Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028330 | sp|Q8RWR1|JMJ30_ARATH | 31.136 | 273 | 130 | 11 | 27 | 294 | 207 | 426 | 1.34e-21 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028330 | Msa0076180 | 0.844127 | 9.163044e-59 | -8.615850e-47 |
| Msa0028330 | Msa0095850 | 0.827810 | 1.273925e-54 | -8.615850e-47 |
| Msa0028330 | Msa0168580 | 0.802293 | 6.009547e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028330 | MtrunA17_Chr1g0185111 | 94.259 | 540 | 26 | 3 | 1 | 536 | 1 | 539 | 0.0 | 1041 |
| Msa0028330 | MtrunA17_Chr4g0033081 | 39.610 | 154 | 77 | 6 | 139 | 288 | 263 | 404 | 4.66e-22 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028330 | AT5G19840.1 | 53.160 | 538 | 215 | 8 | 7 | 528 | 10 | 526 | 0.0 | 543 |
| Msa0028330 | AT5G19840.2 | 50.093 | 539 | 214 | 9 | 7 | 514 | 10 | 524 | 1.84e-171 | 496 |
| Msa0028330 | AT3G20810.1 | 31.136 | 273 | 130 | 11 | 27 | 294 | 196 | 415 | 1.00e-22 | 101 |
| Msa0028330 | AT3G20810.2 | 31.136 | 273 | 130 | 11 | 27 | 294 | 207 | 426 | 1.36e-22 | 100 |
| Msa0028330 | AT3G20810.3 | 31.496 | 254 | 116 | 11 | 27 | 275 | 196 | 396 | 1.34e-18 | 88.6 |
Find 158 sgRNAs with CRISPR-Local
Find 602 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAGAGCTTTCTCTTTA+TGG | 0.052884 | 1_1:-53129610 | Msa0028330:CDS |
| ATTGGGAGCTTCTTTATTTC+AGG | 0.161998 | 1_1:+53120632 | None:intergenic |
| GGACCAGCAACTGCTAAAAT+TGG | 0.210930 | 1_1:-53124876 | Msa0028330:CDS |
| GTTGAAAGGAATGGATTTAA+AGG | 0.248023 | 1_1:-53124645 | Msa0028330:CDS |
| TTACTTGCTCTTCCATTCTT+AGG | 0.256470 | 1_1:+53124818 | None:intergenic |
| TTTGACATTCCAGAGAATTT+TGG | 0.260261 | 1_1:+53124415 | None:intergenic |
| TATTTCAGGAAAATATTAAA+TGG | 0.260967 | 1_1:+53120646 | None:intergenic |
| TCCAAGGGCAGAAGACTTAA+TGG | 0.263974 | 1_1:-53127502 | Msa0028330:CDS |
| CTAGTTTAGCTAGTTCAAAT+TGG | 0.270035 | 1_1:+53120577 | None:intergenic |
| CTCTACCCAATGCCTATCTA+TGG | 0.271872 | 1_1:-53127761 | Msa0028330:CDS |
| CTAGTTTAGCTAGTTCAAAT+TGG | 0.291464 | 1_1:+53120614 | None:intergenic |
| GCTTCATGAACTCGTGTCTT+TGG | 0.293768 | 1_1:-53124564 | Msa0028330:CDS |
| TTACTATTGCTATTAACTTT+TGG | 0.296412 | 1_1:-53125826 | Msa0028330:CDS |
| AGAGAAAGCTCTCCAAGTTT+TGG | 0.315791 | 1_1:+53129616 | None:intergenic |
| CCGTCTGAATGTCTTCCCTT+AGG | 0.329877 | 1_1:+53128443 | None:intergenic |
| CAACTTCCCAAGAACTTTAG+AGG | 0.336480 | 1_1:-53123632 | Msa0028330:CDS |
| GCAGAAGACTTAATGGAGTT+TGG | 0.345127 | 1_1:-53127495 | Msa0028330:CDS |
| CCTTGGATAAATTGAGTAAT+CGG | 0.353609 | 1_1:+53127518 | None:intergenic |
| CTTGTACATTATTGATTAGT+TGG | 0.356663 | 1_1:-53120524 | Msa0028330:three_prime_UTR |
| TGCGCTAAATAAATTTGTTC+GGG | 0.359336 | 1_1:+53128756 | None:intergenic |
| GTTTGGACAAAAGGTTGTTC+TGG | 0.361014 | 1_1:-53127478 | Msa0028330:CDS |
| ACGAGAGCCTCTAAAGTTCT+TGG | 0.362653 | 1_1:+53123625 | None:intergenic |
| AGTGAACTTTATGAATGAAT+TGG | 0.363017 | 1_1:-53120909 | Msa0028330:three_prime_UTR |
| TTTGATCGTTTGAAGTTTGA+AGG | 0.368858 | 1_1:+53129848 | None:intergenic |
| CTTAATGGAGTTTGGACAAA+AGG | 0.372824 | 1_1:-53127487 | Msa0028330:CDS |
| AAATCAAGGAAAGTAGAAAA+TGG | 0.379020 | 1_1:+53128897 | None:intergenic |
| AACTGTCTTCTATAAATTTG+TGG | 0.379402 | 1_1:-53128276 | Msa0028330:CDS |
| CTGCGCTAAATAAATTTGTT+CGG | 0.380933 | 1_1:+53128755 | None:intergenic |
| TGCATGTACTATCACCAGTT+GGG | 0.384920 | 1_1:-53123600 | Msa0028330:CDS |
| TCCATTAAGTCTTCTGCCCT+TGG | 0.385486 | 1_1:+53127501 | None:intergenic |
| ATATGCATCAATTTATTCTT+CGG | 0.391730 | 1_1:+53120871 | None:intergenic |
| AATGTATTGGACAAATTTGT+GGG | 0.394832 | 1_1:-53120976 | Msa0028330:CDS |
| CGTCTGAATGTCTTCCCTTA+GGG | 0.396196 | 1_1:+53128444 | None:intergenic |
| AACAGTTGTTAGTGTTGTAT+AGG | 0.398057 | 1_1:-53120764 | Msa0028330:three_prime_UTR |
| TCGTAAGGAGAAAGTTCAAT+TGG | 0.399065 | 1_1:-53128470 | Msa0028330:CDS |
| TGGGAAGTTCTTCGTATCTT+CGG | 0.400011 | 1_1:+53129803 | None:intergenic |
| AACTTCAAACGATCAAAGTA+TGG | 0.400916 | 1_1:-53129842 | Msa0028330:exon |
| TATAGACCTTACCATCCTTC+AGG | 0.402206 | 1_1:+53127432 | None:intergenic |
| CGATGGTTTAGATTACTTGC+AGG | 0.403301 | 1_1:-53129576 | Msa0028330:CDS |
| CGATGTATCATGACGATTAA+CGG | 0.407497 | 1_1:+53130021 | None:intergenic |
| AAATGTATTGGACAAATTTG+TGG | 0.410927 | 1_1:-53120977 | Msa0028330:CDS |
| ATCTTCTGTGGTGGAGGCTA+TGG | 0.410951 | 1_1:-53129543 | Msa0028330:CDS |
| AAAGGAGAAAAGACTTAAAG+AGG | 0.411316 | 1_1:-53124627 | Msa0028330:CDS |
| GACCAGCAACTGCTAAAATT+GGG | 0.413196 | 1_1:-53124875 | Msa0028330:CDS |
| TAGTTTAGCTAGTTCAAATT+GGG | 0.416275 | 1_1:+53120615 | None:intergenic |
| AACTCAGCAACAACAACATC+TGG | 0.418124 | 1_1:-53128850 | Msa0028330:CDS |
| CATATAACTTACCTTGTTTG+AGG | 0.419995 | 1_1:+53128182 | None:intergenic |
| TCCGTTTCTTACACAAATCA+AGG | 0.421905 | 1_1:+53128883 | None:intergenic |
| TTCAGTGTATCAAATACATA+GGG | 0.424971 | 1_1:+53120716 | None:intergenic |
| CTTGGATAAATTGAGTAATC+GGG | 0.430456 | 1_1:+53127519 | None:intergenic |
| TAGTTTAGCTAGTTCAAATT+GGG | 0.433414 | 1_1:+53120578 | None:intergenic |
| ATCCAGTTGCCAAAATTCTC+TGG | 0.437695 | 1_1:-53124424 | Msa0028330:CDS |
| AAACCAAAGCATTTCTTCGT+TGG | 0.439277 | 1_1:-53120845 | Msa0028330:three_prime_UTR |
| GTCTTGCATGATGGAACATA+TGG | 0.439711 | 1_1:-53125786 | Msa0028330:CDS |
| TTCTTCGGAGGTACCTTGGT+GGG | 0.440392 | 1_1:+53120886 | None:intergenic |
| TATGCGGTTGCACCAAAACT+TGG | 0.441510 | 1_1:-53129628 | Msa0028330:CDS |
| ATAAATGATTATGATCTCAT+AGG | 0.445329 | 1_1:-53124491 | Msa0028330:CDS |
| GATCCAACGAAGAAATGCTT+TGG | 0.446004 | 1_1:+53120842 | None:intergenic |
| TCAAAATGTCTTTCTTGCTA+TGG | 0.460266 | 1_1:-53124381 | Msa0028330:CDS |
| TACACGGAAATTTGATGAGA+TGG | 0.460378 | 1_1:-53123566 | Msa0028330:CDS |
| CAGTCAGATGTTGAAAGGAA+TGG | 0.465665 | 1_1:-53124654 | Msa0028330:CDS |
| CAAAAGGTTGTTCTGGAGGC+AGG | 0.466338 | 1_1:-53127471 | Msa0028330:CDS |
| AAGGAGAAAAGACTTAAAGA+GGG | 0.467339 | 1_1:-53124626 | Msa0028330:CDS |
| CGAGAGCCTCTAAAGTTCTT+GGG | 0.468427 | 1_1:+53123626 | None:intergenic |
| TCCTTGATTTGTGTAAGAAA+CGG | 0.469402 | 1_1:-53128884 | Msa0028330:CDS |
| CCATTGAGTATACCTGTGAT+TGG | 0.477258 | 1_1:+53127730 | None:intergenic |
| TTCAGGAAAATATTAAATGG+TGG | 0.477903 | 1_1:+53120649 | None:intergenic |
| AGATTTCACAAGAGAGGAGA+AGG | 0.479903 | 1_1:+53129888 | None:intergenic |
| ATTCAGTGTATCAAATACAT+AGG | 0.480443 | 1_1:+53120715 | None:intergenic |
| GTATCAAATACATAGGGGCT+AGG | 0.484996 | 1_1:+53120722 | None:intergenic |
| TCAGGAAAATATTAAATGGT+GGG | 0.485206 | 1_1:+53120650 | None:intergenic |
| GTAAGAACTTCAGCCCCAAC+TGG | 0.503073 | 1_1:+53123586 | None:intergenic |
| GCTTCCCCATAGATAGGCAT+TGG | 0.503987 | 1_1:+53127755 | None:intergenic |
| TGAAGCACCTGGACTGCAGC+AGG | 0.504273 | 1_1:+53124581 | None:intergenic |
| TTTATTCTTCGGAGGTACCT+TGG | 0.505283 | 1_1:+53120882 | None:intergenic |
| CGTAAGGAGAAAGTTCAATT+GGG | 0.506701 | 1_1:-53128469 | Msa0028330:CDS |
| CAACAGTGTTAGCGCCAGCC+AGG | 0.511294 | 1_1:-53124537 | Msa0028330:CDS |
| GCGAACACGCTTCCTAAGAA+TGG | 0.516538 | 1_1:-53124830 | Msa0028330:CDS |
| TTGACAGTGATTGTTGATCC+TGG | 0.517753 | 1_1:+53124519 | None:intergenic |
| CAGTGATTGTTGATCCTGGC+TGG | 0.519786 | 1_1:+53124523 | None:intergenic |
| CAACACAATGTCTTGCATGA+TGG | 0.520074 | 1_1:-53125795 | Msa0028330:CDS |
| GTGATCTTGGAAGTCATCAC+AGG | 0.520874 | 1_1:-53129493 | Msa0028330:CDS |
| CGCAGAATATTGAGACGGTA+TGG | 0.520912 | 1_1:-53125749 | Msa0028330:CDS |
| AATCTAGAATGCTCAAAGCC+AGG | 0.521753 | 1_1:-53120949 | Msa0028330:CDS |
| TTGGAAGCTTCCCCATAGAT+AGG | 0.523469 | 1_1:+53127749 | None:intergenic |
| CGAACAAATTTATTTAGCGC+AGG | 0.525937 | 1_1:-53128754 | Msa0028330:intron |
| GAAGGAGCTATTCACACAAC+AGG | 0.526957 | 1_1:-53123351 | Msa0028330:intron |
| TCATTGTGTTGCTTCGCAAA+CGG | 0.527120 | 1_1:-53128817 | Msa0028330:CDS |
| CTTTCTCTTTATGGAATCCA+CGG | 0.528143 | 1_1:-53129601 | Msa0028330:CDS |
| TCTACCCAATGCCTATCTAT+GGG | 0.528926 | 1_1:-53127760 | Msa0028330:CDS |
| CTGCATGTACTATCACCAGT+TGG | 0.532800 | 1_1:-53123601 | Msa0028330:CDS |
| AAGTTCAATTGGGAACCCTA+AGG | 0.532991 | 1_1:-53128459 | Msa0028330:CDS |
| ATCTAGAATGCTCAAAGCCA+GGG | 0.534129 | 1_1:-53120948 | Msa0028330:CDS |
| AGCAATGAATTCTATTCTGA+AGG | 0.535974 | 1_1:-53123375 | Msa0028330:CDS |
| GCAACTGCTAAAATTGGGGA+TGG | 0.539515 | 1_1:-53124870 | Msa0028330:CDS |
| ATGGGGAAGCTTCCAATCAC+AGG | 0.540697 | 1_1:-53127742 | Msa0028330:intron |
| AATTGCAGTCAGATGTTGAA+AGG | 0.542508 | 1_1:-53124659 | Msa0028330:CDS |
| GCAATGAATTCTATTCTGAA+GGG | 0.548337 | 1_1:-53123374 | Msa0028330:CDS |
| TTAGCATCTCATCTGACCCC+TGG | 0.550595 | 1_1:+53120931 | None:intergenic |
| CCGATTACTCAATTTATCCA+AGG | 0.551976 | 1_1:-53127518 | Msa0028330:CDS |
| AATTTCAGATTTCACAAGAG+AGG | 0.552328 | 1_1:+53129882 | None:intergenic |
| AATCGTCACTATCTACTTGG+TGG | 0.552384 | 1_1:+53125849 | None:intergenic |
| GGTAGGATCTTCTGTGGTGG+AGG | 0.552390 | 1_1:-53129549 | Msa0028330:CDS |
| CTTCCCCATAGATAGGCATT+GGG | 0.552590 | 1_1:+53127756 | None:intergenic |
| TAAAATCGTCACTATCTACT+TGG | 0.557534 | 1_1:+53125846 | None:intergenic |
| CGTAACAGCAGCACCAACAT+TGG | 0.559634 | 1_1:+53129927 | None:intergenic |
| ATTCTTCGGAGGTACCTTGG+TGG | 0.562177 | 1_1:+53120885 | None:intergenic |
| GATGGATGAACTAACTATTG+AGG | 0.566538 | 1_1:-53123548 | Msa0028330:CDS |
| GACTGAGAGTTAATTGTCGT+GGG | 0.567210 | 1_1:-53129993 | Msa0028330:five_prime_UTR |
| TGCATCAATTTATTCTTCGG+AGG | 0.571173 | 1_1:+53120874 | None:intergenic |
| AGTTCAATTGGGAACCCTAA+GGG | 0.576376 | 1_1:-53128458 | Msa0028330:CDS |
| AACTAACTATTGAGGAAGAT+CGG | 0.577756 | 1_1:-53123540 | Msa0028330:intron |
| GTTTAGATTACTTGCAGGCA+CGG | 0.581262 | 1_1:-53129571 | Msa0028330:CDS |
| AGGAAAGTAGAAAATGGTAG+AGG | 0.582577 | 1_1:+53128903 | None:intergenic |
| TATCAAATACATAGGGGCTA+GGG | 0.583187 | 1_1:+53120723 | None:intergenic |
| CATCATGCAAGACATTGTGT+TGG | 0.583461 | 1_1:+53125796 | None:intergenic |
| TTTAGATTACTTGCAGGCAC+GGG | 0.584855 | 1_1:-53129570 | Msa0028330:CDS |
| GATCATGAACAGTAATCGTA+AGG | 0.587526 | 1_1:-53128485 | Msa0028330:CDS |
| TTACGATTACTGTTCATGAT+CGG | 0.587845 | 1_1:+53128487 | None:intergenic |
| TGGACAAAAGGTTGTTCTGG+AGG | 0.593855 | 1_1:-53127475 | Msa0028330:CDS |
| CCAAGATCACCATAAAAGAC+AGG | 0.594951 | 1_1:+53129506 | None:intergenic |
| GACTCGAAGTCGTTAGATGT+GGG | 0.595951 | 1_1:+53129784 | None:intergenic |
| AAACTATGCACAAAAGATTG+TGG | 0.597530 | 1_1:+53128209 | None:intergenic |
| AGACTCGAAGTCGTTAGATG+TGG | 0.598359 | 1_1:+53129783 | None:intergenic |
| CGATTACTCAATTTATCCAA+GGG | 0.598981 | 1_1:-53127517 | Msa0028330:CDS |
| GTACAAGACATAATTATACA+TGG | 0.599435 | 1_1:+53120540 | None:intergenic |
| AGGAGAAAAGACTTAAAGAG+GGG | 0.599672 | 1_1:-53124625 | Msa0028330:CDS |
| GCATGTACTATCACCAGTTG+GGG | 0.599762 | 1_1:-53123599 | Msa0028330:CDS |
| CAGGAAAATATTAAATGGTG+GGG | 0.602135 | 1_1:+53120651 | None:intergenic |
| TAGAGTGAGGGACTAGCAGA+AGG | 0.603258 | 1_1:+53127779 | None:intergenic |
| GAATTCTATTCTGAAGGGGA+AGG | 0.607819 | 1_1:-53123369 | Msa0028330:CDS |
| ATAGTTTCTGGCCTCAAACA+AGG | 0.607916 | 1_1:-53128193 | Msa0028330:intron |
| GATTACTTGCAGGCACGGGT+AGG | 0.611307 | 1_1:-53129566 | Msa0028330:CDS |
| ACCAGCAACTGCTAAAATTG+GGG | 0.620256 | 1_1:-53124874 | Msa0028330:CDS |
| CAACTGCTAAAATTGGGGAT+GGG | 0.621871 | 1_1:-53124869 | Msa0028330:CDS |
| CAATGAATTCTATTCTGAAG+GGG | 0.626132 | 1_1:-53123373 | Msa0028330:CDS |
| TTATGGAATCCACGGAACGA+TGG | 0.627037 | 1_1:-53129593 | Msa0028330:CDS |
| TTGGATAAATTGAGTAATCG+GGG | 0.627533 | 1_1:+53127520 | None:intergenic |
| TGACTGAGAGTTAATTGTCG+TGG | 0.629947 | 1_1:-53129994 | Msa0028330:five_prime_UTR |
| GATAGGCATTGGGTAGAGTG+AGG | 0.631689 | 1_1:+53127766 | None:intergenic |
| ATTTACGCAGAATATTGAGA+CGG | 0.636021 | 1_1:-53125754 | Msa0028330:CDS |
| ATGAATGAATTGGCCCACCA+AGG | 0.636345 | 1_1:-53120899 | Msa0028330:three_prime_UTR |
| TAATCTAAACCATCGTTCCG+TGG | 0.637577 | 1_1:+53129584 | None:intergenic |
| ATAGGCATTGGGTAGAGTGA+GGG | 0.639856 | 1_1:+53127767 | None:intergenic |
| GGCACGGGTAGGATCTTCTG+TGG | 0.658645 | 1_1:-53129555 | Msa0028330:CDS |
| TCAGCAACAACAACATCTGG+AGG | 0.661278 | 1_1:-53128847 | Msa0028330:CDS |
| AGTGAGGGACTAGCAGAAGG+AGG | 0.665357 | 1_1:+53127782 | None:intergenic |
| TTGGGGCTGAAGTTCTTACA+CGG | 0.669048 | 1_1:-53123582 | Msa0028330:CDS |
| CTACCCAATGCCTATCTATG+GGG | 0.674740 | 1_1:-53127759 | Msa0028330:CDS |
| ACGGGTAGGATCTTCTGTGG+TGG | 0.683705 | 1_1:-53129552 | Msa0028330:CDS |
| TCTAGAATGCTCAAAGCCAG+GGG | 0.685468 | 1_1:-53120947 | Msa0028330:CDS |
| TGATCTTGGAAGTCATCACA+GGG | 0.704850 | 1_1:-53129492 | Msa0028330:intron |
| ATGCACAAAAGATTGTGGTG+TGG | 0.710216 | 1_1:+53128214 | None:intergenic |
| TCAGTGTATCAAATACATAG+GGG | 0.710953 | 1_1:+53120717 | None:intergenic |
| CCTAAGGGAAGACATTCAGA+CGG | 0.717846 | 1_1:-53128443 | Msa0028330:intron |
| TTGCAGGAATAGATTCTACG+AGG | 0.728407 | 1_1:-53123429 | Msa0028330:intron |
| TGTATCATGACGATTAACGG+TGG | 0.755390 | 1_1:+53130024 | None:intergenic |
| ACTGAGAGTTAATTGTCGTG+GGG | 0.760854 | 1_1:-53129992 | Msa0028330:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAGTACTAATAT+TGG | + | chr1_1:53121853-53121872 | None:intergenic | 10.0% |
| !! | CATTAAATAAATTAAAACAT+CGG | + | chr1_1:53122498-53122517 | None:intergenic | 10.0% |
| !!! | TATTATTTTTTCATTTGTAT+TGG | - | chr1_1:53124992-53125011 | Msa0028330:intron | 10.0% |
| !!! | TTATGATTTTTTTTTTTAAG+AGG | - | chr1_1:53126238-53126257 | Msa0028330:intron | 10.0% |
| !! | AAATAATCATAATACTTAAA+TGG | + | chr1_1:53127501-53127520 | None:intergenic | 10.0% |
| !!! | ATTTTACATATTAAAAAAGT+TGG | - | chr1_1:53130022-53130041 | Msa0028330:five_prime_UTR | 10.0% |
| !!! | TTTTACATATTAAAAAAGTT+GGG | - | chr1_1:53130023-53130042 | Msa0028330:five_prime_UTR | 10.0% |
| !! | TAGAAATAGATTATACATAA+AGG | + | chr1_1:53121364-53121383 | None:intergenic | 15.0% |
| !! | AAATGAAAAAATAATAGTGT+AGG | + | chr1_1:53124988-53125007 | None:intergenic | 15.0% |
| !! | ATCTATTAAGTTTAGTAAAT+TGG | + | chr1_1:53127677-53127696 | None:intergenic | 15.0% |
| !! | TTATTATTCCAAAAATCTAT+TGG | + | chr1_1:53128621-53128640 | None:intergenic | 15.0% |
| !! | TAATAACATTTAATGTAGAT+AGG | - | chr1_1:53128635-53128654 | Msa0028330:intron | 15.0% |
| !!! | AAATAAAAAAACAGTTTGTT+TGG | + | chr1_1:53129098-53129117 | None:intergenic | 15.0% |
| !! | ATGTTAATTAAACTAATCAA+AGG | - | chr1_1:53129393-53129412 | Msa0028330:intron | 15.0% |
| !! | TATTTCAGGAAAATATTAAA+TGG | + | chr1_1:53129871-53129890 | None:intergenic | 15.0% |
| !!! | TTGATTTTTCTAACCTAAAA+AGG | - | chr1_1:53120860-53120879 | Msa0028330:three_prime_UTR | 20.0% |
| !!! | ACTTATTTGATTTTATCTAG+TGG | + | chr1_1:53121328-53121347 | None:intergenic | 20.0% |
| !! | AATAAGCTAAAATCAACTTA+TGG | - | chr1_1:53121462-53121481 | Msa0028330:intron | 20.0% |
| !! | GTTTAATTAAATGACAGAAA+TGG | + | chr1_1:53122688-53122707 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATAAAATTCTTG+TGG | - | chr1_1:53122950-53122969 | Msa0028330:intron | 20.0% |
| !!! | TTTTGTGTTTAAAATGCAAT+TGG | - | chr1_1:53124517-53124536 | Msa0028330:CDS | 20.0% |
| !!! | TTACTATTGCTATTAACTTT+TGG | - | chr1_1:53124688-53124707 | Msa0028330:intron | 20.0% |
| !!! | TATTTTTTCATTTGTATTGG+TGG | - | chr1_1:53124995-53125014 | Msa0028330:intron | 20.0% |
| !!! | ATTTTTTCATTTGTATTGGT+GGG | - | chr1_1:53124996-53125015 | Msa0028330:intron | 20.0% |
| !!! | CATCTAAAAAATTCTGAAAA+AGG | + | chr1_1:53125131-53125150 | None:intergenic | 20.0% |
| !!! | AAGTTAGTTGTTTTTGTAAT+GGG | - | chr1_1:53125586-53125605 | Msa0028330:intron | 20.0% |
| !! | CAAGTAAGATAATTAGAAAA+TGG | - | chr1_1:53125712-53125731 | Msa0028330:intron | 20.0% |
| !!! | TAGAATTTAGTTTTCTTGTA+AGG | + | chr1_1:53125768-53125787 | None:intergenic | 20.0% |
| !! | ATAAATGATTATGATCTCAT+AGG | - | chr1_1:53126023-53126042 | Msa0028330:intron | 20.0% |
| !! | GTGACATTTGTAAATTATAT+GGG | + | chr1_1:53126175-53126194 | None:intergenic | 20.0% |
| !! | AGTGACATTTGTAAATTATA+TGG | + | chr1_1:53126176-53126195 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCTCATTTTCTC+AGG | - | chr1_1:53126361-53126380 | Msa0028330:intron | 20.0% |
| !! | TAAATCTAAATCCTTCTTAA+TGG | + | chr1_1:53126535-53126554 | None:intergenic | 20.0% |
| !! | AAGAAGGATTTAGATTTAAA+TGG | - | chr1_1:53126537-53126556 | Msa0028330:intron | 20.0% |
| !!! | AAGATAACATCGTATTATTT+TGG | - | chr1_1:53127050-53127069 | Msa0028330:intron | 20.0% |
| !!! | TTTTAACTGTTATCATACAA+TGG | + | chr1_1:53127478-53127497 | None:intergenic | 20.0% |
| !! | TTATTTGAAAAATAGTTCAC+AGG | - | chr1_1:53127515-53127534 | Msa0028330:CDS | 20.0% |
| !! | TTACTAAACTTAATAGATCA+AGG | - | chr1_1:53127679-53127698 | Msa0028330:intron | 20.0% |
| !! | AAAATCCAATTAATTGTGTT+CGG | + | chr1_1:53127771-53127790 | None:intergenic | 20.0% |
| !! | ATAACAAAAATTATCATGGA+AGG | + | chr1_1:53128386-53128405 | None:intergenic | 20.0% |
| !! | TGCTATAACAAAAATTATCA+TGG | + | chr1_1:53128390-53128409 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTTGTTATAGC+AGG | - | chr1_1:53128389-53128408 | Msa0028330:intron | 20.0% |
| !! | TATATAGTTTATACACAAGA+AGG | + | chr1_1:53128512-53128531 | None:intergenic | 20.0% |
| !!! | AAATTACTCCAATAGATTTT+TGG | - | chr1_1:53128610-53128629 | Msa0028330:intron | 20.0% |
| !! | ATAAGCAAAAAAATCTCTAT+TGG | + | chr1_1:53128688-53128707 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCATGACTGTAT+CGG | + | chr1_1:53128775-53128794 | None:intergenic | 20.0% |
| !! | AAAGAACATGAAACATATTA+AGG | + | chr1_1:53128873-53128892 | None:intergenic | 20.0% |
| !! | GCATAAAATAATATTGTACA+TGG | + | chr1_1:53128995-53129014 | None:intergenic | 20.0% |
| !! | ATAAAATGTCATCAATGTTA+AGG | + | chr1_1:53129022-53129041 | None:intergenic | 20.0% |
| !! | TATTAGATGTTAAAAACTTC+AGG | - | chr1_1:53129422-53129441 | Msa0028330:intron | 20.0% |
| !! | ATATGCATCAATTTATTCTT+CGG | + | chr1_1:53129646-53129665 | None:intergenic | 20.0% |
| !! | CGCTTTTCATATAAGTTTTT+CGG | - | chr1_1:53121128-53121147 | Msa0028330:intron | 25.0% |
| ! | AAGTTGTTTATCCAAACAAA+CGG | + | chr1_1:53121155-53121174 | None:intergenic | 25.0% |
| ! | GTAGTTATTGTAAGCTATAT+CGG | - | chr1_1:53121427-53121446 | Msa0028330:intron | 25.0% |
| ! | CTTATTTCAACTTACGAAAA+CGG | + | chr1_1:53121500-53121519 | None:intergenic | 25.0% |
| ! | TGAAATAAGGCAATCAAAAT+TGG | - | chr1_1:53121511-53121530 | Msa0028330:intron | 25.0% |
| ! | TTGGTACTATTTATGTGATA+TGG | - | chr1_1:53121530-53121549 | Msa0028330:intron | 25.0% |
| ! | TGGTACTATTTATGTGATAT+GGG | - | chr1_1:53121531-53121550 | Msa0028330:intron | 25.0% |
| ! | AAATCAAGGAAAGTAGAAAA+TGG | + | chr1_1:53121620-53121639 | None:intergenic | 25.0% |
| !!! | GCACTAAATTGATATTTTGA+CGG | - | chr1_1:53121932-53121951 | Msa0028330:intron | 25.0% |
| !!! | TGTGTTTTGAACTGAATTTT+TGG | - | chr1_1:53121987-53122006 | Msa0028330:intron | 25.0% |
| !!! | ATTTTTGGTGATTGTACTTT+AGG | - | chr1_1:53122002-53122021 | Msa0028330:intron | 25.0% |
| !! | AGTTCTTTTGATCCTAAAAA+TGG | + | chr1_1:53122222-53122241 | None:intergenic | 25.0% |
| ! | AACTGTCTTCTATAAATTTG+TGG | - | chr1_1:53122238-53122257 | Msa0028330:intron | 25.0% |
| !!! | GGAATTTTTAGTACTTGTAT+TGG | - | chr1_1:53122468-53122487 | Msa0028330:intron | 25.0% |
| !! | AATAACATATAGCAGAGTTT+TGG | - | chr1_1:53122538-53122557 | Msa0028330:intron | 25.0% |
| ! | GCAGAATCATAAAAAGAAAA+TGG | + | chr1_1:53122586-53122605 | None:intergenic | 25.0% |
| ! | ACAAAACAACTGCAAAATTT+CGG | + | chr1_1:53122710-53122729 | None:intergenic | 25.0% |
| ! | ACTACATCAATACATATAGA+GGG | + | chr1_1:53122820-53122839 | None:intergenic | 25.0% |
| ! | TACTACATCAATACATATAG+AGG | + | chr1_1:53122821-53122840 | None:intergenic | 25.0% |
| !! | ATGTATTGATGTAGTAAACA+CGG | - | chr1_1:53122825-53122844 | Msa0028330:intron | 25.0% |
| ! | TTGAAAAGAAAGACAAAAGA+AGG | + | chr1_1:53122939-53122958 | None:intergenic | 25.0% |
| !! | GATTATTTCTCTTCCATATT+TGG | - | chr1_1:53123147-53123166 | Msa0028330:intron | 25.0% |
| !! | GATTTTATTACAGTTACAAG+AGG | + | chr1_1:53123463-53123482 | None:intergenic | 25.0% |
| ! | AATATGCATGAATTCTTTCT+CGG | + | chr1_1:53123639-53123658 | None:intergenic | 25.0% |
| ! | AGAATTCATGCATATTTGTT+TGG | - | chr1_1:53123643-53123662 | Msa0028330:intron | 25.0% |
| !!! | TTTTAGAAAATGACTAAAGC+TGG | + | chr1_1:53123773-53123792 | None:intergenic | 25.0% |
| !! | TTATTGGTTGTTGGTTAAAA+TGG | - | chr1_1:53123917-53123936 | Msa0028330:intron | 25.0% |
| !!! | AATGAATTTTAACTGCATCT+AGG | + | chr1_1:53124037-53124056 | None:intergenic | 25.0% |
| ! | CTGAAAATGTGTTTATAAGT+GGG | + | chr1_1:53124198-53124217 | None:intergenic | 25.0% |
| !!! | CTAGAAAAGCATTTATAAGT+GGG | + | chr1_1:53124400-53124419 | None:intergenic | 25.0% |
| !!! | TCTAGAAAAGCATTTATAAG+TGG | + | chr1_1:53124401-53124420 | None:intergenic | 25.0% |
| ! | TTTACATGAATAAACTTCTC+AGG | - | chr1_1:53124585-53124604 | Msa0028330:intron | 25.0% |
| ! | TAATTACTGTTCTATAGTGT+AGG | - | chr1_1:53124640-53124659 | Msa0028330:CDS | 25.0% |
| !!! | TTTTTTCATTTGTATTGGTG+GGG | - | chr1_1:53124997-53125016 | Msa0028330:intron | 25.0% |
| !! | CAGAAAATTTTCTTTGCAAA+TGG | - | chr1_1:53125240-53125259 | Msa0028330:intron | 25.0% |
| ! | GTGTTAGTAAATACATTTGA+AGG | - | chr1_1:53125337-53125356 | Msa0028330:intron | 25.0% |
| ! | TAATAGTCACTAATTCTAAC+AGG | - | chr1_1:53125420-53125439 | Msa0028330:intron | 25.0% |
| !!! | CAAGTTAGTTGTTTTTGTAA+TGG | - | chr1_1:53125585-53125604 | Msa0028330:intron | 25.0% |
| !! | ATATTGAAAAAGCATGTCAT+CGG | + | chr1_1:53125612-53125631 | None:intergenic | 25.0% |
| !!! | ATGACATGCTTTTTCAATAT+AGG | - | chr1_1:53125612-53125631 | Msa0028330:intron | 25.0% |
| ! | ACAAAGTTATTGTTGATACA+AGG | - | chr1_1:53126279-53126298 | Msa0028330:intron | 25.0% |
| ! | AGCAGGAAAGATATTATTAT+TGG | + | chr1_1:53126408-53126427 | None:intergenic | 25.0% |
| ! | TAGGATAGTCTAATTATTAG+AGG | - | chr1_1:53126477-53126496 | Msa0028330:intron | 25.0% |
| ! | TTGTCATTAGACAAGATATA+TGG | - | chr1_1:53126561-53126580 | Msa0028330:intron | 25.0% |
| ! | AAATATCAAAGAAATAGCCA+CGG | + | chr1_1:53126810-53126829 | None:intergenic | 25.0% |
| ! | ATCTATTCCTGCAATTAAAA+AGG | + | chr1_1:53127079-53127098 | None:intergenic | 25.0% |
| ! | TATTAGAAAACTTCTTTCCT+AGG | + | chr1_1:53127438-53127457 | None:intergenic | 25.0% |
| ! | TTTCATCAGAATTTGAAAAC+TGG | + | chr1_1:53127630-53127649 | None:intergenic | 25.0% |
| ! | TGACAATTTGTACTAACAAA+AGG | - | chr1_1:53127650-53127669 | Msa0028330:intron | 25.0% |
| ! | GACAATTTGTACTAACAAAA+GGG | - | chr1_1:53127651-53127670 | Msa0028330:intron | 25.0% |
| !! | AAAGAATGAAGGTATAACAA+CGG | + | chr1_1:53128266-53128285 | None:intergenic | 25.0% |
| ! | TTATCATGGAAGGAAAATAA+GGG | + | chr1_1:53128376-53128395 | None:intergenic | 25.0% |
| ! | ATTATCATGGAAGGAAAATA+AGG | + | chr1_1:53128377-53128396 | None:intergenic | 25.0% |
| ! | TATCAAAAAGACATCACAAA+TGG | + | chr1_1:53128475-53128494 | None:intergenic | 25.0% |
| ! | CTATTAGATTGTTGCAATAA+GGG | - | chr1_1:53128575-53128594 | Msa0028330:intron | 25.0% |
| ! | TATTAGATTGTTGCAATAAG+GGG | - | chr1_1:53128576-53128595 | Msa0028330:intron | 25.0% |
| !! | TTTTGCTTATAATTGTGAAC+CGG | - | chr1_1:53128698-53128717 | Msa0028330:intron | 25.0% |
| !!! | TTATTTTTCATGACTGTATC+GGG | + | chr1_1:53128774-53128793 | None:intergenic | 25.0% |
| ! | AATAAATGTTCATCAGAAAG+AGG | - | chr1_1:53128789-53128808 | Msa0028330:CDS | 25.0% |
| !!! | ACTTTAACTTTTCTAGCATT+TGG | - | chr1_1:53128956-53128975 | Msa0028330:intron | 25.0% |
| ! | TCCTAAATATACTTTGATGA+TGG | - | chr1_1:53129190-53129209 | Msa0028330:intron | 25.0% |
| ! | TATTAAAGAGAATAAGCAGT+TGG | - | chr1_1:53129318-53129337 | Msa0028330:intron | 25.0% |
| ! | ATTAAAGAGAATAAGCAGTT+GGG | - | chr1_1:53129319-53129338 | Msa0028330:intron | 25.0% |
| !! | TTACGTTTTCTTTTCATGTA+TGG | - | chr1_1:53129501-53129520 | Msa0028330:CDS | 25.0% |
| ! | TCAGGCATTTAAAAATGTAT+TGG | - | chr1_1:53129525-53129544 | Msa0028330:CDS | 25.0% |
| ! | AAATGTATTGGACAAATTTG+TGG | - | chr1_1:53129537-53129556 | Msa0028330:CDS | 25.0% |
| ! | AATGTATTGGACAAATTTGT+GGG | - | chr1_1:53129538-53129557 | Msa0028330:CDS | 25.0% |
| ! | AGTGAACTTTATGAATGAAT+TGG | - | chr1_1:53129605-53129624 | Msa0028330:CDS | 25.0% |
| ! | TTCAGTGTATCAAATACATA+GGG | + | chr1_1:53129801-53129820 | None:intergenic | 25.0% |
| ! | ATTCAGTGTATCAAATACAT+AGG | + | chr1_1:53129802-53129821 | None:intergenic | 25.0% |
| ! | TCAGGAAAATATTAAATGGT+GGG | + | chr1_1:53129867-53129886 | None:intergenic | 25.0% |
| ! | TTCAGGAAAATATTAAATGG+TGG | + | chr1_1:53129868-53129887 | None:intergenic | 25.0% |
| ! | TAGTTTAGCTAGTTCAAATT+GGG | + | chr1_1:53129902-53129921 | None:intergenic | 25.0% |
| ! | TAGTTTAGCTAGTTCAAATT+GGG | + | chr1_1:53129902-53129921 | None:intergenic | 25.0% |
| ! | GTACAAGACATAATTATACA+TGG | + | chr1_1:53129977-53129996 | None:intergenic | 25.0% |
| !! | CTTGTACATTATTGATTAGT+TGG | - | chr1_1:53129990-53130009 | Msa0028330:five_prime_UTR | 25.0% |
| ! | GAAGAACAATTTTCCAATGT+TGG | - | chr1_1:53120574-53120593 | Msa0028330:three_prime_UTR | 30.0% |
| AATTTCAGATTTCACAAGAG+AGG | + | chr1_1:53120635-53120654 | None:intergenic | 30.0% | |
| ! | TTTGATCGTTTGAAGTTTGA+AGG | + | chr1_1:53120669-53120688 | None:intergenic | 30.0% |
| AACTTCAAACGATCAAAGTA+TGG | - | chr1_1:53120672-53120691 | Msa0028330:three_prime_UTR | 30.0% | |
| ! | TGTTGTTTGATTGATTACAG+CGG | + | chr1_1:53120779-53120798 | None:intergenic | 30.0% |
| TAACCTAAAAAGGTTCTATG+CGG | - | chr1_1:53120870-53120889 | Msa0028330:three_prime_UTR | 30.0% | |
| AGTTGTTTATCCAAACAAAC+GGG | + | chr1_1:53121154-53121173 | None:intergenic | 30.0% | |
| AAGCATGTTTGACAATGTTT+GGG | + | chr1_1:53121302-53121321 | None:intergenic | 30.0% | |
| TAAGCATGTTTGACAATGTT+TGG | + | chr1_1:53121303-53121322 | None:intergenic | 30.0% | |
| TTATTGTAAGCTATATCGGA+GGG | - | chr1_1:53121431-53121450 | Msa0028330:intron | 30.0% | |
| !! | CGTTTTCGTAAGTTGAAATA+AGG | - | chr1_1:53121498-53121517 | Msa0028330:intron | 30.0% |
| TTATGTGATATGGGATTATG+TGG | - | chr1_1:53121540-53121559 | Msa0028330:intron | 30.0% | |
| !! | TCCTTGATTTGTGTAAGAAA+CGG | - | chr1_1:53121630-53121649 | Msa0028330:intron | 30.0% |
| ! | TGCGCTAAATAAATTTGTTC+GGG | + | chr1_1:53121761-53121780 | None:intergenic | 30.0% |
| ! | CTGCGCTAAATAAATTTGTT+CGG | + | chr1_1:53121762-53121781 | None:intergenic | 30.0% |
| ! | TGAGATAGGTTATTTCACAT+TGG | + | chr1_1:53121796-53121815 | None:intergenic | 30.0% |
| GTGAAATAACCTATCTCAAT+TGG | - | chr1_1:53121798-53121817 | Msa0028330:intron | 30.0% | |
| TTTGATGAACCAATTGAGAT+AGG | + | chr1_1:53121810-53121829 | None:intergenic | 30.0% | |
| CAAAATATCAATTTAGTGCG+TGG | + | chr1_1:53121931-53121950 | None:intergenic | 30.0% | |
| TTACGATTACTGTTCATGAT+CGG | + | chr1_1:53122030-53122049 | None:intergenic | 30.0% | |
| !!! | CTACTTTGTTTTGTAGTCTA+TGG | - | chr1_1:53122112-53122131 | Msa0028330:intron | 30.0% |
| ! | TCTTTTGATCCTAAAAATGG+AGG | + | chr1_1:53122219-53122238 | None:intergenic | 30.0% |
| AAACTATGCACAAAAGATTG+TGG | + | chr1_1:53122308-53122327 | None:intergenic | 30.0% | |
| ! | AATCTTTTGTGCATAGTTTC+TGG | - | chr1_1:53122309-53122328 | Msa0028330:intron | 30.0% |
| ! | CATATAACTTACCTTGTTTG+AGG | + | chr1_1:53122335-53122354 | None:intergenic | 30.0% |
| TAATAGGTCATAACAAGAAG+AGG | + | chr1_1:53122362-53122381 | None:intergenic | 30.0% | |
| TAATATGCTATCAACTGTGT+AGG | - | chr1_1:53122447-53122466 | Msa0028330:intron | 30.0% | |
| !! | TAAATGACAGAAATGGATTG+AGG | + | chr1_1:53122681-53122700 | None:intergenic | 30.0% |
| !! | GAAATTTTGCAGTTGTTTTG+TGG | - | chr1_1:53122709-53122728 | Msa0028330:intron | 30.0% |
| TTGGATAAATTGAGTAATCG+GGG | + | chr1_1:53122997-53123016 | None:intergenic | 30.0% | |
| CTTGGATAAATTGAGTAATC+GGG | + | chr1_1:53122998-53123017 | None:intergenic | 30.0% | |
| CCTTGGATAAATTGAGTAAT+CGG | + | chr1_1:53122999-53123018 | None:intergenic | 30.0% | |
| CGATTACTCAATTTATCCAA+GGG | - | chr1_1:53122997-53123016 | Msa0028330:intron | 30.0% | |
| ! | TAACTTCTCTGATTGTTTTC+TGG | - | chr1_1:53123212-53123231 | Msa0028330:intron | 30.0% |
| ! | AACTTCTCTGATTGTTTTCT+GGG | - | chr1_1:53123213-53123232 | Msa0028330:intron | 30.0% |
| !! | TTCTGTACTGGTTAAATATC+TGG | - | chr1_1:53123238-53123257 | Msa0028330:intron | 30.0% |
| TCAATGTTCACACTTATTGA+AGG | - | chr1_1:53123266-53123285 | Msa0028330:intron | 30.0% | |
| ACAGCTCATAATTAGATAAC+TGG | - | chr1_1:53123290-53123309 | Msa0028330:intron | 30.0% | |
| CAAGAATTGTTAGCAATTGT+AGG | + | chr1_1:53123828-53123847 | None:intergenic | 30.0% | |
| ATGACATAATGCGAAGATAT+AGG | + | chr1_1:53123862-53123881 | None:intergenic | 30.0% | |
| ! | TCATGGTCCTTTTCATTTAT+TGG | - | chr1_1:53123901-53123920 | Msa0028330:intron | 30.0% |
| CCAACAACCAATAAATGAAA+AGG | + | chr1_1:53123911-53123930 | None:intergenic | 30.0% | |
| !! | CCTTTTCATTTATTGGTTGT+TGG | - | chr1_1:53123908-53123927 | Msa0028330:intron | 30.0% |
| AAGAAAGATCTATACTCTCA+TGG | + | chr1_1:53123990-53124009 | None:intergenic | 30.0% | |
| AGAGTATAGATCTTTCTTGA+AGG | - | chr1_1:53123992-53124011 | Msa0028330:intron | 30.0% | |
| AAATGTATATGCTCAAGCAA+CGG | + | chr1_1:53124096-53124115 | None:intergenic | 30.0% | |
| TCTTCTCTTTGAATTTGAGT+TGG | - | chr1_1:53124126-53124145 | Msa0028330:intron | 30.0% | |
| ! | CTTCTCTTTGAATTTGAGTT+GGG | - | chr1_1:53124127-53124146 | Msa0028330:intron | 30.0% |
| AAAATGTGTTTATAAGTGGG+AGG | + | chr1_1:53124195-53124214 | None:intergenic | 30.0% | |
| CCTGAAAATGTGTTTATAAG+TGG | + | chr1_1:53124199-53124218 | None:intergenic | 30.0% | |
| ! | CCACTTATAAACACATTTTC+AGG | - | chr1_1:53124196-53124215 | Msa0028330:intron | 30.0% |
| GAGTTTATCCAAGATTCATT+GGG | + | chr1_1:53124313-53124332 | None:intergenic | 30.0% | |
| TCCTATACCATCTTAGAATT+TGG | - | chr1_1:53124331-53124350 | Msa0028330:intron | 30.0% | |
| CCTATACCATCTTAGAATTT+GGG | - | chr1_1:53124332-53124351 | Msa0028330:intron | 30.0% | |
| TAACTCAACCCTACAAAATA+GGG | - | chr1_1:53124362-53124381 | Msa0028330:intron | 30.0% | |
| ! | ATCTTTCACCCTATTTTGTA+GGG | + | chr1_1:53124373-53124392 | None:intergenic | 30.0% |
| ATAGATCCTACTGCAAAATA+CGG | + | chr1_1:53124496-53124515 | None:intergenic | 30.0% | |
| TGTAATGAATATGCGAACTA+GGG | + | chr1_1:53124550-53124569 | None:intergenic | 30.0% | |
| TTGTAATGAATATGCGAACT+AGG | + | chr1_1:53124551-53124570 | None:intergenic | 30.0% | |
| TAAAATCGTCACTATCTACT+TGG | + | chr1_1:53124671-53124690 | None:intergenic | 30.0% | |
| !! | CTATTGCTATTAACTTTTGG+TGG | - | chr1_1:53124691-53124710 | Msa0028330:intron | 30.0% |
| ATTTACGCAGAATATTGAGA+CGG | - | chr1_1:53124760-53124779 | Msa0028330:intron | 30.0% | |
| CTAACACCATTACAAATACA+AGG | + | chr1_1:53125324-53125343 | None:intergenic | 30.0% | |
| TTTAAGAATCCGTACAATCA+AGG | - | chr1_1:53125379-53125398 | Msa0028330:intron | 30.0% | |
| GTTAGTATTCCTTGATTGTA+CGG | + | chr1_1:53125391-53125410 | None:intergenic | 30.0% | |
| TTAACTCGATGAACTTTGAT+AGG | + | chr1_1:53125539-53125558 | None:intergenic | 30.0% | |
| !!! | ATGCTTTTTCAATATAGGAC+AGG | - | chr1_1:53125617-53125636 | Msa0028330:intron | 30.0% |
| AAAATTGATTAGACCGTCAA+TGG | + | chr1_1:53125804-53125823 | None:intergenic | 30.0% | |
| ! | GTTGAAAGGAATGGATTTAA+AGG | - | chr1_1:53125869-53125888 | Msa0028330:intron | 30.0% |
| AAAGGAGAAAAGACTTAAAG+AGG | - | chr1_1:53125887-53125906 | Msa0028330:intron | 30.0% | |
| AAGGAGAAAAGACTTAAAGA+GGG | - | chr1_1:53125888-53125907 | Msa0028330:intron | 30.0% | |
| ! | TTTGACATTCCAGAGAATTT+TGG | + | chr1_1:53126102-53126121 | None:intergenic | 30.0% |
| !! | AAGACATTTTGAAGAGTTTG+TGG | + | chr1_1:53126125-53126144 | None:intergenic | 30.0% |
| TCAAAATGTCTTTCTTGCTA+TGG | - | chr1_1:53126133-53126152 | Msa0028330:intron | 30.0% | |
| TTTGTACTTGATCATATCGA+TGG | - | chr1_1:53126304-53126323 | Msa0028330:intron | 30.0% | |
| AATGTATTTGTCAACTTGCA+AGG | + | chr1_1:53126337-53126356 | None:intergenic | 30.0% | |
| TAATATCTTTCCTGCTTGAA+AGG | - | chr1_1:53126412-53126431 | Msa0028330:intron | 30.0% | |
| AATATCTTTCCTGCTTGAAA+GGG | - | chr1_1:53126413-53126432 | Msa0028330:intron | 30.0% | |
| AAAGTGAGTAGATCATATGT+AGG | - | chr1_1:53126458-53126477 | Msa0028330:intron | 30.0% | |
| AGTCTAATTATTAGAGGTAG+AGG | - | chr1_1:53126483-53126502 | Msa0028330:intron | 30.0% | |
| GTCTAATTATTAGAGGTAGA+GGG | - | chr1_1:53126484-53126503 | Msa0028330:intron | 30.0% | |
| CATTAGACAAGATATATGGT+AGG | - | chr1_1:53126565-53126584 | Msa0028330:intron | 30.0% | |
| !! | AAGGTGTTATTGTCGTTAAA+AGG | - | chr1_1:53126642-53126661 | Msa0028330:intron | 30.0% |
| !! | AGGTGTTATTGTCGTTAAAA+GGG | - | chr1_1:53126643-53126662 | Msa0028330:intron | 30.0% |
| ! | TCACTTCTAAAGAATAAAGG+AGG | + | chr1_1:53126687-53126706 | None:intergenic | 30.0% |
| ! | GCATCACTTCTAAAGAATAA+AGG | + | chr1_1:53126690-53126709 | None:intergenic | 30.0% |
| ! | TATTCTTTAGAAGTGATGCT+TGG | - | chr1_1:53126691-53126710 | Msa0028330:intron | 30.0% |
| ! | ATTCTTTAGAAGTGATGCTT+GGG | - | chr1_1:53126692-53126711 | Msa0028330:intron | 30.0% |
| AACTAACTATTGAGGAAGAT+CGG | - | chr1_1:53126974-53126993 | Msa0028330:intron | 30.0% | |
| TCATAAGTGTTTCATGTGAT+TGG | - | chr1_1:53127019-53127038 | Msa0028330:intron | 30.0% | |
| AGCAATGAATTCTATTCTGA+AGG | - | chr1_1:53127139-53127158 | Msa0028330:intron | 30.0% | |
| GCAATGAATTCTATTCTGAA+GGG | - | chr1_1:53127140-53127159 | Msa0028330:intron | 30.0% | |
| ! | CAATGAATTCTATTCTGAAG+GGG | - | chr1_1:53127141-53127160 | Msa0028330:intron | 30.0% |
| ! | TTAATAGGTTGGAGATTCAA+GGG | + | chr1_1:53127296-53127315 | None:intergenic | 30.0% |
| !!! | AAAGTTTTGGGTTAATAGGT+TGG | + | chr1_1:53127307-53127326 | None:intergenic | 30.0% |
| !!! | CAGAAAAGTTTTGGGTTAAT+AGG | + | chr1_1:53127311-53127330 | None:intergenic | 30.0% |
| !! | TCTGCATAAGTTCTAAAACA+AGG | - | chr1_1:53127561-53127580 | Msa0028330:intron | 30.0% |
| AATGCACACGGAATTTATAT+CGG | - | chr1_1:53127710-53127729 | Msa0028330:intron | 30.0% | |
| AAACTCCGAACACAATTAAT+TGG | - | chr1_1:53127763-53127782 | Msa0028330:CDS | 30.0% | |
| AAGCTGAATCAATGTTGAAA+TGG | - | chr1_1:53127970-53127989 | Msa0028330:intron | 30.0% | |
| !! | TGTCTTGAATTTGCTATCAA+TGG | - | chr1_1:53128004-53128023 | Msa0028330:intron | 30.0% |
| ACTAGAAAATAGAGTGACTA+TGG | - | chr1_1:53128040-53128059 | Msa0028330:intron | 30.0% | |
| GGAAAAGAATTGGATAGTAA+CGG | + | chr1_1:53128134-53128153 | None:intergenic | 30.0% | |
| TATCATGGAAGGAAAATAAG+GGG | + | chr1_1:53128375-53128394 | None:intergenic | 30.0% | |
| AAAAGACATCACAAATGGTA+TGG | + | chr1_1:53128470-53128489 | None:intergenic | 30.0% | |
| GCTATTAGATTGTTGCAATA+AGG | - | chr1_1:53128574-53128593 | Msa0028330:intron | 30.0% | |
| ATTAGATTGTTGCAATAAGG+GGG | - | chr1_1:53128577-53128596 | Msa0028330:intron | 30.0% | |
| ! | TATTTTTCATGACTGTATCG+GGG | + | chr1_1:53128773-53128792 | None:intergenic | 30.0% |
| CCAAATAGTTATAGCATAGA+TGG | + | chr1_1:53128830-53128849 | None:intergenic | 30.0% | |
| CCATCTATGCTATAACTATT+TGG | - | chr1_1:53128827-53128846 | Msa0028330:CDS | 30.0% | |
| GGAACATGAAACACATATTA+AGG | + | chr1_1:53128913-53128932 | None:intergenic | 30.0% | |
| GCCATCATCAAAGTATATTT+AGG | + | chr1_1:53129194-53129213 | None:intergenic | 30.0% | |
| ! | GTTCACACTTTAGAAGTATA+TGG | - | chr1_1:53129449-53129468 | Msa0028330:intron | 30.0% |
| ! | TTTCTTTTCATGTATGGTTC+AGG | - | chr1_1:53129507-53129526 | Msa0028330:CDS | 30.0% |
| AACAGTTGTTAGTGTTGTAT+AGG | - | chr1_1:53129750-53129769 | Msa0028330:intron | 30.0% | |
| TCAGTGTATCAAATACATAG+GGG | + | chr1_1:53129800-53129819 | None:intergenic | 30.0% | |
| CAGGAAAATATTAAATGGTG+GGG | + | chr1_1:53129866-53129885 | None:intergenic | 30.0% | |
| CTAGTTTAGCTAGTTCAAAT+TGG | + | chr1_1:53129903-53129922 | None:intergenic | 30.0% | |
| CTAGTTTAGCTAGTTCAAAT+TGG | + | chr1_1:53129903-53129922 | None:intergenic | 30.0% | |
| CGATGTATCATGACGATTAA+CGG | + | chr1_1:53120496-53120515 | None:intergenic | 35.0% | |
| GTTGTTTGATTGATTACAGC+GGG | + | chr1_1:53120778-53120797 | None:intergenic | 35.0% | |
| CTTTCTCTTTATGGAATCCA+CGG | - | chr1_1:53120913-53120932 | Msa0028330:three_prime_UTR | 35.0% | |
| GTTATTGTAAGCTATATCGG+AGG | - | chr1_1:53121430-53121449 | Msa0028330:intron | 35.0% | |
| AGGAAAGTAGAAAATGGTAG+AGG | + | chr1_1:53121614-53121633 | None:intergenic | 35.0% | |
| TCCGTTTCTTACACAAATCA+AGG | + | chr1_1:53121634-53121653 | None:intergenic | 35.0% | |
| CGAACAAATTTATTTAGCGC+AGG | - | chr1_1:53121760-53121779 | Msa0028330:intron | 35.0% | |
| ATATCAATTTAGTGCGTGGA+TGG | + | chr1_1:53121927-53121946 | None:intergenic | 35.0% | |
| GATCATGAACAGTAATCGTA+AGG | - | chr1_1:53122029-53122048 | Msa0028330:intron | 35.0% | |
| TCGTAAGGAGAAAGTTCAAT+TGG | - | chr1_1:53122044-53122063 | Msa0028330:intron | 35.0% | |
| CGTAAGGAGAAAGTTCAATT+GGG | - | chr1_1:53122045-53122064 | Msa0028330:intron | 35.0% | |
| TTCTGCAAAAAATCCTTTCC+AGG | - | chr1_1:53122600-53122619 | Msa0028330:intron | 35.0% | |
| TCTGCAAAAAATCCTTTCCA+GGG | - | chr1_1:53122601-53122620 | Msa0028330:intron | 35.0% | |
| GAATAAGTAACTGAAAACCC+TGG | + | chr1_1:53122621-53122640 | None:intergenic | 35.0% | |
| CCGATTACTCAATTTATCCA+AGG | - | chr1_1:53122996-53123015 | Msa0028330:intron | 35.0% | |
| CTTAATGGAGTTTGGACAAA+AGG | - | chr1_1:53123027-53123046 | Msa0028330:intron | 35.0% | |
| ! | TGATAAGCCTTTCTGTTTCT+GGG | - | chr1_1:53123122-53123141 | Msa0028330:intron | 35.0% |
| TAATCTACCCAGAAACAGAA+AGG | + | chr1_1:53123132-53123151 | None:intergenic | 35.0% | |
| !!! | TTGTTTGGTGCTTTTGATGA+AGG | - | chr1_1:53123658-53123677 | Msa0028330:intron | 35.0% |
| AAGGTGATTGATATGTGCAT+TGG | - | chr1_1:53123677-53123696 | Msa0028330:intron | 35.0% | |
| AATAAATGCTTACAAGCCTG+AGG | - | chr1_1:53123793-53123812 | Msa0028330:intron | 35.0% | |
| ATAAATGCTTACAAGCCTGA+GGG | - | chr1_1:53123794-53123813 | Msa0028330:intron | 35.0% | |
| TCTAACTCAACCTTACGAAA+CGG | - | chr1_1:53124150-53124169 | Msa0028330:intron | 35.0% | |
| GGAGTTTATCCAAGATTCAT+TGG | + | chr1_1:53124314-53124333 | None:intergenic | 35.0% | |
| !! | CCCAAATTCTAAGATGGTAT+AGG | + | chr1_1:53124335-53124354 | None:intergenic | 35.0% |
| ! | GTTCAACCCAAATTCTAAGA+TGG | + | chr1_1:53124341-53124360 | None:intergenic | 35.0% |
| ! | CTATTTTGTAGGGTTGAGTT+AGG | + | chr1_1:53124363-53124382 | None:intergenic | 35.0% |
| CTAACTCAACCCTACAAAAT+AGG | - | chr1_1:53124361-53124380 | Msa0028330:intron | 35.0% | |
| ! | CATCTTTCACCCTATTTTGT+AGG | + | chr1_1:53124374-53124393 | None:intergenic | 35.0% |
| ! | AAGGTTGATTGACAAAGAGA+TGG | - | chr1_1:53124913-53124932 | Msa0028330:intron | 35.0% |
| ATTACAAATACAAGGTGGTG+TGG | + | chr1_1:53125316-53125335 | None:intergenic | 35.0% | |
| ACACCACCTTGTATTTGTAA+TGG | - | chr1_1:53125315-53125334 | Msa0028330:intron | 35.0% | |
| ACACCATTACAAATACAAGG+TGG | + | chr1_1:53125321-53125340 | None:intergenic | 35.0% | |
| !! | TTGTTTCTGAGTGTGAAGAA+TGG | - | chr1_1:53125486-53125505 | Msa0028330:intron | 35.0% |
| ! | ACAACTAACTTGTGAGCATA+AGG | + | chr1_1:53125577-53125596 | None:intergenic | 35.0% |
| TTACTTGCTCTTCCATTCTT+AGG | + | chr1_1:53125699-53125718 | None:intergenic | 35.0% | |
| GCTTATCATTTCTCCATTGA+CGG | - | chr1_1:53125788-53125807 | Msa0028330:CDS | 35.0% | |
| AATTGCAGTCAGATGTTGAA+AGG | - | chr1_1:53125855-53125874 | Msa0028330:CDS | 35.0% | |
| AGGAGAAAAGACTTAAAGAG+GGG | - | chr1_1:53125889-53125908 | Msa0028330:intron | 35.0% | |
| ATGATCTACTCACTTTACGT+AGG | + | chr1_1:53126454-53126473 | None:intergenic | 35.0% | |
| ! | GTTGAGCCAACAATTTTCAT+TGG | + | chr1_1:53126513-53126532 | None:intergenic | 35.0% |
| AGATATATGGTAGGACATTG+TGG | - | chr1_1:53126574-53126593 | Msa0028330:intron | 35.0% | |
| ! | TATGACTGATTCCAACTAGT+GGG | - | chr1_1:53126617-53126636 | Msa0028330:intron | 35.0% |
| TACACGGAAATTTGATGAGA+TGG | - | chr1_1:53126948-53126967 | Msa0028330:intron | 35.0% | |
| GATGGATGAACTAACTATTG+AGG | - | chr1_1:53126966-53126985 | Msa0028330:intron | 35.0% | |
| ATTCACACAACAGGTAATTG+AGG | - | chr1_1:53127172-53127191 | Msa0028330:intron | 35.0% | |
| !!! | TGTGCTCTAGCTTTATCTTT+TGG | - | chr1_1:53127198-53127217 | Msa0028330:intron | 35.0% |
| TGTACTTAGAGTCACATGAA+GGG | - | chr1_1:53127257-53127276 | Msa0028330:intron | 35.0% | |
| ! | GTTAATAGGTTGGAGATTCA+AGG | + | chr1_1:53127297-53127316 | None:intergenic | 35.0% |
| ! | GTGAGAGTCAGAAAAGTTTT+GGG | + | chr1_1:53127319-53127338 | None:intergenic | 35.0% |
| ! | AGTGAGAGTCAGAAAAGTTT+TGG | + | chr1_1:53127320-53127339 | None:intergenic | 35.0% |
| !! | AAGCAACATGAATTTGCTGA+TGG | - | chr1_1:53127402-53127421 | Msa0028330:intron | 35.0% |
| TACAATGGAAAACAGTTCGA+GGG | + | chr1_1:53127463-53127482 | None:intergenic | 35.0% | |
| ATACAATGGAAAACAGTTCG+AGG | + | chr1_1:53127464-53127483 | None:intergenic | 35.0% | |
| ATGCACACGGAATTTATATC+GGG | - | chr1_1:53127711-53127730 | Msa0028330:intron | 35.0% | |
| CCAATACAAAGAATGCTTCA+GGG | + | chr1_1:53127835-53127854 | None:intergenic | 35.0% | |
| TCCAATACAAAGAATGCTTC+AGG | + | chr1_1:53127836-53127855 | None:intergenic | 35.0% | |
| ! | GAAGCATTCTTTGTATTGGA+CGG | - | chr1_1:53127836-53127855 | Msa0028330:intron | 35.0% |
| !! | GAACATTGTAAGGTATTGCA+CGG | + | chr1_1:53127867-53127886 | None:intergenic | 35.0% |
| CAATGTTGAAATGGAGATGA+TGG | - | chr1_1:53127979-53127998 | Msa0028330:intron | 35.0% | |
| !! | AGTCACTCTATTTTCTAGTG+AGG | + | chr1_1:53128039-53128058 | None:intergenic | 35.0% |
| !! | TGAAGGTTGTTTTCTCCATA+GGG | + | chr1_1:53128095-53128114 | None:intergenic | 35.0% |
| CAAGGATATGCAAAGAATGA+AGG | + | chr1_1:53128277-53128296 | None:intergenic | 35.0% | |
| CATTCTTTGCATATCCTTGT+AGG | - | chr1_1:53128278-53128297 | Msa0028330:CDS | 35.0% | |
| ATCATGGAAGGAAAATAAGG+GGG | + | chr1_1:53128374-53128393 | None:intergenic | 35.0% | |
| ATCAAAATTTCCACTTGCCT+TGG | - | chr1_1:53128435-53128454 | Msa0028330:intron | 35.0% | |
| AGAATAAGCAGTTGGGTTAT+TGG | - | chr1_1:53129326-53129345 | Msa0028330:intron | 35.0% | |
| GAATAAGCAGTTGGGTTATT+GGG | - | chr1_1:53129327-53129346 | Msa0028330:intron | 35.0% | |
| TGCATCAATTTATTCTTCGG+AGG | + | chr1_1:53129643-53129662 | None:intergenic | 35.0% | |
| ! | AAACCAAAGCATTTCTTCGT+TGG | - | chr1_1:53129669-53129688 | Msa0028330:intron | 35.0% |
| TATCAAATACATAGGGGCTA+GGG | + | chr1_1:53129794-53129813 | None:intergenic | 35.0% | |
| ! | ATTGGGAGCTTCTTTATTTC+AGG | + | chr1_1:53129885-53129904 | None:intergenic | 35.0% |
| TGTATCATGACGATTAACGG+TGG | + | chr1_1:53120493-53120512 | None:intergenic | 40.0% | |
| TGACTGAGAGTTAATTGTCG+TGG | - | chr1_1:53120520-53120539 | Msa0028330:three_prime_UTR | 40.0% | |
| GACTGAGAGTTAATTGTCGT+GGG | - | chr1_1:53120521-53120540 | Msa0028330:three_prime_UTR | 40.0% | |
| ACTGAGAGTTAATTGTCGTG+GGG | - | chr1_1:53120522-53120541 | Msa0028330:three_prime_UTR | 40.0% | |
| AGATTTCACAAGAGAGGAGA+AGG | + | chr1_1:53120629-53120648 | None:intergenic | 40.0% | |
| TGGGAAGTTCTTCGTATCTT+CGG | + | chr1_1:53120714-53120733 | None:intergenic | 40.0% | |
| ! | CAACCGCATAGAACCTTTTT+AGG | + | chr1_1:53120876-53120895 | None:intergenic | 40.0% |
| ! | AGAGAAAGCTCTCCAAGTTT+TGG | + | chr1_1:53120901-53120920 | None:intergenic | 40.0% |
| CTTGGAGAGCTTTCTCTTTA+TGG | - | chr1_1:53120904-53120923 | Msa0028330:three_prime_UTR | 40.0% | |
| TAATCTAAACCATCGTTCCG+TGG | + | chr1_1:53120933-53120952 | None:intergenic | 40.0% | |
| CGATGGTTTAGATTACTTGC+AGG | - | chr1_1:53120938-53120957 | Msa0028330:exon | 40.0% | |
| GTTTAGATTACTTGCAGGCA+CGG | - | chr1_1:53120943-53120962 | Msa0028330:CDS | 40.0% | |
| TTTAGATTACTTGCAGGCAC+GGG | - | chr1_1:53120944-53120963 | Msa0028330:CDS | 40.0% | |
| CCAAGATCACCATAAAAGAC+AGG | + | chr1_1:53121011-53121030 | None:intergenic | 40.0% | |
| ! | CCTGTCTTTTATGGTGATCT+TGG | - | chr1_1:53121008-53121027 | Msa0028330:intron | 40.0% |
| TGATCTTGGAAGTCATCACA+GGG | - | chr1_1:53121022-53121041 | Msa0028330:intron | 40.0% | |
| AAGCTATATCGGAGGGTTTA+TGG | - | chr1_1:53121438-53121457 | Msa0028330:intron | 40.0% | |
| TGTTCATTTCCTTGCATTGC+AGG | - | chr1_1:53121586-53121605 | Msa0028330:intron | 40.0% | |
| AACTCAGCAACAACAACATC+TGG | - | chr1_1:53121664-53121683 | Msa0028330:intron | 40.0% | |
| !! | TCATTGTGTTGCTTCGCAAA+CGG | - | chr1_1:53121697-53121716 | Msa0028330:intron | 40.0% |
| AAGTTCAATTGGGAACCCTA+AGG | - | chr1_1:53122055-53122074 | Msa0028330:intron | 40.0% | |
| AGTTCAATTGGGAACCCTAA+GGG | - | chr1_1:53122056-53122075 | Msa0028330:intron | 40.0% | |
| !! | TCTCTTCAGCCTCCATTTTT+AGG | - | chr1_1:53122207-53122226 | Msa0028330:intron | 40.0% |
| ATGCACAAAAGATTGTGGTG+TGG | + | chr1_1:53122303-53122322 | None:intergenic | 40.0% | |
| !! | ATAGTTTCTGGCCTCAAACA+AGG | - | chr1_1:53122321-53122340 | Msa0028330:intron | 40.0% |
| GAGGTAGTAGGTAGGATAAT+AGG | + | chr1_1:53122378-53122397 | None:intergenic | 40.0% | |
| !!! | GCAGAGTTTTGGAACTCTAT+TGG | - | chr1_1:53122549-53122568 | Msa0028330:intron | 40.0% |
| AGTAACTGAAAACCCTGGAA+AGG | + | chr1_1:53122616-53122635 | None:intergenic | 40.0% | |
| TGAGGAAGGAAAAGAAGGTA+GGG | + | chr1_1:53122656-53122675 | None:intergenic | 40.0% | |
| TTGAGGAAGGAAAAGAAGGT+AGG | + | chr1_1:53122657-53122676 | None:intergenic | 40.0% | |
| TCTACCCAATGCCTATCTAT+GGG | - | chr1_1:53122754-53122773 | Msa0028330:intron | 40.0% | |
| CCATTGAGTATACCTGTGAT+TGG | + | chr1_1:53122787-53122806 | None:intergenic | 40.0% | |
| CCAATCACAGGTATACTCAA+TGG | - | chr1_1:53122784-53122803 | Msa0028330:intron | 40.0% | |
| GCAGAAGACTTAATGGAGTT+TGG | - | chr1_1:53123019-53123038 | Msa0028330:intron | 40.0% | |
| GTTTGGACAAAAGGTTGTTC+TGG | - | chr1_1:53123036-53123055 | Msa0028330:intron | 40.0% | |
| ! | GATGCACTTTTCATTCCTGA+AGG | - | chr1_1:53123067-53123086 | Msa0028330:intron | 40.0% |
| ! | CACTTTTCATTCCTGAAGGA+TGG | - | chr1_1:53123071-53123090 | Msa0028330:intron | 40.0% |
| TTCATTCCTGAAGGATGGTA+AGG | - | chr1_1:53123076-53123095 | Msa0028330:intron | 40.0% | |
| TATAGACCTTACCATCCTTC+AGG | + | chr1_1:53123085-53123104 | None:intergenic | 40.0% | |
| GTGATAAGCCTTTCTGTTTC+TGG | - | chr1_1:53123121-53123140 | Msa0028330:intron | 40.0% | |
| TCTTCCATATTTGGCAGACA+TGG | - | chr1_1:53123156-53123175 | Msa0028330:intron | 40.0% | |
| ATATTTGGCAGACATGGACA+GGG | - | chr1_1:53123162-53123181 | Msa0028330:intron | 40.0% | |
| !! | GTTTTCTGGGAATTCTGTAC+TGG | - | chr1_1:53123226-53123245 | Msa0028330:intron | 40.0% |
| AATCTAGTGCAGAACCTCTA+TGG | + | chr1_1:53123331-53123350 | None:intergenic | 40.0% | |
| TGTACGGTTAGACAGTTACA+GGG | + | chr1_1:53123359-53123378 | None:intergenic | 40.0% | |
| TTGTACGGTTAGACAGTTAC+AGG | + | chr1_1:53123360-53123379 | None:intergenic | 40.0% | |
| TAACTGTCTAACCGTACAAC+TGG | - | chr1_1:53123361-53123380 | Msa0028330:CDS | 40.0% | |
| CGAAGATATAGGAGTGAAAC+AGG | + | chr1_1:53123851-53123870 | None:intergenic | 40.0% | |
| AATGAAAAGGACCATGATCC+TGG | + | chr1_1:53123898-53123917 | None:intergenic | 40.0% | |
| CCTTACAAAACCGTTTCGTA+AGG | + | chr1_1:53124163-53124182 | None:intergenic | 40.0% | |
| !! | CCTTACGAAACGGTTTTGTA+AGG | - | chr1_1:53124160-53124179 | Msa0028330:intron | 40.0% |
| AGGACATATCACATCCGATT+TGG | - | chr1_1:53124216-53124235 | Msa0028330:intron | 40.0% | |
| GGACATATCACATCCGATTT+GGG | - | chr1_1:53124217-53124236 | Msa0028330:intron | 40.0% | |
| ! | GACATATCACATCCGATTTG+GGG | - | chr1_1:53124218-53124237 | Msa0028330:intron | 40.0% |
| GTGTGATAAGATCCCCAAAT+CGG | + | chr1_1:53124233-53124252 | None:intergenic | 40.0% | |
| CAGGTAACACTTCGATATTC+AGG | + | chr1_1:53124271-53124290 | None:intergenic | 40.0% | |
| ! | ATATCGAAGTGTTACCTGAG+TGG | - | chr1_1:53124273-53124292 | Msa0028330:intron | 40.0% |
| TTGAGACTTGAGTCTCATAC+TGG | + | chr1_1:53124443-53124462 | None:intergenic | 40.0% | |
| TCCTACTGCAAAATACGGTT+GGG | + | chr1_1:53124491-53124510 | None:intergenic | 40.0% | |
| ATCCTACTGCAAAATACGGT+TGG | + | chr1_1:53124492-53124511 | None:intergenic | 40.0% | |
| AATCGTCACTATCTACTTGG+TGG | + | chr1_1:53124668-53124687 | None:intergenic | 40.0% | |
| CATCATGCAAGACATTGTGT+TGG | + | chr1_1:53124721-53124740 | None:intergenic | 40.0% | |
| CAACACAATGTCTTGCATGA+TGG | - | chr1_1:53124719-53124738 | Msa0028330:intron | 40.0% | |
| ! | GTCTTGCATGATGGAACATA+TGG | - | chr1_1:53124728-53124747 | Msa0028330:intron | 40.0% |
| TCATTTGCCTGTTGATCCAA+TGG | - | chr1_1:53124881-53124900 | Msa0028330:intron | 40.0% | |
| AATGCATCCATTGGATCAAC+AGG | + | chr1_1:53124891-53124910 | None:intergenic | 40.0% | |
| ! | TTCATTTGTATTGGTGGGGT+TGG | - | chr1_1:53125001-53125020 | Msa0028330:intron | 40.0% |
| CAAGAGAGAAAGGAACATCA+TGG | + | chr1_1:53125171-53125190 | None:intergenic | 40.0% | |
| ATGTTCCTTTCTCTCTTGTG+TGG | - | chr1_1:53125173-53125192 | Msa0028330:intron | 40.0% | |
| !! | TTGCAAATGGTTGATGAAGC+AGG | - | chr1_1:53125253-53125272 | Msa0028330:intron | 40.0% |
| TTTCTGAGTGTGAAGAATGG+AGG | - | chr1_1:53125489-53125508 | Msa0028330:intron | 40.0% | |
| TTCTGAGTGTGAAGAATGGA+GGG | - | chr1_1:53125490-53125509 | Msa0028330:intron | 40.0% | |
| GACCAGCAACTGCTAAAATT+GGG | - | chr1_1:53125639-53125658 | Msa0028330:intron | 40.0% | |
| ACCAGCAACTGCTAAAATTG+GGG | - | chr1_1:53125640-53125659 | Msa0028330:intron | 40.0% | |
| CAACTGCTAAAATTGGGGAT+GGG | - | chr1_1:53125645-53125664 | Msa0028330:intron | 40.0% | |
| AATTGGGGATGGGAAAAACT+AGG | - | chr1_1:53125655-53125674 | Msa0028330:intron | 40.0% | |
| ! | CAATTTTCATCAGCGTGATC+TGG | + | chr1_1:53125840-53125859 | None:intergenic | 40.0% |
| CAGTCAGATGTTGAAAGGAA+TGG | - | chr1_1:53125860-53125879 | Msa0028330:intron | 40.0% | |
| TTGACAGTGATTGTTGATCC+TGG | + | chr1_1:53125998-53126017 | None:intergenic | 40.0% | |
| ATCCAGTTGCCAAAATTCTC+TGG | - | chr1_1:53126090-53126109 | Msa0028330:intron | 40.0% | |
| !! | TTCCAGAGAATTTTGGCAAC+TGG | + | chr1_1:53126095-53126114 | None:intergenic | 40.0% |
| CTTCTTTGTACTGTGAACCA+TGG | - | chr1_1:53126194-53126213 | Msa0028330:intron | 40.0% | |
| GGGAGACCAATGAAAATTGT+TGG | - | chr1_1:53126504-53126523 | Msa0028330:intron | 40.0% | |
| !! | TGTTGGCTCAACCATTAAGA+AGG | - | chr1_1:53126521-53126540 | Msa0028330:intron | 40.0% |
| ! | GTATGACTGATTCCAACTAG+TGG | - | chr1_1:53126616-53126635 | Msa0028330:intron | 40.0% |
| TGATTCCAACTAGTGGGAAA+AGG | - | chr1_1:53126623-53126642 | Msa0028330:intron | 40.0% | |
| ! | TAACACCTTTTCCCACTAGT+TGG | + | chr1_1:53126631-53126650 | None:intergenic | 40.0% |
| CCACGGCATGATTAAATACA+AGG | + | chr1_1:53126793-53126812 | None:intergenic | 40.0% | |
| CCTTGTATTTAATCATGCCG+TGG | - | chr1_1:53126790-53126809 | Msa0028330:intron | 40.0% | |
| CAACTTCCCAAGAACTTTAG+AGG | - | chr1_1:53126882-53126901 | Msa0028330:intron | 40.0% | |
| TGCATGTACTATCACCAGTT+GGG | - | chr1_1:53126914-53126933 | Msa0028330:intron | 40.0% | |
| !! | TTGGTCGCCTTTTTAATTGC+AGG | - | chr1_1:53127069-53127088 | Msa0028330:intron | 40.0% |
| TTGCAGGAATAGATTCTACG+AGG | - | chr1_1:53127085-53127104 | Msa0028330:intron | 40.0% | |
| ! | GAATTCTATTCTGAAGGGGA+AGG | - | chr1_1:53127145-53127164 | Msa0028330:intron | 40.0% |
| TTCGTCCATATTTACCCTTC+TGG | - | chr1_1:53127230-53127249 | Msa0028330:intron | 40.0% | |
| ACACACCAGAAGGGTAAATA+TGG | + | chr1_1:53127238-53127257 | None:intergenic | 40.0% | |
| TCTAAGTACACACACCAGAA+GGG | + | chr1_1:53127247-53127266 | None:intergenic | 40.0% | |
| GTGTACTTAGAGTCACATGA+AGG | - | chr1_1:53127256-53127275 | Msa0028330:intron | 40.0% | |
| AAGGAAGAGAGAAATGCACA+CGG | - | chr1_1:53127698-53127717 | Msa0028330:intron | 40.0% | |
| ! | GGGTTCACTCACAAAAGTTT+TGG | - | chr1_1:53127731-53127750 | Msa0028330:intron | 40.0% |
| ! | CCCTGAAGCATTCTTTGTAT+TGG | - | chr1_1:53127832-53127851 | Msa0028330:intron | 40.0% |
| CTAGGGCAAAGAACATTGTA+AGG | + | chr1_1:53127877-53127896 | None:intergenic | 40.0% | |
| CAATGTTCTTTGCCCTAGAT+AGG | - | chr1_1:53127879-53127898 | Msa0028330:intron | 40.0% | |
| TTTATTGCGTGTTAGCTGAG+AGG | + | chr1_1:53127930-53127949 | None:intergenic | 40.0% | |
| !! | GTGAAGGTTGTTTTCTCCAT+AGG | + | chr1_1:53128096-53128115 | None:intergenic | 40.0% |
| TTTGAGGGGAGGAAAAGAAT+TGG | + | chr1_1:53128144-53128163 | None:intergenic | 40.0% | |
| ATCAGTTCCATACAGTGGAA+AGG | + | chr1_1:53128177-53128196 | None:intergenic | 40.0% | |
| CAGAATGGGGAATAACAGAA+CGG | + | chr1_1:53128237-53128256 | None:intergenic | 40.0% | |
| AACAACGGCAACATCAGAAT+GGG | + | chr1_1:53128251-53128270 | None:intergenic | 40.0% | |
| TAACAACGGCAACATCAGAA+TGG | + | chr1_1:53128252-53128271 | None:intergenic | 40.0% | |
| AACATTGGGCCACAAAGAAT+GGG | + | chr1_1:53128304-53128323 | None:intergenic | 40.0% | |
| TGGTATGGTCAAGTATTCCA+AGG | + | chr1_1:53128455-53128474 | None:intergenic | 40.0% | |
| CAAGAGTAGTGCATTGTACA+TGG | + | chr1_1:53128934-53128953 | None:intergenic | 40.0% | |
| AAAGTCTCAATGCACATGCA+GGG | + | chr1_1:53129283-53129302 | None:intergenic | 40.0% | |
| TAAAGTCTCAATGCACATGC+AGG | + | chr1_1:53129284-53129303 | None:intergenic | 40.0% | |
| ! | AATCTAGAATGCTCAAAGCC+AGG | - | chr1_1:53129565-53129584 | Msa0028330:CDS | 40.0% |
| ! | ATCTAGAATGCTCAAAGCCA+GGG | - | chr1_1:53129566-53129585 | Msa0028330:CDS | 40.0% |
| !! | TTTATTCTTCGGAGGTACCT+TGG | + | chr1_1:53129635-53129654 | None:intergenic | 40.0% |
| GATCCAACGAAGAAATGCTT+TGG | + | chr1_1:53129675-53129694 | None:intergenic | 40.0% | |
| GTATCAAATACATAGGGGCT+AGG | + | chr1_1:53129795-53129814 | None:intergenic | 40.0% | |
| GACTCGAAGTCGTTAGATGT+GGG | + | chr1_1:53120733-53120752 | None:intergenic | 45.0% | |
| AGACTCGAAGTCGTTAGATG+TGG | + | chr1_1:53120734-53120753 | None:intergenic | 45.0% | |
| TATGCGGTTGCACCAAAACT+TGG | - | chr1_1:53120886-53120905 | Msa0028330:three_prime_UTR | 45.0% | |
| TTATGGAATCCACGGAACGA+TGG | - | chr1_1:53120921-53120940 | Msa0028330:exon | 45.0% | |
| ! | TCGTCTGCACCTGTCTTTTA+TGG | - | chr1_1:53120999-53121018 | Msa0028330:intron | 45.0% |
| GTGATCTTGGAAGTCATCAC+AGG | - | chr1_1:53121021-53121040 | Msa0028330:intron | 45.0% | |
| !! | AGTTTTTCGGCCCGTTTGTT+TGG | - | chr1_1:53121141-53121160 | Msa0028330:intron | 45.0% |
| TCAGCAACAACAACATCTGG+AGG | - | chr1_1:53121667-53121686 | Msa0028330:intron | 45.0% | |
| TTTAGTGCGTGGATGGAACA+AGG | + | chr1_1:53121920-53121939 | None:intergenic | 45.0% | |
| CGTCTGAATGTCTTCCCTTA+GGG | + | chr1_1:53122073-53122092 | None:intergenic | 45.0% | |
| CCTAAGGGAAGACATTCAGA+CGG | - | chr1_1:53122071-53122090 | Msa0028330:intron | 45.0% | |
| GTGGTGAAAAAACCCATGCT+GGG | + | chr1_1:53122400-53122419 | None:intergenic | 45.0% | |
| AGTGGTGAAAAAACCCATGC+TGG | + | chr1_1:53122401-53122420 | None:intergenic | 45.0% | |
| TTTCACCACTGCAGAAATGC+AGG | - | chr1_1:53122411-53122430 | Msa0028330:intron | 45.0% | |
| GAGGAAGGAAAAGAAGGTAG+GGG | + | chr1_1:53122655-53122674 | None:intergenic | 45.0% | |
| AGGCTTGAGGAAGGAAAAGA+AGG | + | chr1_1:53122661-53122680 | None:intergenic | 45.0% | |
| !! | AATGGATTGAGGCTTGAGGA+AGG | + | chr1_1:53122670-53122689 | None:intergenic | 45.0% |
| !! | CAGAAATGGATTGAGGCTTG+AGG | + | chr1_1:53122674-53122693 | None:intergenic | 45.0% |
| !! | ATAGGCATTGGGTAGAGTGA+GGG | + | chr1_1:53122750-53122769 | None:intergenic | 45.0% |
| CTCTACCCAATGCCTATCTA+TGG | - | chr1_1:53122753-53122772 | Msa0028330:intron | 45.0% | |
| CTACCCAATGCCTATCTATG+GGG | - | chr1_1:53122755-53122774 | Msa0028330:intron | 45.0% | |
| CTTCCCCATAGATAGGCATT+GGG | + | chr1_1:53122761-53122780 | None:intergenic | 45.0% | |
| TTGGAAGCTTCCCCATAGAT+AGG | + | chr1_1:53122768-53122787 | None:intergenic | 45.0% | |
| TCCAAGGGCAGAAGACTTAA+TGG | - | chr1_1:53123012-53123031 | Msa0028330:intron | 45.0% | |
| TCCATTAAGTCTTCTGCCCT+TGG | + | chr1_1:53123016-53123035 | None:intergenic | 45.0% | |
| TGGACAAAAGGTTGTTCTGG+AGG | - | chr1_1:53123039-53123058 | Msa0028330:intron | 45.0% | |
| CTGTCCATGTCTGCCAAATA+TGG | + | chr1_1:53123163-53123182 | None:intergenic | 45.0% | |
| CATATTTGGCAGACATGGAC+AGG | - | chr1_1:53123161-53123180 | Msa0028330:intron | 45.0% | |
| AGACATGGACAGGGAAACTT+GGG | - | chr1_1:53123171-53123190 | Msa0028330:intron | 45.0% | |
| GATCAGCATGATCACCATAG+AGG | - | chr1_1:53123314-53123333 | Msa0028330:intron | 45.0% | |
| AATGGTGACTGACACACTAG+AGG | - | chr1_1:53123404-53123423 | Msa0028330:CDS | 45.0% | |
| ACAGAGATGCAAAAGCTCTC+TGG | - | chr1_1:53123518-53123537 | Msa0028330:intron | 45.0% | |
| TTCTGTGTCAGCACAGCATT+GGG | + | chr1_1:53123589-53123608 | None:intergenic | 45.0% | |
| ATTCTGTGTCAGCACAGCAT+TGG | + | chr1_1:53123590-53123609 | None:intergenic | 45.0% | |
| ! | GTCATCTTTTCCTTGACTCC+AGG | - | chr1_1:53123877-53123896 | Msa0028330:intron | 45.0% |
| TTTCCTTGACTCCAGGATCA+TGG | - | chr1_1:53123884-53123903 | Msa0028330:intron | 45.0% | |
| ! | ATTCAGGTTTGAGCGTGAGA+GGG | + | chr1_1:53124255-53124274 | None:intergenic | 45.0% |
| ! | TATTCAGGTTTGAGCGTGAG+AGG | + | chr1_1:53124256-53124275 | None:intergenic | 45.0% |
| ACGAGTGACCCAATGAATCT+TGG | - | chr1_1:53124302-53124321 | Msa0028330:intron | 45.0% | |
| CTGGAGGTGATCATGTGATA+AGG | + | chr1_1:53124424-53124443 | None:intergenic | 45.0% | |
| AGACTTGAGTCTCATACTGG+AGG | + | chr1_1:53124440-53124459 | None:intergenic | 45.0% | |
| TACTGCAAAATACGGTTGGG+TGG | + | chr1_1:53124488-53124507 | None:intergenic | 45.0% | |
| ! | ACCCAACCGTATTTTGCAGT+AGG | - | chr1_1:53124487-53124506 | Msa0028330:CDS | 45.0% |
| CGCAGAATATTGAGACGGTA+TGG | - | chr1_1:53124765-53124784 | Msa0028330:intron | 45.0% | |
| GATCCAATGGATGCATTCGA+AGG | - | chr1_1:53124894-53124913 | Msa0028330:intron | 45.0% | |
| CAACCTTCGAATGCATCCAT+TGG | + | chr1_1:53124900-53124919 | None:intergenic | 45.0% | |
| TGCTACCACACAAGAGAGAA+AGG | + | chr1_1:53125181-53125200 | None:intergenic | 45.0% | |
| TCTGAGTGTGAAGAATGGAG+GGG | - | chr1_1:53125491-53125510 | Msa0028330:intron | 45.0% | |
| GGACCAGCAACTGCTAAAAT+TGG | - | chr1_1:53125638-53125657 | Msa0028330:intron | 45.0% | |
| !! | TCCCCAATTTTAGCAGTTGC+TGG | + | chr1_1:53125644-53125663 | None:intergenic | 45.0% |
| GCAACTGCTAAAATTGGGGA+TGG | - | chr1_1:53125644-53125663 | Msa0028330:intron | 45.0% | |
| GCTTCATGAACTCGTGTCTT+TGG | - | chr1_1:53125950-53125969 | Msa0028330:intron | 45.0% | |
| CAAGTAGTTCCCTTTCAAGC+AGG | + | chr1_1:53126425-53126444 | None:intergenic | 45.0% | |
| ! | ATGCTTGGGCTAGATGAGAT+TGG | - | chr1_1:53126706-53126725 | Msa0028330:intron | 45.0% |
| ! | TGCTTGGGCTAGATGAGATT+GGG | - | chr1_1:53126707-53126726 | Msa0028330:intron | 45.0% |
| !! | CGAGAGCCTCTAAAGTTCTT+GGG | + | chr1_1:53126891-53126910 | None:intergenic | 45.0% |
| !! | ACGAGAGCCTCTAAAGTTCT+TGG | + | chr1_1:53126892-53126911 | None:intergenic | 45.0% |
| CTGCATGTACTATCACCAGT+TGG | - | chr1_1:53126913-53126932 | Msa0028330:intron | 45.0% | |
| GCATGTACTATCACCAGTTG+GGG | - | chr1_1:53126915-53126934 | Msa0028330:intron | 45.0% | |
| TTGGGGCTGAAGTTCTTACA+CGG | - | chr1_1:53126932-53126951 | Msa0028330:intron | 45.0% | |
| GAAGGAGCTATTCACACAAC+AGG | - | chr1_1:53127163-53127182 | Msa0028330:intron | 45.0% | |
| CTCTAAGTACACACACCAGA+AGG | + | chr1_1:53127248-53127267 | None:intergenic | 45.0% | |
| CTGATGGAATGACACATCCT+AGG | - | chr1_1:53127418-53127437 | Msa0028330:intron | 45.0% | |
| !! | TTGTAAGGTATTGCACGGAG+AGG | + | chr1_1:53127862-53127881 | None:intergenic | 45.0% |
| !! | TTAGCTGAGAGGTGTTACTG+GGG | + | chr1_1:53127919-53127938 | None:intergenic | 45.0% |
| !! | GTTAGCTGAGAGGTGTTACT+GGG | + | chr1_1:53127920-53127939 | None:intergenic | 45.0% |
| !! | TGTTAGCTGAGAGGTGTTAC+TGG | + | chr1_1:53127921-53127940 | None:intergenic | 45.0% |
| GGAGAAAACAACCTTCACCA+AGG | - | chr1_1:53128098-53128117 | Msa0028330:intron | 45.0% | |
| GAAAAGCTTTGCCTTGGTGA+AGG | + | chr1_1:53128112-53128131 | None:intergenic | 45.0% | |
| ! | GTAACGGAAAAGCTTTGCCT+TGG | + | chr1_1:53128118-53128137 | None:intergenic | 45.0% |
| TTCCATACAGTGGAAAGGTG+GGG | + | chr1_1:53128172-53128191 | None:intergenic | 45.0% | |
| GTTCCATACAGTGGAAAGGT+GGG | + | chr1_1:53128173-53128192 | None:intergenic | 45.0% | |
| AGTTCCATACAGTGGAAAGG+TGG | + | chr1_1:53128174-53128193 | None:intergenic | 45.0% | |
| AGGGAATCAGTTCCATACAG+TGG | + | chr1_1:53128182-53128201 | None:intergenic | 45.0% | |
| ATGTGTCAATTGGAGAGTGG+AGG | + | chr1_1:53128212-53128231 | None:intergenic | 45.0% | |
| GACATGTGTCAATTGGAGAG+TGG | + | chr1_1:53128215-53128234 | None:intergenic | 45.0% | |
| CAGAACGGACATGTGTCAAT+TGG | + | chr1_1:53128222-53128241 | None:intergenic | 45.0% | |
| ACAACGGCAACATCAGAATG+GGG | + | chr1_1:53128250-53128269 | None:intergenic | 45.0% | |
| GAACATTGGGCCACAAAGAA+TGG | + | chr1_1:53128305-53128324 | None:intergenic | 45.0% | |
| AGGAAAATAAGGGGGAGCAA+GGG | + | chr1_1:53128366-53128385 | None:intergenic | 45.0% | |
| AAGGAAAATAAGGGGGAGCA+AGG | + | chr1_1:53128367-53128386 | None:intergenic | 45.0% | |
| GTCAAGTATTCCAAGGCAAG+TGG | + | chr1_1:53128448-53128467 | None:intergenic | 45.0% | |
| CATGCACTGAAACAGTGATG+AGG | + | chr1_1:53129242-53129261 | None:intergenic | 45.0% | |
| TGTTTCAGTGCATGAGTCTC+TGG | - | chr1_1:53129248-53129267 | Msa0028330:intron | 45.0% | |
| ! | TCTAGAATGCTCAAAGCCAG+GGG | - | chr1_1:53129567-53129586 | Msa0028330:CDS | 45.0% |
| ATGAATGAATTGGCCCACCA+AGG | - | chr1_1:53129615-53129634 | Msa0028330:CDS | 45.0% | |
| CGTAACAGCAGCACCAACAT+TGG | + | chr1_1:53120590-53120609 | None:intergenic | 50.0% | |
| ! | ATCTTCTGTGGTGGAGGCTA+TGG | - | chr1_1:53120971-53120990 | Msa0028330:CDS | 50.0% |
| GTAGAGGAACCTGCAATGCA+AGG | + | chr1_1:53121598-53121617 | None:intergenic | 50.0% | |
| CCGTCTGAATGTCTTCCCTT+AGG | + | chr1_1:53122074-53122093 | None:intergenic | 50.0% | |
| TACCTACTACCTCCCAGCAT+GGG | - | chr1_1:53122385-53122404 | Msa0028330:intron | 50.0% | |
| GTGAAAAAACCCATGCTGGG+AGG | + | chr1_1:53122397-53122416 | None:intergenic | 50.0% | |
| AAGCACCTGCATTTCTGCAG+TGG | + | chr1_1:53122419-53122438 | None:intergenic | 50.0% | |
| ! | TAGAGTGAGGGACTAGCAGA+AGG | + | chr1_1:53122738-53122757 | None:intergenic | 50.0% |
| !! | GATAGGCATTGGGTAGAGTG+AGG | + | chr1_1:53122751-53122770 | None:intergenic | 50.0% |
| GCTTCCCCATAGATAGGCAT+TGG | + | chr1_1:53122762-53122781 | None:intergenic | 50.0% | |
| ATGGGGAAGCTTCCAATCAC+AGG | - | chr1_1:53122772-53122791 | Msa0028330:intron | 50.0% | |
| !! | CAAAAGGTTGTTCTGGAGGC+AGG | - | chr1_1:53123043-53123062 | Msa0028330:intron | 50.0% |
| CAGACATGGACAGGGAAACT+TGG | - | chr1_1:53123170-53123189 | Msa0028330:intron | 50.0% | |
| ACTGGCAGTTGCCAGTTGTA+CGG | + | chr1_1:53123375-53123394 | None:intergenic | 50.0% | |
| TGGCAACTGCCAGTTACCTA+GGG | - | chr1_1:53123381-53123400 | Msa0028330:CDS | 50.0% | |
| ACTGCCAGTTACCTAGGGAA+TGG | - | chr1_1:53123386-53123405 | Msa0028330:CDS | 50.0% | |
| GTCACCATTCCCTAGGTAAC+TGG | + | chr1_1:53123393-53123412 | None:intergenic | 50.0% | |
| TGTGTCAGTCACCATTCCCT+AGG | + | chr1_1:53123400-53123419 | None:intergenic | 50.0% | |
| TTGTAGGTGAGTGATCCCTC+AGG | + | chr1_1:53123812-53123831 | None:intergenic | 50.0% | |
| TCACTCGTTACTGTCCACTC+AGG | + | chr1_1:53124290-53124309 | None:intergenic | 50.0% | |
| GGTCTGATTTAGACACGCAG+AGG | + | chr1_1:53125295-53125314 | None:intergenic | 50.0% | |
| GCGAACACGCTTCCTAAGAA+TGG | - | chr1_1:53125684-53125703 | Msa0028330:intron | 50.0% | |
| ATTAGAACCTGCTGCAGTCC+AGG | - | chr1_1:53125926-53125945 | Msa0028330:intron | 50.0% | |
| ! | ACACGAGTTCATGAAGCACC+TGG | + | chr1_1:53125947-53125966 | None:intergenic | 50.0% |
| CAGTGATTGTTGATCCTGGC+TGG | + | chr1_1:53125994-53126013 | None:intergenic | 50.0% | |
| TTGTACTGTGAACCATGGCG+TGG | - | chr1_1:53126199-53126218 | Msa0028330:intron | 50.0% | |
| TGTACTGTGAACCATGGCGT+GGG | - | chr1_1:53126200-53126219 | Msa0028330:intron | 50.0% | |
| TAGCTAAAACACCCACGCCA+TGG | + | chr1_1:53126214-53126233 | None:intergenic | 50.0% | |
| GTAAGAACTTCAGCCCCAAC+TGG | + | chr1_1:53126931-53126950 | None:intergenic | 50.0% | |
| CCTAGAGAGGCTCCTATCTA+GGG | + | chr1_1:53127894-53127913 | None:intergenic | 50.0% | |
| CAACTAGACTGCTCTCCCTA+TGG | - | chr1_1:53128077-53128096 | Msa0028330:intron | 50.0% | |
| AAAGGTGGGGGTCTGTTTGA+GGG | + | chr1_1:53128159-53128178 | None:intergenic | 50.0% | |
| TCCATACAGTGGAAAGGTGG+GGG | + | chr1_1:53128171-53128190 | None:intergenic | 50.0% | |
| CCACAAAGAATGGGCCTACA+AGG | + | chr1_1:53128295-53128314 | None:intergenic | 50.0% | |
| CCTTGTAGGCCCATTCTTTG+TGG | - | chr1_1:53128292-53128311 | Msa0028330:CDS | 50.0% | |
| TTGTGGCCCAATGTTCTCCT+CGG | - | chr1_1:53128309-53128328 | Msa0028330:intron | 50.0% | |
| AAATAAGGGGGAGCAAGGGT+GGG | + | chr1_1:53128362-53128381 | None:intergenic | 50.0% | |
| AAAATAAGGGGGAGCAAGGG+TGG | + | chr1_1:53128363-53128382 | None:intergenic | 50.0% | |
| !! | ACCGGTGCTGTAAAGAACAC+TGG | - | chr1_1:53128716-53128735 | Msa0028330:intron | 50.0% |
| CCCAGTGTTCTTTACAGCAC+CGG | + | chr1_1:53128720-53128739 | None:intergenic | 50.0% | |
| !! | CCGGTGCTGTAAAGAACACT+GGG | - | chr1_1:53128717-53128736 | Msa0028330:intron | 50.0% |
| AGTGCATGAGTCTCTGGCAT+TGG | - | chr1_1:53129254-53129273 | Msa0028330:intron | 50.0% | |
| TTAGCATCTCATCTGACCCC+TGG | + | chr1_1:53129586-53129605 | None:intergenic | 50.0% | |
| !! | TTCTTCGGAGGTACCTTGGT+GGG | + | chr1_1:53129631-53129650 | None:intergenic | 50.0% |
| !! | ATTCTTCGGAGGTACCTTGG+TGG | + | chr1_1:53129632-53129651 | None:intergenic | 50.0% |
| GATTACTTGCAGGCACGGGT+AGG | - | chr1_1:53120948-53120967 | Msa0028330:CDS | 55.0% | |
| ACGGGTAGGATCTTCTGTGG+TGG | - | chr1_1:53120962-53120981 | Msa0028330:CDS | 55.0% | |
| GGTAGGATCTTCTGTGGTGG+AGG | - | chr1_1:53120965-53120984 | Msa0028330:CDS | 55.0% | |
| CATGCTGGGAGGTAGTAGGT+AGG | + | chr1_1:53122386-53122405 | None:intergenic | 55.0% | |
| CTACCTACTACCTCCCAGCA+TGG | - | chr1_1:53122384-53122403 | Msa0028330:intron | 55.0% | |
| AACCCATGCTGGGAGGTAGT+AGG | + | chr1_1:53122390-53122409 | None:intergenic | 55.0% | |
| ! | AGTGAGGGACTAGCAGAAGG+AGG | + | chr1_1:53122735-53122754 | None:intergenic | 55.0% |
| CTGGCAACTGCCAGTTACCT+AGG | - | chr1_1:53123380-53123399 | Msa0028330:CDS | 55.0% | |
| GGACCATGATCCTGGAGTCA+AGG | + | chr1_1:53123890-53123909 | None:intergenic | 55.0% | |
| ! | GTATTGGTGGGGTTGGAGAG+TGG | - | chr1_1:53125008-53125027 | Msa0028330:intron | 55.0% |
| GTGGGGTTGGAGAGTGGATA+CGG | - | chr1_1:53125014-53125033 | Msa0028330:intron | 55.0% | |
| CTTCAGGGTGAAGCTTGAGC+AGG | + | chr1_1:53127820-53127839 | None:intergenic | 55.0% | |
| CCCTAGATAGGAGCCTCTCT+AGG | - | chr1_1:53127891-53127910 | Msa0028330:intron | 55.0% | |
| GCCTAGAGAGGCTCCTATCT+AGG | + | chr1_1:53127895-53127914 | None:intergenic | 55.0% | |
| TGTTACTGGGGAGCCTAGAG+AGG | + | chr1_1:53127907-53127926 | None:intergenic | 55.0% | |
| AAGGTGGGGGTCTGTTTGAG+GGG | + | chr1_1:53128158-53128177 | None:intergenic | 55.0% | |
| GAAAGGTGGGGGTCTGTTTG+AGG | + | chr1_1:53128160-53128179 | None:intergenic | 55.0% | |
| ACCCCCACCTTTCCACTGTA+TGG | - | chr1_1:53128167-53128186 | Msa0028330:intron | 55.0% | |
| GGAGAGTGGAGGATGAGACA+GGG | + | chr1_1:53128201-53128220 | None:intergenic | 55.0% | |
| TGGAGAGTGGAGGATGAGAC+AGG | + | chr1_1:53128202-53128221 | None:intergenic | 55.0% | |
| CCCAGACCGAGGAGAACATT+GGG | + | chr1_1:53128318-53128337 | None:intergenic | 55.0% | |
| CCCAATGTTCTCCTCGGTCT+GGG | - | chr1_1:53128315-53128334 | Msa0028330:intron | 55.0% | |
| TCCCAGACCGAGGAGAACAT+TGG | + | chr1_1:53128319-53128338 | None:intergenic | 55.0% | |
| TGCTGTATCATCCCAGACCG+AGG | + | chr1_1:53128329-53128348 | None:intergenic | 55.0% | |
| AATAAGGGGGAGCAAGGGTG+GGG | + | chr1_1:53128361-53128380 | None:intergenic | 55.0% | |
| GGCACGGGTAGGATCTTCTG+TGG | - | chr1_1:53120959-53120978 | Msa0028330:CDS | 60.0% | |
| ! | TGAAGCACCTGGACTGCAGC+AGG | + | chr1_1:53125936-53125955 | None:intergenic | 60.0% |
| CAACAGTGTTAGCGCCAGCC+AGG | - | chr1_1:53125977-53125996 | Msa0028330:intron | 60.0% | |
| GCCCAATGTTCTCCTCGGTC+TGG | - | chr1_1:53128314-53128333 | Msa0028330:intron | 60.0% | |
| GTGGGGGTCTGTTTGAGGGG+AGG | + | chr1_1:53128155-53128174 | None:intergenic | 65.0% | |
| GGAGCAAGGGTGGGGACGTG+GGG | + | chr1_1:53128353-53128372 | None:intergenic | 70.0% | |
| GGGAGCAAGGGTGGGGACGT+GGG | + | chr1_1:53128354-53128373 | None:intergenic | 70.0% | |
| GGGGAGCAAGGGTGGGGACG+TGG | + | chr1_1:53128355-53128374 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 53120484 | 53130052 | 53120484 | ID=Msa0028330;Name=Msa0028330 |
| chr1_1 | mRNA | 53120484 | 53130052 | 53120484 | ID=Msa0028330-mRNA-1;Parent=Msa0028330;Name=Msa0028330-mRNA-1;_AED=0.16;_eAED=0.16;_QI=207|0.84|0.78|1|0.76|0.71|14|455|536 |
| chr1_1 | exon | 53120484 | 53121007 | 53120484 | ID=Msa0028330-mRNA-1:exon:15655;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53123352 | 53123445 | 53123352 | ID=Msa0028330-mRNA-1:exon:15654;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53123541 | 53123656 | 53123541 | ID=Msa0028330-mRNA-1:exon:15653;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53124379 | 53124588 | 53124379 | ID=Msa0028330-mRNA-1:exon:15652;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53124595 | 53124695 | 53124595 | ID=Msa0028330-mRNA-1:exon:15651;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53124822 | 53124897 | 53124822 | ID=Msa0028330-mRNA-1:exon:15650;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53125742 | 53125874 | 53125742 | ID=Msa0028330-mRNA-1:exon:15649;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53127444 | 53127560 | 53127444 | ID=Msa0028330-mRNA-1:exon:15648;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53127743 | 53127815 | 53127743 | ID=Msa0028330-mRNA-1:exon:15647;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53128194 | 53128320 | 53128194 | ID=Msa0028330-mRNA-1:exon:15646;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53128444 | 53128512 | 53128444 | ID=Msa0028330-mRNA-1:exon:15645;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53128755 | 53128928 | 53128755 | ID=Msa0028330-mRNA-1:exon:15644;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53129493 | 53129654 | 53129493 | ID=Msa0028330-mRNA-1:exon:15643;Parent=Msa0028330-mRNA-1 |
| chr1_1 | exon | 53129756 | 53130052 | 53129756 | ID=Msa0028330-mRNA-1:exon:15642;Parent=Msa0028330-mRNA-1 |
| chr1_1 | five_prime_UTR | 53129846 | 53130052 | 53129846 | ID=Msa0028330-mRNA-1:five_prime_utr;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53129756 | 53129845 | 53129756 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53129493 | 53129654 | 53129493 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53128755 | 53128928 | 53128755 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53128444 | 53128512 | 53128444 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53128194 | 53128320 | 53128194 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53127743 | 53127815 | 53127743 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53127444 | 53127560 | 53127444 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53125742 | 53125874 | 53125742 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53124822 | 53124897 | 53124822 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53124595 | 53124695 | 53124595 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53124379 | 53124588 | 53124379 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53123541 | 53123656 | 53123541 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53123352 | 53123445 | 53123352 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | CDS | 53120939 | 53121007 | 53120939 | ID=Msa0028330-mRNA-1:cds;Parent=Msa0028330-mRNA-1 |
| chr1_1 | three_prime_UTR | 53120484 | 53120938 | 53120484 | ID=Msa0028330-mRNA-1:three_prime_utr;Parent=Msa0028330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
