Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076180 | sp|Q8RWR1|JMJ30_ARATH | 30.738 | 244 | 106 | 10 | 89 | 316 | 207 | 403 | 3.60e-16 | 84.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076180 | G7ICR6 | 85.185 | 540 | 41 | 4 | 63 | 564 | 1 | 539 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028330 | Msa0076180 | 0.844127 | 9.163044e-59 | -8.615850e-47 |
| Msa0076180 | Msa0095850 | 0.898600 | 4.527090e-77 | -8.615850e-47 |
| Msa0076180 | Msa0168580 | 0.863757 | 1.981974e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076180 | MtrunA17_Chr1g0185111 | 85.185 | 540 | 41 | 4 | 63 | 564 | 1 | 539 | 0.0 | 909 |
| Msa0076180 | MtrunA17_Chr4g0033081 | 40.146 | 137 | 66 | 6 | 184 | 316 | 263 | 387 | 1.45e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076180 | AT5G19840.1 | 46.704 | 531 | 226 | 9 | 69 | 556 | 10 | 526 | 6.64e-149 | 439 |
| Msa0076180 | AT5G19840.2 | 44.234 | 529 | 226 | 10 | 69 | 542 | 10 | 524 | 5.75e-132 | 396 |
| Msa0076180 | AT3G20810.3 | 30.738 | 244 | 106 | 10 | 89 | 316 | 196 | 392 | 2.24e-17 | 84.7 |
| Msa0076180 | AT3G20810.1 | 30.738 | 244 | 106 | 10 | 89 | 316 | 196 | 392 | 3.53e-17 | 84.3 |
| Msa0076180 | AT3G20810.2 | 30.738 | 244 | 106 | 10 | 89 | 316 | 207 | 403 | 3.66e-17 | 84.3 |
Find 155 sgRNAs with CRISPR-Local
Find 603 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAGAGCTTTCTCTTTA+TGG | 0.052884 | 1_2:+52075198 | Msa0076180:CDS |
| ATTGGGAGCTTCTTTATTTC+AGG | 0.161998 | 1_2:-52084178 | None:intergenic |
| GGACCAGCAACTGCTAAAAT+TGG | 0.210930 | 1_2:+52079911 | Msa0076180:CDS |
| GTTGAAAGGAATGGATTTAA+AGG | 0.248023 | 1_2:+52080142 | Msa0076180:CDS |
| TTACTTGCTCTTCCATTCTT+AGG | 0.256470 | 1_2:-52079969 | None:intergenic |
| TTTGACATTCCAGAGAATTT+TGG | 0.260261 | 1_2:-52080372 | None:intergenic |
| TATTTCAGGAAAATATTAAA+TGG | 0.260967 | 1_2:-52084164 | None:intergenic |
| TCCAAGGGCAGAAGACTTAA+TGG | 0.263974 | 1_2:+52077285 | Msa0076180:CDS |
| CTAGTTTAGCTAGTTCAAAT+TGG | 0.270035 | 1_2:-52084233 | None:intergenic |
| CTCTACCCAATGCCTATCTA+TGG | 0.271872 | 1_2:+52077026 | Msa0076180:CDS |
| CTAGTTTAGCTAGTTCAAAT+TGG | 0.291464 | 1_2:-52084196 | None:intergenic |
| GCTTCATGAACTCGTGTCTT+TGG | 0.293768 | 1_2:+52080223 | Msa0076180:CDS |
| AGAGAAAGCTCTCCAAGTTT+TGG | 0.315791 | 1_2:-52075192 | None:intergenic |
| CCGTCTGAATGTCTTCCCTT+AGG | 0.329877 | 1_2:-52076344 | None:intergenic |
| CAACTTCCCAAGAACTTTAG+AGG | 0.336480 | 1_2:+52081173 | Msa0076180:CDS |
| GCAGAAGACTTAATGGAGTT+TGG | 0.345127 | 1_2:+52077292 | Msa0076180:CDS |
| CCTTGGATAAATTGAGTAAT+CGG | 0.353609 | 1_2:-52077269 | None:intergenic |
| CTTGTACATTATTGATTAGT+TGG | 0.356663 | 1_2:+52084286 | Msa0076180:three_prime_UTR |
| TGCGCTAAATAAATTTGTTC+GGG | 0.359336 | 1_2:-52076031 | None:intergenic |
| GTTTGGACAAAAGGTTGTTC+TGG | 0.361014 | 1_2:+52077309 | Msa0076180:CDS |
| ACGAGAGCCTCTAAAGTTCT+TGG | 0.362653 | 1_2:-52081180 | None:intergenic |
| AGTGAACTTTATGAATGAAT+TGG | 0.363017 | 1_2:+52083901 | Msa0076180:three_prime_UTR |
| TTTGATCGTTTGAAGTTTGA+AGG | 0.368858 | 1_2:-52074959 | None:intergenic |
| CTTAATGGAGTTTGGACAAA+AGG | 0.372824 | 1_2:+52077300 | Msa0076180:CDS |
| AAATCAAGGAAAGTAGAAAA+TGG | 0.379020 | 1_2:-52075890 | None:intergenic |
| AACTGTCTTCTATAAATTTG+TGG | 0.379402 | 1_2:+52076511 | Msa0076180:CDS |
| CTGCGCTAAATAAATTTGTT+CGG | 0.380933 | 1_2:-52076032 | None:intergenic |
| TGCATGTACTATCACCAGTT+GGG | 0.384920 | 1_2:+52081205 | Msa0076180:CDS |
| TCCATTAAGTCTTCTGCCCT+TGG | 0.385486 | 1_2:-52077286 | None:intergenic |
| ATATGCATCAATTTATTCTT+CGG | 0.391730 | 1_2:-52083939 | None:intergenic |
| AATGTATTGGACAAATTTGT+GGG | 0.394832 | 1_2:+52083834 | Msa0076180:CDS |
| CGTCTGAATGTCTTCCCTTA+GGG | 0.396196 | 1_2:-52076343 | None:intergenic |
| AACAGTTGTTAGTGTTGTAT+AGG | 0.398057 | 1_2:+52084046 | Msa0076180:three_prime_UTR |
| TCGTAAGGAGAAAGTTCAAT+TGG | 0.399065 | 1_2:+52076317 | Msa0076180:CDS |
| TGGGAAGTTCTTCGTATCTT+CGG | 0.400011 | 1_2:-52075004 | None:intergenic |
| AACTTCAAACGATCAAAGTA+TGG | 0.400916 | 1_2:+52074965 | Msa0076180:CDS |
| TATAGACCTTACCATCCTTC+AGG | 0.402206 | 1_2:-52077355 | None:intergenic |
| CGATGGTTTAGATTACTTGC+AGG | 0.403301 | 1_2:+52075232 | Msa0076180:CDS |
| AAATGTATTGGACAAATTTG+TGG | 0.410927 | 1_2:+52083833 | Msa0076180:CDS |
| ATCTTCTGTGGTGGAGGCTA+TGG | 0.410951 | 1_2:+52075265 | Msa0076180:CDS |
| AAAGGAGAAAAGACTTAAAG+AGG | 0.411316 | 1_2:+52080160 | Msa0076180:CDS |
| GACCAGCAACTGCTAAAATT+GGG | 0.413196 | 1_2:+52079912 | Msa0076180:CDS |
| TAGTTTAGCTAGTTCAAATT+GGG | 0.416275 | 1_2:-52084195 | None:intergenic |
| CGATGTATCATGACGATTAG+TGG | 0.417703 | 1_2:-52074786 | None:intergenic |
| AACTCAGCAACAACAACATC+TGG | 0.418124 | 1_2:+52075937 | Msa0076180:CDS |
| CATATAACTTACCTTGTTTG+AGG | 0.419995 | 1_2:-52076605 | None:intergenic |
| TCCGTTTCTTACACAAATCA+AGG | 0.421905 | 1_2:-52075904 | None:intergenic |
| TTCAGTGTATCAAATACATA+GGG | 0.424971 | 1_2:-52084094 | None:intergenic |
| CTTGGATAAATTGAGTAATC+GGG | 0.430456 | 1_2:-52077268 | None:intergenic |
| TAGTTTAGCTAGTTCAAATT+GGG | 0.433414 | 1_2:-52084232 | None:intergenic |
| ATCCAGTTGCCAAAATTCTC+TGG | 0.437695 | 1_2:+52080363 | Msa0076180:CDS |
| AAACCAAAGCATTTCTTCGT+TGG | 0.439277 | 1_2:+52083965 | Msa0076180:three_prime_UTR |
| TTCTTCGGAGGTACCTTGGT+GGG | 0.440392 | 1_2:-52083924 | None:intergenic |
| TATGCGGTTGCACCAAAACT+TGG | 0.441510 | 1_2:+52075180 | Msa0076180:CDS |
| ATTAGAACCTGCTGCAGTCC+AGG | 0.441787 | 1_2:+52080199 | Msa0076180:CDS |
| ATAAATGATTATGATCTCAT+AGG | 0.445329 | 1_2:+52080296 | Msa0076180:CDS |
| GATCCAACGAAGAAATGCTT+TGG | 0.446004 | 1_2:-52083968 | None:intergenic |
| TCAAAATGTCTTTCTTGCTA+TGG | 0.460266 | 1_2:+52080406 | Msa0076180:CDS |
| TACACGGAAATTTGATGAGA+TGG | 0.460378 | 1_2:+52081239 | Msa0076180:CDS |
| CAGTCAGATGTTGAAAGGAA+TGG | 0.465665 | 1_2:+52080133 | Msa0076180:CDS |
| CAAAAGGTTGTTCTGGAGGC+AGG | 0.466338 | 1_2:+52077316 | Msa0076180:CDS |
| AAGGAGAAAAGACTTAAAGA+GGG | 0.467339 | 1_2:+52080161 | Msa0076180:CDS |
| CGAGAGCCTCTAAAGTTCTT+GGG | 0.468427 | 1_2:-52081179 | None:intergenic |
| TCCTTGATTTGTGTAAGAAA+CGG | 0.469402 | 1_2:+52075903 | Msa0076180:CDS |
| CCATTGAGTATACCTGTGAT+TGG | 0.477258 | 1_2:-52077057 | None:intergenic |
| TTCAGGAAAATATTAAATGG+TGG | 0.477903 | 1_2:-52084161 | None:intergenic |
| ATTCAGTGTATCAAATACAT+AGG | 0.480443 | 1_2:-52084095 | None:intergenic |
| GTATCAAATACATAGGGGCT+AGG | 0.484996 | 1_2:-52084088 | None:intergenic |
| TCAGGAAAATATTAAATGGT+GGG | 0.485206 | 1_2:-52084160 | None:intergenic |
| ATTTCAGATTTCACAAGAGA+GGG | 0.486527 | 1_2:-52074924 | None:intergenic |
| GTAAGAACTTCAGCCCCAAC+TGG | 0.503073 | 1_2:-52081219 | None:intergenic |
| GCTTCCCCATAGATAGGCAT+TGG | 0.503987 | 1_2:-52077032 | None:intergenic |
| TGAAGCACCTGGACTGCAGC+AGG | 0.504273 | 1_2:-52080206 | None:intergenic |
| TTTATTCTTCGGAGGTACCT+TGG | 0.505283 | 1_2:-52083928 | None:intergenic |
| CGTAAGGAGAAAGTTCAATT+GGG | 0.506701 | 1_2:+52076318 | Msa0076180:CDS |
| CAACAGTGTTAGCGCCAGCC+AGG | 0.511294 | 1_2:+52080250 | Msa0076180:CDS |
| GCGAACACGCTTCCTAAGAA+TGG | 0.516538 | 1_2:+52079957 | Msa0076180:CDS |
| TTGACAGTGATTGTTGATCC+TGG | 0.517753 | 1_2:-52080268 | None:intergenic |
| CAGTGATTGTTGATCCTGGC+TGG | 0.519786 | 1_2:-52080264 | None:intergenic |
| AGATTTCACAAGAGAGGGGA+AGG | 0.520345 | 1_2:-52074919 | None:intergenic |
| GACTGAGAGTTAATTGTCGT+GGG | 0.521563 | 1_2:+52074814 | Msa0076180:CDS |
| AATCTAGAATGCTCAAAGCC+AGG | 0.521753 | 1_2:+52083861 | Msa0076180:CDS |
| TTGGAAGCTTCCCCATAGAT+AGG | 0.523469 | 1_2:-52077038 | None:intergenic |
| CGAACAAATTTATTTAGCGC+AGG | 0.525937 | 1_2:+52076033 | Msa0076180:CDS |
| GAAGGAGCTATTCACACAAC+AGG | 0.526957 | 1_2:+52081454 | Msa0076180:CDS |
| TCATTGTGTTGCTTCGCAAA+CGG | 0.527120 | 1_2:+52075970 | Msa0076180:CDS |
| CTTTCTCTTTATGGAATCCA+CGG | 0.528143 | 1_2:+52075207 | Msa0076180:CDS |
| TCTACCCAATGCCTATCTAT+GGG | 0.528926 | 1_2:+52077027 | Msa0076180:CDS |
| CTGCATGTACTATCACCAGT+TGG | 0.532800 | 1_2:+52081204 | Msa0076180:CDS |
| AAGTTCAATTGGGAACCCTA+AGG | 0.532991 | 1_2:+52076328 | Msa0076180:CDS |
| ATCTAGAATGCTCAAAGCCA+GGG | 0.534129 | 1_2:+52083862 | Msa0076180:CDS |
| AGCAATGAATTCTATTCTGA+AGG | 0.535974 | 1_2:+52081430 | Msa0076180:CDS |
| ATGGGGAAGCTTCCAATCAC+AGG | 0.540697 | 1_2:+52077045 | Msa0076180:CDS |
| AATTGCAGTCAGATGTTGAA+AGG | 0.542508 | 1_2:+52080128 | Msa0076180:CDS |
| TTGTTCCTGAGTGTGAAGAA+TGG | 0.546045 | 1_2:+52079759 | Msa0076180:CDS |
| GCAATGAATTCTATTCTGAA+GGG | 0.548337 | 1_2:+52081431 | Msa0076180:CDS |
| TTAGCATCTCATCTGACCCC+TGG | 0.550595 | 1_2:-52083879 | None:intergenic |
| AATTTCAGATTTCACAAGAG+AGG | 0.551751 | 1_2:-52074925 | None:intergenic |
| CCGATTACTCAATTTATCCA+AGG | 0.551976 | 1_2:+52077269 | Msa0076180:CDS |
| GGTAGGATCTTCTGTGGTGG+AGG | 0.552390 | 1_2:+52075259 | Msa0076180:CDS |
| CTTCCCCATAGATAGGCATT+GGG | 0.552590 | 1_2:-52077031 | None:intergenic |
| CGACTGAGAGTTAATTGTCG+TGG | 0.554341 | 1_2:+52074813 | Msa0076180:CDS |
| CGTAACAGCAGCACCAACAT+TGG | 0.559634 | 1_2:-52074880 | None:intergenic |
| ATTCTTCGGAGGTACCTTGG+TGG | 0.562177 | 1_2:-52083925 | None:intergenic |
| GATGGATGAACTAACTATTG+AGG | 0.566538 | 1_2:+52081257 | Msa0076180:CDS |
| TGCATCAATTTATTCTTCGG+AGG | 0.571173 | 1_2:-52083936 | None:intergenic |
| AGTTCAATTGGGAACCCTAA+GGG | 0.576376 | 1_2:+52076329 | Msa0076180:CDS |
| AACTAACTATTGAGGAAGAT+CGG | 0.577756 | 1_2:+52081265 | Msa0076180:CDS |
| GTTTAGATTACTTGCAGGCA+CGG | 0.581262 | 1_2:+52075237 | Msa0076180:CDS |
| TCCTGAGTGTGAAGAATGGA+GGG | 0.582241 | 1_2:+52079763 | Msa0076180:CDS |
| AGGAAAGTAGAAAATGGTAG+AGG | 0.582577 | 1_2:-52075884 | None:intergenic |
| TATCAAATACATAGGGGCTA+GGG | 0.583187 | 1_2:-52084087 | None:intergenic |
| TTTAGATTACTTGCAGGCAC+GGG | 0.584855 | 1_2:+52075238 | Msa0076180:CDS |
| GATCATGAACAGTAATCGTA+AGG | 0.587526 | 1_2:+52076302 | Msa0076180:CDS |
| TTACGATTACTGTTCATGAT+CGG | 0.587845 | 1_2:-52076300 | None:intergenic |
| TTCCTGAGTGTGAAGAATGG+AGG | 0.590098 | 1_2:+52079762 | Msa0076180:CDS |
| TGGACAAAAGGTTGTTCTGG+AGG | 0.593855 | 1_2:+52077312 | Msa0076180:CDS |
| CAACTGCTAAAATTGGGGAC+GGG | 0.594076 | 1_2:+52079918 | Msa0076180:CDS |
| GACTCGAAGTCGTTAGATGT+GGG | 0.595951 | 1_2:-52075023 | None:intergenic |
| AAACTATGCACAAAAGATTG+TGG | 0.597530 | 1_2:-52076578 | None:intergenic |
| CCCCTCCATTCTTCACACTC+AGG | 0.597813 | 1_2:-52079764 | None:intergenic |
| AGACTCGAAGTCGTTAGATG+TGG | 0.598359 | 1_2:-52075024 | None:intergenic |
| CGATTACTCAATTTATCCAA+GGG | 0.598981 | 1_2:+52077270 | Msa0076180:CDS |
| GCAACTGCTAAAATTGGGGA+CGG | 0.598990 | 1_2:+52079917 | Msa0076180:CDS |
| GTACAAGACATAATTATACA+TGG | 0.599435 | 1_2:-52084270 | None:intergenic |
| AGGAGAAAAGACTTAAAGAG+GGG | 0.599672 | 1_2:+52080162 | Msa0076180:CDS |
| GCATGTACTATCACCAGTTG+GGG | 0.599762 | 1_2:+52081206 | Msa0076180:CDS |
| CAGGAAAATATTAAATGGTG+GGG | 0.602135 | 1_2:-52084159 | None:intergenic |
| TAGAGTGAGGGACTAGCAGA+AGG | 0.603258 | 1_2:-52077008 | None:intergenic |
| ACACGAGTTCATGAAGCACC+TGG | 0.605974 | 1_2:-52080217 | None:intergenic |
| GAATTCTATTCTGAAGGGGA+AGG | 0.607819 | 1_2:+52081436 | Msa0076180:CDS |
| ATAGTTTCTGGCCTCAAACA+AGG | 0.607916 | 1_2:+52076594 | Msa0076180:CDS |
| GATTACTTGCAGGCACGGGT+AGG | 0.611307 | 1_2:+52075242 | Msa0076180:CDS |
| ACCAGCAACTGCTAAAATTG+GGG | 0.623218 | 1_2:+52079913 | Msa0076180:CDS |
| CAATGAATTCTATTCTGAAG+GGG | 0.626132 | 1_2:+52081432 | Msa0076180:CDS |
| TTATGGAATCCACGGAACGA+TGG | 0.627037 | 1_2:+52075215 | Msa0076180:CDS |
| TTGGATAAATTGAGTAATCG+GGG | 0.627533 | 1_2:-52077267 | None:intergenic |
| GATAGGCATTGGGTAGAGTG+AGG | 0.631689 | 1_2:-52077021 | None:intergenic |
| ATGAATGAATTGGCCCACCA+AGG | 0.636345 | 1_2:+52083911 | Msa0076180:three_prime_UTR |
| TAATCTAAACCATCGTTCCG+TGG | 0.637577 | 1_2:-52075224 | None:intergenic |
| ATAGGCATTGGGTAGAGTGA+GGG | 0.639856 | 1_2:-52077020 | None:intergenic |
| TTTCAGATTTCACAAGAGAG+GGG | 0.653816 | 1_2:-52074923 | None:intergenic |
| GGCACGGGTAGGATCTTCTG+TGG | 0.658645 | 1_2:+52075253 | Msa0076180:CDS |
| TCAGCAACAACAACATCTGG+AGG | 0.661278 | 1_2:+52075940 | Msa0076180:CDS |
| AGTGAGGGACTAGCAGAAGG+AGG | 0.665357 | 1_2:-52077005 | None:intergenic |
| TTGGGGCTGAAGTTCTTACA+CGG | 0.669048 | 1_2:+52081223 | Msa0076180:CDS |
| CTACCCAATGCCTATCTATG+GGG | 0.674740 | 1_2:+52077028 | Msa0076180:CDS |
| ACGGGTAGGATCTTCTGTGG+TGG | 0.683705 | 1_2:+52075256 | Msa0076180:CDS |
| TCTAGAATGCTCAAAGCCAG+GGG | 0.685468 | 1_2:+52083863 | Msa0076180:CDS |
| CCTGAGTGTGAAGAATGGAG+GGG | 0.687190 | 1_2:+52079764 | Msa0076180:CDS |
| ACTGAGAGTTAATTGTCGTG+GGG | 0.709422 | 1_2:+52074815 | Msa0076180:CDS |
| ATGCACAAAAGATTGTGGTG+TGG | 0.710216 | 1_2:-52076573 | None:intergenic |
| TCAGTGTATCAAATACATAG+GGG | 0.710953 | 1_2:-52084093 | None:intergenic |
| CCTAAGGGAAGACATTCAGA+CGG | 0.717846 | 1_2:+52076344 | Msa0076180:CDS |
| TTGCAGGAATAGATTCTACG+AGG | 0.728407 | 1_2:+52081376 | Msa0076180:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAGTACTAATAT+TGG | - | chr1_2:52076126-52076145 | None:intergenic | 10.0% |
| !! | CATTAAATAAATTAAAACAT+CGG | - | chr1_2:52076771-52076790 | None:intergenic | 10.0% |
| !!! | TATTATTTTTTCATTTGTAT+TGG | + | chr1_2:52079265-52079284 | Msa0076180:intron | 10.0% |
| !!! | TTATGATTTTTTTTTTTAAG+AGG | + | chr1_2:52080530-52080549 | Msa0076180:intron | 10.0% |
| !! | AAATAATCATAATACTTAAA+TGG | - | chr1_2:52081794-52081813 | None:intergenic | 10.0% |
| !!! | ATTTTACATATTAAAAAAGT+TGG | + | chr1_2:52084318-52084337 | Msa0076180:three_prime_UTR | 10.0% |
| !!! | TTTTACATATTAAAAAAGTT+GGG | + | chr1_2:52084319-52084338 | Msa0076180:three_prime_UTR | 10.0% |
| !! | TAGAAATAGATTATACATAA+AGG | - | chr1_2:52075637-52075656 | None:intergenic | 15.0% |
| !! | AAATGAAAAAATAATAGTGT+AGG | - | chr1_2:52079261-52079280 | None:intergenic | 15.0% |
| !! | ATCTATTAAGTTTAGTAAAT+TGG | - | chr1_2:52081970-52081989 | None:intergenic | 15.0% |
| !! | TTATTATTCCAAAAATCTAT+TGG | - | chr1_2:52082914-52082933 | None:intergenic | 15.0% |
| !! | TAATAACATTTAATGTAGAT+AGG | + | chr1_2:52082928-52082947 | Msa0076180:intron | 15.0% |
| !!! | AAATAAAAAAACAGTTTGTT+TGG | - | chr1_2:52083394-52083413 | None:intergenic | 15.0% |
| !! | ATGTTAATTAAACTAATCAA+AGG | + | chr1_2:52083689-52083708 | Msa0076180:intron | 15.0% |
| !! | TATTTCAGGAAAATATTAAA+TGG | - | chr1_2:52084167-52084186 | None:intergenic | 15.0% |
| !!! | TTGATTTTTCTAACCTAAAA+AGG | + | chr1_2:52075154-52075173 | Msa0076180:intron | 20.0% |
| !!! | ACTTATTTGATTTTATCTAG+TGG | - | chr1_2:52075601-52075620 | None:intergenic | 20.0% |
| !! | AATAAGCTAAAATCAACTTA+TGG | + | chr1_2:52075735-52075754 | Msa0076180:intron | 20.0% |
| !! | GTTTAATTAAATGACAGAAA+TGG | - | chr1_2:52076961-52076980 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATAAAATTCTTG+TGG | + | chr1_2:52077223-52077242 | Msa0076180:intron | 20.0% |
| !!! | TTTTGTGTTTAAAATGCAAT+TGG | + | chr1_2:52078790-52078809 | Msa0076180:intron | 20.0% |
| !!! | TTACTATTGCTATTAACTTT+TGG | + | chr1_2:52078961-52078980 | Msa0076180:intron | 20.0% |
| !!! | TATTTTTTCATTTGTATTGG+TGG | + | chr1_2:52079268-52079287 | Msa0076180:intron | 20.0% |
| !!! | ATTTTTTCATTTGTATTGGT+GGG | + | chr1_2:52079269-52079288 | Msa0076180:intron | 20.0% |
| !!! | CATCTAAAAAATTCTGAAAA+AGG | - | chr1_2:52079404-52079423 | None:intergenic | 20.0% |
| !!! | AAGTTAGTTGTTTTTGTAAT+GGG | + | chr1_2:52079859-52079878 | Msa0076180:intron | 20.0% |
| !! | CAAGTAAGATAATTAGAAAA+TGG | + | chr1_2:52079985-52080004 | Msa0076180:intron | 20.0% |
| !!! | TAGAATTTAGTTTTCTTGTA+AGG | - | chr1_2:52080041-52080060 | None:intergenic | 20.0% |
| !! | ATAAATGATTATGATCTCAT+AGG | + | chr1_2:52080296-52080315 | Msa0076180:CDS | 20.0% |
| !!! | TTTATTTTTCTCATTTTCTC+AGG | + | chr1_2:52080653-52080672 | Msa0076180:intron | 20.0% |
| !! | TAAATCTAAATCCTTCTTAA+TGG | - | chr1_2:52080827-52080846 | None:intergenic | 20.0% |
| !! | AAGAAGGATTTAGATTTAAA+TGG | + | chr1_2:52080829-52080848 | Msa0076180:intron | 20.0% |
| !!! | AAGATAACATCGTATTATTT+TGG | + | chr1_2:52081341-52081360 | Msa0076180:intron | 20.0% |
| !! | TTATTTGAAAAATAGTTCAC+AGG | + | chr1_2:52081808-52081827 | Msa0076180:intron | 20.0% |
| !! | TTACTAAACTTAATAGATCA+AGG | + | chr1_2:52081972-52081991 | Msa0076180:intron | 20.0% |
| !! | AAAATCCAATTAATTGTGTT+CGG | - | chr1_2:52082064-52082083 | None:intergenic | 20.0% |
| !! | ATAACAAAAATTATCATGGA+AGG | - | chr1_2:52082679-52082698 | None:intergenic | 20.0% |
| !! | TGCTATAACAAAAATTATCA+TGG | - | chr1_2:52082683-52082702 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTTGTTATAGC+AGG | + | chr1_2:52082682-52082701 | Msa0076180:intron | 20.0% |
| !! | TATATAGTTTATACACAAGA+AGG | - | chr1_2:52082805-52082824 | None:intergenic | 20.0% |
| !!! | AAATTACTCCAATAGATTTT+TGG | + | chr1_2:52082903-52082922 | Msa0076180:intron | 20.0% |
| !! | ATAAGCAAAAAAATGTCTAT+TGG | - | chr1_2:52082981-52083000 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCATGACTGTAT+CGG | - | chr1_2:52083068-52083087 | None:intergenic | 20.0% |
| !! | GCATAAAATAATATTGTACA+TGG | - | chr1_2:52083290-52083309 | None:intergenic | 20.0% |
| !! | ATAAAATGTCATCAATGTTA+AGG | - | chr1_2:52083317-52083336 | None:intergenic | 20.0% |
| !! | TATTAGATGTTAAAAACTTC+AGG | + | chr1_2:52083718-52083737 | Msa0076180:intron | 20.0% |
| !! | ATATGCATCAATTTATTCTT+CGG | - | chr1_2:52083942-52083961 | None:intergenic | 20.0% |
| ! | GTAGTTATTGTAAGCTATAT+CGG | + | chr1_2:52075700-52075719 | Msa0076180:intron | 25.0% |
| ! | CTTATTTCAACTTACGAAAA+CGG | - | chr1_2:52075773-52075792 | None:intergenic | 25.0% |
| ! | TGAAATAAGGCAATCAAAAT+TGG | + | chr1_2:52075784-52075803 | Msa0076180:intron | 25.0% |
| ! | TTGGTACTATTTATGTGATA+TGG | + | chr1_2:52075803-52075822 | Msa0076180:intron | 25.0% |
| ! | TGGTACTATTTATGTGATAT+GGG | + | chr1_2:52075804-52075823 | Msa0076180:intron | 25.0% |
| ! | AAATCAAGGAAAGTAGAAAA+TGG | - | chr1_2:52075893-52075912 | None:intergenic | 25.0% |
| !!! | GCACTAAATTGATATTTTGA+CGG | + | chr1_2:52076205-52076224 | Msa0076180:intron | 25.0% |
| !!! | TGTGTTTTGAACTGAATTTT+TGG | + | chr1_2:52076260-52076279 | Msa0076180:intron | 25.0% |
| !!! | ATTTTTGGTGATTGTACTTT+AGG | + | chr1_2:52076275-52076294 | Msa0076180:intron | 25.0% |
| !! | AGTTCTTTTGATCCTAAAAA+TGG | - | chr1_2:52076495-52076514 | None:intergenic | 25.0% |
| ! | AACTGTCTTCTATAAATTTG+TGG | + | chr1_2:52076511-52076530 | Msa0076180:CDS | 25.0% |
| !!! | GGAATTTTTAGTACTTGTAT+TGG | + | chr1_2:52076741-52076760 | Msa0076180:intron | 25.0% |
| !! | AATAACATATAGCAGAGTTT+TGG | + | chr1_2:52076811-52076830 | Msa0076180:intron | 25.0% |
| ! | GCAGAATCATAAAAAGAAAA+TGG | - | chr1_2:52076859-52076878 | None:intergenic | 25.0% |
| ! | ACAAAACAACTGCAAAATTT+CGG | - | chr1_2:52076983-52077002 | None:intergenic | 25.0% |
| ! | ACTACATCAATACATATAGA+GGG | - | chr1_2:52077093-52077112 | None:intergenic | 25.0% |
| ! | TACTACATCAATACATATAG+AGG | - | chr1_2:52077094-52077113 | None:intergenic | 25.0% |
| !! | ATGTATTGATGTAGTAAACA+CGG | + | chr1_2:52077098-52077117 | Msa0076180:intron | 25.0% |
| ! | TTGAAAAGAAAGACAAAAGA+AGG | - | chr1_2:52077212-52077231 | None:intergenic | 25.0% |
| !! | GATTATTTCTCTTCCATATT+TGG | + | chr1_2:52077420-52077439 | Msa0076180:intron | 25.0% |
| !! | GATTTTATTACAGTTACAAG+AGG | - | chr1_2:52077736-52077755 | None:intergenic | 25.0% |
| ! | AATATGCATGAATTCTTTCT+CGG | - | chr1_2:52077912-52077931 | None:intergenic | 25.0% |
| ! | AGAATTCATGCATATTTGTT+TGG | + | chr1_2:52077916-52077935 | Msa0076180:intron | 25.0% |
| !!! | TTTTAGAAAATGACTAAAGC+TGG | - | chr1_2:52078046-52078065 | None:intergenic | 25.0% |
| !! | TTATTGGTTGTTGGTTAAAA+TGG | + | chr1_2:52078190-52078209 | Msa0076180:intron | 25.0% |
| !!! | AATGAATTTTAACTGCATCT+AGG | - | chr1_2:52078310-52078329 | None:intergenic | 25.0% |
| ! | TTGTTTGTTTATTGATCTTG+TGG | + | chr1_2:52078330-52078349 | Msa0076180:intron | 25.0% |
| ! | CTGAAAATGTGTTTATAAGT+GGG | - | chr1_2:52078471-52078490 | None:intergenic | 25.0% |
| !!! | CTAGAAAAGCATTTATAAGT+GGG | - | chr1_2:52078673-52078692 | None:intergenic | 25.0% |
| !!! | TCTAGAAAAGCATTTATAAG+TGG | - | chr1_2:52078674-52078693 | None:intergenic | 25.0% |
| ! | TTTACATGAATAAACTTCTC+AGG | + | chr1_2:52078858-52078877 | Msa0076180:intron | 25.0% |
| ! | TAATTACTGTTCTATAGTGT+AGG | + | chr1_2:52078913-52078932 | Msa0076180:intron | 25.0% |
| !!! | TTTTTTCATTTGTATTGGTG+GGG | + | chr1_2:52079270-52079289 | Msa0076180:intron | 25.0% |
| !! | CAGAAAATTTTCTTTGCAAA+TGG | + | chr1_2:52079513-52079532 | Msa0076180:intron | 25.0% |
| ! | GTGTTAGTAAATACATTTGA+AGG | + | chr1_2:52079610-52079629 | Msa0076180:intron | 25.0% |
| ! | TAATAGTCACTAATTCTAAC+AGG | + | chr1_2:52079693-52079712 | Msa0076180:intron | 25.0% |
| !!! | CAAGTTAGTTGTTTTTGTAA+TGG | + | chr1_2:52079858-52079877 | Msa0076180:intron | 25.0% |
| !! | ATATTGAAAAAGCATGTCAT+CGG | - | chr1_2:52079885-52079904 | None:intergenic | 25.0% |
| !!! | ATGACATGCTTTTTCAATAT+AGG | + | chr1_2:52079885-52079904 | Msa0076180:intron | 25.0% |
| ! | CAGACATTTGTAAATTGTAT+GGG | - | chr1_2:52080448-52080467 | None:intergenic | 25.0% |
| ! | TCAGACATTTGTAAATTGTA+TGG | - | chr1_2:52080449-52080468 | None:intergenic | 25.0% |
| ! | ACAAAGTTATTGTTGATACA+AGG | + | chr1_2:52080571-52080590 | Msa0076180:intron | 25.0% |
| ! | AGCAGGAAAGATATTATTAT+TGG | - | chr1_2:52080700-52080719 | None:intergenic | 25.0% |
| ! | TAGGATAGTCTAATTATTAG+AGG | + | chr1_2:52080769-52080788 | Msa0076180:intron | 25.0% |
| ! | TTGTCATTAGACAAGATATA+TGG | + | chr1_2:52080853-52080872 | Msa0076180:intron | 25.0% |
| ! | AAATATCAAAGAAATAGCCA+CGG | - | chr1_2:52081102-52081121 | None:intergenic | 25.0% |
| ! | ATCTATTCCTGCAATTAAAA+AGG | - | chr1_2:52081370-52081389 | None:intergenic | 25.0% |
| ! | TATTAGAAAACTTCTTTCCT+AGG | - | chr1_2:52081729-52081748 | None:intergenic | 25.0% |
| ! | TTAACTGTCTTATCATACAA+TGG | - | chr1_2:52081769-52081788 | None:intergenic | 25.0% |
| ! | TTTCATCAGAATTTGAAAAC+TGG | - | chr1_2:52081923-52081942 | None:intergenic | 25.0% |
| ! | TGACAATTTGTACTAACAAA+AGG | + | chr1_2:52081943-52081962 | Msa0076180:intron | 25.0% |
| ! | GACAATTTGTACTAACAAAA+GGG | + | chr1_2:52081944-52081963 | Msa0076180:intron | 25.0% |
| !! | AAAGAATGAAGGTATAACAA+CGG | - | chr1_2:52082559-52082578 | None:intergenic | 25.0% |
| ! | TTATCATGGAAGGAAAATAA+GGG | - | chr1_2:52082669-52082688 | None:intergenic | 25.0% |
| ! | ATTATCATGGAAGGAAAATA+AGG | - | chr1_2:52082670-52082689 | None:intergenic | 25.0% |
| ! | TATCAAAAAGACATCACAAA+TGG | - | chr1_2:52082768-52082787 | None:intergenic | 25.0% |
| ! | CTATTAGATTGTTGCAATAA+GGG | + | chr1_2:52082868-52082887 | Msa0076180:intron | 25.0% |
| ! | TATTAGATTGTTGCAATAAG+GGG | + | chr1_2:52082869-52082888 | Msa0076180:intron | 25.0% |
| !! | TTTTGCTTATAATTGTGAAC+CGG | + | chr1_2:52082991-52083010 | Msa0076180:intron | 25.0% |
| !!! | TTATTTTTCATGACTGTATC+GGG | - | chr1_2:52083067-52083086 | None:intergenic | 25.0% |
| ! | AATAAATGTTCATCAGAAAG+AGG | + | chr1_2:52083082-52083101 | Msa0076180:intron | 25.0% |
| ! | AGAACATGAAACACATATTA+AGG | - | chr1_2:52083166-52083185 | None:intergenic | 25.0% |
| ! | AGAACATGAAACACATATTA+AGG | - | chr1_2:52083166-52083185 | None:intergenic | 25.0% |
| !!! | ACTTTAACTTTTCTAGCATT+TGG | + | chr1_2:52083251-52083270 | Msa0076180:intron | 25.0% |
| ! | TCCTAAATATACTTTGATGA+TGG | + | chr1_2:52083486-52083505 | Msa0076180:intron | 25.0% |
| ! | TATTAAAGAGAATAAGCAGT+TGG | + | chr1_2:52083614-52083633 | Msa0076180:intron | 25.0% |
| ! | ATTAAAGAGAATAAGCAGTT+GGG | + | chr1_2:52083615-52083634 | Msa0076180:intron | 25.0% |
| !! | TTACGTTTTCTTTTCATGTA+TGG | + | chr1_2:52083797-52083816 | Msa0076180:intron | 25.0% |
| ! | TCAGGCATTTAAAAATGTAT+TGG | + | chr1_2:52083821-52083840 | Msa0076180:intron | 25.0% |
| ! | AAATGTATTGGACAAATTTG+TGG | + | chr1_2:52083833-52083852 | Msa0076180:CDS | 25.0% |
| ! | AATGTATTGGACAAATTTGT+GGG | + | chr1_2:52083834-52083853 | Msa0076180:CDS | 25.0% |
| ! | AGTGAACTTTATGAATGAAT+TGG | + | chr1_2:52083901-52083920 | Msa0076180:three_prime_UTR | 25.0% |
| ! | TTCAGTGTATCAAATACATA+GGG | - | chr1_2:52084097-52084116 | None:intergenic | 25.0% |
| ! | ATTCAGTGTATCAAATACAT+AGG | - | chr1_2:52084098-52084117 | None:intergenic | 25.0% |
| ! | TCAGGAAAATATTAAATGGT+GGG | - | chr1_2:52084163-52084182 | None:intergenic | 25.0% |
| ! | TTCAGGAAAATATTAAATGG+TGG | - | chr1_2:52084164-52084183 | None:intergenic | 25.0% |
| ! | TAGTTTAGCTAGTTCAAATT+GGG | - | chr1_2:52084198-52084217 | None:intergenic | 25.0% |
| ! | TAGTTTAGCTAGTTCAAATT+GGG | - | chr1_2:52084198-52084217 | None:intergenic | 25.0% |
| ! | GTACAAGACATAATTATACA+TGG | - | chr1_2:52084273-52084292 | None:intergenic | 25.0% |
| !! | CTTGTACATTATTGATTAGT+TGG | + | chr1_2:52084286-52084305 | Msa0076180:three_prime_UTR | 25.0% |
| ! | GAAGAACAATTTTCCAATGT+TGG | + | chr1_2:52074867-52074886 | Msa0076180:CDS | 30.0% |
| ATTTCAGATTTCACAAGAGA+GGG | - | chr1_2:52074927-52074946 | None:intergenic | 30.0% | |
| AATTTCAGATTTCACAAGAG+AGG | - | chr1_2:52074928-52074947 | None:intergenic | 30.0% | |
| ! | TTTGATCGTTTGAAGTTTGA+AGG | - | chr1_2:52074962-52074981 | None:intergenic | 30.0% |
| AACTTCAAACGATCAAAGTA+TGG | + | chr1_2:52074965-52074984 | Msa0076180:CDS | 30.0% | |
| ! | TGTTGTTTGATTGATTACAG+CGG | - | chr1_2:52075072-52075091 | None:intergenic | 30.0% |
| TAACCTAAAAAGGTTCTATG+CGG | + | chr1_2:52075164-52075183 | Msa0076180:intron | 30.0% | |
| ! | CGCTTTTCATATAAGTGTTT+CGG | + | chr1_2:52075401-52075420 | Msa0076180:intron | 30.0% |
| AAGCATGTTTGACAATGTTT+GGG | - | chr1_2:52075575-52075594 | None:intergenic | 30.0% | |
| TAAGCATGTTTGACAATGTT+TGG | - | chr1_2:52075576-52075595 | None:intergenic | 30.0% | |
| TTATTGTAAGCTATATCGGA+GGG | + | chr1_2:52075704-52075723 | Msa0076180:intron | 30.0% | |
| !! | CGTTTTCGTAAGTTGAAATA+AGG | + | chr1_2:52075771-52075790 | Msa0076180:intron | 30.0% |
| TTATGTGATATGGGATTATG+TGG | + | chr1_2:52075813-52075832 | Msa0076180:intron | 30.0% | |
| !! | TCCTTGATTTGTGTAAGAAA+CGG | + | chr1_2:52075903-52075922 | Msa0076180:CDS | 30.0% |
| ! | TGCGCTAAATAAATTTGTTC+GGG | - | chr1_2:52076034-52076053 | None:intergenic | 30.0% |
| ! | CTGCGCTAAATAAATTTGTT+CGG | - | chr1_2:52076035-52076054 | None:intergenic | 30.0% |
| ! | TGAGATAGGTTATTTCACAT+TGG | - | chr1_2:52076069-52076088 | None:intergenic | 30.0% |
| GTGAAATAACCTATCTCAAT+TGG | + | chr1_2:52076071-52076090 | Msa0076180:intron | 30.0% | |
| TTTGATGAACCAATTGAGAT+AGG | - | chr1_2:52076083-52076102 | None:intergenic | 30.0% | |
| CAAAATATCAATTTAGTGCG+TGG | - | chr1_2:52076204-52076223 | None:intergenic | 30.0% | |
| TTACGATTACTGTTCATGAT+CGG | - | chr1_2:52076303-52076322 | None:intergenic | 30.0% | |
| !!! | CTACTTTGTTTTGTAGTCTA+TGG | + | chr1_2:52076385-52076404 | Msa0076180:intron | 30.0% |
| ! | TCTTTTGATCCTAAAAATGG+AGG | - | chr1_2:52076492-52076511 | None:intergenic | 30.0% |
| AAACTATGCACAAAAGATTG+TGG | - | chr1_2:52076581-52076600 | None:intergenic | 30.0% | |
| ! | AATCTTTTGTGCATAGTTTC+TGG | + | chr1_2:52076582-52076601 | Msa0076180:CDS | 30.0% |
| ! | CATATAACTTACCTTGTTTG+AGG | - | chr1_2:52076608-52076627 | None:intergenic | 30.0% |
| TAATAGGTCATAACAAGAAG+AGG | - | chr1_2:52076635-52076654 | None:intergenic | 30.0% | |
| TAATATGCTATCAACTGTGT+AGG | + | chr1_2:52076720-52076739 | Msa0076180:intron | 30.0% | |
| !! | TAAATGACAGAAATGGATTG+AGG | - | chr1_2:52076954-52076973 | None:intergenic | 30.0% |
| !! | GAAATTTTGCAGTTGTTTTG+TGG | + | chr1_2:52076982-52077001 | Msa0076180:intron | 30.0% |
| TTGGATAAATTGAGTAATCG+GGG | - | chr1_2:52077270-52077289 | None:intergenic | 30.0% | |
| CTTGGATAAATTGAGTAATC+GGG | - | chr1_2:52077271-52077290 | None:intergenic | 30.0% | |
| CCTTGGATAAATTGAGTAAT+CGG | - | chr1_2:52077272-52077291 | None:intergenic | 30.0% | |
| CGATTACTCAATTTATCCAA+GGG | + | chr1_2:52077270-52077289 | Msa0076180:CDS | 30.0% | |
| ! | TAACTTCTCTGATTGTTTTC+TGG | + | chr1_2:52077485-52077504 | Msa0076180:intron | 30.0% |
| ! | AACTTCTCTGATTGTTTTCT+GGG | + | chr1_2:52077486-52077505 | Msa0076180:intron | 30.0% |
| !! | TTCTGTACTGGTTAAATATC+TGG | + | chr1_2:52077511-52077530 | Msa0076180:intron | 30.0% |
| TCAATGTTCACACTTATTGA+AGG | + | chr1_2:52077539-52077558 | Msa0076180:intron | 30.0% | |
| ACAGCTCATAATTAGATAAC+TGG | + | chr1_2:52077563-52077582 | Msa0076180:intron | 30.0% | |
| CAAGAATTGTTAGCAATTGT+AGG | - | chr1_2:52078101-52078120 | None:intergenic | 30.0% | |
| ATGACATAATGCGAAGATAT+AGG | - | chr1_2:52078135-52078154 | None:intergenic | 30.0% | |
| ! | TCATGGTCCTTTTCATTTAT+TGG | + | chr1_2:52078174-52078193 | Msa0076180:intron | 30.0% |
| CCAACAACCAATAAATGAAA+AGG | - | chr1_2:52078184-52078203 | None:intergenic | 30.0% | |
| !! | CCTTTTCATTTATTGGTTGT+TGG | + | chr1_2:52078181-52078200 | Msa0076180:intron | 30.0% |
| AAGAAAGATCTATACTCTCA+TGG | - | chr1_2:52078263-52078282 | None:intergenic | 30.0% | |
| AGAGTATAGATCTTTCTTGA+AGG | + | chr1_2:52078265-52078284 | Msa0076180:intron | 30.0% | |
| AAATGTATATGCTCAAGCAA+CGG | - | chr1_2:52078369-52078388 | None:intergenic | 30.0% | |
| TCTTCTCTTTGAATTTGAGT+TGG | + | chr1_2:52078399-52078418 | Msa0076180:intron | 30.0% | |
| ! | CTTCTCTTTGAATTTGAGTT+GGG | + | chr1_2:52078400-52078419 | Msa0076180:intron | 30.0% |
| AAAATGTGTTTATAAGTGGG+AGG | - | chr1_2:52078468-52078487 | None:intergenic | 30.0% | |
| CCTGAAAATGTGTTTATAAG+TGG | - | chr1_2:52078472-52078491 | None:intergenic | 30.0% | |
| ! | CCACTTATAAACACATTTTC+AGG | + | chr1_2:52078469-52078488 | Msa0076180:intron | 30.0% |
| GAGTTTATCCAAGATTCATT+GGG | - | chr1_2:52078586-52078605 | None:intergenic | 30.0% | |
| TCCTATACCATCTTAGAATT+TGG | + | chr1_2:52078604-52078623 | Msa0076180:intron | 30.0% | |
| CCTATACCATCTTAGAATTT+GGG | + | chr1_2:52078605-52078624 | Msa0076180:intron | 30.0% | |
| TAACTCAACCCTACAAAATA+GGG | + | chr1_2:52078635-52078654 | Msa0076180:intron | 30.0% | |
| ! | ATCTTTCACCCTATTTTGTA+GGG | - | chr1_2:52078646-52078665 | None:intergenic | 30.0% |
| ATAGATCCTACTGCAAAATA+CGG | - | chr1_2:52078769-52078788 | None:intergenic | 30.0% | |
| TGTAATGAATATGCGAACTA+GGG | - | chr1_2:52078823-52078842 | None:intergenic | 30.0% | |
| TTGTAATGAATATGCGAACT+AGG | - | chr1_2:52078824-52078843 | None:intergenic | 30.0% | |
| TAAAATCGTCACTATCTACT+TGG | - | chr1_2:52078944-52078963 | None:intergenic | 30.0% | |
| !! | CTATTGCTATTAACTTTTGG+TGG | + | chr1_2:52078964-52078983 | Msa0076180:intron | 30.0% |
| ATTTACGCAGAATATTGAGA+CGG | + | chr1_2:52079033-52079052 | Msa0076180:intron | 30.0% | |
| CTAACACCATTACAAATACA+AGG | - | chr1_2:52079597-52079616 | None:intergenic | 30.0% | |
| TTTAAGAATCCGTACAATCA+AGG | + | chr1_2:52079652-52079671 | Msa0076180:intron | 30.0% | |
| GTTAGTATTCCTTGATTGTA+CGG | - | chr1_2:52079664-52079683 | None:intergenic | 30.0% | |
| TTAACTCGATGAACTTTGAT+AGG | - | chr1_2:52079812-52079831 | None:intergenic | 30.0% | |
| !!! | ATGCTTTTTCAATATAGGAC+AGG | + | chr1_2:52079890-52079909 | Msa0076180:intron | 30.0% |
| AAAATTGATTAGACCGTCAA+TGG | - | chr1_2:52080077-52080096 | None:intergenic | 30.0% | |
| ! | GTTGAAAGGAATGGATTTAA+AGG | + | chr1_2:52080142-52080161 | Msa0076180:CDS | 30.0% |
| AAAGGAGAAAAGACTTAAAG+AGG | + | chr1_2:52080160-52080179 | Msa0076180:CDS | 30.0% | |
| AAGGAGAAAAGACTTAAAGA+GGG | + | chr1_2:52080161-52080180 | Msa0076180:CDS | 30.0% | |
| ! | TTTGACATTCCAGAGAATTT+TGG | - | chr1_2:52080375-52080394 | None:intergenic | 30.0% |
| !! | AAGACATTTTGAAGAGTTTG+TGG | - | chr1_2:52080398-52080417 | None:intergenic | 30.0% |
| TCAAAATGTCTTTCTTGCTA+TGG | + | chr1_2:52080406-52080425 | Msa0076180:CDS | 30.0% | |
| TTTGTACTTGATCATATCGA+TGG | + | chr1_2:52080596-52080615 | Msa0076180:intron | 30.0% | |
| AATGTATTTGTCAACTTGCA+AGG | - | chr1_2:52080629-52080648 | None:intergenic | 30.0% | |
| TAATATCTTTCCTGCTTGAA+AGG | + | chr1_2:52080704-52080723 | Msa0076180:intron | 30.0% | |
| AATATCTTTCCTGCTTGAAA+GGG | + | chr1_2:52080705-52080724 | Msa0076180:intron | 30.0% | |
| AAAGTGAGTAGATCATATGT+AGG | + | chr1_2:52080750-52080769 | Msa0076180:intron | 30.0% | |
| AGTCTAATTATTAGAGGTAG+AGG | + | chr1_2:52080775-52080794 | Msa0076180:intron | 30.0% | |
| GTCTAATTATTAGAGGTAGA+GGG | + | chr1_2:52080776-52080795 | Msa0076180:intron | 30.0% | |
| CATTAGACAAGATATATGGT+AGG | + | chr1_2:52080857-52080876 | Msa0076180:intron | 30.0% | |
| !! | AAGGTGTTATTGTCGTTAAA+AGG | + | chr1_2:52080934-52080953 | Msa0076180:intron | 30.0% |
| !! | AGGTGTTATTGTCGTTAAAA+GGG | + | chr1_2:52080935-52080954 | Msa0076180:intron | 30.0% |
| ! | TCACTTCTAAAGAATAAAGG+AGG | - | chr1_2:52080979-52080998 | None:intergenic | 30.0% |
| ! | GCATCACTTCTAAAGAATAA+AGG | - | chr1_2:52080982-52081001 | None:intergenic | 30.0% |
| ! | TATTCTTTAGAAGTGATGCT+TGG | + | chr1_2:52080983-52081002 | Msa0076180:intron | 30.0% |
| ! | ATTCTTTAGAAGTGATGCTT+GGG | + | chr1_2:52080984-52081003 | Msa0076180:intron | 30.0% |
| AACTAACTATTGAGGAAGAT+CGG | + | chr1_2:52081265-52081284 | Msa0076180:CDS | 30.0% | |
| AGCAATGAATTCTATTCTGA+AGG | + | chr1_2:52081430-52081449 | Msa0076180:CDS | 30.0% | |
| GCAATGAATTCTATTCTGAA+GGG | + | chr1_2:52081431-52081450 | Msa0076180:CDS | 30.0% | |
| ! | CAATGAATTCTATTCTGAAG+GGG | + | chr1_2:52081432-52081451 | Msa0076180:CDS | 30.0% |
| !!! | TGTGCTATAGCTTTATCTTT+TGG | + | chr1_2:52081489-52081508 | Msa0076180:intron | 30.0% |
| ! | TTAATAGGTTGGAGATTCAA+GGG | - | chr1_2:52081587-52081606 | None:intergenic | 30.0% |
| !!! | AAAGTTTTGGGTTAATAGGT+TGG | - | chr1_2:52081598-52081617 | None:intergenic | 30.0% |
| !!! | CAGAAAAGTTTTGGGTTAAT+AGG | - | chr1_2:52081602-52081621 | None:intergenic | 30.0% |
| !! | TCTGCATAAGTTCTAAAACA+AGG | + | chr1_2:52081854-52081873 | Msa0076180:intron | 30.0% |
| AATGCACACGGAATTTATAT+CGG | + | chr1_2:52082003-52082022 | Msa0076180:intron | 30.0% | |
| AAACTCCGAACACAATTAAT+TGG | + | chr1_2:52082056-52082075 | Msa0076180:intron | 30.0% | |
| TTTATTACATGTTAGCTGAG+AGG | - | chr1_2:52082223-52082242 | None:intergenic | 30.0% | |
| AAGCTGAATCAATGTTGAAA+TGG | + | chr1_2:52082263-52082282 | Msa0076180:intron | 30.0% | |
| !! | TGTCTTGAATTTGCTATCAA+TGG | + | chr1_2:52082297-52082316 | Msa0076180:intron | 30.0% |
| ACTAGAAAATAGAGTGACTA+TGG | + | chr1_2:52082333-52082352 | Msa0076180:intron | 30.0% | |
| GGAAAAGAATTGGATAGTAA+CGG | - | chr1_2:52082427-52082446 | None:intergenic | 30.0% | |
| TATCATGGAAGGAAAATAAG+GGG | - | chr1_2:52082668-52082687 | None:intergenic | 30.0% | |
| AAAAGACATCACAAATGGTA+TGG | - | chr1_2:52082763-52082782 | None:intergenic | 30.0% | |
| GCTATTAGATTGTTGCAATA+AGG | + | chr1_2:52082867-52082886 | Msa0076180:intron | 30.0% | |
| ATTAGATTGTTGCAATAAGG+GGG | + | chr1_2:52082870-52082889 | Msa0076180:intron | 30.0% | |
| ! | TATTTTTCATGACTGTATCG+GGG | - | chr1_2:52083066-52083085 | None:intergenic | 30.0% |
| CCAAATAGTTATAGCATAGA+TGG | - | chr1_2:52083123-52083142 | None:intergenic | 30.0% | |
| CCATCTATGCTATAACTATT+TGG | + | chr1_2:52083120-52083139 | Msa0076180:intron | 30.0% | |
| GCCATCATCAAAGTATATTT+AGG | - | chr1_2:52083490-52083509 | None:intergenic | 30.0% | |
| ! | GTTCACACTTTAGAAGTATA+TGG | + | chr1_2:52083745-52083764 | Msa0076180:intron | 30.0% |
| ! | TTTCTTTTCATGTATGGTTC+AGG | + | chr1_2:52083803-52083822 | Msa0076180:intron | 30.0% |
| AACAGTTGTTAGTGTTGTAT+AGG | + | chr1_2:52084046-52084065 | Msa0076180:three_prime_UTR | 30.0% | |
| TCAGTGTATCAAATACATAG+GGG | - | chr1_2:52084096-52084115 | None:intergenic | 30.0% | |
| CAGGAAAATATTAAATGGTG+GGG | - | chr1_2:52084162-52084181 | None:intergenic | 30.0% | |
| CTAGTTTAGCTAGTTCAAAT+TGG | - | chr1_2:52084199-52084218 | None:intergenic | 30.0% | |
| CTAGTTTAGCTAGTTCAAAT+TGG | - | chr1_2:52084199-52084218 | None:intergenic | 30.0% | |
| TTTCAGATTTCACAAGAGAG+GGG | - | chr1_2:52074926-52074945 | None:intergenic | 35.0% | |
| GTTGTTTGATTGATTACAGC+GGG | - | chr1_2:52075071-52075090 | None:intergenic | 35.0% | |
| CTTTCTCTTTATGGAATCCA+CGG | + | chr1_2:52075207-52075226 | Msa0076180:CDS | 35.0% | |
| AGTTGTTTATCCAAACAGAC+AGG | - | chr1_2:52075427-52075446 | None:intergenic | 35.0% | |
| GTTATTGTAAGCTATATCGG+AGG | + | chr1_2:52075703-52075722 | Msa0076180:intron | 35.0% | |
| AGGAAAGTAGAAAATGGTAG+AGG | - | chr1_2:52075887-52075906 | None:intergenic | 35.0% | |
| TCCGTTTCTTACACAAATCA+AGG | - | chr1_2:52075907-52075926 | None:intergenic | 35.0% | |
| CGAACAAATTTATTTAGCGC+AGG | + | chr1_2:52076033-52076052 | Msa0076180:CDS | 35.0% | |
| ATATCAATTTAGTGCGTGGA+TGG | - | chr1_2:52076200-52076219 | None:intergenic | 35.0% | |
| GATCATGAACAGTAATCGTA+AGG | + | chr1_2:52076302-52076321 | Msa0076180:CDS | 35.0% | |
| TCGTAAGGAGAAAGTTCAAT+TGG | + | chr1_2:52076317-52076336 | Msa0076180:CDS | 35.0% | |
| CGTAAGGAGAAAGTTCAATT+GGG | + | chr1_2:52076318-52076337 | Msa0076180:CDS | 35.0% | |
| TTCTGCAAAAAATCCTTTCC+AGG | + | chr1_2:52076873-52076892 | Msa0076180:intron | 35.0% | |
| TCTGCAAAAAATCCTTTCCA+GGG | + | chr1_2:52076874-52076893 | Msa0076180:intron | 35.0% | |
| GAATAAGTAACTGAAAACCC+TGG | - | chr1_2:52076894-52076913 | None:intergenic | 35.0% | |
| CATGTTCAGTTCTCAAAACA+TGG | + | chr1_2:52077154-52077173 | Msa0076180:intron | 35.0% | |
| CCGATTACTCAATTTATCCA+AGG | + | chr1_2:52077269-52077288 | Msa0076180:CDS | 35.0% | |
| CTTAATGGAGTTTGGACAAA+AGG | + | chr1_2:52077300-52077319 | Msa0076180:CDS | 35.0% | |
| ! | TGATAAGCCTTTCTGTTTCT+GGG | + | chr1_2:52077395-52077414 | Msa0076180:intron | 35.0% |
| TAATCTACCCAGAAACAGAA+AGG | - | chr1_2:52077405-52077424 | None:intergenic | 35.0% | |
| !!! | TTGTTTGGTGCTTTTGATGA+AGG | + | chr1_2:52077931-52077950 | Msa0076180:intron | 35.0% |
| AAGGTGATTGATATGTGCAT+TGG | + | chr1_2:52077950-52077969 | Msa0076180:intron | 35.0% | |
| AATAAATGCTTACAAGCCTG+AGG | + | chr1_2:52078066-52078085 | Msa0076180:intron | 35.0% | |
| ATAAATGCTTACAAGCCTGA+GGG | + | chr1_2:52078067-52078086 | Msa0076180:intron | 35.0% | |
| TCTAACTCAACCTTACGAAA+CGG | + | chr1_2:52078423-52078442 | Msa0076180:intron | 35.0% | |
| GGAGTTTATCCAAGATTCAT+TGG | - | chr1_2:52078587-52078606 | None:intergenic | 35.0% | |
| !! | CCCAAATTCTAAGATGGTAT+AGG | - | chr1_2:52078608-52078627 | None:intergenic | 35.0% |
| ! | GTTCAACCCAAATTCTAAGA+TGG | - | chr1_2:52078614-52078633 | None:intergenic | 35.0% |
| ! | CTATTTTGTAGGGTTGAGTT+AGG | - | chr1_2:52078636-52078655 | None:intergenic | 35.0% |
| CTAACTCAACCCTACAAAAT+AGG | + | chr1_2:52078634-52078653 | Msa0076180:intron | 35.0% | |
| ! | CATCTTTCACCCTATTTTGT+AGG | - | chr1_2:52078647-52078666 | None:intergenic | 35.0% |
| ! | AAGGTTGATTGACAAAGAGA+TGG | + | chr1_2:52079186-52079205 | Msa0076180:intron | 35.0% |
| ATTACAAATACAAGGTGGTG+TGG | - | chr1_2:52079589-52079608 | None:intergenic | 35.0% | |
| ACACCACCTTGTATTTGTAA+TGG | + | chr1_2:52079588-52079607 | Msa0076180:intron | 35.0% | |
| ACACCATTACAAATACAAGG+TGG | - | chr1_2:52079594-52079613 | None:intergenic | 35.0% | |
| ! | ACAACTAACTTGAGAGCATA+AGG | - | chr1_2:52079850-52079869 | None:intergenic | 35.0% |
| GCTTATCATTTCTCCATTGA+CGG | + | chr1_2:52080061-52080080 | Msa0076180:intron | 35.0% | |
| AATTGCAGTCAGATGTTGAA+AGG | + | chr1_2:52080128-52080147 | Msa0076180:CDS | 35.0% | |
| AGGAGAAAAGACTTAAAGAG+GGG | + | chr1_2:52080162-52080181 | Msa0076180:CDS | 35.0% | |
| ATGATCTACTCACTTTACGT+AGG | - | chr1_2:52080746-52080765 | None:intergenic | 35.0% | |
| ! | GTTGAGCCAACAATTTTCAT+TGG | - | chr1_2:52080805-52080824 | None:intergenic | 35.0% |
| AGATATATGGTAGGACATTG+TGG | + | chr1_2:52080866-52080885 | Msa0076180:intron | 35.0% | |
| ! | TATGACTGATTCCAACTAGT+GGG | + | chr1_2:52080909-52080928 | Msa0076180:intron | 35.0% |
| TACACGGAAATTTGATGAGA+TGG | + | chr1_2:52081239-52081258 | Msa0076180:CDS | 35.0% | |
| GATGGATGAACTAACTATTG+AGG | + | chr1_2:52081257-52081276 | Msa0076180:CDS | 35.0% | |
| TCGTAAGTGTTTCATGTGAT+TGG | + | chr1_2:52081310-52081329 | Msa0076180:intron | 35.0% | |
| ATTCACACAACAGGTAATTG+AGG | + | chr1_2:52081463-52081482 | Msa0076180:intron | 35.0% | |
| TGTACTTAGAGTCACATGAA+GGG | + | chr1_2:52081548-52081567 | Msa0076180:intron | 35.0% | |
| ! | GTTAATAGGTTGGAGATTCA+AGG | - | chr1_2:52081588-52081607 | None:intergenic | 35.0% |
| ! | GTGAGAGTCAGAAAAGTTTT+GGG | - | chr1_2:52081610-52081629 | None:intergenic | 35.0% |
| ! | AGTGAGAGTCAGAAAAGTTT+TGG | - | chr1_2:52081611-52081630 | None:intergenic | 35.0% |
| !! | AAGCAACATGAATTTGCTGA+TGG | + | chr1_2:52081693-52081712 | Msa0076180:intron | 35.0% |
| TACAATGGAAAACAGTTCGA+GGG | - | chr1_2:52081754-52081773 | None:intergenic | 35.0% | |
| ATACAATGGAAAACAGTTCG+AGG | - | chr1_2:52081755-52081774 | None:intergenic | 35.0% | |
| ATGCACACGGAATTTATATC+GGG | + | chr1_2:52082004-52082023 | Msa0076180:intron | 35.0% | |
| CCAATACAAAGAATGCTTCA+GGG | - | chr1_2:52082128-52082147 | None:intergenic | 35.0% | |
| TCCAATACAAAGAATGCTTC+AGG | - | chr1_2:52082129-52082148 | None:intergenic | 35.0% | |
| ! | GAAGCATTCTTTGTATTGGA+CGG | + | chr1_2:52082129-52082148 | Msa0076180:intron | 35.0% |
| !! | GAACATTGTAAGGTATTGCA+CGG | - | chr1_2:52082160-52082179 | None:intergenic | 35.0% |
| CAATGTTGAAATGGAGATGA+TGG | + | chr1_2:52082272-52082291 | Msa0076180:intron | 35.0% | |
| !! | AGTCACTCTATTTTCTAGTG+AGG | - | chr1_2:52082332-52082351 | None:intergenic | 35.0% |
| !! | TGAAGGTTGTTTTCTCCATA+GGG | - | chr1_2:52082388-52082407 | None:intergenic | 35.0% |
| CAAGGATATGCAAAGAATGA+AGG | - | chr1_2:52082570-52082589 | None:intergenic | 35.0% | |
| CATTCTTTGCATATCCTTGT+AGG | + | chr1_2:52082571-52082590 | Msa0076180:intron | 35.0% | |
| ATCATGGAAGGAAAATAAGG+GGG | - | chr1_2:52082667-52082686 | None:intergenic | 35.0% | |
| ATCAAAATTTCCACTTGCCT+TGG | + | chr1_2:52082728-52082747 | Msa0076180:intron | 35.0% | |
| AGAATAAGCAGTTGGGTTAT+TGG | + | chr1_2:52083622-52083641 | Msa0076180:intron | 35.0% | |
| GAATAAGCAGTTGGGTTATT+GGG | + | chr1_2:52083623-52083642 | Msa0076180:intron | 35.0% | |
| TGCATCAATTTATTCTTCGG+AGG | - | chr1_2:52083939-52083958 | None:intergenic | 35.0% | |
| ! | AAACCAAAGCATTTCTTCGT+TGG | + | chr1_2:52083965-52083984 | Msa0076180:three_prime_UTR | 35.0% |
| TATCAAATACATAGGGGCTA+GGG | - | chr1_2:52084090-52084109 | None:intergenic | 35.0% | |
| ! | ATTGGGAGCTTCTTTATTTC+AGG | - | chr1_2:52084181-52084200 | None:intergenic | 35.0% |
| CGATGTATCATGACGATTAG+TGG | - | chr1_2:52074789-52074808 | None:intergenic | 40.0% | |
| GACTGAGAGTTAATTGTCGT+GGG | + | chr1_2:52074814-52074833 | Msa0076180:CDS | 40.0% | |
| ACTGAGAGTTAATTGTCGTG+GGG | + | chr1_2:52074815-52074834 | Msa0076180:CDS | 40.0% | |
| TGGGAAGTTCTTCGTATCTT+CGG | - | chr1_2:52075007-52075026 | None:intergenic | 40.0% | |
| ! | CAACCGCATAGAACCTTTTT+AGG | - | chr1_2:52075170-52075189 | None:intergenic | 40.0% |
| ! | AGAGAAAGCTCTCCAAGTTT+TGG | - | chr1_2:52075195-52075214 | None:intergenic | 40.0% |
| CTTGGAGAGCTTTCTCTTTA+TGG | + | chr1_2:52075198-52075217 | Msa0076180:CDS | 40.0% | |
| TAATCTAAACCATCGTTCCG+TGG | - | chr1_2:52075227-52075246 | None:intergenic | 40.0% | |
| CGATGGTTTAGATTACTTGC+AGG | + | chr1_2:52075232-52075251 | Msa0076180:CDS | 40.0% | |
| GTTTAGATTACTTGCAGGCA+CGG | + | chr1_2:52075237-52075256 | Msa0076180:CDS | 40.0% | |
| TTTAGATTACTTGCAGGCAC+GGG | + | chr1_2:52075238-52075257 | Msa0076180:CDS | 40.0% | |
| CCAAGATCACCATAAAAGAC+AGG | - | chr1_2:52075305-52075324 | None:intergenic | 40.0% | |
| ! | CCTGTCTTTTATGGTGATCT+TGG | + | chr1_2:52075302-52075321 | Msa0076180:intron | 40.0% |
| TGATCTTGGAAGTCATCACA+GGG | + | chr1_2:52075316-52075335 | Msa0076180:intron | 40.0% | |
| AAGCTATATCGGAGGGTTTA+TGG | + | chr1_2:52075711-52075730 | Msa0076180:intron | 40.0% | |
| TGTTCATTTCCTTGCATTGC+AGG | + | chr1_2:52075859-52075878 | Msa0076180:intron | 40.0% | |
| AACTCAGCAACAACAACATC+TGG | + | chr1_2:52075937-52075956 | Msa0076180:CDS | 40.0% | |
| !! | TCATTGTGTTGCTTCGCAAA+CGG | + | chr1_2:52075970-52075989 | Msa0076180:CDS | 40.0% |
| AAGTTCAATTGGGAACCCTA+AGG | + | chr1_2:52076328-52076347 | Msa0076180:CDS | 40.0% | |
| AGTTCAATTGGGAACCCTAA+GGG | + | chr1_2:52076329-52076348 | Msa0076180:CDS | 40.0% | |
| !! | TCTCTTCAGCCTCCATTTTT+AGG | + | chr1_2:52076480-52076499 | Msa0076180:intron | 40.0% |
| ATGCACAAAAGATTGTGGTG+TGG | - | chr1_2:52076576-52076595 | None:intergenic | 40.0% | |
| !! | ATAGTTTCTGGCCTCAAACA+AGG | + | chr1_2:52076594-52076613 | Msa0076180:CDS | 40.0% |
| GAGGTAGTAGGTAGGATAAT+AGG | - | chr1_2:52076651-52076670 | None:intergenic | 40.0% | |
| !!! | GCAGAGTTTTGGAACTCTAT+TGG | + | chr1_2:52076822-52076841 | Msa0076180:intron | 40.0% |
| AGTAACTGAAAACCCTGGAA+AGG | - | chr1_2:52076889-52076908 | None:intergenic | 40.0% | |
| TGAGGAAGGAAAAGAAGGTA+GGG | - | chr1_2:52076929-52076948 | None:intergenic | 40.0% | |
| TTGAGGAAGGAAAAGAAGGT+AGG | - | chr1_2:52076930-52076949 | None:intergenic | 40.0% | |
| TCTACCCAATGCCTATCTAT+GGG | + | chr1_2:52077027-52077046 | Msa0076180:CDS | 40.0% | |
| CCATTGAGTATACCTGTGAT+TGG | - | chr1_2:52077060-52077079 | None:intergenic | 40.0% | |
| CCAATCACAGGTATACTCAA+TGG | + | chr1_2:52077057-52077076 | Msa0076180:intron | 40.0% | |
| GCAGAAGACTTAATGGAGTT+TGG | + | chr1_2:52077292-52077311 | Msa0076180:CDS | 40.0% | |
| GTTTGGACAAAAGGTTGTTC+TGG | + | chr1_2:52077309-52077328 | Msa0076180:CDS | 40.0% | |
| ! | GATGCACTTTTCATTCCTGA+AGG | + | chr1_2:52077340-52077359 | Msa0076180:CDS | 40.0% |
| ! | CACTTTTCATTCCTGAAGGA+TGG | + | chr1_2:52077344-52077363 | Msa0076180:CDS | 40.0% |
| TTCATTCCTGAAGGATGGTA+AGG | + | chr1_2:52077349-52077368 | Msa0076180:intron | 40.0% | |
| TATAGACCTTACCATCCTTC+AGG | - | chr1_2:52077358-52077377 | None:intergenic | 40.0% | |
| GTGATAAGCCTTTCTGTTTC+TGG | + | chr1_2:52077394-52077413 | Msa0076180:intron | 40.0% | |
| TCTTCCATATTTGGCAGACA+TGG | + | chr1_2:52077429-52077448 | Msa0076180:intron | 40.0% | |
| ATATTTGGCAGACATGGACA+GGG | + | chr1_2:52077435-52077454 | Msa0076180:intron | 40.0% | |
| !! | GTTTTCTGGGAATTCTGTAC+TGG | + | chr1_2:52077499-52077518 | Msa0076180:intron | 40.0% |
| AATCTAGTGCAGAACCTCTA+TGG | - | chr1_2:52077604-52077623 | None:intergenic | 40.0% | |
| TGTACGGTTAGACAGTTACA+GGG | - | chr1_2:52077632-52077651 | None:intergenic | 40.0% | |
| TTGTACGGTTAGACAGTTAC+AGG | - | chr1_2:52077633-52077652 | None:intergenic | 40.0% | |
| TAACTGTCTAACCGTACAAC+TGG | + | chr1_2:52077634-52077653 | Msa0076180:intron | 40.0% | |
| CGAAGATATAGGAGTGAAAC+AGG | - | chr1_2:52078124-52078143 | None:intergenic | 40.0% | |
| AATGAAAAGGACCATGATCC+TGG | - | chr1_2:52078171-52078190 | None:intergenic | 40.0% | |
| CCTTACAAAACCGTTTCGTA+AGG | - | chr1_2:52078436-52078455 | None:intergenic | 40.0% | |
| !! | CCTTACGAAACGGTTTTGTA+AGG | + | chr1_2:52078433-52078452 | Msa0076180:intron | 40.0% |
| AGGACATATCACATCCGATT+TGG | + | chr1_2:52078489-52078508 | Msa0076180:intron | 40.0% | |
| GGACATATCACATCCGATTT+GGG | + | chr1_2:52078490-52078509 | Msa0076180:intron | 40.0% | |
| ! | GACATATCACATCCGATTTG+GGG | + | chr1_2:52078491-52078510 | Msa0076180:intron | 40.0% |
| GTGTGATAAGATCCCCAAAT+CGG | - | chr1_2:52078506-52078525 | None:intergenic | 40.0% | |
| CAGGTAACACTTCGATATTC+AGG | - | chr1_2:52078544-52078563 | None:intergenic | 40.0% | |
| ! | ATATCGAAGTGTTACCTGAG+TGG | + | chr1_2:52078546-52078565 | Msa0076180:intron | 40.0% |
| CTGGATGTGATCATGTGATA+AGG | - | chr1_2:52078697-52078716 | None:intergenic | 40.0% | |
| TTGAGACTTGAGTCTCATAC+TGG | - | chr1_2:52078716-52078735 | None:intergenic | 40.0% | |
| TCCTACTGCAAAATACGGTT+GGG | - | chr1_2:52078764-52078783 | None:intergenic | 40.0% | |
| ATCCTACTGCAAAATACGGT+TGG | - | chr1_2:52078765-52078784 | None:intergenic | 40.0% | |
| AATCGTCACTATCTACTTGG+TGG | - | chr1_2:52078941-52078960 | None:intergenic | 40.0% | |
| CATCATGCAAGACATTGTGT+TGG | - | chr1_2:52078994-52079013 | None:intergenic | 40.0% | |
| CAACACAATGTCTTGCATGA+TGG | + | chr1_2:52078992-52079011 | Msa0076180:intron | 40.0% | |
| ! | GTCTTGCATGATGGAACATA+TGG | + | chr1_2:52079001-52079020 | Msa0076180:intron | 40.0% |
| TCATTTGCCTGTTGATCCAA+TGG | + | chr1_2:52079154-52079173 | Msa0076180:intron | 40.0% | |
| AATGCATCCATTGGATCAAC+AGG | - | chr1_2:52079164-52079183 | None:intergenic | 40.0% | |
| ! | TTCATTTGTATTGGTGGGGT+TGG | + | chr1_2:52079274-52079293 | Msa0076180:intron | 40.0% |
| CAAGAGAGAAAGGAACATCA+TGG | - | chr1_2:52079444-52079463 | None:intergenic | 40.0% | |
| ATGTTCCTTTCTCTCTTGTG+TGG | + | chr1_2:52079446-52079465 | Msa0076180:intron | 40.0% | |
| !! | TTGCAAATGGTTGATGAAGC+AGG | + | chr1_2:52079526-52079545 | Msa0076180:intron | 40.0% |
| TTGTTCCTGAGTGTGAAGAA+TGG | + | chr1_2:52079759-52079778 | Msa0076180:CDS | 40.0% | |
| GACCAGCAACTGCTAAAATT+GGG | + | chr1_2:52079912-52079931 | Msa0076180:CDS | 40.0% | |
| ACCAGCAACTGCTAAAATTG+GGG | + | chr1_2:52079913-52079932 | Msa0076180:CDS | 40.0% | |
| ! | CAATTTTCATCAGCGTGATC+TGG | - | chr1_2:52080113-52080132 | None:intergenic | 40.0% |
| CAGTCAGATGTTGAAAGGAA+TGG | + | chr1_2:52080133-52080152 | Msa0076180:CDS | 40.0% | |
| TTGACAGTGATTGTTGATCC+TGG | - | chr1_2:52080271-52080290 | None:intergenic | 40.0% | |
| ATCCAGTTGCCAAAATTCTC+TGG | + | chr1_2:52080363-52080382 | Msa0076180:CDS | 40.0% | |
| !! | TTCCAGAGAATTTTGGCAAC+TGG | - | chr1_2:52080368-52080387 | None:intergenic | 40.0% |
| CTTCTTTGTACTGTGAACCA+TGG | + | chr1_2:52080486-52080505 | Msa0076180:intron | 40.0% | |
| GGGAGACCAATGAAAATTGT+TGG | + | chr1_2:52080796-52080815 | Msa0076180:intron | 40.0% | |
| !! | TGTTGGCTCAACCATTAAGA+AGG | + | chr1_2:52080813-52080832 | Msa0076180:intron | 40.0% |
| ! | GTATGACTGATTCCAACTAG+TGG | + | chr1_2:52080908-52080927 | Msa0076180:intron | 40.0% |
| TGATTCCAACTAGTGGGAAA+AGG | + | chr1_2:52080915-52080934 | Msa0076180:intron | 40.0% | |
| ! | TAACACCTTTTCCCACTAGT+TGG | - | chr1_2:52080923-52080942 | None:intergenic | 40.0% |
| CCACGGCATGATTAAATACA+AGG | - | chr1_2:52081085-52081104 | None:intergenic | 40.0% | |
| CCTTGTATTTAATCATGCCG+TGG | + | chr1_2:52081082-52081101 | Msa0076180:intron | 40.0% | |
| CAACTTCCCAAGAACTTTAG+AGG | + | chr1_2:52081173-52081192 | Msa0076180:CDS | 40.0% | |
| TGCATGTACTATCACCAGTT+GGG | + | chr1_2:52081205-52081224 | Msa0076180:CDS | 40.0% | |
| !! | TTGGTCGCCTTTTTAATTGC+AGG | + | chr1_2:52081360-52081379 | Msa0076180:intron | 40.0% |
| TTGCAGGAATAGATTCTACG+AGG | + | chr1_2:52081376-52081395 | Msa0076180:intron | 40.0% | |
| ! | GAATTCTATTCTGAAGGGGA+AGG | + | chr1_2:52081436-52081455 | Msa0076180:CDS | 40.0% |
| TTCGTCCATATTTACCCTTC+TGG | + | chr1_2:52081521-52081540 | Msa0076180:intron | 40.0% | |
| ACACACCAGAAGGGTAAATA+TGG | - | chr1_2:52081529-52081548 | None:intergenic | 40.0% | |
| TCTAAGTACACACACCAGAA+GGG | - | chr1_2:52081538-52081557 | None:intergenic | 40.0% | |
| GTGTACTTAGAGTCACATGA+AGG | + | chr1_2:52081547-52081566 | Msa0076180:intron | 40.0% | |
| AAGGAAGAGAGAAATGCACA+CGG | + | chr1_2:52081991-52082010 | Msa0076180:intron | 40.0% | |
| ! | GGGTTCACTCACAAAAGTTT+TGG | + | chr1_2:52082024-52082043 | Msa0076180:intron | 40.0% |
| ! | CCCTGAAGCATTCTTTGTAT+TGG | + | chr1_2:52082125-52082144 | Msa0076180:intron | 40.0% |
| CTAGGGCAAAGAACATTGTA+AGG | - | chr1_2:52082170-52082189 | None:intergenic | 40.0% | |
| CAATGTTCTTTGCCCTAGAT+AGG | + | chr1_2:52082172-52082191 | Msa0076180:intron | 40.0% | |
| !! | GTGAAGGTTGTTTTCTCCAT+AGG | - | chr1_2:52082389-52082408 | None:intergenic | 40.0% |
| TTTGAGGGGAGGAAAAGAAT+TGG | - | chr1_2:52082437-52082456 | None:intergenic | 40.0% | |
| ATCAGTTCCATACAGTGGAA+AGG | - | chr1_2:52082470-52082489 | None:intergenic | 40.0% | |
| CAGAATGGGGAATAACAGAA+CGG | - | chr1_2:52082530-52082549 | None:intergenic | 40.0% | |
| AACAACGGCAACAACAGAAT+GGG | - | chr1_2:52082544-52082563 | None:intergenic | 40.0% | |
| TAACAACGGCAACAACAGAA+TGG | - | chr1_2:52082545-52082564 | None:intergenic | 40.0% | |
| AACATTGGGCCACAAAGAAT+GGG | - | chr1_2:52082597-52082616 | None:intergenic | 40.0% | |
| TGGTATGGTCAAGTATTCCA+AGG | - | chr1_2:52082748-52082767 | None:intergenic | 40.0% | |
| AAAGTCTCAATGCACATGCA+GGG | - | chr1_2:52083579-52083598 | None:intergenic | 40.0% | |
| TAAAGTCTCAATGCACATGC+AGG | - | chr1_2:52083580-52083599 | None:intergenic | 40.0% | |
| ! | AATCTAGAATGCTCAAAGCC+AGG | + | chr1_2:52083861-52083880 | Msa0076180:CDS | 40.0% |
| ! | ATCTAGAATGCTCAAAGCCA+GGG | + | chr1_2:52083862-52083881 | Msa0076180:CDS | 40.0% |
| !! | TTTATTCTTCGGAGGTACCT+TGG | - | chr1_2:52083931-52083950 | None:intergenic | 40.0% |
| GATCCAACGAAGAAATGCTT+TGG | - | chr1_2:52083971-52083990 | None:intergenic | 40.0% | |
| GTATCAAATACATAGGGGCT+AGG | - | chr1_2:52084091-52084110 | None:intergenic | 40.0% | |
| CGACTGAGAGTTAATTGTCG+TGG | + | chr1_2:52074813-52074832 | Msa0076180:CDS | 45.0% | |
| AGATTTCACAAGAGAGGGGA+AGG | - | chr1_2:52074922-52074941 | None:intergenic | 45.0% | |
| GACTCGAAGTCGTTAGATGT+GGG | - | chr1_2:52075026-52075045 | None:intergenic | 45.0% | |
| AGACTCGAAGTCGTTAGATG+TGG | - | chr1_2:52075027-52075046 | None:intergenic | 45.0% | |
| TATGCGGTTGCACCAAAACT+TGG | + | chr1_2:52075180-52075199 | Msa0076180:CDS | 45.0% | |
| TTATGGAATCCACGGAACGA+TGG | + | chr1_2:52075215-52075234 | Msa0076180:CDS | 45.0% | |
| ! | TCGTCTGCACCTGTCTTTTA+TGG | + | chr1_2:52075293-52075312 | Msa0076180:intron | 45.0% |
| GTGATCTTGGAAGTCATCAC+AGG | + | chr1_2:52075315-52075334 | Msa0076180:intron | 45.0% | |
| TCAGCAACAACAACATCTGG+AGG | + | chr1_2:52075940-52075959 | Msa0076180:CDS | 45.0% | |
| TTTAGTGCGTGGATGGAACA+AGG | - | chr1_2:52076193-52076212 | None:intergenic | 45.0% | |
| CGTCTGAATGTCTTCCCTTA+GGG | - | chr1_2:52076346-52076365 | None:intergenic | 45.0% | |
| CCTAAGGGAAGACATTCAGA+CGG | + | chr1_2:52076344-52076363 | Msa0076180:CDS | 45.0% | |
| GTGGTGAAAAAACCCATGCT+GGG | - | chr1_2:52076673-52076692 | None:intergenic | 45.0% | |
| AGTGGTGAAAAAACCCATGC+TGG | - | chr1_2:52076674-52076693 | None:intergenic | 45.0% | |
| TTTCACCACTGCAGAAATGC+AGG | + | chr1_2:52076684-52076703 | Msa0076180:intron | 45.0% | |
| !! | GAACTCTATTGGCTTCACAC+TGG | + | chr1_2:52076833-52076852 | Msa0076180:intron | 45.0% |
| GAGGAAGGAAAAGAAGGTAG+GGG | - | chr1_2:52076928-52076947 | None:intergenic | 45.0% | |
| AGGCTTGAGGAAGGAAAAGA+AGG | - | chr1_2:52076934-52076953 | None:intergenic | 45.0% | |
| !! | AATGGATTGAGGCTTGAGGA+AGG | - | chr1_2:52076943-52076962 | None:intergenic | 45.0% |
| !! | CAGAAATGGATTGAGGCTTG+AGG | - | chr1_2:52076947-52076966 | None:intergenic | 45.0% |
| !! | ATAGGCATTGGGTAGAGTGA+GGG | - | chr1_2:52077023-52077042 | None:intergenic | 45.0% |
| CTCTACCCAATGCCTATCTA+TGG | + | chr1_2:52077026-52077045 | Msa0076180:CDS | 45.0% | |
| CTACCCAATGCCTATCTATG+GGG | + | chr1_2:52077028-52077047 | Msa0076180:CDS | 45.0% | |
| CTTCCCCATAGATAGGCATT+GGG | - | chr1_2:52077034-52077053 | None:intergenic | 45.0% | |
| TTGGAAGCTTCCCCATAGAT+AGG | - | chr1_2:52077041-52077060 | None:intergenic | 45.0% | |
| TCCAAGGGCAGAAGACTTAA+TGG | + | chr1_2:52077285-52077304 | Msa0076180:CDS | 45.0% | |
| TCCATTAAGTCTTCTGCCCT+TGG | - | chr1_2:52077289-52077308 | None:intergenic | 45.0% | |
| TGGACAAAAGGTTGTTCTGG+AGG | + | chr1_2:52077312-52077331 | Msa0076180:CDS | 45.0% | |
| CTGTCCATGTCTGCCAAATA+TGG | - | chr1_2:52077436-52077455 | None:intergenic | 45.0% | |
| CATATTTGGCAGACATGGAC+AGG | + | chr1_2:52077434-52077453 | Msa0076180:intron | 45.0% | |
| AGACATGGACAGGGAAACTT+GGG | + | chr1_2:52077444-52077463 | Msa0076180:intron | 45.0% | |
| GATCAGCATGATCACCATAG+AGG | + | chr1_2:52077587-52077606 | Msa0076180:intron | 45.0% | |
| AATGGTGACTGACACACTAG+AGG | + | chr1_2:52077677-52077696 | Msa0076180:intron | 45.0% | |
| ACAGAGATGCAAAAGCTCTC+TGG | + | chr1_2:52077791-52077810 | Msa0076180:intron | 45.0% | |
| TTCTGTGTCAGCACAGCATT+GGG | - | chr1_2:52077862-52077881 | None:intergenic | 45.0% | |
| ATTCTGTGTCAGCACAGCAT+TGG | - | chr1_2:52077863-52077882 | None:intergenic | 45.0% | |
| ! | GTCATCTTTTCCTTGACTCC+AGG | + | chr1_2:52078150-52078169 | Msa0076180:intron | 45.0% |
| TTTCCTTGACTCCAGGATCA+TGG | + | chr1_2:52078157-52078176 | Msa0076180:intron | 45.0% | |
| ! | ATTCAGGTTTGAGCGTGAGA+GGG | - | chr1_2:52078528-52078547 | None:intergenic | 45.0% |
| ! | TATTCAGGTTTGAGCGTGAG+AGG | - | chr1_2:52078529-52078548 | None:intergenic | 45.0% |
| ACGAGTGACCCAATGAATCT+TGG | + | chr1_2:52078575-52078594 | Msa0076180:intron | 45.0% | |
| TACTGCAAAATACGGTTGGG+TGG | - | chr1_2:52078761-52078780 | None:intergenic | 45.0% | |
| ! | ACCCAACCGTATTTTGCAGT+AGG | + | chr1_2:52078760-52078779 | Msa0076180:intron | 45.0% |
| CGCAGAATATTGAGACGGTA+TGG | + | chr1_2:52079038-52079057 | Msa0076180:intron | 45.0% | |
| GATCCAATGGATGCATTCGA+AGG | + | chr1_2:52079167-52079186 | Msa0076180:intron | 45.0% | |
| CAACCTTCGAATGCATCCAT+TGG | - | chr1_2:52079173-52079192 | None:intergenic | 45.0% | |
| TGCTACCACACAAGAGAGAA+AGG | - | chr1_2:52079454-52079473 | None:intergenic | 45.0% | |
| TTCCTGAGTGTGAAGAATGG+AGG | + | chr1_2:52079762-52079781 | Msa0076180:CDS | 45.0% | |
| TCCTGAGTGTGAAGAATGGA+GGG | + | chr1_2:52079763-52079782 | Msa0076180:CDS | 45.0% | |
| GGACCAGCAACTGCTAAAAT+TGG | + | chr1_2:52079911-52079930 | Msa0076180:CDS | 45.0% | |
| !! | TCCCCAATTTTAGCAGTTGC+TGG | - | chr1_2:52079917-52079936 | None:intergenic | 45.0% |
| GCAACTGCTAAAATTGGGGA+CGG | + | chr1_2:52079917-52079936 | Msa0076180:CDS | 45.0% | |
| CAACTGCTAAAATTGGGGAC+GGG | + | chr1_2:52079918-52079937 | Msa0076180:CDS | 45.0% | |
| AATTGGGGACGGGAAAAACT+AGG | + | chr1_2:52079928-52079947 | Msa0076180:CDS | 45.0% | |
| GCTTCATGAACTCGTGTCTT+TGG | + | chr1_2:52080223-52080242 | Msa0076180:CDS | 45.0% | |
| CAAGTAGTTCCCTTTCAAGC+AGG | - | chr1_2:52080717-52080736 | None:intergenic | 45.0% | |
| ! | ATGCTTGGGCTAGATGAGAT+TGG | + | chr1_2:52080998-52081017 | Msa0076180:intron | 45.0% |
| ! | TGCTTGGGCTAGATGAGATT+GGG | + | chr1_2:52080999-52081018 | Msa0076180:intron | 45.0% |
| !! | CGAGAGCCTCTAAAGTTCTT+GGG | - | chr1_2:52081182-52081201 | None:intergenic | 45.0% |
| !! | ACGAGAGCCTCTAAAGTTCT+TGG | - | chr1_2:52081183-52081202 | None:intergenic | 45.0% |
| CTGCATGTACTATCACCAGT+TGG | + | chr1_2:52081204-52081223 | Msa0076180:CDS | 45.0% | |
| GCATGTACTATCACCAGTTG+GGG | + | chr1_2:52081206-52081225 | Msa0076180:CDS | 45.0% | |
| TTGGGGCTGAAGTTCTTACA+CGG | + | chr1_2:52081223-52081242 | Msa0076180:CDS | 45.0% | |
| GAAGGAGCTATTCACACAAC+AGG | + | chr1_2:52081454-52081473 | Msa0076180:CDS | 45.0% | |
| CTCTAAGTACACACACCAGA+AGG | - | chr1_2:52081539-52081558 | None:intergenic | 45.0% | |
| CTGATGGAATGACACATCCT+AGG | + | chr1_2:52081709-52081728 | Msa0076180:intron | 45.0% | |
| !! | TTGTAAGGTATTGCACGGAG+AGG | - | chr1_2:52082155-52082174 | None:intergenic | 45.0% |
| !! | TTAGCTGAGAGGTGTTACTG+GGG | - | chr1_2:52082212-52082231 | None:intergenic | 45.0% |
| !! | GTTAGCTGAGAGGTGTTACT+GGG | - | chr1_2:52082213-52082232 | None:intergenic | 45.0% |
| !! | TGTTAGCTGAGAGGTGTTAC+TGG | - | chr1_2:52082214-52082233 | None:intergenic | 45.0% |
| GGAGAAAACAACCTTCACCA+AGG | + | chr1_2:52082391-52082410 | Msa0076180:intron | 45.0% | |
| GAAAAGCTTTGCCTTGGTGA+AGG | - | chr1_2:52082405-52082424 | None:intergenic | 45.0% | |
| ! | GTAACGGAAAAGCTTTGCCT+TGG | - | chr1_2:52082411-52082430 | None:intergenic | 45.0% |
| TTCCATACAGTGGAAAGGTG+GGG | - | chr1_2:52082465-52082484 | None:intergenic | 45.0% | |
| GTTCCATACAGTGGAAAGGT+GGG | - | chr1_2:52082466-52082485 | None:intergenic | 45.0% | |
| AGTTCCATACAGTGGAAAGG+TGG | - | chr1_2:52082467-52082486 | None:intergenic | 45.0% | |
| AGGGAATCAGTTCCATACAG+TGG | - | chr1_2:52082475-52082494 | None:intergenic | 45.0% | |
| ATGTGTCAATTGGAGAGTGG+AGG | - | chr1_2:52082505-52082524 | None:intergenic | 45.0% | |
| GACATGTGTCAATTGGAGAG+TGG | - | chr1_2:52082508-52082527 | None:intergenic | 45.0% | |
| CAGAACGGACATGTGTCAAT+TGG | - | chr1_2:52082515-52082534 | None:intergenic | 45.0% | |
| ACAACGGCAACAACAGAATG+GGG | - | chr1_2:52082543-52082562 | None:intergenic | 45.0% | |
| GAACATTGGGCCACAAAGAA+TGG | - | chr1_2:52082598-52082617 | None:intergenic | 45.0% | |
| AGGAAAATAAGGGGGAGCAA+GGG | - | chr1_2:52082659-52082678 | None:intergenic | 45.0% | |
| AAGGAAAATAAGGGGGAGCA+AGG | - | chr1_2:52082660-52082679 | None:intergenic | 45.0% | |
| GTCAAGTATTCCAAGGCAAG+TGG | - | chr1_2:52082741-52082760 | None:intergenic | 45.0% | |
| CATGCACTGAAACAGTGATG+AGG | - | chr1_2:52083538-52083557 | None:intergenic | 45.0% | |
| TGTTTCAGTGCATGAGTCTC+TGG | + | chr1_2:52083544-52083563 | Msa0076180:intron | 45.0% | |
| ! | TCTAGAATGCTCAAAGCCAG+GGG | + | chr1_2:52083863-52083882 | Msa0076180:CDS | 45.0% |
| ATGAATGAATTGGCCCACCA+AGG | + | chr1_2:52083911-52083930 | Msa0076180:three_prime_UTR | 45.0% | |
| CGTAACAGCAGCACCAACAT+TGG | - | chr1_2:52074883-52074902 | None:intergenic | 50.0% | |
| ! | ATCTTCTGTGGTGGAGGCTA+TGG | + | chr1_2:52075265-52075284 | Msa0076180:CDS | 50.0% |
| AGTGTTTCGGCCTGTCTGTT+TGG | + | chr1_2:52075414-52075433 | Msa0076180:intron | 50.0% | |
| GTAGAGGAACCTGCAATGCA+AGG | - | chr1_2:52075871-52075890 | None:intergenic | 50.0% | |
| CCGTCTGAATGTCTTCCCTT+AGG | - | chr1_2:52076347-52076366 | None:intergenic | 50.0% | |
| TACCTACTACCTCCCAGCAT+GGG | + | chr1_2:52076658-52076677 | Msa0076180:intron | 50.0% | |
| GTGAAAAAACCCATGCTGGG+AGG | - | chr1_2:52076670-52076689 | None:intergenic | 50.0% | |
| AAGCACCTGCATTTCTGCAG+TGG | - | chr1_2:52076692-52076711 | None:intergenic | 50.0% | |
| ! | TAGAGTGAGGGACTAGCAGA+AGG | - | chr1_2:52077011-52077030 | None:intergenic | 50.0% |
| !! | GATAGGCATTGGGTAGAGTG+AGG | - | chr1_2:52077024-52077043 | None:intergenic | 50.0% |
| GCTTCCCCATAGATAGGCAT+TGG | - | chr1_2:52077035-52077054 | None:intergenic | 50.0% | |
| ATGGGGAAGCTTCCAATCAC+AGG | + | chr1_2:52077045-52077064 | Msa0076180:CDS | 50.0% | |
| !! | CAAAAGGTTGTTCTGGAGGC+AGG | + | chr1_2:52077316-52077335 | Msa0076180:CDS | 50.0% |
| CAGACATGGACAGGGAAACT+TGG | + | chr1_2:52077443-52077462 | Msa0076180:intron | 50.0% | |
| ACTGGCAGTTGCCAGTTGTA+CGG | - | chr1_2:52077648-52077667 | None:intergenic | 50.0% | |
| TGGCAACTGCCAGTTACCTA+GGG | + | chr1_2:52077654-52077673 | Msa0076180:intron | 50.0% | |
| ACTGCCAGTTACCTAGGGAA+TGG | + | chr1_2:52077659-52077678 | Msa0076180:intron | 50.0% | |
| GTCACCATTCCCTAGGTAAC+TGG | - | chr1_2:52077666-52077685 | None:intergenic | 50.0% | |
| TGTGTCAGTCACCATTCCCT+AGG | - | chr1_2:52077673-52077692 | None:intergenic | 50.0% | |
| TTGTAGGTGAGTGATCCCTC+AGG | - | chr1_2:52078085-52078104 | None:intergenic | 50.0% | |
| TCACTCGTTACTGTCCACTC+AGG | - | chr1_2:52078563-52078582 | None:intergenic | 50.0% | |
| GGTCTGATTTAGACACGCAG+AGG | - | chr1_2:52079568-52079587 | None:intergenic | 50.0% | |
| CCTGAGTGTGAAGAATGGAG+GGG | + | chr1_2:52079764-52079783 | Msa0076180:CDS | 50.0% | |
| ATTAGAACCTGCTGCAGTCC+AGG | + | chr1_2:52080199-52080218 | Msa0076180:CDS | 50.0% | |
| ! | ACACGAGTTCATGAAGCACC+TGG | - | chr1_2:52080220-52080239 | None:intergenic | 50.0% |
| CAGTGATTGTTGATCCTGGC+TGG | - | chr1_2:52080267-52080286 | None:intergenic | 50.0% | |
| TTGTACTGTGAACCATGGCG+TGG | + | chr1_2:52080491-52080510 | Msa0076180:intron | 50.0% | |
| TGTACTGTGAACCATGGCGT+GGG | + | chr1_2:52080492-52080511 | Msa0076180:intron | 50.0% | |
| TAGCTAAAACACCCACGCCA+TGG | - | chr1_2:52080506-52080525 | None:intergenic | 50.0% | |
| GTAAGAACTTCAGCCCCAAC+TGG | - | chr1_2:52081222-52081241 | None:intergenic | 50.0% | |
| CCTAGAGAGGCTCCTATCTA+GGG | - | chr1_2:52082187-52082206 | None:intergenic | 50.0% | |
| CAACTAGACTGCTCTCCCTA+TGG | + | chr1_2:52082370-52082389 | Msa0076180:intron | 50.0% | |
| AAAGGTGGGGGTCTGTTTGA+GGG | - | chr1_2:52082452-52082471 | None:intergenic | 50.0% | |
| TCCATACAGTGGAAAGGTGG+GGG | - | chr1_2:52082464-52082483 | None:intergenic | 50.0% | |
| CCACAAAGAATGGGCCTACA+AGG | - | chr1_2:52082588-52082607 | None:intergenic | 50.0% | |
| CCTTGTAGGCCCATTCTTTG+TGG | + | chr1_2:52082585-52082604 | Msa0076180:intron | 50.0% | |
| TTGTGGCCCAATGTTCTCCT+CGG | + | chr1_2:52082602-52082621 | Msa0076180:intron | 50.0% | |
| AAATAAGGGGGAGCAAGGGT+GGG | - | chr1_2:52082655-52082674 | None:intergenic | 50.0% | |
| AAAATAAGGGGGAGCAAGGG+TGG | - | chr1_2:52082656-52082675 | None:intergenic | 50.0% | |
| !! | ACCGGTGCTGTAAAGAACAC+TGG | + | chr1_2:52083009-52083028 | Msa0076180:intron | 50.0% |
| CCCAGTGTTCTTTACAGCAC+CGG | - | chr1_2:52083013-52083032 | None:intergenic | 50.0% | |
| !! | CCGGTGCTGTAAAGAACACT+GGG | + | chr1_2:52083010-52083029 | Msa0076180:intron | 50.0% |
| TTAGCATCTCATCTGACCCC+TGG | - | chr1_2:52083882-52083901 | None:intergenic | 50.0% | |
| !! | TTCTTCGGAGGTACCTTGGT+GGG | - | chr1_2:52083927-52083946 | None:intergenic | 50.0% |
| !! | ATTCTTCGGAGGTACCTTGG+TGG | - | chr1_2:52083928-52083947 | None:intergenic | 50.0% |
| GATTACTTGCAGGCACGGGT+AGG | + | chr1_2:52075242-52075261 | Msa0076180:CDS | 55.0% | |
| ACGGGTAGGATCTTCTGTGG+TGG | + | chr1_2:52075256-52075275 | Msa0076180:CDS | 55.0% | |
| GGTAGGATCTTCTGTGGTGG+AGG | + | chr1_2:52075259-52075278 | Msa0076180:CDS | 55.0% | |
| CATGCTGGGAGGTAGTAGGT+AGG | - | chr1_2:52076659-52076678 | None:intergenic | 55.0% | |
| CTACCTACTACCTCCCAGCA+TGG | + | chr1_2:52076657-52076676 | Msa0076180:intron | 55.0% | |
| AACCCATGCTGGGAGGTAGT+AGG | - | chr1_2:52076663-52076682 | None:intergenic | 55.0% | |
| ! | AGTGAGGGACTAGCAGAAGG+AGG | - | chr1_2:52077008-52077027 | None:intergenic | 55.0% |
| CTGGCAACTGCCAGTTACCT+AGG | + | chr1_2:52077653-52077672 | Msa0076180:intron | 55.0% | |
| GGACCATGATCCTGGAGTCA+AGG | - | chr1_2:52078163-52078182 | None:intergenic | 55.0% | |
| ! | GTATTGGTGGGGTTGGAGAG+TGG | + | chr1_2:52079281-52079300 | Msa0076180:intron | 55.0% |
| GTGGGGTTGGAGAGTGGATA+CGG | + | chr1_2:52079287-52079306 | Msa0076180:intron | 55.0% | |
| CCCCTCCATTCTTCACACTC+AGG | - | chr1_2:52079767-52079786 | None:intergenic | 55.0% | |
| CTTCAGGGTGAAGCTTGAGC+AGG | - | chr1_2:52082113-52082132 | None:intergenic | 55.0% | |
| CCCTAGATAGGAGCCTCTCT+AGG | + | chr1_2:52082184-52082203 | Msa0076180:intron | 55.0% | |
| GCCTAGAGAGGCTCCTATCT+AGG | - | chr1_2:52082188-52082207 | None:intergenic | 55.0% | |
| TGTTACTGGGGAGCCTAGAG+AGG | - | chr1_2:52082200-52082219 | None:intergenic | 55.0% | |
| AAGGTGGGGGTCTGTTTGAG+GGG | - | chr1_2:52082451-52082470 | None:intergenic | 55.0% | |
| GAAAGGTGGGGGTCTGTTTG+AGG | - | chr1_2:52082453-52082472 | None:intergenic | 55.0% | |
| ACCCCCACCTTTCCACTGTA+TGG | + | chr1_2:52082460-52082479 | Msa0076180:intron | 55.0% | |
| GGAGAGTGGAGGATGAGACA+GGG | - | chr1_2:52082494-52082513 | None:intergenic | 55.0% | |
| TGGAGAGTGGAGGATGAGAC+AGG | - | chr1_2:52082495-52082514 | None:intergenic | 55.0% | |
| TGGGGTTGCTGTATCATCCC+AGG | - | chr1_2:52082628-52082647 | None:intergenic | 55.0% | |
| AATAAGGGGGAGCAAGGGTG+GGG | - | chr1_2:52082654-52082673 | None:intergenic | 55.0% | |
| AGTGCATGAGTCTCTGGCGT+TGG | + | chr1_2:52083550-52083569 | Msa0076180:intron | 55.0% | |
| GGCACGGGTAGGATCTTCTG+TGG | + | chr1_2:52075253-52075272 | Msa0076180:CDS | 60.0% | |
| ! | TGAAGCACCTGGACTGCAGC+AGG | - | chr1_2:52080209-52080228 | None:intergenic | 60.0% |
| CAACAGTGTTAGCGCCAGCC+AGG | + | chr1_2:52080250-52080269 | Msa0076180:CDS | 60.0% | |
| CCCAGGCCGAGGAGAACATT+GGG | - | chr1_2:52082611-52082630 | None:intergenic | 60.0% | |
| CCCAATGTTCTCCTCGGCCT+GGG | + | chr1_2:52082608-52082627 | Msa0076180:intron | 60.0% | |
| TCCCAGGCCGAGGAGAACAT+TGG | - | chr1_2:52082612-52082631 | None:intergenic | 60.0% | |
| TGCTGTATCATCCCAGGCCG+AGG | - | chr1_2:52082622-52082641 | None:intergenic | 60.0% | |
| GTGGGGGTCTGTTTGAGGGG+AGG | - | chr1_2:52082448-52082467 | None:intergenic | 65.0% | |
| GCCCAATGTTCTCCTCGGCC+TGG | + | chr1_2:52082607-52082626 | Msa0076180:intron | 65.0% | |
| GGAGCAAGGGTGGGGACGTG+GGG | - | chr1_2:52082646-52082665 | None:intergenic | 70.0% | |
| GGGAGCAAGGGTGGGGACGT+GGG | - | chr1_2:52082647-52082666 | None:intergenic | 70.0% | |
| GGGGAGCAAGGGTGGGGACG+TGG | - | chr1_2:52082648-52082667 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 52074780 | 52084348 | 52074780 | ID=Msa0076180;Name=Msa0076180 |
| chr1_2 | mRNA | 52074780 | 52084348 | 52074780 | ID=Msa0076180-mRNA-1;Parent=Msa0076180;Name=Msa0076180-mRNA-1;_AED=0.17;_eAED=0.17;_QI=18|0.75|0.84|1|1|1|13|455|564 |
| chr1_2 | exon | 52074780 | 52075073 | 52074780 | ID=Msa0076180-mRNA-1:exon:16026;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52075176 | 52075286 | 52075176 | ID=Msa0076180-mRNA-1:exon:16027;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52075881 | 52076054 | 52075881 | ID=Msa0076180-mRNA-1:exon:16028;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52076297 | 52076365 | 52076297 | ID=Msa0076180-mRNA-1:exon:16029;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52076489 | 52076615 | 52076489 | ID=Msa0076180-mRNA-1:exon:16030;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52076994 | 52077066 | 52076994 | ID=Msa0076180-mRNA-1:exon:16031;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52077249 | 52077365 | 52077249 | ID=Msa0076180-mRNA-1:exon:16032;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52079715 | 52079785 | 52079715 | ID=Msa0076180-mRNA-1:exon:16033;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52079907 | 52079987 | 52079907 | ID=Msa0076180-mRNA-1:exon:16034;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52080114 | 52080430 | 52080114 | ID=Msa0076180-mRNA-1:exon:16035;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52081171 | 52081286 | 52081171 | ID=Msa0076180-mRNA-1:exon:16036;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52081382 | 52081475 | 52081382 | ID=Msa0076180-mRNA-1:exon:16037;Parent=Msa0076180-mRNA-1 |
| chr1_2 | exon | 52083825 | 52084348 | 52083825 | ID=Msa0076180-mRNA-1:exon:16038;Parent=Msa0076180-mRNA-1 |
| chr1_2 | five_prime_UTR | 52074780 | 52074797 | 52074780 | ID=Msa0076180-mRNA-1:five_prime_utr;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52074798 | 52075073 | 52074798 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52075176 | 52075286 | 52075176 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52075881 | 52076054 | 52075881 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52076297 | 52076365 | 52076297 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52076489 | 52076615 | 52076489 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52076994 | 52077066 | 52076994 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52077249 | 52077365 | 52077249 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52079715 | 52079785 | 52079715 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52079907 | 52079987 | 52079907 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52080114 | 52080430 | 52080114 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52081171 | 52081286 | 52081171 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52081382 | 52081475 | 52081382 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | CDS | 52083825 | 52083893 | 52083825 | ID=Msa0076180-mRNA-1:cds;Parent=Msa0076180-mRNA-1 |
| chr1_2 | three_prime_UTR | 52083894 | 52084348 | 52083894 | ID=Msa0076180-mRNA-1:three_prime_utr;Parent=Msa0076180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
