | -8.615850e-47 |
| Msa0376630 | Msa0379650 | 0.840988 | 6.238954e-58 | -8.615850e-47 |
| Msa0379650 | Msa0405680 | 0.803028 | 4.238275e-49 | -8.615850e-47 |
| Msa0379650 | Msa0406770 | 0.823189 | 1.583930e-53 | -8.615850e-47 |
| Msa0379650 | Msa0428580 | 0.812584 | 3.939166e-51 | -8.615850e-47 |
| Msa0379650 | Msa0428920 | 0.936521 | 1.520908e-97 | -8.615850e-47 |
| Msa0379650 | Msa0468250 | 0.804340 | 2.264614e-49 | -8.615850e-47 |
| Msa0379650 | Msa0468270 | 0.817100 | 3.927804e-52 | -8.615850e-47 |
| Msa0379650 | Msa0471670 | 0.800657 | 1.300256e-48 | -8.615850e-47 |
| Msa0379650 | Msa0474940 | 0.807991 | 3.857017e-50 | -8.615850e-47 |
| Msa0379650 | Msa0479170 | 0.835438 | 1.677903e-56 | -8.615850e-47 |
| Msa0379650 | Msa0479200 | 0.820626 | 6.211428e-53 | -8.615850e-47 |
| Msa0379650 | Msa0527190 | 0.820540 | 6.499174e-53 | -8.615850e-47 |
| Msa0379650 | Msa0529030 | 0.806379 | 8.465105e-50 | -8.615850e-47 |
| Msa0379650 | Msa0574390 | 0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa0379650 | Msa0580370 | 0.800201 | 1.610736e-48 | -8.615850e-47 |
| Msa0379650 | Msa0583360 | -0.800343 | 1.506631e-48 | -8.615850e-47 |
| Msa0379650 | Msa0588090 | 0.807069 | 6.052130e-50 | -8.615850e-47 |
| Msa0379650 | Msa0611210 | 0.818570 | 1.829992e-52 | -8.615850e-47 |
| Msa0379650 | Msa0628420 | 0.808712 | 2.706158e-50 | -8.615850e-47 |
| Msa0379650 | Msa0651550 | 0.827751 | 1.315668e-54 | -8.615850e-47 |
| Msa0379650 | Msa0693330 | 0.805537 | 1.272531e-49 | -8.615850e-47 |
| Msa0379650 | Msa0786750 | 0.803350 | 3.636048e-49 | -8.615850e-47 |
| Msa0379650 | Msa0797930 | 0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa0379650 | Msa0822500 | 0.816246 | 6.103332e-52 | -8.615850e-47 |
| Msa0379650 | Msa0829300 | 0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa0379650 | Msa0833530 | 0.834646 | 2.657557e-56 | -8.615850e-47 |
| Msa0379650 | Msa0894790 | 0.813105 | 3.028253e-51 | -8.615850e-47 |
| Msa0379650 | Msa0945630 | 0.800419 | 1.454179e-48 | -8.615850e-47 |
| Msa0379650 | Msa1029070 | 0.809479 | 1.853815e-50 | -8.615850e-47 |
| Msa0379650 | Msa1047760 | 0.808429 | 3.110731e-50 | -8.615850e-47 |
| Msa0379650 | Msa1050910 | 0.806352 | 8.575688e-50 | -8.615850e-47 |
| Msa0379650 | Msa1050960 | 0.806885 | 6.619214e-50 | -8.615850e-47 |
| Msa0379650 | Msa1089450 | 0.831292 | 1.813224e-55 | -8.615850e-47 |
| Msa0379650 | Msa1132840 | 0.805232 | 1.474680e-49 | -8.615850e-47 |
| Msa0379650 | Msa1145810 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
| Msa0379650 | Msa1173340 | 0.821307 | 4.328633e-53 | -8.615850e-47 |
| Msa0379650 | Msa1179630 | 0.804568 | 2.029895e-49 | -8.615850e-47 |
| Msa0379650 | Msa1205280 | 0.806490 | 8.021334e-50 | -8.615850e-47 |
| Msa0379650 | Msa1218450 | 0.802195 | 6.296322e-49 | -8.615850e-47 |
| Msa0379650 | Msa1228200 | 0.822006 | 2.983860e-53 | -8.615850e-47 |
| Msa0379650 | Msa1232700 | 0.812462 | 4.189001e-51 | -8.615850e-47 |
| Msa0379650 | Msa1276660 | 0.804603 | 1.995799e-49 | -8.615850e-47 |
| Msa0379650 | Msa1297230 | 0.815073 | 1.114242e-51 | -8.615850e-47 |
| Msa0379650 | Msa1307560 | 0.811089 | 8.334353e-51 | -8.615850e-47 |
| Msa0379650 | Msa1341300 | 0.819658 | 1.034432e-52 | -8.615850e-47 |
| Msa0379650 | Msa1343430 | 0.810661 | 1.031873e-50 | -8.615850e-47 |
| Msa0379650 | Msa1345100 | 0.817677 | 2.912575e-52 | -8.615850e-47 |
| Msa0379650 | Msa1347310 | 0.811903 | 5.547582e-51 | -8.615850e-47 |
| Msa0379650 | Msa1371520 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
| Msa0379650 | Msa1371550 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
| Msa0379650 | Msa1393570 | 0.803599 | 3.228040e-49 | -8.615850e-47 |
| Msa0379650 | Msa1405460 | 0.807156 | 5.799477e-50 | -8.615850e-47 |
| Msa0379650 | Msa1414820 | 0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa0379650 | Msa1422590 | 0.818720 | 1.691662e-52 | -8.615850e-47 |
| Msa0379650 | Msa1425880 | 0.903005 | 5.417979e-79 | -8.615850e-47 |
| Msa0379650 | Msa1440310 | 0.825420 | 4.732737e-54 | -8.615850e-47 |
| Msa0379650 | Msa1452710 | 0.810143 | 1.334437e-50 | -8.615850e-47 |
| Msa0240900 | Msa0379650 | 0.846277 | 2.402964e-59 | -8.615850e-47 |
| Msa0267920 | Msa0379650 | 0.826353 | 2.841617e-54 | -8.615850e-47 |
| Msa0274980 | Msa0379650 | 0.830930 | 2.224506e-55 | -8.615850e-47 |
| Msa0279850 | Msa0379650 | 0.824339 | 8.518393e-54 | -8.615850e-47 |
| Msa0300320 | Msa0379650 | 0.823707 | 1.198512e-53 | -8.615850e-47 |
| Msa0315690 | Msa0379650 | 0.816248 | 6.099376e-52 | -8.615850e-47 |
| Msa0317970 | Msa0379650 | 0.827063 | 1.924222e-54 | -8.615850e-47 |
| Msa0321620 | Msa0379650 | 0.839900 | 1.201245e-57 | -8.615850e-47 |
| Msa0322900 | Msa0379650 | 0.806052 | 9.917272e-50 | -8.615850e-47 |
| Msa0337700 | Msa0379650 | 0.831905 | 1.280353e-55 | -8.615850e-47 |
| Msa0341690 | Msa0379650 | 0.832214 | 1.074121e-55 | -8.615850e-47 |
| Msa0358400 | Msa0379650 | 0.807158 | 5.793979e-50 | -8.615850e-47 |
| Msa0360210 | Msa0379650 | 0.819162 | 1.342230e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379650 | MtrunA17_Chr3g0132761 | 98.058 | 309 | 6 | 0 | 119 | 427 | 1 | 309 | 0.0 | 632 |
| Msa0379650 | MtrunA17_Chr5g0427661 | 53.185 | 314 | 94 | 11 | 115 | 414 | 1 | 275 | 8.16e-93 | 281 |
| Msa0379650 | MtrunA17_Chr4g0049741 | 47.012 | 251 | 114 | 8 | 168 | 400 | 20 | 269 | 7.03e-57 | 190 |
| Msa0379650 | MtrunA17_Chr3g0132751 | 54.098 | 183 | 74 | 3 | 189 | 364 | 69 | 248 | 1.21e-56 | 190 |
| Msa0379650 | MtrunA17_Chr4g0002231 | 55.670 | 97 | 29 | 3 | 267 | 352 | 42 | 135 | 2.91e-26 | 103 |
| Msa0379650 | MtrunA17_Chr4g0002261 | 76.471 | 51 | 11 | 1 | 242 | 291 | 16 | 66 | 4.71e-18 | 78.2 |
| Msa0379650 | MtrunA17_Chr1g0212081 | 81.013 | 79 | 11 | 2 | 19 | 94 | 1 | 78 | 3.06e-17 | 82.4 |
| Msa0379650 | MtrunA17_Chr3g0102511 | 40.000 | 90 | 52 | 2 | 274 | 362 | 4 | 92 | 1.77e-13 | 72.0 |
| Msa0379650 | MtrunA17_Chr4g0002251 | 55.556 | 54 | 24 | 0 | 314 | 367 | 5 | 58 | 1.93e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379650 | AT4G24470.1 | 63.021 | 192 | 68 | 3 | 187 | 376 | 81 | 271 | 3.42e-75 | 237 |
| Msa0379650 | AT4G24470.2 | 63.021 | 192 | 68 | 3 | 187 | 376 | 81 | 271 | 3.42e-75 | 237 |
| Msa0379650 | AT4G24470.3 | 66.857 | 175 | 56 | 2 | 187 | 359 | 81 | 255 | 2.03e-74 | 235 |
| Msa0379650 | AT1G51600.1 | 53.586 | 237 | 95 | 4 | 140 | 361 | 30 | 266 | 1.92e-70 | 225 |
| Msa0379650 | AT1G51600.2 | 53.586 | 237 | 95 | 4 | 140 | 361 | 30 | 266 | 1.92e-70 | 225 |
| Msa0379650 | AT3G21175.2 | 52.743 | 237 | 95 | 5 | 136 | 359 | 26 | 258 | 2.65e-68 | 219 |
| Msa0379650 | AT3G21175.1 | 53.086 | 243 | 87 | 8 | 136 | 359 | 26 | 260 | 1.80e-66 | 214 |
| Msa0379650 | AT3G21175.3 | 49.171 | 181 | 74 | 5 | 136 | 304 | 26 | 200 | 2.61e-39 | 140 |
| Msa0379650 | AT2G46670.1 | 39.286 | 112 | 54 | 3 | 191 | 289 | 61 | 171 | 5.02e-11 | 62.0 |
Find 131 sgRNAs with CRISPR-Local
Find 542 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAAAATGTTTATGTTTC+TGG | 0.023502 | 3_1:-80957736 | Msa0379650:CDS |
| TCTTCCGATGATTCCAATTT+TGG | 0.136288 | 3_1:-80958840 | Msa0379650:CDS |
| AAGAAACTGTGAACCAAAAT+TGG | 0.229069 | 3_1:+80958827 | None:intergenic |
| ATCAGGTTAGGGTTTGGATT+AGG | 0.256539 | 3_1:-80957954 | Msa0379650:intron |
| ATTTATACCCTCTGATTTAG+AGG | 0.285177 | 3_1:+80957440 | None:intergenic |
| GTTGGTGATAGTGTAGAATT+TGG | 0.291598 | 3_1:+80957898 | None:intergenic |
| TCAGGTTAGGGTTTGGATTA+GGG | 0.308411 | 3_1:-80957953 | Msa0379650:intron |
| TTAGGGTTTGGATTAGGGTT+AGG | 0.320180 | 3_1:-80957948 | Msa0379650:CDS |
| CATGCATTGCATAGTGTCCT+AGG | 0.346287 | 3_1:+80954089 | None:intergenic |
| CAATCAGTGCTGTTACTGTT+AGG | 0.349587 | 3_1:-80957506 | Msa0379650:CDS |
| GATCTTCGTTGTTCTTGATC+TGG | 0.354455 | 3_1:+80957848 | None:intergenic |
| AAATCCGGGTTCACAATGTT+TGG | 0.357196 | 3_1:-80957471 | Msa0379650:CDS |
| CTATCAATCAGGTTAGGGTT+TGG | 0.357984 | 3_1:-80957960 | Msa0379650:intron |
| AGTGTTGCTAAATATTCAAT+AGG | 0.359134 | 3_1:-80952010 | Msa0379650:three_prime_UTR |
| TCGAAGTGGTAGCACCAGTA+TGG | 0.368974 | 3_1:+80958969 | None:intergenic |
| CAAGGGTTTGTGACTCGAAA+TGG | 0.375722 | 3_1:+80957803 | None:intergenic |
| GTGGAAGAGGGTGCGGTTGG+TGG | 0.375793 | 3_1:+80952562 | None:intergenic |
| TTCATAGAGTTGTACATTGT+TGG | 0.378351 | 3_1:+80957880 | None:intergenic |
| TAGGGTTTGGATTAGGGTTA+GGG | 0.379605 | 3_1:-80957947 | Msa0379650:CDS |
| AATTGTTGAACAGACATATC+AGG | 0.381434 | 3_1:+80957700 | None:intergenic |
| CAGCTCACACTTTCGTTTCG+TGG | 0.383098 | 3_1:-80957664 | Msa0379650:CDS |
| AGGAAATTTGTTTCCCATGA+TGG | 0.397900 | 3_1:-80951985 | Msa0379650:three_prime_UTR |
| AACGAGCAGCGTCCTTGATT+AGG | 0.401134 | 3_1:-80957275 | Msa0379650:CDS |
| AAAATGTTTGACTAGACAAT+TGG | 0.401456 | 3_1:+80952045 | None:intergenic |
| ATGTGATTGTTGTTGTTGTC+AGG | 0.413713 | 3_1:+80957826 | None:intergenic |
| AGGTGGATGTGAATTAAATC+CGG | 0.414699 | 3_1:-80957486 | Msa0379650:CDS |
| ATGCAGGATGCAACGTAGTA+AGG | 0.415365 | 3_1:-80954357 | Msa0379650:intron |
| CGAGTGCCAAAGCCAATGAT+TGG | 0.422904 | 3_1:+80952342 | None:intergenic |
| TGGGGTTCTGATCCAGAGTC+AGG | 0.423406 | 3_1:-80954293 | Msa0379650:CDS |
| CTTTAATTATTGTGAAATTG+TGG | 0.429573 | 3_1:-80952123 | Msa0379650:three_prime_UTR |
| CTGCATAAACTTTCCCATCA+TGG | 0.430606 | 3_1:+80951971 | None:intergenic |
| ATCTATTTAAAATATGCTCC+TGG | 0.432274 | 3_1:-80952245 | Msa0379650:three_prime_UTR |
| GGAAATTTGTTTCCCATGAT+GGG | 0.441686 | 3_1:-80951984 | Msa0379650:three_prime_UTR |
| TGATTCTGTTACCCCTGAAA+AGG | 0.450890 | 3_1:-80957626 | Msa0379650:intron |
| CTTCGCCGGAAGCATCTTCA+AGG | 0.452359 | 3_1:+80957785 | None:intergenic |
| CCGAAACACTACCTCCATAC+TGG | 0.453290 | 3_1:-80958983 | Msa0379650:CDS |
| AGAGAGTGGTGGTTGATTTG+TGG | 0.461256 | 3_1:+80959059 | None:intergenic |
| TGCATAAACTTTCCCATCAT+GGG | 0.463684 | 3_1:+80951972 | None:intergenic |
| ACCTGCTCAGGTTGTGGAAG+AGG | 0.464674 | 3_1:+80952549 | None:intergenic |
| CAAACCCTTGAAGATGCTTC+CGG | 0.470159 | 3_1:-80957790 | Msa0379650:CDS |
| CAAATTTATTGTAATTCCAA+TGG | 0.470643 | 3_1:-80952319 | Msa0379650:three_prime_UTR |
| TGCGGCTGACTACATCTTGT+AGG | 0.472012 | 3_1:+80957297 | None:intergenic |
| CAACATAAGCATACCTGCTC+AGG | 0.473278 | 3_1:+80952537 | None:intergenic |
| ACCACATCTTGCCCTGACTC+TGG | 0.474085 | 3_1:+80954281 | None:intergenic |
| AAGCATACCTGCTCAGGTTG+TGG | 0.481299 | 3_1:+80952543 | None:intergenic |
| CTGAGACGGTGTTTCTGAAA+TGG | 0.483802 | 3_1:+80959028 | None:intergenic |
| GAAGGTGAGCGGGAGTGAGA+AGG | 0.483996 | 3_1:+80958867 | None:intergenic |
| CTTGAAGATGCTTCCGGCGA+AGG | 0.485541 | 3_1:-80957784 | Msa0379650:CDS |
| TTTGAATTAGCTGTTTATCT+CGG | 0.487286 | 3_1:-80952218 | Msa0379650:three_prime_UTR |
| CCCTCTTCCACAACCTGAGC+AGG | 0.488271 | 3_1:-80952550 | Msa0379650:intron |
| TTGGTGATAGTGTAGAATTT+GGG | 0.488288 | 3_1:+80957899 | None:intergenic |
| TACTCTTGCGTCACCTGAGC+AGG | 0.489078 | 3_1:-80952704 | Msa0379650:intron |
| TTTAATTATTGTGAAATTGT+GGG | 0.491589 | 3_1:-80952122 | Msa0379650:three_prime_UTR |
| ACAAGATGGAGGTAACAGTT+GGG | 0.494657 | 3_1:-80954312 | Msa0379650:CDS |
| TTCGTTGTTCTTGATCTGGT+CGG | 0.496317 | 3_1:+80957852 | None:intergenic |
| TAGTGTTTCGGTGGTGGTGA+TGG | 0.500058 | 3_1:+80958995 | None:intergenic |
| AATGTTTATGTTTCTGGCGA+TGG | 0.501439 | 3_1:-80957730 | Msa0379650:CDS |
| GAATGACAGCATACCTGCTC+AGG | 0.503321 | 3_1:+80952691 | None:intergenic |
| TGAGCGGGAGTGAGAAGGTG+TGG | 0.503856 | 3_1:+80958872 | None:intergenic |
| GGAAGAGGAAGAAGGTGAGC+GGG | 0.505581 | 3_1:+80958857 | None:intergenic |
| GGTGGATGTGAATTAAATCC+GGG | 0.508148 | 3_1:-80957485 | Msa0379650:CDS |
| TCGGTGGTGGTGATGGTAAG+TGG | 0.509546 | 3_1:+80959002 | None:intergenic |
| TGGAGGTAGTGTTTCGGTGG+TGG | 0.515217 | 3_1:+80958989 | None:intergenic |
| AAAAGCAACTTTCCCATGGT+GGG | 0.521121 | 3_1:+80952074 | None:intergenic |
| CGGAAGAGGAAGAAGGTGAG+CGG | 0.536293 | 3_1:+80958856 | None:intergenic |
| GTTGTGGAAGAGGGTGCGGT+TGG | 0.536534 | 3_1:+80952559 | None:intergenic |
| ACAGCTAATTCAAATAATCC+AGG | 0.536845 | 3_1:+80952227 | None:intergenic |
| CAGAATCAAAGACATAAACT+TGG | 0.537080 | 3_1:+80957641 | None:intergenic |
| AAAATTGGAATCATCGGAAG+AGG | 0.537469 | 3_1:+80958842 | None:intergenic |
| TGAACCAAAATTGGAATCAT+CGG | 0.538695 | 3_1:+80958836 | None:intergenic |
| TTATCTCGGAATGTATAAAG+TGG | 0.539874 | 3_1:-80952204 | Msa0379650:three_prime_UTR |
| TGCAGGATGCAACGTAGTAA+GGG | 0.540856 | 3_1:-80954356 | Msa0379650:intron |
| TGATTAGGTTTCGTCAGAAG+AGG | 0.541643 | 3_1:-80957260 | Msa0379650:CDS |
| ATTCTATCAGTCGAATCCAT+TGG | 0.545596 | 3_1:+80952303 | None:intergenic |
| AACAAGATGGAGGTAACAGT+TGG | 0.546569 | 3_1:-80954313 | Msa0379650:CDS |
| CCAGTATGGAGGTAGTGTTT+CGG | 0.554080 | 3_1:+80958983 | None:intergenic |
| GATTTGACCTTCACCTTCGC+CGG | 0.560805 | 3_1:+80957771 | None:intergenic |
| GAGCGGGAGTGAGAAGGTGT+GGG | 0.563699 | 3_1:+80958873 | None:intergenic |
| ATGGTAAGTGGTGGCTGAGA+CGG | 0.564915 | 3_1:+80959014 | None:intergenic |
| TTTGATGATCAGGTCGGTGA+GGG | 0.566915 | 3_1:-80952452 | Msa0379650:intron |
| CCTGCTCAGGTTGTGGAAGA+GGG | 0.568795 | 3_1:+80952550 | None:intergenic |
| GATGCTTCCGGCGAAGGTGA+AGG | 0.572469 | 3_1:-80957778 | Msa0379650:CDS |
| GAATCATCGGAAGAGGAAGA+AGG | 0.575477 | 3_1:+80958849 | None:intergenic |
| GTGTCCAAACATTGTGAACC+CGG | 0.578316 | 3_1:+80957467 | None:intergenic |
| GGTAATGAGGACTTGAACTG+TGG | 0.578555 | 3_1:-80952431 | Msa0379650:CDS |
| ATCTACCCCTATGATGCGAA+GGG | 0.578843 | 3_1:-80954123 | Msa0379650:CDS |
| TCAACAGATTCGTTATGCGC+AGG | 0.581536 | 3_1:+80952401 | None:intergenic |
| ACATCAGCTAAGAAACAAGA+TGG | 0.581906 | 3_1:-80954326 | Msa0379650:CDS |
| AATCTACCCCTATGATGCGA+AGG | 0.583232 | 3_1:-80954124 | Msa0379650:CDS |
| CACGAAACGAAAGTGTGAGC+TGG | 0.585055 | 3_1:+80957665 | None:intergenic |
| TGAGGGATCTATCTACTGCT+AGG | 0.587426 | 3_1:-80952744 | Msa0379650:CDS |
| TGCTAAATATTCAATAGGAA+AGG | 0.587518 | 3_1:-80952005 | Msa0379650:three_prime_UTR |
| TGCGTCAAGAAGTTGCACTA+AGG | 0.587793 | 3_1:-80957200 | Msa0379650:intron |
| CTTCTGACGAAACCTAATCA+AGG | 0.594819 | 3_1:+80957263 | None:intergenic |
| TCAGGTCGGTGAGGGTAATG+AGG | 0.596734 | 3_1:-80952444 | Msa0379650:intron |
| AGGACACTATGCAATGCATG+TGG | 0.601058 | 3_1:-80954086 | Msa0379650:CDS |
| ATTGTTGAACAGACATATCA+GGG | 0.601227 | 3_1:+80957701 | None:intergenic |
| TTCGCCGGAAGCATCTTCAA+GGG | 0.605756 | 3_1:+80957786 | None:intergenic |
| TGATTGGAAAACTCATTGAT+CGG | 0.607060 | 3_1:+80952358 | None:intergenic |
| ATCAAGGACGCTGCTCGTTG+CGG | 0.607227 | 3_1:+80957279 | None:intergenic |
| ATGCATTGCATAGTGTCCTA+GGG | 0.607432 | 3_1:+80954090 | None:intergenic |
| TCAGGTTGTGGAAGAGGGTG+CGG | 0.608180 | 3_1:+80952555 | None:intergenic |
| CATAGTGTCCTAGGGCCAGA+CGG | 0.626210 | 3_1:+80954098 | None:intergenic |
| GGGGTTCTGATCCAGAGTCA+GGG | 0.627539 | 3_1:-80954292 | Msa0379650:CDS |
| ACACATCGCCTCTAAATCAG+AGG | 0.633670 | 3_1:-80957448 | Msa0379650:CDS |
| AAATGGTGCGGCGGAGAGAG+TGG | 0.633873 | 3_1:+80959045 | None:intergenic |
| CAAGATGGAGGTAACAGTTG+GGG | 0.641381 | 3_1:-80954311 | Msa0379650:CDS |
| GTAATGAGGACTTGAACTGT+GGG | 0.641626 | 3_1:-80952430 | Msa0379650:CDS |
| ATTTGATGATCAGGTCGGTG+AGG | 0.643120 | 3_1:-80952453 | Msa0379650:intron |
| AATTATTGTGAAATTGTGGG+TGG | 0.644152 | 3_1:-80952119 | Msa0379650:three_prime_UTR |
| GTATGGAGGTAGTGTTTCGG+TGG | 0.646598 | 3_1:+80958986 | None:intergenic |
| TCCAGAGTCAGGGCAAGATG+TGG | 0.649132 | 3_1:-80954282 | Msa0379650:CDS |
| AATCGCCGCAGATGAGGTCG+TGG | 0.651671 | 3_1:+80958922 | None:intergenic |
| CTACCCCTATGATGCGAAGG+GGG | 0.652912 | 3_1:-80954121 | Msa0379650:CDS |
| CACATCGCCTCTAAATCAGA+GGG | 0.653063 | 3_1:-80957447 | Msa0379650:intron |
| AAGTGGTAGCACCAGTATGG+AGG | 0.653261 | 3_1:+80958972 | None:intergenic |
| TAGAATGTACAGCTCTAGAG+AGG | 0.653594 | 3_1:-80952286 | Msa0379650:three_prime_UTR |
| TCAGTGCTGTTACTGTTAGG+TGG | 0.658523 | 3_1:-80957503 | Msa0379650:CDS |
| ATGGTGGGAAAATCTGTCTG+AGG | 0.659426 | 3_1:+80952089 | None:intergenic |
| GGACACTATGCAATGCATGT+GGG | 0.666836 | 3_1:-80954085 | Msa0379650:CDS |
| TGGTGCGGCGGAGAGAGTGG+TGG | 0.669951 | 3_1:+80959048 | None:intergenic |
| GTGTTTCTGAAATGGTGCGG+CGG | 0.681947 | 3_1:+80959036 | None:intergenic |
| TCTACCCCTATGATGCGAAG+GGG | 0.692075 | 3_1:-80954122 | Msa0379650:CDS |
| TCAGCTAAGAAACAAGATGG+AGG | 0.698334 | 3_1:-80954323 | Msa0379650:CDS |
| GAGGTCGTGGAGATTCGTGA+CGG | 0.703256 | 3_1:+80958935 | None:intergenic |
| TGTTGATGATAAAACAGCTG+TGG | 0.705190 | 3_1:-80952384 | Msa0379650:CDS |
| GTGGTGGTGATGGTAAGTGG+TGG | 0.706112 | 3_1:+80959005 | None:intergenic |
| ACGGTGTTTCTGAAATGGTG+CGG | 0.714185 | 3_1:+80959033 | None:intergenic |
| AATCTCCACGACCTCATCTG+CGG | 0.729792 | 3_1:-80958927 | Msa0379650:CDS |
| GTTGAACAGACATATCAGGG+TGG | 0.749016 | 3_1:+80957704 | None:intergenic |
| TTGTACAGATGCACACACTG+TGG | 0.786983 | 3_1:-80954158 | Msa0379650:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTTAAATTATT+TGG | - | chr3_1:80953702-80953721 | Msa0379650:intron | 0.0% |
| !!! | TTTATTTTTTTAAATTATTT+GGG | - | chr3_1:80953703-80953722 | Msa0379650:intron | 0.0% |
| !!! | TTTATTTTATATTATTATTT+GGG | + | chr3_1:80954919-80954938 | None:intergenic | 0.0% |
| !!! | ATTTATTTTATATTATTATT+TGG | + | chr3_1:80954920-80954939 | None:intergenic | 0.0% |
| !!! | ATATTAATTGATGATTATAA+AGG | - | chr3_1:80952289-80952308 | Msa0379650:three_prime_UTR | 10.0% |
| !!! | AACTAATTTTTTTTTAAGTT+TGG | + | chr3_1:80952832-80952851 | None:intergenic | 10.0% |
| !! | AAACTAATTAAAATTGAAAA+GGG | + | chr3_1:80953474-80953493 | None:intergenic | 10.0% |
| !! | ATATATTATTGAATATTGAT+TGG | - | chr3_1:80954082-80954101 | Msa0379650:CDS | 10.0% |
| !! | TTTAAAAATAGAAAAGAAAT+AGG | + | chr3_1:80956672-80956691 | None:intergenic | 10.0% |
| !!! | AATTTGGATTTTTTTTAAAC+CGG | + | chr3_1:80952528-80952547 | None:intergenic | 15.0% |
| !! | AACTAATTAAAATTGAAAAG+GGG | + | chr3_1:80953473-80953492 | None:intergenic | 15.0% |
| !! | GAAACTAATTAAAATTGAAA+AGG | + | chr3_1:80953475-80953494 | None:intergenic | 15.0% |
| !! | TCTATTACTTACAATTAAAA+TGG | + | chr3_1:80954004-80954023 | None:intergenic | 15.0% |
| !! | AAGGAAAAAAATTAGAAAAA+CGG | + | chr3_1:80954293-80954312 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTACCTTTTAAC+CGG | + | chr3_1:80954978-80954997 | None:intergenic | 15.0% |
| !! | AAAGGTAAAAATTAAAAAAG+TGG | - | chr3_1:80954982-80955001 | Msa0379650:intron | 15.0% |
| !! | AAGGTAAAAATTAAAAAAGT+GGG | - | chr3_1:80954983-80955002 | Msa0379650:intron | 15.0% |
| !! | ATATATGTGTACATAAAAAT+AGG | + | chr3_1:80955580-80955599 | None:intergenic | 15.0% |
| !! | TTAAATTATTATGAAGTAAC+AGG | + | chr3_1:80956591-80956610 | None:intergenic | 15.0% |
| !!! | AAAACAGAATTTTTAATTGT+TGG | - | chr3_1:80957376-80957395 | Msa0379650:intron | 15.0% |
| !!! | TGAATTTTAAGTAATGTTTA+AGG | - | chr3_1:80958001-80958020 | Msa0379650:intron | 15.0% |
| !! | TTTAATTATTGTGAAATTGT+GGG | - | chr3_1:80958927-80958946 | Msa0379650:CDS | 15.0% |
| !! | TAATATATCAAAGCCATTAA+TGG | + | chr3_1:80952275-80952294 | None:intergenic | 20.0% |
| !!! | TAATTGATGATTATAAAGGA+AGG | - | chr3_1:80952293-80952312 | Msa0379650:three_prime_UTR | 20.0% |
| !!! | AATTGATGATTATAAAGGAA+GGG | - | chr3_1:80952294-80952313 | Msa0379650:three_prime_UTR | 20.0% |
| !! | ACAAAAAAAAAAGTGAATAC+TGG | - | chr3_1:80952439-80952458 | Msa0379650:CDS | 20.0% |
| !!! | GATTTTTTTTGTTTTGTTAC+AGG | - | chr3_1:80953518-80953537 | Msa0379650:intron | 20.0% |
| !!! | TTATTGAATATTGATTGGTA+TGG | - | chr3_1:80954087-80954106 | Msa0379650:CDS | 20.0% |
| !!! | AATGTTAATTGAAGTTTTGT+CGG | - | chr3_1:80954195-80954214 | Msa0379650:intron | 20.0% |
| !! | AGGAAAAAAATTAGAAAAAC+GGG | + | chr3_1:80954292-80954311 | None:intergenic | 20.0% |
| !! | CAATTAAATTTATTCCTTAC+TGG | + | chr3_1:80954464-80954483 | None:intergenic | 20.0% |
| !! | CAGTAAGGAATAAATTTAAT+TGG | - | chr3_1:80954462-80954481 | Msa0379650:intron | 20.0% |
| !!! | ATGATAACTTGATACAATTT+TGG | + | chr3_1:80954601-80954620 | None:intergenic | 20.0% |
| !!! | AAGTTTTGTAATTAGTACAA+GGG | - | chr3_1:80954650-80954669 | Msa0379650:intron | 20.0% |
| !! | ATTAATTGAAGTGTGTTTAA+TGG | - | chr3_1:80955019-80955038 | Msa0379650:intron | 20.0% |
| !! | TATTCTATGACATGATTAAA+GGG | - | chr3_1:80955144-80955163 | Msa0379650:intron | 20.0% |
| !! | TGAATCTAATATGATATGAT+AGG | - | chr3_1:80955601-80955620 | Msa0379650:intron | 20.0% |
| !!! | AAAAACAACAAATTTTGAGA+GGG | + | chr3_1:80955856-80955875 | None:intergenic | 20.0% |
| !!! | AAAAAACAACAAATTTTGAG+AGG | + | chr3_1:80955857-80955876 | None:intergenic | 20.0% |
| !!! | TATTTCACATATAGCATTTT+TGG | - | chr3_1:80956067-80956086 | Msa0379650:intron | 20.0% |
| !!! | ATTTCACATATAGCATTTTT+GGG | - | chr3_1:80956068-80956087 | Msa0379650:intron | 20.0% |
| !! | ATACAAAAATAATGTGGTTA+AGG | + | chr3_1:80956126-80956145 | None:intergenic | 20.0% |
| !! | ATGGAAATACAAAAATAATG+TGG | + | chr3_1:80956132-80956151 | None:intergenic | 20.0% |
| !!! | AGTCACTTTGTATTTAATTA+AGG | + | chr3_1:80956257-80956276 | None:intergenic | 20.0% |
| !!! | TCACTTTTTCAAAAGTTTAT+TGG | - | chr3_1:80956450-80956469 | Msa0379650:intron | 20.0% |
| !! | AAATAGAAAAGAAATAGGTA+AGG | + | chr3_1:80956667-80956686 | None:intergenic | 20.0% |
| !!! | CTTTTCTATTTTTAAAATGC+AGG | - | chr3_1:80956676-80956695 | Msa0379650:intron | 20.0% |
| !!! | TATCAAACACAATGATTTTA+GGG | + | chr3_1:80957485-80957504 | None:intergenic | 20.0% |
| !!! | ATATCAAACACAATGATTTT+AGG | + | chr3_1:80957486-80957505 | None:intergenic | 20.0% |
| !!! | TTAACTATTTTCTTCATGAA+TGG | - | chr3_1:80957538-80957557 | Msa0379650:intron | 20.0% |
| !!! | ATTACTTTAAACGGTTTTAA+GGG | - | chr3_1:80957947-80957966 | Msa0379650:CDS | 20.0% |
| !!! | GTATTTCTTTTTGAACAATA+TGG | - | chr3_1:80958031-80958050 | Msa0379650:intron | 20.0% |
| !! | TGATCATCAAATGTAAATAT+TGG | + | chr3_1:80958588-80958607 | None:intergenic | 20.0% |
| !!! | AATATTTACATTTGATGATC+AGG | - | chr3_1:80958587-80958606 | Msa0379650:intron | 20.0% |
| !! | CAAATTTATTGTAATTCCAA+TGG | - | chr3_1:80958730-80958749 | Msa0379650:intron | 20.0% |
| !!! | TGACTTAATTTAGTTTTCAT+TGG | - | chr3_1:80958879-80958898 | Msa0379650:CDS | 20.0% |
| !!! | GACTTAATTTAGTTTTCATT+GGG | - | chr3_1:80958880-80958899 | Msa0379650:CDS | 20.0% |
| !! | CTTTAATTATTGTGAAATTG+TGG | - | chr3_1:80958926-80958945 | Msa0379650:CDS | 20.0% |
| !! | GGATGATTATCATTCTTTTA+TGG | + | chr3_1:80952254-80952273 | None:intergenic | 25.0% |
| ! | GAATGATAATCATCCATTAA+TGG | - | chr3_1:80952259-80952278 | Msa0379650:three_prime_UTR | 25.0% |
| ! | AGTGAAATTAGTTGCAAAAA+TGG | - | chr3_1:80952369-80952388 | Msa0379650:exon | 25.0% |
| ! | AAAAATGGAGATTGGATTTA+TGG | - | chr3_1:80952384-80952403 | Msa0379650:CDS | 25.0% |
| ! | ATCTACTTTCACAAACAATT+TGG | + | chr3_1:80952544-80952563 | None:intergenic | 25.0% |
| ! | TTAGATTTATGGTTACAGTT+TGG | + | chr3_1:80952574-80952593 | None:intergenic | 25.0% |
| ! | CTGTAACCATAAATCTAATA+TGG | - | chr3_1:80952576-80952595 | Msa0379650:CDS | 25.0% |
| ! | ACTGATCCATATTAGATTTA+TGG | + | chr3_1:80952585-80952604 | None:intergenic | 25.0% |
| ! | AAATCTAATATGGATCAGTT+TGG | - | chr3_1:80952586-80952605 | Msa0379650:CDS | 25.0% |
| ! | ACTATCTTTCCAAATAAAAC+CGG | + | chr3_1:80952652-80952671 | None:intergenic | 25.0% |
| ! | AAAATTAGTTCAGTTTAGCT+TGG | - | chr3_1:80952842-80952861 | Msa0379650:intron | 25.0% |
| ! | GAAAAATAGTACAATGTAAG+AGG | + | chr3_1:80952897-80952916 | None:intergenic | 25.0% |
| ! | CTTGAAAATGTTTATGTTTC+TGG | - | chr3_1:80953313-80953332 | Msa0379650:intron | 25.0% |
| ! | TGAAAAGGGGAAAATAAAAA+GGG | + | chr3_1:80953460-80953479 | None:intergenic | 25.0% |
| ! | TTGAAAAGGGGAAAATAAAA+AGG | + | chr3_1:80953461-80953480 | None:intergenic | 25.0% |
| !!! | CTAATTTTTTTCCTTCTAAC+CGG | - | chr3_1:80954298-80954317 | Msa0379650:CDS | 25.0% |
| ! | AGCAATGCTCTATTATTATT+TGG | - | chr3_1:80954532-80954551 | Msa0379650:intron | 25.0% |
| ! | GCAATGCTCTATTATTATTT+GGG | - | chr3_1:80954533-80954552 | Msa0379650:intron | 25.0% |
| !!! | TTGATACAATTTTGGTCTTT+TGG | + | chr3_1:80954593-80954612 | None:intergenic | 25.0% |
| !!! | GAAGTTTTGTAATTAGTACA+AGG | - | chr3_1:80954649-80954668 | Msa0379650:intron | 25.0% |
| ! | AACAAAAAGAAAACTGTATG+AGG | + | chr3_1:80954834-80954853 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGATAGATACC+TGG | - | chr3_1:80954848-80954867 | Msa0379650:intron | 25.0% |
| ! | GTAAAAATTAAAAAAGTGGG+TGG | - | chr3_1:80954986-80955005 | Msa0379650:intron | 25.0% |
| ! | CTATTCTATGACATGATTAA+AGG | - | chr3_1:80955143-80955162 | Msa0379650:intron | 25.0% |
| ! | ATTCTATGACATGATTAAAG+GGG | - | chr3_1:80955145-80955164 | Msa0379650:intron | 25.0% |
| !! | TAGATTCCTTCAACAATTTT+GGG | + | chr3_1:80955248-80955267 | None:intergenic | 25.0% |
| !! | ATAGATTCCTTCAACAATTT+TGG | + | chr3_1:80955249-80955268 | None:intergenic | 25.0% |
| ! | AAGAATATTGTTGAATCTTG+TGG | - | chr3_1:80955346-80955365 | Msa0379650:intron | 25.0% |
| ! | AGAATATTGTTGAATCTTGT+GGG | - | chr3_1:80955347-80955366 | Msa0379650:intron | 25.0% |
| ! | ACTCATTGAAAGAAATACAA+GGG | + | chr3_1:80955503-80955522 | None:intergenic | 25.0% |
| !!! | CACAAAGCTATTTTCAAAAT+CGG | - | chr3_1:80955529-80955548 | Msa0379650:intron | 25.0% |
| ! | GATATGATAGGCAAAAATTA+AGG | - | chr3_1:80955613-80955632 | Msa0379650:intron | 25.0% |
| ! | AAGCCATTAGGATATTAATT+AGG | - | chr3_1:80955982-80956001 | Msa0379650:intron | 25.0% |
| ! | ACACCTAATTAATATCCTAA+TGG | + | chr3_1:80955988-80956007 | None:intergenic | 25.0% |
| ! | GCTATATGTGAAATAGTAAA+TGG | + | chr3_1:80956062-80956081 | None:intergenic | 25.0% |
| !! | TTTCACATATAGCATTTTTG+GGG | - | chr3_1:80956069-80956088 | Msa0379650:intron | 25.0% |
| !! | TATTTCCATGTTTCTGATTT+AGG | - | chr3_1:80956143-80956162 | Msa0379650:intron | 25.0% |
| ! | GACAAATATTTGCCATAATA+AGG | - | chr3_1:80956167-80956186 | Msa0379650:intron | 25.0% |
| ! | TTGTTGTCTTAACCTTATTA+TGG | + | chr3_1:80956182-80956201 | None:intergenic | 25.0% |
| ! | ATATAATCTTTCATTCAAGC+AGG | + | chr3_1:80956358-80956377 | None:intergenic | 25.0% |
| !! | ATTTGGATTGTATTGACAAA+TGG | - | chr3_1:80956550-80956569 | Msa0379650:intron | 25.0% |
| !!! | GTAAGTTTTTGACTGAATAT+GGG | - | chr3_1:80956806-80956825 | Msa0379650:intron | 25.0% |
| !!! | ATCATCCATATGTTTTGTTT+TGG | - | chr3_1:80957015-80957034 | Msa0379650:intron | 25.0% |
| !!! | TCATCCATATGTTTTGTTTT+GGG | - | chr3_1:80957016-80957035 | Msa0379650:intron | 25.0% |
| ! | TTCACTTCGTTATTAAAGAA+TGG | - | chr3_1:80957161-80957180 | Msa0379650:intron | 25.0% |
| ! | TTCCAATAAAATGAAAGAAC+AGG | + | chr3_1:80957352-80957371 | None:intergenic | 25.0% |
| ! | AAATTGAGTGACTTTATGAA+GGG | - | chr3_1:80957607-80957626 | Msa0379650:intron | 25.0% |
| !! | GTTTTGCACATTACTTTAAA+CGG | - | chr3_1:80957938-80957957 | Msa0379650:CDS | 25.0% |
| !! | CATTACTTTAAACGGTTTTA+AGG | - | chr3_1:80957946-80957965 | Msa0379650:CDS | 25.0% |
| !! | TTCTGACATTGAAATTTTGT+AGG | - | chr3_1:80958276-80958295 | Msa0379650:intron | 25.0% |
| !! | TCTGACATTGAAATTTTGTA+GGG | - | chr3_1:80958277-80958296 | Msa0379650:intron | 25.0% |
| !! | ATCTATTTAAAATATGCTCC+TGG | - | chr3_1:80958804-80958823 | Msa0379650:intron | 25.0% |
| ! | TTTGAATTAGCTGTTTATCT+CGG | - | chr3_1:80958831-80958850 | Msa0379650:CDS | 25.0% |
| !!! | TTAATTTAGTTTTCATTGGG+TGG | - | chr3_1:80958883-80958902 | Msa0379650:CDS | 25.0% |
| ! | AAAATGTTTGACTAGACAAT+TGG | + | chr3_1:80959007-80959026 | None:intergenic | 25.0% |
| !! | AGTGTTGCTAAATATTCAAT+AGG | - | chr3_1:80959039-80959058 | Msa0379650:CDS | 25.0% |
| ! | TGCTAAATATTCAATAGGAA+AGG | - | chr3_1:80959044-80959063 | Msa0379650:CDS | 25.0% |
| TGAACCAAAATTGGAATCAT+CGG | + | chr3_1:80952216-80952235 | None:intergenic | 30.0% | |
| AAGAAACTGTGAACCAAAAT+TGG | + | chr3_1:80952225-80952244 | None:intergenic | 30.0% | |
| TTAGTTGCAAAAATGGAGAT+TGG | - | chr3_1:80952376-80952395 | Msa0379650:CDS | 30.0% | |
| !! | AAAAAAGTGAATACTGGTTC+AGG | - | chr3_1:80952445-80952464 | Msa0379650:intron | 30.0% |
| !! | AAATGTCATCGACTTGATTT+AGG | + | chr3_1:80952728-80952747 | None:intergenic | 30.0% |
| ! | CAAGGTTCGTTATTTCAATT+CGG | - | chr3_1:80952798-80952817 | Msa0379650:intron | 30.0% |
| CATCATAAGATCAAAAAAGC+TGG | - | chr3_1:80952921-80952940 | Msa0379650:intron | 30.0% | |
| ! | TTGGTGATAGTGTAGAATTT+GGG | + | chr3_1:80953153-80953172 | None:intergenic | 30.0% |
| TTCATAGAGTTGTACATTGT+TGG | + | chr3_1:80953172-80953191 | None:intergenic | 30.0% | |
| ATTGTTGAACAGACATATCA+GGG | + | chr3_1:80953351-80953370 | None:intergenic | 30.0% | |
| AATTGTTGAACAGACATATC+AGG | + | chr3_1:80953352-80953371 | None:intergenic | 30.0% | |
| CAGAATCAAAGACATAAACT+TGG | + | chr3_1:80953411-80953430 | None:intergenic | 30.0% | |
| ! | GAAAAATTGAACCTTTTCAG+GGG | + | chr3_1:80953437-80953456 | None:intergenic | 30.0% |
| ! | GGAAAAATTGAACCTTTTCA+GGG | + | chr3_1:80953438-80953457 | None:intergenic | 30.0% |
| GAAAAGGGGAAAATAAAAAG+GGG | + | chr3_1:80953459-80953478 | None:intergenic | 30.0% | |
| TCAATCTTTCACAATTCACA+AGG | + | chr3_1:80953500-80953519 | None:intergenic | 30.0% | |
| ATTTATACCCTCTGATTTAG+AGG | + | chr3_1:80953612-80953631 | None:intergenic | 30.0% | |
| !!! | ATGATCTTTTTTGCACATGA+TGG | - | chr3_1:80953951-80953970 | Msa0379650:intron | 30.0% |
| !! | TTAATTGAAGTTTTGTCGGA+AGG | - | chr3_1:80954199-80954218 | Msa0379650:intron | 30.0% |
| !! | TAATTGAAGTTTTGTCGGAA+GGG | - | chr3_1:80954200-80954219 | Msa0379650:intron | 30.0% |
| ATATTTCCTAAACTATACCG+AGG | - | chr3_1:80954424-80954443 | Msa0379650:intron | 30.0% | |
| TATTCCTTACTGGAAAACAT+GGG | + | chr3_1:80954454-80954473 | None:intergenic | 30.0% | |
| TTATTCCTTACTGGAAAACA+TGG | + | chr3_1:80954455-80954474 | None:intergenic | 30.0% | |
| !! | ATACAATTTTGGTCTTTTGG+AGG | + | chr3_1:80954590-80954609 | None:intergenic | 30.0% |
| ! | AATTAGTACAAGGGTACAAT+TGG | - | chr3_1:80954659-80954678 | Msa0379650:intron | 30.0% |
| AATGTGATCCTTGTATTGAA+CGG | + | chr3_1:80955209-80955228 | None:intergenic | 30.0% | |
| AAATGTCCCAAAATTGTTGA+AGG | - | chr3_1:80955239-80955258 | Msa0379650:intron | 30.0% | |
| CTAGAAAAAATACTGCTTCA+AGG | + | chr3_1:80955436-80955455 | None:intergenic | 30.0% | |
| !!! | CTTGAAGCAGTATTTTTTCT+AGG | - | chr3_1:80955434-80955453 | Msa0379650:intron | 30.0% |
| CACTCATTGAAAGAAATACA+AGG | + | chr3_1:80955504-80955523 | None:intergenic | 30.0% | |
| ! | TCGGATGATAGAAAAGATTT+TGG | - | chr3_1:80955548-80955567 | Msa0379650:intron | 30.0% |
| ! | TACAAAGGTTTAAAGCCATT+AGG | - | chr3_1:80955970-80955989 | Msa0379650:intron | 30.0% |
| !! | TTCACATATAGCATTTTTGG+GGG | - | chr3_1:80956070-80956089 | Msa0379650:intron | 30.0% |
| !! | CATTAGCTCTTACATGTTTT+TGG | - | chr3_1:80956203-80956222 | Msa0379650:intron | 30.0% |
| ATATTCCGTACTTTGTGATT+TGG | - | chr3_1:80956374-80956393 | Msa0379650:intron | 30.0% | |
| AAGAACCAAATCACAAAGTA+CGG | + | chr3_1:80956382-80956401 | None:intergenic | 30.0% | |
| !! | TACTTTGTGATTTGGTTCTT+TGG | - | chr3_1:80956382-80956401 | Msa0379650:intron | 30.0% |
| ! | ATTGGGATGTTCTAGTTATT+TGG | - | chr3_1:80956533-80956552 | Msa0379650:intron | 30.0% |
| ATGGCGATAATAAAAATTGC+AGG | + | chr3_1:80956617-80956636 | None:intergenic | 30.0% | |
| AATTTGAACAGCTACATTGA+TGG | + | chr3_1:80956636-80956655 | None:intergenic | 30.0% | |
| !! | CGTAAGTTTTTGACTGAATA+TGG | - | chr3_1:80956805-80956824 | Msa0379650:intron | 30.0% |
| GGAGATAGTAAAACATCTAA+CGG | + | chr3_1:80956858-80956877 | None:intergenic | 30.0% | |
| TACTATCTCCTTGATTTACA+TGG | - | chr3_1:80956868-80956887 | Msa0379650:intron | 30.0% | |
| TCTACCCAAAACAAAACATA+TGG | + | chr3_1:80957023-80957042 | None:intergenic | 30.0% | |
| ! | CACCTGTTCTTTCATTTTAT+TGG | - | chr3_1:80957347-80957366 | Msa0379650:intron | 30.0% |
| ! | TTTAATTGTTGGTTGAGAGT+TGG | - | chr3_1:80957387-80957406 | Msa0379650:intron | 30.0% |
| GAAATTGAGTGACTTTATGA+AGG | - | chr3_1:80957606-80957625 | Msa0379650:intron | 30.0% | |
| ACTTTATGAAGGGAAAGTTA+TGG | - | chr3_1:80957617-80957636 | Msa0379650:intron | 30.0% | |
| ! | TGGTGACTTAAGTGTATTTT+AGG | - | chr3_1:80957637-80957656 | Msa0379650:CDS | 30.0% |
| ! | GGTGACTTAAGTGTATTTTA+GGG | - | chr3_1:80957638-80957657 | Msa0379650:CDS | 30.0% |
| TTGAAACTATGTTGTCAAAG+CGG | + | chr3_1:80958152-80958171 | None:intergenic | 30.0% | |
| ATAGTTTCAAAGCATGTCAA+GGG | - | chr3_1:80958162-80958181 | Msa0379650:intron | 30.0% | |
| !! | AATTAGAATCATTGGCTTCA+CGG | + | chr3_1:80958233-80958252 | None:intergenic | 30.0% |
| AGATCCACAATTAGAATCAT+TGG | + | chr3_1:80958241-80958260 | None:intergenic | 30.0% | |
| AATTTCAATGTCAGAATGTG+CGG | + | chr3_1:80958272-80958291 | None:intergenic | 30.0% | |
| !! | AAATTTTGTAGGGTACTTTG+AGG | - | chr3_1:80958287-80958306 | Msa0379650:intron | 30.0% |
| !! | AATTTTGTAGGGTACTTTGA+GGG | - | chr3_1:80958288-80958307 | Msa0379650:intron | 30.0% |
| !! | TATGCTTATGTTGACTTCAT+TGG | - | chr3_1:80958522-80958541 | Msa0379650:intron | 30.0% |
| !! | ATGCTTATGTTGACTTCATT+GGG | - | chr3_1:80958523-80958542 | Msa0379650:intron | 30.0% |
| ! | TTTACATTTGATGATCAGGT+CGG | - | chr3_1:80958591-80958610 | Msa0379650:intron | 30.0% |
| TGATTGGAAAACTCATTGAT+CGG | + | chr3_1:80958694-80958713 | None:intergenic | 30.0% | |
| ! | TCAATGAGTTTTCCAATCAT+TGG | - | chr3_1:80958695-80958714 | Msa0379650:intron | 30.0% |
| ACAGCTAATTCAAATAATCC+AGG | + | chr3_1:80958825-80958844 | None:intergenic | 30.0% | |
| TTATCTCGGAATGTATAAAG+TGG | - | chr3_1:80958845-80958864 | Msa0379650:CDS | 30.0% | |
| AATTATTGTGAAATTGTGGG+TGG | - | chr3_1:80958930-80958949 | Msa0379650:CDS | 30.0% | |
| TTAAAAAAGCAACTTTCCCA+TGG | + | chr3_1:80958982-80959001 | None:intergenic | 30.0% | |
| AAAATTGGAATCATCGGAAG+AGG | + | chr3_1:80952210-80952229 | None:intergenic | 35.0% | |
| ! | TCTTCCGATGATTCCAATTT+TGG | - | chr3_1:80952209-80952228 | Msa0379650:three_prime_UTR | 35.0% |
| !!! | TTTTGGTTCACAGTTTCTTC+AGG | - | chr3_1:80952226-80952245 | Msa0379650:three_prime_UTR | 35.0% |
| GAGATTGGATTTATGGATCT+GGG | - | chr3_1:80952391-80952410 | Msa0379650:CDS | 35.0% | |
| AGATTGGATTTATGGATCTG+GGG | - | chr3_1:80952392-80952411 | Msa0379650:CDS | 35.0% | |
| ATCAGTTTGGATAACCCATT+TGG | - | chr3_1:80952599-80952618 | Msa0379650:intron | 35.0% | |
| !! | TAAATTAGGGGTGTCCAAAT+GGG | + | chr3_1:80952616-80952635 | None:intergenic | 35.0% |
| TAGGAACACTGGGTAAATTA+GGG | + | chr3_1:80952629-80952648 | None:intergenic | 35.0% | |
| TCTTTCCAAATAAAACCGGT+AGG | + | chr3_1:80952648-80952667 | None:intergenic | 35.0% | |
| ! | TGATTTAGGATTTGAGACCA+TGG | + | chr3_1:80952714-80952733 | None:intergenic | 35.0% |
| AACTGAACCAATCAAGTTCA+AGG | - | chr3_1:80952780-80952799 | Msa0379650:intron | 35.0% | |
| TAACGAACCTTGAACTTGAT+TGG | + | chr3_1:80952790-80952809 | None:intergenic | 35.0% | |
| !! | TCAGTTTAGCTTGGTTTGAT+TGG | - | chr3_1:80952851-80952870 | Msa0379650:intron | 35.0% |
| !! | CTTGGTTTGATTGGTTTCAT+CGG | - | chr3_1:80952860-80952879 | Msa0379650:intron | 35.0% |
| GGAAACAACCTCGTAAATAT+TGG | - | chr3_1:80952942-80952961 | Msa0379650:intron | 35.0% | |
| AAATGCTGCCAATATTTACG+AGG | + | chr3_1:80952953-80952972 | None:intergenic | 35.0% | |
| ! | CGTAAATATTGGCAGCATTT+TGG | - | chr3_1:80952953-80952972 | Msa0379650:intron | 35.0% |
| AAGCTAACTATGTCGGAAAT+CGG | + | chr3_1:80953014-80953033 | None:intergenic | 35.0% | |
| TGTGTGAAAGCTAACTATGT+CGG | + | chr3_1:80953021-80953040 | None:intergenic | 35.0% | |
| !! | GTTGGTGATAGTGTAGAATT+TGG | + | chr3_1:80953154-80953173 | None:intergenic | 35.0% |
| ! | ATGTGATTGTTGTTGTTGTC+AGG | + | chr3_1:80953226-80953245 | None:intergenic | 35.0% |
| !! | AATGTTTATGTTTCTGGCGA+TGG | - | chr3_1:80953319-80953338 | Msa0379650:intron | 35.0% |
| ! | GGGAAAAATTGAACCTTTTC+AGG | + | chr3_1:80953439-80953458 | None:intergenic | 35.0% |
| AGGTGGATGTGAATTAAATC+CGG | - | chr3_1:80953563-80953582 | Msa0379650:intron | 35.0% | |
| ATTGTCAGTAACTTCATCCT+GGG | + | chr3_1:80953681-80953700 | None:intergenic | 35.0% | |
| AATTGTCAGTAACTTCATCC+TGG | + | chr3_1:80953682-80953701 | None:intergenic | 35.0% | |
| ATTTGGGTATTTGTGTAGAG+TGG | - | chr3_1:80953719-80953738 | Msa0379650:intron | 35.0% | |
| !!! | CTTTTTTGCACATGATGGTT+TGG | - | chr3_1:80953956-80953975 | Msa0379650:intron | 35.0% |
| ATTGATTGGAGTGTGTCTAA+TGG | + | chr3_1:80954256-80954275 | None:intergenic | 35.0% | |
| GTGATGTGGCATTAATTGAT+TGG | + | chr3_1:80954270-80954289 | None:intergenic | 35.0% | |
| AATTAGAAAAACGGGTGATG+TGG | + | chr3_1:80954284-80954303 | None:intergenic | 35.0% | |
| ATCAAGTAAACGAGTGTTTG+TGG | + | chr3_1:80954404-80954423 | None:intergenic | 35.0% | |
| AATTCATTTCGAACCGATCA+CGG | + | chr3_1:80954499-80954518 | None:intergenic | 35.0% | |
| TGTAGAAGAGAAGAAAGCAA+AGG | - | chr3_1:80954689-80954708 | Msa0379650:intron | 35.0% | |
| AAGAGAAGAAAGCAAAGGAA+TGG | - | chr3_1:80954694-80954713 | Msa0379650:intron | 35.0% | |
| AGATGTATCAACTATGTGTG+TGG | + | chr3_1:80954741-80954760 | None:intergenic | 35.0% | |
| ! | TAGTTGATACATCTGCAAAG+AGG | - | chr3_1:80954747-80954766 | Msa0379650:intron | 35.0% |
| ! | AGTTGATACATCTGCAAAGA+GGG | - | chr3_1:80954748-80954767 | Msa0379650:intron | 35.0% |
| TGCAAAGAGGGATTTAATGT+TGG | - | chr3_1:80954760-80954779 | Msa0379650:intron | 35.0% | |
| ! | ATAGATACCTGGTACAGTTT+TGG | - | chr3_1:80954859-80954878 | Msa0379650:intron | 35.0% |
| !! | TTTTAACCGGTTCTTCAAGT+TGG | + | chr3_1:80954965-80954984 | None:intergenic | 35.0% |
| AACTTGAAGAACCGGTTAAA+AGG | - | chr3_1:80954964-80954983 | Msa0379650:intron | 35.0% | |
| TTCAGACAAGAGAAATGCTA+AGG | + | chr3_1:80955064-80955083 | None:intergenic | 35.0% | |
| ATGATGCGATGTGAATAACT+AGG | - | chr3_1:80955119-80955138 | Msa0379650:intron | 35.0% | |
| TTTCGGAGTCTATTTACTGA+GGG | + | chr3_1:80955474-80955493 | None:intergenic | 35.0% | |
| AAATACAAGGGAAGAGCTTT+CGG | + | chr3_1:80955491-80955510 | None:intergenic | 35.0% | |
| TATGATGAAAACAGGCAGAA+TGG | + | chr3_1:80955828-80955847 | None:intergenic | 35.0% | |
| CTAGCAGAAATGAAACAACT+TGG | + | chr3_1:80956022-80956041 | None:intergenic | 35.0% | |
| AGTAAATGGAAGAATGACAC+TGG | + | chr3_1:80956048-80956067 | None:intergenic | 35.0% | |
| TTAAGGACAGAGACAAAACA+CGG | + | chr3_1:80956109-80956128 | None:intergenic | 35.0% | |
| TGTCTCCTAAATCAGAAACA+TGG | + | chr3_1:80956151-80956170 | None:intergenic | 35.0% | |
| TGCTAGTGTTCCTCTTTATT+GGG | - | chr3_1:80956516-80956535 | Msa0379650:intron | 35.0% | |
| ACTAGAACATCCCAATAAAG+AGG | + | chr3_1:80956529-80956548 | None:intergenic | 35.0% | |
| ACATCAGCTAAGAAACAAGA+TGG | - | chr3_1:80956723-80956742 | Msa0379650:intron | 35.0% | |
| CTGTACAACCATGTAAATCA+AGG | + | chr3_1:80956879-80956898 | None:intergenic | 35.0% | |
| GATAGATGAACATGAACAAG+AGG | + | chr3_1:80957049-80957068 | None:intergenic | 35.0% | |
| CTATGTCTCTTTAGTGCTAT+GGG | - | chr3_1:80957113-80957132 | Msa0379650:intron | 35.0% | |
| ! | CTTTAGTGCTATGGGTTAAA+CGG | - | chr3_1:80957121-80957140 | Msa0379650:intron | 35.0% |
| GAACTCTCATTGTAATCAGA+AGG | - | chr3_1:80957276-80957295 | Msa0379650:CDS | 35.0% | |
| !! | ATTTCAACCCGCTTTGAAAT+GGG | + | chr3_1:80957591-80957610 | None:intergenic | 35.0% |
| !! | AATTTCAACCCGCTTTGAAA+TGG | + | chr3_1:80957592-80957611 | None:intergenic | 35.0% |
| AGAGGAAGATGAAAGAGAAA+GGG | - | chr3_1:80957672-80957691 | Msa0379650:CDS | 35.0% | |
| ATGAAAGAGAAAGGGTAGTT+AGG | - | chr3_1:80957680-80957699 | Msa0379650:CDS | 35.0% | |
| GATAGATAGAGAGAAAGTCA+TGG | - | chr3_1:80957711-80957730 | Msa0379650:CDS | 35.0% | |
| ATTGACAACAGAGCTTGAAA+GGG | + | chr3_1:80957770-80957789 | None:intergenic | 35.0% | |
| TATTGACAACAGAGCTTGAA+AGG | + | chr3_1:80957771-80957790 | None:intergenic | 35.0% | |
| CATAGTTTCAAAGCATGTCA+AGG | - | chr3_1:80958161-80958180 | Msa0379650:intron | 35.0% | |
| GAAGCCAATGATTCTAATTG+TGG | - | chr3_1:80958234-80958253 | Msa0379650:intron | 35.0% | |
| TATGCTGTCATTCACTAGAT+TGG | - | chr3_1:80958368-80958387 | Msa0379650:intron | 35.0% | |
| GGAATTTGCAACTAATGTAC+TGG | + | chr3_1:80958417-80958436 | None:intergenic | 35.0% | |
| ! | TTCCGACTAAGAAATTTTGC+AGG | - | chr3_1:80958433-80958452 | Msa0379650:intron | 35.0% |
| ! | TCCGACTAAGAAATTTTGCA+GGG | - | chr3_1:80958434-80958453 | Msa0379650:intron | 35.0% |
| ACCCTGCAAAATTTCTTAGT+CGG | + | chr3_1:80958438-80958457 | None:intergenic | 35.0% | |
| ! | AAGAAATTTTGCAGGGTATG+AGG | - | chr3_1:80958441-80958460 | Msa0379650:intron | 35.0% |
| ! | AGAAATTTTGCAGGGTATGA+GGG | - | chr3_1:80958442-80958461 | Msa0379650:intron | 35.0% |
| !! | TGTTGATGATAAAACAGCTG+TGG | - | chr3_1:80958665-80958684 | Msa0379650:intron | 35.0% |
| !!! | AGTTTTCCAATCATTGGCTT+TGG | - | chr3_1:80958701-80958720 | Msa0379650:intron | 35.0% |
| ATTCTATCAGTCGAATCCAT+TGG | + | chr3_1:80958749-80958768 | None:intergenic | 35.0% | |
| ! | AGGAAATTTGTTTCCCATGA+TGG | - | chr3_1:80959064-80959083 | Msa0379650:CDS | 35.0% |
| ! | GGAAATTTGTTTCCCATGAT+GGG | - | chr3_1:80959065-80959084 | Msa0379650:CDS | 35.0% |
| TGCATAAACTTTCCCATCAT+GGG | + | chr3_1:80959080-80959099 | None:intergenic | 35.0% | |
| GGAGATTGGATTTATGGATC+TGG | - | chr3_1:80952390-80952409 | Msa0379650:CDS | 40.0% | |
| !! | TACTGGTTCAGGACAAAATC+CGG | - | chr3_1:80952456-80952475 | Msa0379650:intron | 40.0% |
| CTGGTTCATGCTAATTGAAC+CGG | + | chr3_1:80952478-80952497 | None:intergenic | 40.0% | |
| !! | GTAAATTAGGGGTGTCCAAA+TGG | + | chr3_1:80952617-80952636 | None:intergenic | 40.0% |
| AGGAACACTGGGTAAATTAG+GGG | + | chr3_1:80952628-80952647 | None:intergenic | 40.0% | |
| GTAGGAACACTGGGTAAATT+AGG | + | chr3_1:80952630-80952649 | None:intergenic | 40.0% | |
| AATTTACCCAGTGTTCCTAC+CGG | - | chr3_1:80952630-80952649 | Msa0379650:intron | 40.0% | |
| ATAAAACCGGTAGGAACACT+GGG | + | chr3_1:80952639-80952658 | None:intergenic | 40.0% | |
| AATAAAACCGGTAGGAACAC+TGG | + | chr3_1:80952640-80952659 | None:intergenic | 40.0% | |
| !!! | GTGTTCCTACCGGTTTTATT+TGG | - | chr3_1:80952640-80952659 | Msa0379650:intron | 40.0% |
| !! | TGATGAAGAGGGGTATTGTT+GGG | + | chr3_1:80952989-80953008 | None:intergenic | 40.0% |
| !! | ATGATGAAGAGGGGTATTGT+TGG | + | chr3_1:80952990-80953009 | None:intergenic | 40.0% |
| GAAATCGGAATGATGAAGAG+GGG | + | chr3_1:80952999-80953018 | None:intergenic | 40.0% | |
| GGAAATCGGAATGATGAAGA+GGG | + | chr3_1:80953000-80953019 | None:intergenic | 40.0% | |
| TAGAGGGGAAAGAAATGTGT+CGG | + | chr3_1:80953072-80953091 | None:intergenic | 40.0% | |
| TTCTTTCCCCTCTATCAATC+AGG | - | chr3_1:80953078-80953097 | Msa0379650:intron | 40.0% | |
| ACCCTAACCTGATTGATAGA+GGG | + | chr3_1:80953088-80953107 | None:intergenic | 40.0% | |
| AACCCTAACCTGATTGATAG+AGG | + | chr3_1:80953089-80953108 | None:intergenic | 40.0% | |
| CTATCAATCAGGTTAGGGTT+TGG | - | chr3_1:80953089-80953108 | Msa0379650:intron | 40.0% | |
| ATCAGGTTAGGGTTTGGATT+AGG | - | chr3_1:80953095-80953114 | Msa0379650:intron | 40.0% | |
| TCAGGTTAGGGTTTGGATTA+GGG | - | chr3_1:80953096-80953115 | Msa0379650:intron | 40.0% | |
| ! | TTAGGGTTTGGATTAGGGTT+AGG | - | chr3_1:80953101-80953120 | Msa0379650:intron | 40.0% |
| ! | TAGGGTTTGGATTAGGGTTA+GGG | - | chr3_1:80953102-80953121 | Msa0379650:intron | 40.0% |
| !!! | GGGTATTTTGATGCATTCGA+AGG | + | chr3_1:80953133-80953152 | None:intergenic | 40.0% |
| TTCGTTGTTCTTGATCTGGT+CGG | + | chr3_1:80953200-80953219 | None:intergenic | 40.0% | |
| GATCTTCGTTGTTCTTGATC+TGG | + | chr3_1:80953204-80953223 | None:intergenic | 40.0% | |
| TGATTCTGTTACCCCTGAAA+AGG | - | chr3_1:80953423-80953442 | Msa0379650:intron | 40.0% | |
| ! | CAATCAGTGCTGTTACTGTT+AGG | - | chr3_1:80953543-80953562 | Msa0379650:intron | 40.0% |
| GGTGGATGTGAATTAAATCC+GGG | - | chr3_1:80953564-80953583 | Msa0379650:intron | 40.0% | |
| AAATCCGGGTTCACAATGTT+TGG | - | chr3_1:80953578-80953597 | Msa0379650:intron | 40.0% | |
| TGTTGTAGAATTTGACTCCC+AGG | - | chr3_1:80953661-80953680 | Msa0379650:intron | 40.0% | |
| CTTCTGACGAAACCTAATCA+AGG | + | chr3_1:80953789-80953808 | None:intergenic | 40.0% | |
| TGATTAGGTTTCGTCAGAAG+AGG | - | chr3_1:80953789-80953808 | Msa0379650:intron | 40.0% | |
| ! | TTGCACATGATGGTTTGGAA+CGG | - | chr3_1:80953961-80953980 | Msa0379650:intron | 40.0% |
| CAAGCATTATCCCACTAAGT+GGG | - | chr3_1:80954038-80954057 | Msa0379650:intron | 40.0% | |
| AATTAGCCAACCCACTTAGT+GGG | + | chr3_1:80954051-80954070 | None:intergenic | 40.0% | |
| CACTGTAAAGCACATCTTGT+TGG | + | chr3_1:80954120-80954139 | None:intergenic | 40.0% | |
| ! | ACTTCCCATGTTTTCCAGTA+AGG | - | chr3_1:80954447-80954466 | Msa0379650:intron | 40.0% |
| AGAAGAAAGCAAAGGAATGG+TGG | - | chr3_1:80954697-80954716 | Msa0379650:intron | 40.0% | |
| GAAGAAAGCAAAGGAATGGT+GGG | - | chr3_1:80954698-80954717 | Msa0379650:intron | 40.0% | |
| !! | AAGGAATGGTGGGTTTCATA+AGG | - | chr3_1:80954708-80954727 | Msa0379650:intron | 40.0% |
| TTCTGTCGTTCATACTACAC+TGG | + | chr3_1:80954795-80954814 | None:intergenic | 40.0% | |
| ATTCACATCGCATCATCACA+TGG | + | chr3_1:80955115-80955134 | None:intergenic | 40.0% | |
| TACTCCTTCCGTTCAATACA+AGG | - | chr3_1:80955198-80955217 | Msa0379650:intron | 40.0% | |
| TGATCCTTGTATTGAACGGA+AGG | + | chr3_1:80955205-80955224 | None:intergenic | 40.0% | |
| CTTTCGGAGTCTATTTACTG+AGG | + | chr3_1:80955475-80955494 | None:intergenic | 40.0% | |
| CAAGCAATTGGAAGCAATGA+GGG | + | chr3_1:80955720-80955739 | None:intergenic | 40.0% | |
| ACAAGCAATTGGAAGCAATG+AGG | + | chr3_1:80955721-80955740 | None:intergenic | 40.0% | |
| TCATTGCTTCCAATTGCTTG+TGG | - | chr3_1:80955720-80955739 | Msa0379650:intron | 40.0% | |
| AATGCTCTACCACAAGCAAT+TGG | + | chr3_1:80955732-80955751 | None:intergenic | 40.0% | |
| ! | GGTAGAGCATTTCACTGTTA+TGG | - | chr3_1:80955741-80955760 | Msa0379650:intron | 40.0% |
| GGGAGATGTATGATGAAAAC+AGG | + | chr3_1:80955836-80955855 | None:intergenic | 40.0% | |
| TCTGTTTGTAAGATAGGCAG+CGG | + | chr3_1:80955881-80955900 | None:intergenic | 40.0% | |
| CAGCAGTCTGTTTGTAAGAT+AGG | + | chr3_1:80955887-80955906 | None:intergenic | 40.0% | |
| TCAAGCATCCAACATACTGA+TGG | + | chr3_1:80956311-80956330 | None:intergenic | 40.0% | |
| CAGGCAAGCAATACAATTGT+TGG | + | chr3_1:80956339-80956358 | None:intergenic | 40.0% | |
| TTGGAGCTACACTTTAGCAT+TGG | + | chr3_1:80956489-80956508 | None:intergenic | 40.0% | |
| GTGCTAGTGTTCCTCTTTAT+TGG | - | chr3_1:80956515-80956534 | Msa0379650:intron | 40.0% | |
| ! | GATTGTATTGACAAATGGCC+TGG | - | chr3_1:80956555-80956574 | Msa0379650:intron | 40.0% |
| TCAGCTAAGAAACAAGATGG+AGG | - | chr3_1:80956726-80956745 | Msa0379650:intron | 40.0% | |
| AACAAGATGGAGGTAACAGT+TGG | - | chr3_1:80956736-80956755 | Msa0379650:intron | 40.0% | |
| ACAAGATGGAGGTAACAGTT+GGG | - | chr3_1:80956737-80956756 | Msa0379650:intron | 40.0% | |
| GACTGAATATGGGTTTCTTG+TGG | - | chr3_1:80956816-80956835 | Msa0379650:intron | 40.0% | |
| ATGCATTGCATAGTGTCCTA+GGG | + | chr3_1:80956962-80956981 | None:intergenic | 40.0% | |
| CCATAGCACTAAAGAGACAT+AGG | + | chr3_1:80957115-80957134 | None:intergenic | 40.0% | |
| CCTATGTCTCTTTAGTGCTA+TGG | - | chr3_1:80957112-80957131 | Msa0379650:intron | 40.0% | |
| ! | AAACTTTTCTTCCCACCAGA+TGG | - | chr3_1:80957206-80957225 | Msa0379650:CDS | 40.0% |
| ACTTCTACATCAATGCCATC+TGG | + | chr3_1:80957224-80957243 | None:intergenic | 40.0% | |
| CTTTACCTCCCATTTCAAAG+CGG | - | chr3_1:80957580-80957599 | Msa0379650:intron | 40.0% | |
| TTTACCTCCCATTTCAAAGC+GGG | - | chr3_1:80957581-80957600 | Msa0379650:intron | 40.0% | |
| !! | TTTAGGGTGTTTTGTGAGAG+AGG | - | chr3_1:80957654-80957673 | Msa0379650:CDS | 40.0% |
| GAGAGGAAGATGAAAGAGAA+AGG | - | chr3_1:80957671-80957690 | Msa0379650:CDS | 40.0% | |
| TCAAGCTCTGTTGTCAATAG+CGG | - | chr3_1:80957772-80957791 | Msa0379650:CDS | 40.0% | |
| ATGTTGTCAAAGCGGAAATG+TGG | + | chr3_1:80958144-80958163 | None:intergenic | 40.0% | |
| GTAATGAGGACTTGAACTGT+GGG | - | chr3_1:80958619-80958638 | Msa0379650:intron | 40.0% | |
| !! | TAGAATGTACAGCTCTAGAG+AGG | - | chr3_1:80958763-80958782 | Msa0379650:intron | 40.0% |
| AAAAGCAACTTTCCCATGGT+GGG | + | chr3_1:80958978-80958997 | None:intergenic | 40.0% | |
| AAAAAGCAACTTTCCCATGG+TGG | + | chr3_1:80958979-80958998 | None:intergenic | 40.0% | |
| CTGCATAAACTTTCCCATCA+TGG | + | chr3_1:80959081-80959100 | None:intergenic | 40.0% | |
| !! | AGAGAGTGGTGGTTGATTTG+TGG | + | chr3_1:80951993-80952012 | None:intergenic | 45.0% |
| !! | ACGGTGTTTCTGAAATGGTG+CGG | + | chr3_1:80952019-80952038 | None:intergenic | 45.0% |
| ! | CTGAGACGGTGTTTCTGAAA+TGG | + | chr3_1:80952024-80952043 | None:intergenic | 45.0% |
| CCAGTATGGAGGTAGTGTTT+CGG | + | chr3_1:80952069-80952088 | None:intergenic | 45.0% | |
| ATCTGCGGCGATTGCAAAAA+CGG | - | chr3_1:80952137-80952156 | Msa0379650:three_prime_UTR | 45.0% | |
| GAATCATCGGAAGAGGAAGA+AGG | + | chr3_1:80952203-80952222 | None:intergenic | 45.0% | |
| ! | AGCATGAACCAGTACTGAAC+CGG | - | chr3_1:80952486-80952505 | Msa0379650:intron | 45.0% |
| CGGAAATCGGAATGATGAAG+AGG | + | chr3_1:80953001-80953020 | None:intergenic | 45.0% | |
| TCCCCTCTATCAATCAGGTT+AGG | - | chr3_1:80953083-80953102 | Msa0379650:intron | 45.0% | |
| CCCTAACCTGATTGATAGAG+GGG | + | chr3_1:80953087-80953106 | None:intergenic | 45.0% | |
| CCCCTCTATCAATCAGGTTA+GGG | - | chr3_1:80953084-80953103 | Msa0379650:intron | 45.0% | |
| CAAGGGTTTGTGACTCGAAA+TGG | + | chr3_1:80953249-80953268 | None:intergenic | 45.0% | |
| CAAACCCTTGAAGATGCTTC+CGG | - | chr3_1:80953259-80953278 | Msa0379650:intron | 45.0% | |
| GTTGAACAGACATATCAGGG+TGG | + | chr3_1:80953348-80953367 | None:intergenic | 45.0% | |
| ! | TCAGTGCTGTTACTGTTAGG+TGG | - | chr3_1:80953546-80953565 | Msa0379650:intron | 45.0% |
| GTGTCCAAACATTGTGAACC+CGG | + | chr3_1:80953585-80953604 | None:intergenic | 45.0% | |
| ACACATCGCCTCTAAATCAG+AGG | - | chr3_1:80953601-80953620 | Msa0379650:intron | 45.0% | |
| CACATCGCCTCTAAATCAGA+GGG | - | chr3_1:80953602-80953621 | Msa0379650:intron | 45.0% | |
| TGCGTCAAGAAGTTGCACTA+AGG | - | chr3_1:80953849-80953868 | Msa0379650:intron | 45.0% | |
| CCACTTAGTGGGATAATGCT+TGG | + | chr3_1:80954040-80954059 | None:intergenic | 45.0% | |
| CCAAGCATTATCCCACTAAG+TGG | - | chr3_1:80954037-80954056 | Msa0379650:intron | 45.0% | |
| CATTATCCCACTAAGTGGGT+TGG | - | chr3_1:80954042-80954061 | Msa0379650:intron | 45.0% | |
| CAATTAGCCAACCCACTTAG+TGG | + | chr3_1:80954052-80954071 | None:intergenic | 45.0% | |
| AACTTGACGAACCGGTTAGA+AGG | + | chr3_1:80954312-80954331 | None:intergenic | 45.0% | |
| !! | TTCTAACCGGTTCGTCAAGT+TGG | - | chr3_1:80954311-80954330 | Msa0379650:CDS | 45.0% |
| GTAAACGAGTGTTTGTGGCT+GGG | + | chr3_1:80954399-80954418 | None:intergenic | 45.0% | |
| AGTAAACGAGTGTTTGTGGC+TGG | + | chr3_1:80954400-80954419 | None:intergenic | 45.0% | |
| GGAAGTCCTCGGTATAGTTT+AGG | + | chr3_1:80954433-80954452 | None:intergenic | 45.0% | |
| TGGAAAACATGGGAAGTCCT+CGG | + | chr3_1:80954444-80954463 | None:intergenic | 45.0% | |
| GGTCAAACACTTTCCGTGAT+CGG | - | chr3_1:80954483-80954502 | Msa0379650:intron | 45.0% | |
| !! | GATACCTGGTACAGTTTTGG+AGG | - | chr3_1:80954862-80954881 | Msa0379650:intron | 45.0% |
| !!! | TGGTACAGTTTTGGAGGAGT+GGG | - | chr3_1:80954868-80954887 | Msa0379650:intron | 45.0% |
| TTAAAGGGGCAATTCTGCTG+TGG | - | chr3_1:80955159-80955178 | Msa0379650:intron | 45.0% | |
| AATGAGGGTTCACTGTACAG+TGG | + | chr3_1:80955705-80955724 | None:intergenic | 45.0% | |
| GAATGGTGCAAATCAGAGGA+AGG | + | chr3_1:80955811-80955830 | None:intergenic | 45.0% | |
| CTGTTTGTAAGATAGGCAGC+GGG | + | chr3_1:80955880-80955899 | None:intergenic | 45.0% | |
| AGCATCCTCCATCAGTATGT+TGG | - | chr3_1:80956300-80956319 | Msa0379650:intron | 45.0% | |
| AGCATCCAACATACTGATGG+AGG | + | chr3_1:80956308-80956327 | None:intergenic | 45.0% | |
| ! | GGAACACTAGCACAGTCTTT+TGG | + | chr3_1:80956508-80956527 | None:intergenic | 45.0% |
| ATGCAGGATGCAACGTAGTA+AGG | - | chr3_1:80956692-80956711 | Msa0379650:intron | 45.0% | |
| TGCAGGATGCAACGTAGTAA+GGG | - | chr3_1:80956693-80956712 | Msa0379650:intron | 45.0% | |
| CAAGATGGAGGTAACAGTTG+GGG | - | chr3_1:80956738-80956757 | Msa0379650:intron | 45.0% | |
| TTGTACAGATGCACACACTG+TGG | - | chr3_1:80956891-80956910 | Msa0379650:intron | 45.0% | |
| AATCTACCCCTATGATGCGA+AGG | - | chr3_1:80956925-80956944 | Msa0379650:intron | 45.0% | |
| ATCTACCCCTATGATGCGAA+GGG | - | chr3_1:80956926-80956945 | Msa0379650:intron | 45.0% | |
| CATGCATTGCATAGTGTCCT+AGG | + | chr3_1:80956963-80956982 | None:intergenic | 45.0% | |
| AGGACACTATGCAATGCATG+TGG | - | chr3_1:80956963-80956982 | Msa0379650:intron | 45.0% | |
| GGACACTATGCAATGCATGT+GGG | - | chr3_1:80956964-80956983 | Msa0379650:intron | 45.0% | |
| ! | CAATGCATGTGGGCTTTTCT+GGG | - | chr3_1:80956974-80956993 | Msa0379650:intron | 45.0% |
| ! | TGGGCTTTTCTGGGCAAATA+GGG | - | chr3_1:80956983-80957002 | Msa0379650:intron | 45.0% |
| ! | TAGTGCTATGGGTTAAACGG+CGG | - | chr3_1:80957124-80957143 | Msa0379650:intron | 45.0% |
| GAAAAGTTTGTCCACACTGC+AGG | + | chr3_1:80957195-80957214 | None:intergenic | 45.0% | |
| CTACATCAATGCCATCTGGT+GGG | + | chr3_1:80957220-80957239 | None:intergenic | 45.0% | |
| TCTACATCAATGCCATCTGG+TGG | + | chr3_1:80957221-80957240 | None:intergenic | 45.0% | |
| !! | CGCTTTGAAATGGGAGGTAA+AGG | + | chr3_1:80957582-80957601 | None:intergenic | 45.0% |
| AGCTTGAAAGGGTTAGGACT+GGG | + | chr3_1:80957759-80957778 | None:intergenic | 45.0% | |
| CAACAGAGCTTGAAAGGGTT+AGG | + | chr3_1:80957765-80957784 | None:intergenic | 45.0% | |
| !!! | TTTTTTCCGCTCCGCTATAG+CGG | + | chr3_1:80957807-80957826 | None:intergenic | 45.0% |
| AAATTGGTGTGGTACGGTAG+CGG | + | chr3_1:80958102-80958121 | None:intergenic | 45.0% | |
| TACCGTACCACACCAATTTG+TGG | - | chr3_1:80958103-80958122 | Msa0379650:intron | 45.0% | |
| ACCGTACCACACCAATTTGT+GGG | - | chr3_1:80958104-80958123 | Msa0379650:intron | 45.0% | |
| GTTTCAAAGCATGTCAAGGG+AGG | - | chr3_1:80958165-80958184 | Msa0379650:intron | 45.0% | |
| !! | AGAATCATTGGCTTCACGGT+TGG | + | chr3_1:80958229-80958248 | None:intergenic | 45.0% |
| TGAGGGATCTATCTACTGCT+AGG | - | chr3_1:80958305-80958324 | Msa0379650:intron | 45.0% | |
| CAACATAAGCATACCTGCTC+AGG | + | chr3_1:80958515-80958534 | None:intergenic | 45.0% | |
| !! | GGGTTGTTGTTTACTCAGAG+TGG | - | chr3_1:80958543-80958562 | Msa0379650:intron | 45.0% |
| ! | ATTTGATGATCAGGTCGGTG+AGG | - | chr3_1:80958596-80958615 | Msa0379650:intron | 45.0% |
| ! | TTTGATGATCAGGTCGGTGA+GGG | - | chr3_1:80958597-80958616 | Msa0379650:intron | 45.0% |
| GGTAATGAGGACTTGAACTG+TGG | - | chr3_1:80958618-80958637 | Msa0379650:intron | 45.0% | |
| TCAACAGATTCGTTATGCGC+AGG | + | chr3_1:80958651-80958670 | None:intergenic | 45.0% | |
| ! | ATGGTGGGAAAATCTGTCTG+AGG | + | chr3_1:80958963-80958982 | None:intergenic | 45.0% |
| ! | TCAGACAGATTTTCCCACCA+TGG | - | chr3_1:80958962-80958981 | Msa0379650:CDS | 45.0% |
| ! | CAGACAGATTTTCCCACCAT+GGG | - | chr3_1:80958963-80958982 | Msa0379650:CDS | 45.0% |
| !! | GTGTTTCTGAAATGGTGCGG+CGG | + | chr3_1:80952016-80952035 | None:intergenic | 50.0% |
| ATGGTAAGTGGTGGCTGAGA+CGG | + | chr3_1:80952038-80952057 | None:intergenic | 50.0% | |
| ! | TAGTGTTTCGGTGGTGGTGA+TGG | + | chr3_1:80952057-80952076 | None:intergenic | 50.0% |
| GTATGGAGGTAGTGTTTCGG+TGG | + | chr3_1:80952066-80952085 | None:intergenic | 50.0% | |
| CCGAAACACTACCTCCATAC+TGG | - | chr3_1:80952066-80952085 | Msa0379650:three_prime_UTR | 50.0% | |
| AAGTGGTAGCACCAGTATGG+AGG | + | chr3_1:80952080-80952099 | None:intergenic | 50.0% | |
| TCGAAGTGGTAGCACCAGTA+TGG | + | chr3_1:80952083-80952102 | None:intergenic | 50.0% | |
| AATCTCCACGACCTCATCTG+CGG | - | chr3_1:80952122-80952141 | Msa0379650:three_prime_UTR | 50.0% | |
| ! | TTTTGCAATCGCCGCAGATG+AGG | + | chr3_1:80952136-80952155 | None:intergenic | 50.0% |
| AGTTCAGTCCGGTTCAGTAC+TGG | + | chr3_1:80952497-80952516 | None:intergenic | 50.0% | |
| CGGTTCGATACAGTTCAGTC+CGG | + | chr3_1:80952508-80952527 | None:intergenic | 50.0% | |
| CGGACTGAACTGTATCGAAC+CGG | - | chr3_1:80952506-80952525 | Msa0379650:intron | 50.0% | |
| ! | AGGATTTGAGACCATGGAGC+AGG | + | chr3_1:80952708-80952727 | None:intergenic | 50.0% |
| !! | TTCGCCGGAAGCATCTTCAA+GGG | + | chr3_1:80953266-80953285 | None:intergenic | 50.0% |
| GATTTGACCTTCACCTTCGC+CGG | + | chr3_1:80953281-80953300 | None:intergenic | 50.0% | |
| ! | CACGAAACGAAAGTGTGAGC+TGG | + | chr3_1:80953387-80953406 | None:intergenic | 50.0% |
| CAGCTCACACTTTCGTTTCG+TGG | - | chr3_1:80953385-80953404 | Msa0379650:intron | 50.0% | |
| TGCGGCTGACTACATCTTGT+AGG | + | chr3_1:80953755-80953774 | None:intergenic | 50.0% | |
| AACGAGCAGCGTCCTTGATT+AGG | - | chr3_1:80953774-80953793 | Msa0379650:intron | 50.0% | |
| CTCTCTCCAACTTGACGAAC+CGG | + | chr3_1:80954320-80954339 | None:intergenic | 50.0% | |
| CACTCCTCCAAAACTGTACC+AGG | + | chr3_1:80954869-80954888 | None:intergenic | 50.0% | |
| !!! | CTGGTACAGTTTTGGAGGAG+TGG | - | chr3_1:80954867-80954886 | Msa0379650:intron | 50.0% |
| !!! | GGTACAGTTTTGGAGGAGTG+GGG | - | chr3_1:80954869-80954888 | Msa0379650:intron | 50.0% |
| !!! | GTACAGTTTTGGAGGAGTGG+GGG | - | chr3_1:80954870-80954889 | Msa0379650:intron | 50.0% |
| !! | CGGTTCTTCAAGTTGGAGAG+CGG | + | chr3_1:80954958-80954977 | None:intergenic | 50.0% |
| CGCTCTCCAACTTGAAGAAC+CGG | - | chr3_1:80954956-80954975 | Msa0379650:intron | 50.0% | |
| GGCAGAATGGTGCAAATCAG+AGG | + | chr3_1:80955815-80955834 | None:intergenic | 50.0% | |
| TGACAAATGGCCTGGTGCTT+TGG | - | chr3_1:80956563-80956582 | Msa0379650:intron | 50.0% | |
| ! | GTAACAGGTACCAAAGCACC+AGG | + | chr3_1:80956576-80956595 | None:intergenic | 50.0% |
| TCTACCCCTATGATGCGAAG+GGG | - | chr3_1:80956927-80956946 | Msa0379650:intron | 50.0% | |
| ! | GCAATGCATGTGGGCTTTTC+TGG | - | chr3_1:80956973-80956992 | Msa0379650:intron | 50.0% |
| ! | GTGGGCTTTTCTGGGCAAAT+AGG | - | chr3_1:80956982-80957001 | Msa0379650:intron | 50.0% |
| ! | AGTGCTATGGGTTAAACGGC+GGG | - | chr3_1:80957125-80957144 | Msa0379650:intron | 50.0% |
| AAGTTTGTCCACACTGCAGG+TGG | + | chr3_1:80957192-80957211 | None:intergenic | 50.0% | |
| TAGGTCCTAACAGCAAGGCT+GGG | + | chr3_1:80957306-80957325 | None:intergenic | 50.0% | |
| !! | AGCCTTGCTGTTAGGACCTA+GGG | - | chr3_1:80957306-80957325 | Msa0379650:CDS | 50.0% |
| ! | TTGCTGTTAGGACCTAGGGA+CGG | - | chr3_1:80957310-80957329 | Msa0379650:CDS | 50.0% |
| !! | TCAACCCGCTTTGAAATGGG+AGG | + | chr3_1:80957588-80957607 | None:intergenic | 50.0% |
| GTTAGGACTGGGTGACTTTG+TGG | + | chr3_1:80957748-80957767 | None:intergenic | 50.0% | |
| GAGCTTGAAAGGGTTAGGAC+TGG | + | chr3_1:80957760-80957779 | None:intergenic | 50.0% | |
| ! | TTTTTCCGCTCCGCTATAGC+GGG | + | chr3_1:80957806-80957825 | None:intergenic | 50.0% |
| CTAGCCGCGACGAAAAAAAG+CGG | - | chr3_1:80957841-80957860 | Msa0379650:CDS | 50.0% | |
| AAAAAAGCGGCCCGCTATTC+AGG | - | chr3_1:80957854-80957873 | Msa0379650:CDS | 50.0% | |
| ACACACACCACGCAGAAAGA+CGG | - | chr3_1:80957916-80957935 | Msa0379650:CDS | 50.0% | |
| TGCAAAACCGTCTTTCTGCG+TGG | + | chr3_1:80957926-80957945 | None:intergenic | 50.0% | |
| AATTGGTGTGGTACGGTAGC+GGG | + | chr3_1:80958101-80958120 | None:intergenic | 50.0% | |
| CCCCACAAATTGGTGTGGTA+CGG | + | chr3_1:80958108-80958127 | None:intergenic | 50.0% | |
| CCGTACCACACCAATTTGTG+GGG | - | chr3_1:80958105-80958124 | Msa0379650:intron | 50.0% | |
| TACCACACCAATTTGTGGGG+TGG | - | chr3_1:80958108-80958127 | Msa0379650:intron | 50.0% | |
| GAATGACAGCATACCTGCTC+AGG | + | chr3_1:80958361-80958380 | None:intergenic | 50.0% | |
| ! | AAGCATACCTGCTCAGGTTG+TGG | + | chr3_1:80958509-80958528 | None:intergenic | 50.0% |
| CGAGTGCCAAAGCCAATGAT+TGG | + | chr3_1:80958710-80958729 | None:intergenic | 50.0% | |
| !! | GTGGTGGTGATGGTAAGTGG+TGG | + | chr3_1:80952047-80952066 | None:intergenic | 55.0% |
| !! | TCGGTGGTGGTGATGGTAAG+TGG | + | chr3_1:80952050-80952069 | None:intergenic | 55.0% |
| TGGAGGTAGTGTTTCGGTGG+TGG | + | chr3_1:80952063-80952082 | None:intergenic | 55.0% | |
| !! | CGGAGACGCGTTTTTCGAAG+TGG | + | chr3_1:80952097-80952116 | None:intergenic | 55.0% |
| GAGGTCGTGGAGATTCGTGA+CGG | + | chr3_1:80952117-80952136 | None:intergenic | 55.0% | |
| GGAAGAGGAAGAAGGTGAGC+GGG | + | chr3_1:80952195-80952214 | None:intergenic | 55.0% | |
| CGGAAGAGGAAGAAGGTGAG+CGG | + | chr3_1:80952196-80952215 | None:intergenic | 55.0% | |
| TTGACACGAGACCTGCTCCA+TGG | - | chr3_1:80952694-80952713 | Msa0379650:intron | 55.0% | |
| !! | CTTCGCCGGAAGCATCTTCA+AGG | + | chr3_1:80953267-80953286 | None:intergenic | 55.0% |
| CTTGAAGATGCTTCCGGCGA+AGG | - | chr3_1:80953265-80953284 | Msa0379650:intron | 55.0% | |
| ATCAAGGACGCTGCTCGTTG+CGG | + | chr3_1:80953773-80953792 | None:intergenic | 55.0% | |
| TTTGGAGGAGTGGGGGAATG+TGG | - | chr3_1:80954877-80954896 | Msa0379650:intron | 55.0% | |
| ! | TGGGGTTCTGATCCAGAGTC+AGG | - | chr3_1:80956756-80956775 | Msa0379650:intron | 55.0% |
| ! | GGGGTTCTGATCCAGAGTCA+GGG | - | chr3_1:80956757-80956776 | Msa0379650:intron | 55.0% |
| TCCAGAGTCAGGGCAAGATG+TGG | - | chr3_1:80956767-80956786 | Msa0379650:intron | 55.0% | |
| ACCACATCTTGCCCTGACTC+TGG | + | chr3_1:80956771-80956790 | None:intergenic | 55.0% | |
| CTACCCCTATGATGCGAAGG+GGG | - | chr3_1:80956928-80956947 | Msa0379650:intron | 55.0% | |
| CATAGTGTCCTAGGGCCAGA+CGG | + | chr3_1:80956954-80956973 | None:intergenic | 55.0% | |
| ! | ATGGGTTAAACGGCGGGTCT+TGG | - | chr3_1:80957131-80957150 | Msa0379650:intron | 55.0% |
| TGGATTGTCCACCTGCAGTG+TGG | - | chr3_1:80957181-80957200 | Msa0379650:intron | 55.0% | |
| AGGTCCTAACAGCAAGGCTG+GGG | + | chr3_1:80957305-80957324 | None:intergenic | 55.0% | |
| CTAGGTCCTAACAGCAAGGC+TGG | + | chr3_1:80957307-80957326 | None:intergenic | 55.0% | |
| !! | CAGCCTTGCTGTTAGGACCT+AGG | - | chr3_1:80957305-80957324 | Msa0379650:CDS | 55.0% |
| GTCCCTAGGTCCTAACAGCA+AGG | + | chr3_1:80957311-80957330 | None:intergenic | 55.0% | |
| TTGATGCAGAGTCCGTCCCT+AGG | + | chr3_1:80957325-80957344 | None:intergenic | 55.0% | |
| GGACTGGGTGACTTTGTGGA+GGG | + | chr3_1:80957744-80957763 | None:intergenic | 55.0% | |
| AGGACTGGGTGACTTTGTGG+AGG | + | chr3_1:80957745-80957764 | None:intergenic | 55.0% | |
| !!! | CGCTTTTTTTCGTCGCGGCT+AGG | + | chr3_1:80957843-80957862 | None:intergenic | 55.0% |
| TGTGTGTGTAGCGGCTGCTT+TGG | + | chr3_1:80957903-80957922 | None:intergenic | 55.0% | |
| TCTGCGTGGTGTGTGTGTAG+CGG | + | chr3_1:80957912-80957931 | None:intergenic | 55.0% | |
| GTCAAAGCGGAAATGTGGCG+CGG | + | chr3_1:80958139-80958158 | None:intergenic | 55.0% | |
| ATGTCAGAATGTGCGGCTGC+TGG | + | chr3_1:80958265-80958284 | None:intergenic | 55.0% | |
| TACTCTTGCGTCACCTGAGC+AGG | - | chr3_1:80958345-80958364 | Msa0379650:intron | 55.0% | |
| ! | TCAGGTTGTGGAAGAGGGTG+CGG | + | chr3_1:80958497-80958516 | None:intergenic | 55.0% |
| ! | CCTGCTCAGGTTGTGGAAGA+GGG | + | chr3_1:80958502-80958521 | None:intergenic | 55.0% |
| ! | ACCTGCTCAGGTTGTGGAAG+AGG | + | chr3_1:80958503-80958522 | None:intergenic | 55.0% |
| TCAGGTCGGTGAGGGTAATG+AGG | - | chr3_1:80958605-80958624 | Msa0379650:intron | 55.0% | |
| AAATGGTGCGGCGGAGAGAG+TGG | + | chr3_1:80952007-80952026 | None:intergenic | 60.0% | |
| AATCGCCGCAGATGAGGTCG+TGG | + | chr3_1:80952130-80952149 | None:intergenic | 60.0% | |
| ! | GAGCGGGAGTGAGAAGGTGT+GGG | + | chr3_1:80952179-80952198 | None:intergenic | 60.0% |
| TGAGCGGGAGTGAGAAGGTG+TGG | + | chr3_1:80952180-80952199 | None:intergenic | 60.0% | |
| GAAGGTGAGCGGGAGTGAGA+AGG | + | chr3_1:80952185-80952204 | None:intergenic | 60.0% | |
| GATGCTTCCGGCGAAGGTGA+AGG | - | chr3_1:80953271-80953290 | Msa0379650:intron | 60.0% | |
| GTCCTGCAAACAGCTCCTGC+TGG | - | chr3_1:80955768-80955787 | Msa0379650:intron | 60.0% | |
| AGCCAGCAGGAGCTGTTTGC+AGG | + | chr3_1:80955773-80955792 | None:intergenic | 60.0% | |
| TGTCACGCGTTTCAGCCAGC+AGG | + | chr3_1:80955786-80955805 | None:intergenic | 60.0% | |
| ACGGCCCCCTTCGCATCATA+GGG | + | chr3_1:80956935-80956954 | None:intergenic | 60.0% | |
| GGTCCTAACAGCAAGGCTGG+GGG | + | chr3_1:80957304-80957323 | None:intergenic | 60.0% | |
| !!! | CGGGCCGCTTTTTTTCGTCG+CGG | + | chr3_1:80957848-80957867 | None:intergenic | 60.0% |
| !!! | CGGTAGCGGGCGCTATTTTG+TGG | + | chr3_1:80958088-80958107 | None:intergenic | 60.0% |
| GGCCACCCCACAAATTGGTG+TGG | + | chr3_1:80958113-80958132 | None:intergenic | 60.0% | |
| ! | GTTGTGGAAGAGGGTGCGGT+TGG | + | chr3_1:80958493-80958512 | None:intergenic | 60.0% |
| CCCTCTTCCACAACCTGAGC+AGG | - | chr3_1:80958499-80958518 | Msa0379650:intron | 60.0% | |
| CGGCCCCCTTCGCATCATAG+GGG | + | chr3_1:80956934-80956953 | None:intergenic | 65.0% | |
| GACGGCCCCCTTCGCATCAT+AGG | + | chr3_1:80956936-80956955 | None:intergenic | 65.0% | |
| ATGATGCGAAGGGGGCCGTC+TGG | - | chr3_1:80956936-80956955 | Msa0379650:intron | 65.0% | |
| !! | GCTCCCCCAGCCTTGCTGTT+AGG | - | chr3_1:80957298-80957317 | Msa0379650:CDS | 65.0% |
| ! | TTCCGCTCCGCTATAGCGGG+CGG | + | chr3_1:80957803-80957822 | None:intergenic | 65.0% |
| CGGCCCGCTATTCAGGAGTG+CGG | - | chr3_1:80957861-80957880 | Msa0379650:CDS | 65.0% | |
| ! | GGCCCGCTATTCAGGAGTGC+GGG | - | chr3_1:80957862-80957881 | Msa0379650:CDS | 65.0% |
| ! | GCCCGCTATTCAGGAGTGCG+GGG | - | chr3_1:80957863-80957882 | Msa0379650:CDS | 65.0% |
| CCCCCGCACTCCTGAATAGC+GGG | + | chr3_1:80957867-80957886 | None:intergenic | 65.0% | |
| ! | CCCGCTATTCAGGAGTGCGG+GGG | - | chr3_1:80957864-80957883 | Msa0379650:CDS | 65.0% |
| CCCCCCGCACTCCTGAATAG+CGG | + | chr3_1:80957868-80957887 | None:intergenic | 65.0% | |
| ! | CCGCTATTCAGGAGTGCGGG+GGG | - | chr3_1:80957865-80957884 | Msa0379650:CDS | 65.0% |
| !! | GCGGGCGCTATTTTGTGGCG+CGG | + | chr3_1:80958083-80958102 | None:intergenic | 65.0% |
| ! | GTGGAAGAGGGTGCGGTTGG+TGG | + | chr3_1:80958490-80958509 | None:intergenic | 65.0% |
| TGGTGCGGCGGAGAGAGTGG+TGG | + | chr3_1:80952004-80952023 | None:intergenic | 70.0% | |
| !! | CTCCGCTATAGCGGGCGGCA+CGG | + | chr3_1:80957798-80957817 | None:intergenic | 70.0% |
| ! | TGCCGCCCGCTATAGCGGAG+CGG | - | chr3_1:80957798-80957817 | Msa0379650:CDS | 70.0% |
| !! | TCGTCGCGGCTAGGAGCGCT+GGG | + | chr3_1:80957834-80957853 | None:intergenic | 70.0% |
| ! | TTCGTCGCGGCTAGGAGCGC+TGG | + | chr3_1:80957835-80957854 | None:intergenic | 70.0% |
| GGCGCGGCCACCCCACAAAT+TGG | + | chr3_1:80958118-80958137 | None:intergenic | 70.0% | |
| AGCGGAAATGTGGCGCGGCG+CGG | + | chr3_1:80958134-80958153 | None:intergenic | 70.0% | |
| GAAGGGGGCCGTCTGGCCCT+AGG | - | chr3_1:80956943-80956962 | Msa0379650:intron | 75.0% | |
| GGCCGTGCCGCCCGCTATAG+CGG | - | chr3_1:80957793-80957812 | Msa0379650:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 80951969 | 80959102 | 80951969 | ID=Msa0379650;Name=Msa0379650 |
| chr3_1 | mRNA | 80951969 | 80959102 | 80951969 | ID=Msa0379650-mRNA-1;Parent=Msa0379650;Name=Msa0379650-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.87|0.77|1|1|1|9|401|427 |
| chr3_1 | exon | 80951969 | 80952462 | 80951969 | ID=Msa0379650-mRNA-1:exon:20286;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80952551 | 80952616 | 80952551 | ID=Msa0379650-mRNA-1:exon:20285;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80952705 | 80952773 | 80952705 | ID=Msa0379650-mRNA-1:exon:20284;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80954067 | 80954172 | 80954067 | ID=Msa0379650-mRNA-1:exon:20283;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80954266 | 80954373 | 80954266 | ID=Msa0379650-mRNA-1:exon:20282;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80957201 | 80957334 | 80957201 | ID=Msa0379650-mRNA-1:exon:20281;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80957448 | 80957531 | 80957448 | ID=Msa0379650-mRNA-1:exon:20280;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80957627 | 80957971 | 80957627 | ID=Msa0379650-mRNA-1:exon:20279;Parent=Msa0379650-mRNA-1 |
| chr3_1 | exon | 80958824 | 80959102 | 80958824 | ID=Msa0379650-mRNA-1:exon:20278;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80958824 | 80959102 | 80958824 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80957627 | 80957971 | 80957627 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80957448 | 80957531 | 80957448 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80957201 | 80957334 | 80957201 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80954266 | 80954373 | 80954266 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80954067 | 80954172 | 80954067 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80952705 | 80952773 | 80952705 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80952551 | 80952616 | 80952551 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | CDS | 80952370 | 80952462 | 80952370 | ID=Msa0379650-mRNA-1:cds;Parent=Msa0379650-mRNA-1 |
| chr3_1 | three_prime_UTR | 80951969 | 80952369 | 80951969 | ID=Msa0379650-mRNA-1:three_prime_utr;Parent=Msa0379650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
