AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376630 MtrunA17_Chr3g0127201 96.587 293 6 3 17 308 1 290 0.0 572
Msa0376630 MtrunA17_Chr8g0346551 48.322 298 119 14 17 308 1 269 1.72e-71 222
Msa0376630 MtrunA17_Chr1g0188851 43.831 308 116 16 1 299 1 260 7.35e-56 182
Msa0376630 MtrunA17_Chr2g0326001 86.364 66 9 0 32 97 29 94 5.18e-37 134
Msa0376630 MtrunA17_Chr3g0117601 33.333 333 162 12 5 308 17 318 1.33e-36 134
Msa0376630 MtrunA17_Chr4g0010151 50.000 140 56 3 28 163 63 192 1.05e-33 126
Msa0376630 MtrunA17_Chr4g0030051 56.897 116 49 1 32 147 30 144 3.98e-33 123
Msa0376630 MtrunA17_Chr3g0126201 61.798 89 30 1 13 97 17 105 5.00e-32 121
Msa0376630 MtrunA17_Chr4g0031411 50.769 130 54 3 28 149 56 183 1.57e-31 120
Msa0376630 MtrunA17_Chr2g0328021 68.354 79 22 1 32 107 51 129 5.47e-31 117
Msa0376630 MtrunA17_Chr8g0367161 67.568 74 24 0 32 105 21 94 6.60e-31 118
Msa0376630 MtrunA17_Chr7g0223311 53.774 106 44 1 11 111 40 145 6.82e-30 116
Msa0376630 MtrunA17_Chr1g0177251 87.037 54 7 0 44 97 13 66 3.24e-29 113
Msa0376630 MtrunA17_Chr8g0374251 76.271 59 14 0 38 96 63 121 4.08e-29 114
Msa0376630 MtrunA17_Chr4g0047001 50.000 122 44 3 45 164 57 163 6.32e-29 114
Msa0376630 MtrunA17_Chr7g0237921 64.865 74 22 1 28 97 57 130 1.06e-28 112
Msa0376630 MtrunA17_Chr8g0374111 58.974 78 31 1 33 109 18 95 4.91e-28 108
Msa0376630 MtrunA17_Chr2g0282441 70.769 65 14 1 30 94 17 76 5.63e-28 110
Msa0376630 MtrunA17_Chr3g0092111 53.763 93 40 1 32 124 125 214 8.09e-28 112
Msa0376630 MtrunA17_Chr8g0341671 71.212 66 17 2 37 101 15 79 1.87e-27 106
Msa0376630 MtrunA17_Chr5g0411951 77.778 54 12 0 40 93 40 93 5.15e-27 108
Msa0376630 MtrunA17_Chr2g0282511 58.427 89 27 1 3 91 15 93 6.98e-27 107
Msa0376630 MtrunA17_Chr4g0047761 65.789 76 21 2 26 97 51 125 8.09e-27 107
Msa0376630 MtrunA17_Chr2g0308011 86.000 50 7 0 42 91 36 85 8.68e-27 104
Msa0376630 MtrunA17_Chr2g0282051 70.149 67 17 2 33 97 34 99 1.45e-26 105
Msa0376630 MtrunA17_Chr4g0042481 58.904 73 30 0 29 101 108 180 2.63e-26 107
Msa0376630 MtrunA17_Chr6g0453321 52.688 93 37 1 8 100 108 193 4.55e-26 107
Msa0376630 MtrunA17_Chr4g0061761 77.358 53 12 0 41 93 38 90 4.72e-26 105
Msa0376630 MtrunA17_Chr7g0217581 64.179 67 24 0 34 100 223 289 6.39e-26 107
Msa0376630 MtrunA17_Chr8g0355261 59.701 67 27 0 32 98 107 173 1.87e-25 105
Msa0376630 MtrunA17_Chr7g0254161 56.098 82 32 1 23 100 77 158 2.19e-25 105
Msa0376630 MtrunA17_Chr5g0417571 59.155 71 29 0 30 100 125 195 2.64e-25 103
Msa0376630 MtrunA17_Chr6g0460721 55.405 74 33 0 27 100 73 146 1.78e-24 101
Msa0376630 MtrunA17_Chr2g0283811 64.912 57 20 0 40 96 44 100 5.34e-24 95.9
Msa0376630 MtrunA17_Chr6g0460731 47.872 94 47 1 27 118 80 173 7.23e-24 100
Msa0376630 MtrunA17_Chr5g0417601 58.209 67 28 0 30 96 127 193 1.19e-22 96.7
Msa0376630 MtrunA17_Chr5g0417551 46.875 96 51 0 10 105 94 189 9.30e-22 94.4
Msa0376630 MtrunA17_Chr5g0417561 63.492 63 23 0 43 105 119 181 1.46e-21 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376630 AT3G61850.4 38.095 357 139 15 1 308 1 324 1.14e-57 188
Msa0376630 AT3G61850.5 41.554 296 124 13 29 308 50 312 4.59e-56 184
Msa0376630 AT3G61850.1 38.506 348 122 15 1 308 1 296 1.32e-54 180
Msa0376630 AT3G61850.2 42.160 287 107 13 29 308 50 284 2.97e-53 176
Msa0376630 AT3G61850.3 42.160 287 107 13 29 308 50 284 2.97e-53 176
Msa0376630 AT4G24060.1 37.464 347 172 11 1 308 1 341 1.53e-48 165
Msa0376630 AT2G46590.1 40.413 339 130 18 17 308 44 357 7.12e-44 154
Msa0376630 AT2G46590.2 40.708 339 129 19 17 308 56 369 9.17e-44 154
Msa0376630 AT1G64620.1 37.571 354 154 15 1 303 1 338 2.97e-43 152
Msa0376630 AT5G60200.1 57.391 115 40 2 9 114 12 126 1.79e-37 134
Msa0376630 AT3G55370.1 71.951 82 18 2 29 106 59 139 8.53e-34 126
Msa0376630 AT3G55370.3 71.951 82 18 2 29 106 104 184 1.06e-33 127
Msa0376630 AT3G55370.2 71.951 82 18 2 29 106 59 139 1.12e-33 126
Msa0376630 AT2G28510.1 51.538 130 42 3 41 150 46 174 2.21e-33 124
Msa0376630 AT5G60850.1 70.270 74 22 0 41 114 49 122 4.88e-32 121
Msa0376630 AT3G45610.1 56.863 102 41 2 1 102 1 99 6.10e-32 119
Msa0376630 AT4G00940.1 60.185 108 35 2 30 131 57 162 1.01e-31 120
Msa0376630 AT4G00940.3 60.185 108 35 2 30 131 57 162 1.01e-31 120
Msa0376630 AT4G00940.2 60.185 108 35 2 30 131 57 162 1.01e-31 120
Msa0376630 AT1G51700.1 71.831 71 18 2 37 106 28 97 3.34e-30 113
Msa0376630 AT5G65590.1 60.227 88 30 1 16 103 19 101 4.14e-30 116
Msa0376630 AT2G37590.1 67.123 73 21 1 29 98 72 144 1.16e-29 115
Msa0376630 AT5G62940.1 77.049 61 14 0 33 93 63 123 1.28e-29 116
Msa0376630 AT3G52440.1 82.759 58 10 0 45 102 27 84 2.14e-29 112
Msa0376630 AT3G52440.2 82.759 58 10 0 45 102 46 103 2.68e-29 113
Msa0376630 AT5G02460.1 66.216 74 21 1 28 97 76 149 4.05e-29 115
Msa0376630 AT1G21340.1 81.034 58 11 0 45 102 40 97 1.41e-28 110
Msa0376630 AT3G21270.1 84.906 53 8 0 43 95 29 81 2.54e-28 108
Msa0376630 AT1G28310.1 81.818 55 10 0 43 97 27 81 5.47e-28 110
Msa0376630 AT1G28310.2 81.818 55 10 0 43 97 51 105 7.89e-28 110
Msa0376630 AT1G07640.1 65.278 72 22 1 29 97 4 75 1.22e-27 108
Msa0376630 AT1G07640.2 65.278 72 22 1 29 97 60 131 1.23e-27 110
Msa0376630 AT1G07640.3 65.278 72 22 1 29 97 68 139 1.49e-27 110
Msa0376630 AT5G66940.1 67.606 71 21 2 38 107 28 97 2.47e-27 106
Msa0376630 AT4G38000.1 60.526 76 29 1 22 96 20 95 2.91e-27 107
Msa0376630 AT2G28810.2 67.188 64 20 1 31 94 66 128 8.22e-27 107
Msa0376630 AT2G28810.1 67.188 64 20 1 31 94 83 145 1.19e-26 107
Msa0376630 AT3G50410.1 72.308 65 15 2 37 98 22 86 1.46e-26 105
Msa0376630 AT4G21050.1 71.875 64 17 1 45 108 26 88 3.07e-26 103
Msa0376630 AT1G47655.1 58.974 78 30 1 17 92 1 78 7.20e-26 102
Msa0376630 AT1G69570.1 67.742 62 20 0 35 96 124 185 3.49e-25 104
Msa0376630 AT5G39660.3 66.667 63 21 0 38 100 133 195 3.85e-25 105
Msa0376630 AT5G39660.1 66.667 63 21 0 38 100 133 195 3.85e-25 105
Msa0376630 AT5G39660.2 66.667 63 21 0 38 100 133 195 3.85e-25 105
Msa0376630 AT4G21040.1 67.188 64 19 1 45 108 27 88 6.00e-25 100
Msa0376630 AT3G47500.1 68.333 60 19 0 41 100 108 167 6.21e-25 104
Msa0376630 AT2G34140.1 62.903 62 23 0 35 96 50 111 9.99e-25 98.2
Msa0376630 AT1G26790.1 70.175 57 17 0 40 96 108 164 1.11e-24 102
Msa0376630 AT1G29160.1 55.844 77 32 1 20 96 41 115 1.13e-24 98.2
Msa0376630 AT5G62430.1 62.903 62 23 0 41 102 52 113 2.76e-24 100
Msa0376630 AT4G21080.1 49.425 87 32 2 45 121 27 111 1.75e-23 97.1
Msa0376630 AT4G21030.1 49.333 75 32 1 45 119 23 91 1.04e-14 71.6

Find 74 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGGTTATTATTATTTA+TGG 0.111949 3_1:+76741461 Msa0376630:three_prime_UTR
TCTTGTCCTTGATGGATCTT+AGG 0.169048 3_1:-76740747 None:intergenic
TTTAAGCTTGGGGTTAATTT+TGG 0.185562 3_1:+76740987 Msa0376630:CDS
TGTTCAAACTCACCACTATT+TGG 0.210892 3_1:-76741164 None:intergenic
ATCAGAACCACTAACAAAAT+AGG 0.243615 3_1:+76741436 Msa0376630:three_prime_UTR
TAAAATAAAATAAAATTAAA+AGG 0.254787 3_1:-76741330 None:intergenic
GGGAGTGGAAGTTTGAAATT+TGG 0.300326 3_1:+76741403 Msa0376630:three_prime_UTR
AAGGTGATTCTACTGGTTAT+TGG 0.303787 3_1:+76741204 Msa0376630:CDS
GAAGGGTTTGAGAATGGTTA+TGG 0.323309 3_1:+76741014 Msa0376630:CDS
GGTTAAGATCTTGTCCTTGA+TGG 0.347085 3_1:-76740755 None:intergenic
GCAAAACTTGTAGAAGGTAT+TGG 0.349440 3_1:+76740538 Msa0376630:CDS
GGTTCTGCTGGTGGTGGTGG+TGG 0.365919 3_1:+76741065 Msa0376630:CDS
TATTGGATTGGTTAAACAAA+TGG 0.368626 3_1:+76740359 Msa0376630:CDS
GAGGGTTCTGCTGGTGGTGG+TGG 0.372229 3_1:+76741062 Msa0376630:CDS
CTTGTCCTTGATGGATCTTA+GGG 0.390118 3_1:-76740746 None:intergenic
TGGAGGATCATGGTAGATAA+TGG 0.412082 3_1:+76741241 Msa0376630:exon
TGAAAACTGCTTCTTCATCA+AGG 0.432756 3_1:+76740886 Msa0376630:CDS
AAGCTCAATGAATTTAGATA+TGG 0.438747 3_1:-76740817 None:intergenic
TCAGAACCACTAACAAAATA+GGG 0.443039 3_1:+76741437 Msa0376630:three_prime_UTR
AACTGATGATCATCTACAAC+AGG 0.454576 3_1:-76741116 None:intergenic
TTGTCTTGATCAGTTGTGTA+AGG 0.463233 3_1:-76740840 None:intergenic
GGTTTAGAAGGGTTTGAGAA+TGG 0.472180 3_1:+76741008 Msa0376630:CDS
CTCTCTAACATAGAAGGTGT+TGG 0.476502 3_1:-76740405 None:intergenic
AATTTAGGGGAATATTGGAT+TGG 0.478716 3_1:+76740347 Msa0376630:intron
GATTCTACTGGTTATTGGAA+TGG 0.482077 3_1:+76741209 Msa0376630:CDS
CTAGACTCAGACAAAGTCAT+AGG 0.485051 3_1:-76740927 None:intergenic
GAAAACTGCTTCTTCATCAA+GGG 0.488666 3_1:+76740887 Msa0376630:CDS
CAGCAACAAATTCCAAATAG+TGG 0.488831 3_1:+76741152 Msa0376630:CDS
TAATTATCCTCAGTTGTTTG+TGG 0.490761 3_1:-76740789 None:intergenic
CAAGAGGGTTCTGCTGGTGG+TGG 0.493771 3_1:+76741059 Msa0376630:CDS
TTGTTTGTGGTGGATAAGCT+AGG 0.500159 3_1:-76740776 None:intergenic
TTTCTTGAACCACCACCTAC+AGG 0.506879 3_1:-76740588 None:intergenic
AGGTTATTATTATTTATGGA+TGG 0.508477 3_1:+76741465 Msa0376630:three_prime_UTR
AGAAATGTTCCTGTAGGTGG+TGG 0.516507 3_1:+76740579 Msa0376630:CDS
AATGGTTATGGTGGCTTGCA+AGG 0.516585 3_1:+76741026 Msa0376630:CDS
AATAATCAAGAGGGTTCTGC+TGG 0.524023 3_1:+76741053 Msa0376630:CDS
TCTTTAAGAAATGTTCCTGT+AGG 0.524165 3_1:+76740573 Msa0376630:CDS
GTGAAGAAAGTGATAAACAA+GGG 0.528045 3_1:+76741281 Msa0376630:three_prime_UTR
GAATGTTCGGTGGAGGATCA+TGG 0.528349 3_1:+76741231 Msa0376630:CDS
TTATCCTCAGTTGTTTGTGG+TGG 0.529976 3_1:-76740786 None:intergenic
TTAAGAAATGTTCCTGTAGG+TGG 0.533560 3_1:+76740576 Msa0376630:CDS
AGACAAAACTACAAGTGCTA+TGG 0.533697 3_1:+76740857 Msa0376630:CDS
AGAACTCAAGGTGATTCTAC+TGG 0.537114 3_1:+76741197 Msa0376630:CDS
ACTAACAAAATAGGGTACAT+AGG 0.541218 3_1:+76741445 Msa0376630:three_prime_UTR
CATCAGCAAAATAGAACTCA+AGG 0.544205 3_1:+76741185 Msa0376630:CDS
ATCTATGGACACAGCTCAGT+GGG 0.545119 3_1:+76739909 Msa0376630:exon
GGTTATTGGAATGGAATGTT+CGG 0.551153 3_1:+76741218 Msa0376630:CDS
GGATTGGTTAAACAAATGGA+TGG 0.552908 3_1:+76740363 Msa0376630:CDS
TGGAATGGAATGTTCGGTGG+AGG 0.558324 3_1:+76741224 Msa0376630:CDS
ATCAAGCTTTAAACTGTCCA+AGG 0.561852 3_1:+76740448 Msa0376630:CDS
GGGTTTGAGAATGGTTATGG+TGG 0.564934 3_1:+76741017 Msa0376630:CDS
AAAACTGCTTCTTCATCAAG+GGG 0.565168 3_1:+76740888 Msa0376630:CDS
AGTGCAATGTATAATTCAAG+TGG 0.566445 3_1:+76740948 Msa0376630:CDS
CAAAACCCTAAGATCCATCA+AGG 0.571674 3_1:+76740741 Msa0376630:CDS
TATTGGAATGGAATGTTCGG+TGG 0.576421 3_1:+76741221 Msa0376630:CDS
CAAGGGATTAATAATCAAGA+GGG 0.577580 3_1:+76741044 Msa0376630:CDS
GCAAGGGATTAATAATCAAG+AGG 0.579146 3_1:+76741043 Msa0376630:CDS
ATGGTTATGGTGGCTTGCAA+GGG 0.581200 3_1:+76741027 Msa0376630:CDS
TGTAGAAGGTATTGGACTGA+AGG 0.583395 3_1:+76740546 Msa0376630:CDS
AAAAGTACCTTGGTTGTGAG+AGG 0.583488 3_1:-76740515 None:intergenic
GGTTGTGATTGTGAGATTGA+AGG 0.587222 3_1:-76740639 None:intergenic
AATCAAGAGGGTTCTGCTGG+TGG 0.591602 3_1:+76741056 Msa0376630:CDS
AGAAGGTATTGGACTGAAGG+TGG 0.592159 3_1:+76740549 Msa0376630:CDS
GAAAGTGATAAACAAGGGGT+TGG 0.599924 3_1:+76741286 Msa0376630:three_prime_UTR
GGACACAGCTCAGTGGGCAC+AGG 0.600044 3_1:+76739915 Msa0376630:CDS
GAATTGGAATATAGTAGTAG+TGG 0.605552 3_1:-76739762 None:intergenic
AGTGAAGAAAGTGATAAACA+AGG 0.620571 3_1:+76741280 Msa0376630:three_prime_UTR
GATTGAAGGTGATGATGATG+AGG 0.631503 3_1:-76740625 None:intergenic
TGAAGAAAGTGATAAACAAG+GGG 0.647930 3_1:+76741282 Msa0376630:three_prime_UTR
ACTATAGCCTCTCACAACCA+AGG 0.671979 3_1:+76740508 Msa0376630:CDS
GTGTTAGTTGAATTGCACCT+TGG 0.675503 3_1:-76740465 None:intergenic
AATCTATGGACACAGCTCAG+TGG 0.676107 3_1:+76739908 Msa0376630:exon
TTATCCACCACAAACAACTG+AGG 0.701982 3_1:+76740782 Msa0376630:CDS
CTATGTTAGAGAGAAAAGCA+AGG 0.712069 3_1:+76740415 Msa0376630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATAAAATTAAA+AGG - chr3_1:76741333-76741352 None:intergenic 0.0%
!! TAAAATAAAATAAAATTAAA+AGG - chr3_1:76741333-76741352 None:intergenic 0.0%
!! AAGTATATAAGAAATAATAA+AGG - chr3_1:76740306-76740325 None:intergenic 10.0%
!!! ATTATTTTTGAAAAATTTAG+GGG + chr3_1:76740334-76740353 Msa0376630:intron 10.0%
!! AAGTATATAAGAAATAATAA+AGG - chr3_1:76740306-76740325 None:intergenic 10.0%
!!! ATTATTTTTGAAAAATTTAG+GGG + chr3_1:76740334-76740353 Msa0376630:intron 10.0%
!! TGATACATAAAACTTTATTA+TGG - chr3_1:76740025-76740044 None:intergenic 15.0%
!! GAAGAAAAAAATAAATGAAA+AGG - chr3_1:76740165-76740184 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG - chr3_1:76740666-76740685 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG + chr3_1:76741461-76741480 Msa0376630:three_prime_UTR 15.0%
!! TGATACATAAAACTTTATTA+TGG - chr3_1:76740025-76740044 None:intergenic 15.0%
!! GAAGAAAAAAATAAATGAAA+AGG - chr3_1:76740165-76740184 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG - chr3_1:76740666-76740685 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG + chr3_1:76741461-76741480 Msa0376630:three_prime_UTR 15.0%
!! TAAGAAGAAAAATGGAAAAA+AGG - chr3_1:76739888-76739907 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG - chr3_1:76739896-76739915 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG + chr3_1:76739894-76739913 Msa0376630:exon 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG - chr3_1:76739970-76739989 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG - chr3_1:76740116-76740135 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG - chr3_1:76740221-76740240 None:intergenic 20.0%
!!! TTTTTCTCATCTTTATCTTT+TGG + chr3_1:76741372-76741391 Msa0376630:three_prime_UTR 20.0%
!! AGGTTATTATTATTTATGGA+TGG + chr3_1:76741465-76741484 Msa0376630:three_prime_UTR 20.0%
!! TAAGAAGAAAAATGGAAAAA+AGG - chr3_1:76739888-76739907 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG - chr3_1:76739896-76739915 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG + chr3_1:76739894-76739913 Msa0376630:exon 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG - chr3_1:76739970-76739989 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG - chr3_1:76740116-76740135 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG - chr3_1:76740221-76740240 None:intergenic 20.0%
!!! TTTTTCTCATCTTTATCTTT+TGG + chr3_1:76741372-76741391 Msa0376630:three_prime_UTR 20.0%
!! AGGTTATTATTATTTATGGA+TGG + chr3_1:76741465-76741484 Msa0376630:three_prime_UTR 20.0%
! TCTAGAAACTAGAAAAAAGT+GGG + chr3_1:76739825-76739844 Msa0376630:five_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG - chr3_1:76739882-76739901 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG + chr3_1:76740053-76740072 Msa0376630:intron 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG - chr3_1:76740222-76740241 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG - chr3_1:76740291-76740310 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG + chr3_1:76740342-76740361 Msa0376630:intron 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG + chr3_1:76740359-76740378 Msa0376630:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG - chr3_1:76740441-76740460 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG - chr3_1:76740663-76740682 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG - chr3_1:76740820-76740839 None:intergenic 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG + chr3_1:76741380-76741399 Msa0376630:three_prime_UTR 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG + chr3_1:76741381-76741400 Msa0376630:three_prime_UTR 25.0%
! TCTAGAAACTAGAAAAAAGT+GGG + chr3_1:76739825-76739844 Msa0376630:five_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG - chr3_1:76739882-76739901 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG + chr3_1:76740053-76740072 Msa0376630:intron 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG - chr3_1:76740222-76740241 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG - chr3_1:76740291-76740310 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG + chr3_1:76740342-76740361 Msa0376630:intron 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG + chr3_1:76740359-76740378 Msa0376630:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG - chr3_1:76740441-76740460 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG - chr3_1:76740663-76740682 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG - chr3_1:76740820-76740839 None:intergenic 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG + chr3_1:76741380-76741399 Msa0376630:three_prime_UTR 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG + chr3_1:76741381-76741400 Msa0376630:three_prime_UTR 25.0%
GAATTGGAATATAGTAGTAG+TGG - chr3_1:76739765-76739784 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG - chr3_1:76739826-76739845 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG + chr3_1:76739824-76739843 Msa0376630:five_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG - chr3_1:76739952-76739971 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG - chr3_1:76740110-76740129 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG - chr3_1:76740210-76740229 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG + chr3_1:76740347-76740366 Msa0376630:intron 30.0%
! ACTTTTGCAAAACTTGTAGA+AGG + chr3_1:76740532-76740551 Msa0376630:CDS 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG + chr3_1:76740573-76740592 Msa0376630:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG - chr3_1:76740792-76740811 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG + chr3_1:76740948-76740967 Msa0376630:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG + chr3_1:76740976-76740995 Msa0376630:CDS 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG + chr3_1:76740977-76740996 Msa0376630:CDS 30.0%
! TTTAAGCTTGGGGTTAATTT+TGG + chr3_1:76740987-76741006 Msa0376630:CDS 30.0%
!!! GGGTTAATTTTGGTTTAGAA+GGG + chr3_1:76740997-76741016 Msa0376630:CDS 30.0%
CAAGGGATTAATAATCAAGA+GGG + chr3_1:76741044-76741063 Msa0376630:CDS 30.0%
AGTGAAGAAAGTGATAAACA+AGG + chr3_1:76741280-76741299 Msa0376630:three_prime_UTR 30.0%
GTGAAGAAAGTGATAAACAA+GGG + chr3_1:76741281-76741300 Msa0376630:three_prime_UTR 30.0%
TGAAGAAAGTGATAAACAAG+GGG + chr3_1:76741282-76741301 Msa0376630:three_prime_UTR 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG + chr3_1:76741382-76741401 Msa0376630:three_prime_UTR 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG + chr3_1:76741383-76741402 Msa0376630:three_prime_UTR 30.0%
ATCAGAACCACTAACAAAAT+AGG + chr3_1:76741436-76741455 Msa0376630:three_prime_UTR 30.0%
TCAGAACCACTAACAAAATA+GGG + chr3_1:76741437-76741456 Msa0376630:three_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG - chr3_1:76741446-76741465 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG + chr3_1:76741445-76741464 Msa0376630:three_prime_UTR 30.0%
GAATTGGAATATAGTAGTAG+TGG - chr3_1:76739765-76739784 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG - chr3_1:76739826-76739845 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG + chr3_1:76739824-76739843 Msa0376630:five_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG - chr3_1:76739952-76739971 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG - chr3_1:76740110-76740129 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG - chr3_1:76740210-76740229 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG + chr3_1:76740347-76740366 Msa0376630:intron 30.0%
! ACTTTTGCAAAACTTGTAGA+AGG + chr3_1:76740532-76740551 Msa0376630:CDS 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG + chr3_1:76740573-76740592 Msa0376630:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG - chr3_1:76740792-76740811 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG + chr3_1:76740948-76740967 Msa0376630:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG + chr3_1:76740976-76740995 Msa0376630:CDS 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG + chr3_1:76740977-76740996 Msa0376630:CDS 30.0%
! TTTAAGCTTGGGGTTAATTT+TGG + chr3_1:76740987-76741006 Msa0376630:CDS 30.0%
!!! GGGTTAATTTTGGTTTAGAA+GGG + chr3_1:76740997-76741016 Msa0376630:CDS 30.0%
CAAGGGATTAATAATCAAGA+GGG + chr3_1:76741044-76741063 Msa0376630:CDS 30.0%
AGTGAAGAAAGTGATAAACA+AGG + chr3_1:76741280-76741299 Msa0376630:three_prime_UTR 30.0%
GTGAAGAAAGTGATAAACAA+GGG + chr3_1:76741281-76741300 Msa0376630:three_prime_UTR 30.0%
TGAAGAAAGTGATAAACAAG+GGG + chr3_1:76741282-76741301 Msa0376630:three_prime_UTR 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG + chr3_1:76741382-76741401 Msa0376630:three_prime_UTR 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG + chr3_1:76741383-76741402 Msa0376630:three_prime_UTR 30.0%
ATCAGAACCACTAACAAAAT+AGG + chr3_1:76741436-76741455 Msa0376630:three_prime_UTR 30.0%
TCAGAACCACTAACAAAATA+GGG + chr3_1:76741437-76741456 Msa0376630:three_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG - chr3_1:76741446-76741465 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG + chr3_1:76741445-76741464 Msa0376630:three_prime_UTR 30.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG - chr3_1:76739781-76739800 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG - chr3_1:76739787-76739806 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG - chr3_1:76740096-76740115 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG + chr3_1:76740363-76740382 Msa0376630:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG - chr3_1:76740414-76740433 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG + chr3_1:76740415-76740434 Msa0376630:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG + chr3_1:76740448-76740467 Msa0376630:CDS 35.0%
!!! CAAGTTTTGCAAAAGTACCT+TGG - chr3_1:76740528-76740547 None:intergenic 35.0%
! GCAAAACTTGTAGAAGGTAT+TGG + chr3_1:76740538-76740557 Msa0376630:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG + chr3_1:76740576-76740595 Msa0376630:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG - chr3_1:76740843-76740862 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG + chr3_1:76740857-76740876 Msa0376630:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG + chr3_1:76740886-76740905 Msa0376630:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG + chr3_1:76740887-76740906 Msa0376630:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG + chr3_1:76740888-76740907 Msa0376630:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG + chr3_1:76740975-76740994 Msa0376630:CDS 35.0%
!!! GGGGTTAATTTTGGTTTAGA+AGG + chr3_1:76740996-76741015 Msa0376630:CDS 35.0%
GCAAGGGATTAATAATCAAG+AGG + chr3_1:76741043-76741062 Msa0376630:CDS 35.0%
AACTGATGATCATCTACAAC+AGG - chr3_1:76741119-76741138 None:intergenic 35.0%
CAGCAACAAATTCCAAATAG+TGG + chr3_1:76741152-76741171 Msa0376630:CDS 35.0%
TGTTCAAACTCACCACTATT+TGG - chr3_1:76741167-76741186 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG + chr3_1:76741185-76741204 Msa0376630:CDS 35.0%
! AAGGTGATTCTACTGGTTAT+TGG + chr3_1:76741204-76741223 Msa0376630:CDS 35.0%
! GATTCTACTGGTTATTGGAA+TGG + chr3_1:76741209-76741228 Msa0376630:CDS 35.0%
GGTTATTGGAATGGAATGTT+CGG + chr3_1:76741218-76741237 Msa0376630:CDS 35.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG - chr3_1:76739781-76739800 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG - chr3_1:76739787-76739806 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG - chr3_1:76740096-76740115 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG + chr3_1:76740363-76740382 Msa0376630:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG - chr3_1:76740414-76740433 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG + chr3_1:76740415-76740434 Msa0376630:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG + chr3_1:76740448-76740467 Msa0376630:CDS 35.0%
!!! CAAGTTTTGCAAAAGTACCT+TGG - chr3_1:76740528-76740547 None:intergenic 35.0%
! GCAAAACTTGTAGAAGGTAT+TGG + chr3_1:76740538-76740557 Msa0376630:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG + chr3_1:76740576-76740595 Msa0376630:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG - chr3_1:76740843-76740862 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG + chr3_1:76740857-76740876 Msa0376630:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG + chr3_1:76740886-76740905 Msa0376630:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG + chr3_1:76740887-76740906 Msa0376630:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG + chr3_1:76740888-76740907 Msa0376630:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG + chr3_1:76740975-76740994 Msa0376630:CDS 35.0%
!!! GGGGTTAATTTTGGTTTAGA+AGG + chr3_1:76740996-76741015 Msa0376630:CDS 35.0%
GCAAGGGATTAATAATCAAG+AGG + chr3_1:76741043-76741062 Msa0376630:CDS 35.0%
AACTGATGATCATCTACAAC+AGG - chr3_1:76741119-76741138 None:intergenic 35.0%
CAGCAACAAATTCCAAATAG+TGG + chr3_1:76741152-76741171 Msa0376630:CDS 35.0%
TGTTCAAACTCACCACTATT+TGG - chr3_1:76741167-76741186 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG + chr3_1:76741185-76741204 Msa0376630:CDS 35.0%
! AAGGTGATTCTACTGGTTAT+TGG + chr3_1:76741204-76741223 Msa0376630:CDS 35.0%
! GATTCTACTGGTTATTGGAA+TGG + chr3_1:76741209-76741228 Msa0376630:CDS 35.0%
GGTTATTGGAATGGAATGTT+CGG + chr3_1:76741218-76741237 Msa0376630:CDS 35.0%
TCTTGGGAAAAAGAAAGGTG+TGG - chr3_1:76740205-76740224 None:intergenic 40.0%
! CTCTCTAACATAGAAGGTGT+TGG - chr3_1:76740408-76740427 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG - chr3_1:76740468-76740487 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG - chr3_1:76740518-76740537 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr3_1:76740546-76740565 Msa0376630:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG - chr3_1:76740628-76740647 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG - chr3_1:76740642-76740661 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG - chr3_1:76740699-76740718 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG - chr3_1:76740728-76740747 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG + chr3_1:76740741-76740760 Msa0376630:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG - chr3_1:76740749-76740768 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG - chr3_1:76740750-76740769 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG - chr3_1:76740758-76740777 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG - chr3_1:76740779-76740798 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG + chr3_1:76740782-76740801 Msa0376630:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG - chr3_1:76740789-76740808 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG - chr3_1:76740930-76740949 None:intergenic 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG + chr3_1:76741008-76741027 Msa0376630:CDS 40.0%
GAAGGGTTTGAGAATGGTTA+TGG + chr3_1:76741014-76741033 Msa0376630:CDS 40.0%
AATAATCAAGAGGGTTCTGC+TGG + chr3_1:76741053-76741072 Msa0376630:CDS 40.0%
AGAACTCAAGGTGATTCTAC+TGG + chr3_1:76741197-76741216 Msa0376630:CDS 40.0%
TATTGGAATGGAATGTTCGG+TGG + chr3_1:76741221-76741240 Msa0376630:CDS 40.0%
TGGAGGATCATGGTAGATAA+TGG + chr3_1:76741241-76741260 Msa0376630:exon 40.0%
GAAAGTGATAAACAAGGGGT+TGG + chr3_1:76741286-76741305 Msa0376630:three_prime_UTR 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG + chr3_1:76741403-76741422 Msa0376630:three_prime_UTR 40.0%
TCTTGGGAAAAAGAAAGGTG+TGG - chr3_1:76740205-76740224 None:intergenic 40.0%
! CTCTCTAACATAGAAGGTGT+TGG - chr3_1:76740408-76740427 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG - chr3_1:76740468-76740487 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG - chr3_1:76740518-76740537 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr3_1:76740546-76740565 Msa0376630:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG - chr3_1:76740628-76740647 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG - chr3_1:76740642-76740661 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG - chr3_1:76740699-76740718 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG - chr3_1:76740728-76740747 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG + chr3_1:76740741-76740760 Msa0376630:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG - chr3_1:76740749-76740768 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG - chr3_1:76740750-76740769 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG - chr3_1:76740758-76740777 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG - chr3_1:76740779-76740798 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG + chr3_1:76740782-76740801 Msa0376630:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG - chr3_1:76740789-76740808 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG - chr3_1:76740930-76740949 None:intergenic 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG + chr3_1:76741008-76741027 Msa0376630:CDS 40.0%
GAAGGGTTTGAGAATGGTTA+TGG + chr3_1:76741014-76741033 Msa0376630:CDS 40.0%
AATAATCAAGAGGGTTCTGC+TGG + chr3_1:76741053-76741072 Msa0376630:CDS 40.0%
AGAACTCAAGGTGATTCTAC+TGG + chr3_1:76741197-76741216 Msa0376630:CDS 40.0%
TATTGGAATGGAATGTTCGG+TGG + chr3_1:76741221-76741240 Msa0376630:CDS 40.0%
TGGAGGATCATGGTAGATAA+TGG + chr3_1:76741241-76741260 Msa0376630:exon 40.0%
GAAAGTGATAAACAAGGGGT+TGG + chr3_1:76741286-76741305 Msa0376630:three_prime_UTR 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG + chr3_1:76741403-76741422 Msa0376630:three_prime_UTR 40.0%
AATCTATGGACACAGCTCAG+TGG + chr3_1:76739908-76739927 Msa0376630:exon 45.0%
ATCTATGGACACAGCTCAGT+GGG + chr3_1:76739909-76739928 Msa0376630:exon 45.0%
ACTATAGCCTCTCACAACCA+AGG + chr3_1:76740508-76740527 Msa0376630:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG + chr3_1:76740549-76740568 Msa0376630:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG + chr3_1:76740579-76740598 Msa0376630:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG - chr3_1:76740591-76740610 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG - chr3_1:76740729-76740748 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG + chr3_1:76741017-76741036 Msa0376630:CDS 45.0%
! AATGGTTATGGTGGCTTGCA+AGG + chr3_1:76741026-76741045 Msa0376630:CDS 45.0%
! ATGGTTATGGTGGCTTGCAA+GGG + chr3_1:76741027-76741046 Msa0376630:CDS 45.0%
AATCTATGGACACAGCTCAG+TGG + chr3_1:76739908-76739927 Msa0376630:exon 45.0%
ATCTATGGACACAGCTCAGT+GGG + chr3_1:76739909-76739928 Msa0376630:exon 45.0%
ACTATAGCCTCTCACAACCA+AGG + chr3_1:76740508-76740527 Msa0376630:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG + chr3_1:76740549-76740568 Msa0376630:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG + chr3_1:76740579-76740598 Msa0376630:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG - chr3_1:76740591-76740610 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG - chr3_1:76740729-76740748 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG + chr3_1:76741017-76741036 Msa0376630:CDS 45.0%
! AATGGTTATGGTGGCTTGCA+AGG + chr3_1:76741026-76741045 Msa0376630:CDS 45.0%
! ATGGTTATGGTGGCTTGCAA+GGG + chr3_1:76741027-76741046 Msa0376630:CDS 45.0%
!!! TTATTATTTTTGAAAAATTT+AGG + chr3_1:76740332-76740351 Msa0376630:intron 5.0%
!!! TATTATTTTTGAAAAATTTA+GGG + chr3_1:76740333-76740352 Msa0376630:intron 5.0%
!!! TTTTTTAATCTATTTTAATT+TGG + chr3_1:76741500-76741519 Msa0376630:three_prime_UTR 5.0%
!!! TTATTATTTTTGAAAAATTT+AGG + chr3_1:76740332-76740351 Msa0376630:intron 5.0%
!!! TATTATTTTTGAAAAATTTA+GGG + chr3_1:76740333-76740352 Msa0376630:intron 5.0%
!!! TTTTTTAATCTATTTTAATT+TGG + chr3_1:76741500-76741519 Msa0376630:three_prime_UTR 5.0%
AATCAAGAGGGTTCTGCTGG+TGG + chr3_1:76741056-76741075 Msa0376630:CDS 50.0%
! TGGAATGGAATGTTCGGTGG+AGG + chr3_1:76741224-76741243 Msa0376630:CDS 50.0%
! GAATGTTCGGTGGAGGATCA+TGG + chr3_1:76741231-76741250 Msa0376630:CDS 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG + chr3_1:76741388-76741407 Msa0376630:three_prime_UTR 50.0%
AATCAAGAGGGTTCTGCTGG+TGG + chr3_1:76741056-76741075 Msa0376630:CDS 50.0%
! TGGAATGGAATGTTCGGTGG+AGG + chr3_1:76741224-76741243 Msa0376630:CDS 50.0%
! GAATGTTCGGTGGAGGATCA+TGG + chr3_1:76741231-76741250 Msa0376630:CDS 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG + chr3_1:76741388-76741407 Msa0376630:three_prime_UTR 50.0%
CAAGAGGGTTCTGCTGGTGG+TGG + chr3_1:76741059-76741078 Msa0376630:CDS 60.0%
CAAGAGGGTTCTGCTGGTGG+TGG + chr3_1:76741059-76741078 Msa0376630:CDS 60.0%
GGACACAGCTCAGTGGGCAC+AGG + chr3_1:76739915-76739934 Msa0376630:CDS 65.0%
!! GAGGGTTCTGCTGGTGGTGG+TGG + chr3_1:76741062-76741081 Msa0376630:CDS 65.0%
!! GGTTCTGCTGGTGGTGGTGG+TGG + chr3_1:76741065-76741084 Msa0376630:CDS 65.0%
!! TCTGCTGGTGGTGGTGGTGG+TGG + chr3_1:76741068-76741087 Msa0376630:CDS 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG + chr3_1:76741084-76741103 Msa0376630:CDS 65.0%
GGACACAGCTCAGTGGGCAC+AGG + chr3_1:76739915-76739934 Msa0376630:CDS 65.0%
!! GAGGGTTCTGCTGGTGGTGG+TGG + chr3_1:76741062-76741081 Msa0376630:CDS 65.0%
!! GGTTCTGCTGGTGGTGGTGG+TGG + chr3_1:76741065-76741084 Msa0376630:CDS 65.0%
!! TCTGCTGGTGGTGGTGGTGG+TGG + chr3_1:76741068-76741087 Msa0376630:CDS 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG + chr3_1:76741084-76741103 Msa0376630:CDS 65.0%
!! GCTGGTGGTGGTGGTGGTGG+TGG + chr3_1:76741071-76741090 Msa0376630:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr3_1:76741074-76741093 Msa0376630:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr3_1:76741074-76741093 Msa0376630:CDS 70.0%
!! GCTGGTGGTGGTGGTGGTGG+TGG + chr3_1:76741071-76741090 Msa0376630:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr3_1:76741074-76741093 Msa0376630:CDS 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG + chr3_1:76741074-76741093 Msa0376630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76739760 76741566 76739760 ID=Msa0376630;Name=Msa0376630
chr3_1 mRNA 76739760 76741566 76739760 ID=Msa0376630-mRNA-1;Parent=Msa0376630;Name=Msa0376630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=153|1|1|1|1|1|2|310|308
chr3_1 exon 76739760 76739936 76739760 ID=Msa0376630-mRNA-1:exon:18265;Parent=Msa0376630-mRNA-1
chr3_1 exon 76740354 76741566 76740354 ID=Msa0376630-mRNA-1:exon:18266;Parent=Msa0376630-mRNA-1
chr3_1 five_prime_UTR 76739760 76739912 76739760 ID=Msa0376630-mRNA-1:five_prime_utr;Parent=Msa0376630-mRNA-1
chr3_1 CDS 76739913 76739936 76739913 ID=Msa0376630-mRNA-1:cds;Parent=Msa0376630-mRNA-1
chr3_1 CDS 76740354 76741256 76740354 ID=Msa0376630-mRNA-1:cds;Parent=Msa0376630-mRNA-1
chr3_1 three_prime_UTR 76741257 76741566 76741257 ID=Msa0376630-mRNA-1:three_prime_utr;Parent=Msa0376630-mRNA-1
Gene Sequence

>Msa0376630

ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGATTGGTTAAACAAATGGATGGATCAACTTCAAATTCAAAACCAACACCTTCTATGTTAGAGAGAAAAGCAAGGCCACAAAAAGATCAAGCTTTAAACTGTCCAAGGTGCAATTCAACTAACACAAAATTCTGTTACTACAATAACTATAGCCTCTCACAACCAAGGTACTTTTGCAAAACTTGTAGAAGGTATTGGACTGAAGGTGGTTCTTTAAGAAATGTTCCTGTAGGTGGTGGTTCAAGAAAAAACAAAAGATCAACCTCATCATCATCACCTTCAATCTCACAATCACAACCTCCATCATCAATAACAAAAAATATTATCATTAATCCTGATCTTGCTACAGCACAAAATAATTTCCCTCAATCTGCTTCTCAAAACCCTAAGATCCATCAAGGACAAGATCTTAACCTAGCTTATCCACCACAAACAACTGAGGATAATTATAATACCATATCTAAATTCATTGAGCTTCCTTACACAACTGATCAAGACAAAACTACAAGTGCTATGGAGCTTCTGAAAACTGCTTCTTCATCAAGGGGTTTGAATTCTTTTATGCCTATGACTTTGTCTGAGTCTAGTGCAATGTATAATTCAAGTGGTTTTGCTTTGCAAGATTTTAAGCTTGGGGTTAATTTTGGTTTAGAAGGGTTTGAGAATGGTTATGGTGGCTTGCAAGGGATTAATAATCAAGAGGGTTCTGCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCAAGGATGTTGTTTCCTGTTGTAGATGATCATCAGTTGAATAATAAGCAGCAGCAACAAATTCCAAATAGTGGTGAGTTTGAACATCAGCAAAATAGAACTCAAGGTGATTCTACTGGTTATTGGAATGGAATGTTCGGTGGAGGATCATGGTAG

Protein sequence

>Msa0376630

MDTAQWAQGNIGLVKQMDGSTSNSKPTPSMLERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTSSSSPSISQSQPPSSITKNIIINPDLATAQNNFPQSASQNPKIHQGQDLNLAYPPQTTEDNYNTISKFIELPYTTDQDKTTSAMELLKTASSSRGLNSFMPMTLSESSAMYNSSGFALQDFKLGVNFGLEGFENGYGGLQGINNQEGSAGGGGGGGGGARMLFPVVDDHQLNNKQQQQIPNSGEFEHQQNRTQGDSTGYWNGMFGGGSW*