Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168580 | sp|Q8RWR1|JMJ30_ARATH | 30.712 | 267 | 122 | 10 | 27 | 277 | 207 | 426 | 4.53e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168580 | G7ICR6 | 91.481 | 540 | 24 | 4 | 1 | 519 | 1 | 539 | 0.0 | 995 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028330 | Msa0168580 | 0.802293 | 6.009547e-49 | -8.615850e-47 |
| Msa0076180 | Msa0168580 | 0.863757 | 1.981974e-64 | -8.615850e-47 |
| Msa0095850 | Msa0168580 | 0.809995 | 1.436527e-50 | -8.615850e-47 |
| Msa0168580 | Msa0271510 | 0.806290 | 8.836371e-50 | -8.615850e-47 |
| Msa0168580 | Msa0398670 | 0.807848 | 4.135467e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168580 | MtrunA17_Chr1g0185111 | 91.481 | 540 | 24 | 4 | 1 | 519 | 1 | 539 | 0.0 | 995 |
| Msa0168580 | MtrunA17_Chr4g0033081 | 39.610 | 154 | 77 | 6 | 122 | 271 | 263 | 404 | 4.16e-22 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168580 | AT5G19840.1 | 51.115 | 538 | 209 | 9 | 7 | 511 | 10 | 526 | 3.58e-178 | 512 |
| Msa0168580 | AT5G19840.2 | 48.052 | 539 | 208 | 10 | 7 | 497 | 10 | 524 | 4.68e-159 | 464 |
| Msa0168580 | AT3G20810.1 | 30.712 | 267 | 122 | 10 | 27 | 277 | 196 | 415 | 4.26e-23 | 102 |
| Msa0168580 | AT3G20810.2 | 30.712 | 267 | 122 | 10 | 27 | 277 | 207 | 426 | 4.61e-23 | 102 |
| Msa0168580 | AT3G20810.3 | 31.048 | 248 | 108 | 10 | 27 | 258 | 196 | 396 | 5.49e-19 | 89.4 |
Find 154 sgRNAs with CRISPR-Local
Find 600 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAGAGCTTTCTCTTTA+TGG | 0.052884 | 1_4:+51364902 | Msa0168580:CDS |
| ATTGGGAGCTTCTTTATTTC+AGG | 0.161998 | 1_4:-51373897 | None:intergenic |
| GGACCAGCAACTGCTAAAAT+TGG | 0.210930 | 1_4:+51369615 | Msa0168580:intron |
| GTTGAAAGGAATGGATTTAA+AGG | 0.248023 | 1_4:+51369846 | Msa0168580:CDS |
| TTACTTGCTCTTCCATTCTT+AGG | 0.256470 | 1_4:-51369673 | None:intergenic |
| TTTGACATTCCAGAGAATTT+TGG | 0.260261 | 1_4:-51370076 | None:intergenic |
| TATTTCAGGAAAATATTAAA+TGG | 0.260967 | 1_4:-51373883 | None:intergenic |
| TCCAAGGGCAGAAGACTTAA+TGG | 0.263974 | 1_4:+51366989 | Msa0168580:CDS |
| CTAGTTTAGCTAGTTCAAAT+TGG | 0.270035 | 1_4:-51373952 | None:intergenic |
| CTCTACCCAATGCCTATCTA+TGG | 0.271872 | 1_4:+51366730 | Msa0168580:CDS |
| CTAGTTTAGCTAGTTCAAAT+TGG | 0.291464 | 1_4:-51373915 | None:intergenic |
| GCTTCATGAACTCGTGTCTT+TGG | 0.293768 | 1_4:+51369927 | Msa0168580:CDS |
| TTACTATTGCTATTAACTTT+TGG | 0.296412 | 1_4:+51368665 | Msa0168580:CDS |
| AGAGAAAGCTCTCCAAGTTT+TGG | 0.315791 | 1_4:-51364896 | None:intergenic |
| CCGTCTGAATGTCTTCCCTT+AGG | 0.329877 | 1_4:-51366048 | None:intergenic |
| CAACTTCCCAAGAACTTTAG+AGG | 0.336480 | 1_4:+51370876 | Msa0168580:CDS |
| GCAGAAGACTTAATGGAGTT+TGG | 0.345127 | 1_4:+51366996 | Msa0168580:CDS |
| CCTTGGATAAATTGAGTAAT+CGG | 0.353609 | 1_4:-51366973 | None:intergenic |
| TGCGCTAAATAAATTTGTTC+GGG | 0.359336 | 1_4:-51365735 | None:intergenic |
| GTTTGGACAAAAGGTTGTTC+TGG | 0.361014 | 1_4:+51367013 | Msa0168580:CDS |
| ACGAGAGCCTCTAAAGTTCT+TGG | 0.362653 | 1_4:-51370883 | None:intergenic |
| AGTGAACTTTATGAATGAAT+TGG | 0.363017 | 1_4:+51373620 | Msa0168580:three_prime_UTR |
| TTTGATCGTTTGAAGTTTGA+AGG | 0.368858 | 1_4:-51364663 | None:intergenic |
| CTTAATGGAGTTTGGACAAA+AGG | 0.372824 | 1_4:+51367004 | Msa0168580:CDS |
| AAATCAAGGAAAGTAGAAAA+TGG | 0.379020 | 1_4:-51365594 | None:intergenic |
| AACTGTCTTCTATAAATTTG+TGG | 0.379402 | 1_4:+51366215 | Msa0168580:CDS |
| CTGCGCTAAATAAATTTGTT+CGG | 0.380933 | 1_4:-51365736 | None:intergenic |
| TGCATGTACTATCACCAGTT+GGG | 0.384920 | 1_4:+51370908 | Msa0168580:CDS |
| TCCATTAAGTCTTCTGCCCT+TGG | 0.385486 | 1_4:-51366990 | None:intergenic |
| ATATGCATCAATTTATTCTT+CGG | 0.391730 | 1_4:-51373658 | None:intergenic |
| AATGTATTGGACAAATTTGT+GGG | 0.394832 | 1_4:+51373553 | Msa0168580:CDS |
| CGTCTGAATGTCTTCCCTTA+GGG | 0.396196 | 1_4:-51366047 | None:intergenic |
| AACAGTTGTTAGTGTTGTAT+AGG | 0.398057 | 1_4:+51373765 | Msa0168580:three_prime_UTR |
| TCGTAAGGAGAAAGTTCAAT+TGG | 0.399065 | 1_4:+51366021 | Msa0168580:CDS |
| AACTTCAAACGATCAAAGTA+TGG | 0.400916 | 1_4:+51364669 | Msa0168580:exon |
| TATAGACCTTACCATCCTTC+AGG | 0.402206 | 1_4:-51367059 | None:intergenic |
| CGATGGTTTAGATTACTTGC+AGG | 0.403301 | 1_4:+51364936 | Msa0168580:CDS |
| TAGGAAGTTCTTCGTATCTT+CGG | 0.403487 | 1_4:-51364708 | None:intergenic |
| AAATGTATTGGACAAATTTG+TGG | 0.410927 | 1_4:+51373552 | Msa0168580:CDS |
| ATCTTCTGTGGTGGAGGCTA+TGG | 0.410951 | 1_4:+51364969 | Msa0168580:CDS |
| AAAGGAGAAAAGACTTAAAG+AGG | 0.411316 | 1_4:+51369864 | Msa0168580:CDS |
| GACCAGCAACTGCTAAAATT+GGG | 0.413196 | 1_4:+51369616 | Msa0168580:CDS |
| TAGTTTAGCTAGTTCAAATT+GGG | 0.416275 | 1_4:-51373914 | None:intergenic |
| TGTCTTGTACATTGATTAGT+TGG | 0.417239 | 1_4:+51374002 | Msa0168580:three_prime_UTR |
| CGATGTATCATGACGATTAG+TGG | 0.417703 | 1_4:-51364490 | None:intergenic |
| AACTCAGCAACAACAACATC+TGG | 0.418124 | 1_4:+51365641 | Msa0168580:CDS |
| CATATAACTTACCTTGTTTG+AGG | 0.419995 | 1_4:-51366309 | None:intergenic |
| TCCGTTTCTTACACAAATCA+AGG | 0.421905 | 1_4:-51365608 | None:intergenic |
| TTCAGTGTATCAAATACATA+GGG | 0.424971 | 1_4:-51373813 | None:intergenic |
| CTTGGATAAATTGAGTAATC+GGG | 0.430456 | 1_4:-51366972 | None:intergenic |
| TAGTTTAGCTAGTTCAAATT+GGG | 0.433414 | 1_4:-51373951 | None:intergenic |
| ATCCAGTTGCCAAAATTCTC+TGG | 0.437695 | 1_4:+51370067 | Msa0168580:CDS |
| AAACCAAAGCATTTCTTCGT+TGG | 0.439277 | 1_4:+51373684 | Msa0168580:three_prime_UTR |
| GTCTTGCATGATGGAACATA+TGG | 0.439711 | 1_4:+51368705 | Msa0168580:CDS |
| TTCTTCGGAGGTACCTTGGT+GGG | 0.440392 | 1_4:-51373643 | None:intergenic |
| TATGCGGTTGCACCAAAACT+TGG | 0.441510 | 1_4:+51364884 | Msa0168580:CDS |
| ATAAATGATTATGATCTCAT+AGG | 0.445329 | 1_4:+51370000 | Msa0168580:CDS |
| GATCCAACGAAGAAATGCTT+TGG | 0.446004 | 1_4:-51373687 | None:intergenic |
| TCAAAATGTCTTTCTTGCTA+TGG | 0.460266 | 1_4:+51370110 | Msa0168580:CDS |
| TACACGGAAATTTGATGAGA+TGG | 0.460378 | 1_4:+51370942 | Msa0168580:CDS |
| CGCAGAATATTGAGAAGGTA+TGG | 0.461474 | 1_4:+51368742 | Msa0168580:CDS |
| CAGTCAGATGTTGAAAGGAA+TGG | 0.465665 | 1_4:+51369837 | Msa0168580:CDS |
| CAAAAGGTTGTTCTGGAGGC+AGG | 0.466338 | 1_4:+51367020 | Msa0168580:CDS |
| AAGGAGAAAAGACTTAAAGA+GGG | 0.467339 | 1_4:+51369865 | Msa0168580:CDS |
| CGAGAGCCTCTAAAGTTCTT+GGG | 0.468427 | 1_4:-51370882 | None:intergenic |
| TCCTTGATTTGTGTAAGAAA+CGG | 0.469402 | 1_4:+51365607 | Msa0168580:CDS |
| CCATTGAGTATACCTGTGAT+TGG | 0.477258 | 1_4:-51366761 | None:intergenic |
| TTCAGGAAAATATTAAATGG+TGG | 0.477903 | 1_4:-51373880 | None:intergenic |
| ATTCAGTGTATCAAATACAT+AGG | 0.480443 | 1_4:-51373814 | None:intergenic |
| GTATCAAATACATAGGGGCT+AGG | 0.484996 | 1_4:-51373807 | None:intergenic |
| TCAGGAAAATATTAAATGGT+GGG | 0.485206 | 1_4:-51373879 | None:intergenic |
| GTAAGAACTTCAGCCCCAAC+TGG | 0.503073 | 1_4:-51370922 | None:intergenic |
| GCTTCCCCATAGATAGGCAT+TGG | 0.503987 | 1_4:-51366736 | None:intergenic |
| TGAAGCACCTGGACTGCAGC+AGG | 0.504273 | 1_4:-51369910 | None:intergenic |
| TTTATTCTTCGGAGGTACCT+TGG | 0.505283 | 1_4:-51373647 | None:intergenic |
| CGTAAGGAGAAAGTTCAATT+GGG | 0.506701 | 1_4:+51366022 | Msa0168580:CDS |
| CAACAGTGTTAGCGCCAGCC+AGG | 0.511294 | 1_4:+51369954 | Msa0168580:CDS |
| GCGAACACGCTTCCTAAGAA+TGG | 0.516538 | 1_4:+51369661 | Msa0168580:CDS |
| TTGACAGTGATTGTTGATCC+TGG | 0.517753 | 1_4:-51369972 | None:intergenic |
| CAGTGATTGTTGATCCTGGC+TGG | 0.519786 | 1_4:-51369968 | None:intergenic |
| CAACACAATGTCTTGCATGA+TGG | 0.520074 | 1_4:+51368696 | Msa0168580:CDS |
| GACTGAGAGTTAATTGTCGT+GGG | 0.521563 | 1_4:+51364518 | Msa0168580:five_prime_UTR |
| AATCTAGAATGCTCAAAGCC+AGG | 0.521753 | 1_4:+51373580 | Msa0168580:CDS |
| TTGGAAGCTTCCCCATAGAT+AGG | 0.523469 | 1_4:-51366742 | None:intergenic |
| CGAACAAATTTATTTAGCGC+AGG | 0.525937 | 1_4:+51365737 | Msa0168580:CDS |
| GAAGGAGCTATTCACACAAC+AGG | 0.526957 | 1_4:+51371157 | Msa0168580:CDS |
| TCATTGTGTTGCTTCGCAAA+CGG | 0.527120 | 1_4:+51365674 | Msa0168580:CDS |
| CTTTCTCTTTATGGAATCCA+CGG | 0.528143 | 1_4:+51364911 | Msa0168580:CDS |
| TCTACCCAATGCCTATCTAT+GGG | 0.528926 | 1_4:+51366731 | Msa0168580:CDS |
| CTGCATGTACTATCACCAGT+TGG | 0.532800 | 1_4:+51370907 | Msa0168580:CDS |
| AAGTTCAATTGGGAACCCTA+AGG | 0.532991 | 1_4:+51366032 | Msa0168580:CDS |
| ATCTAGAATGCTCAAAGCCA+GGG | 0.534129 | 1_4:+51373581 | Msa0168580:CDS |
| AGCAATGAATTCTATTCTGA+AGG | 0.535974 | 1_4:+51371133 | Msa0168580:CDS |
| GCAACTGCTAAAATTGGGGA+TGG | 0.539515 | 1_4:+51369621 | Msa0168580:CDS |
| ATGGGGAAGCTTCCAATCAC+AGG | 0.540697 | 1_4:+51366749 | Msa0168580:CDS |
| AATTGCAGTCAGATGTTGAA+AGG | 0.542508 | 1_4:+51369832 | Msa0168580:CDS |
| AAACGATCAAAGTATGGAAG+AGG | 0.545703 | 1_4:+51364675 | Msa0168580:exon |
| GCAATGAATTCTATTCTGAA+GGG | 0.548337 | 1_4:+51371134 | Msa0168580:CDS |
| TTAGCATCTCATCTGACCCC+TGG | 0.550595 | 1_4:-51373598 | None:intergenic |
| CCGATTACTCAATTTATCCA+AGG | 0.551976 | 1_4:+51366973 | Msa0168580:CDS |
| AATTTCAGATTTCACAAGAG+AGG | 0.552328 | 1_4:-51364629 | None:intergenic |
| AATCGTCACTATCTACTTGG+TGG | 0.552384 | 1_4:-51368642 | None:intergenic |
| GGTAGGATCTTCTGTGGTGG+AGG | 0.552390 | 1_4:+51364963 | Msa0168580:CDS |
| CTTCCCCATAGATAGGCATT+GGG | 0.552590 | 1_4:-51366735 | None:intergenic |
| CGACTGAGAGTTAATTGTCG+TGG | 0.554341 | 1_4:+51364517 | Msa0168580:five_prime_UTR |
| TAAAATCGTCACTATCTACT+TGG | 0.557534 | 1_4:-51368645 | None:intergenic |
| CGTTACAGCAGCACCAACAT+TGG | 0.561868 | 1_4:-51364584 | None:intergenic |
| ATTCTTCGGAGGTACCTTGG+TGG | 0.562177 | 1_4:-51373644 | None:intergenic |
| GATGGATGAACTAACTATTG+AGG | 0.566538 | 1_4:+51370960 | Msa0168580:CDS |
| TGCATCAATTTATTCTTCGG+AGG | 0.571173 | 1_4:-51373655 | None:intergenic |
| AGTTCAATTGGGAACCCTAA+GGG | 0.576376 | 1_4:+51366033 | Msa0168580:CDS |
| AACTAACTATTGAGGAAGAT+CGG | 0.577756 | 1_4:+51370968 | Msa0168580:CDS |
| GTTTAGATTACTTGCAGGCA+CGG | 0.581262 | 1_4:+51364941 | Msa0168580:CDS |
| AGGAAAGTAGAAAATGGTAG+AGG | 0.582577 | 1_4:-51365588 | None:intergenic |
| TATCAAATACATAGGGGCTA+GGG | 0.583187 | 1_4:-51373806 | None:intergenic |
| CATCATGCAAGACATTGTGT+TGG | 0.583461 | 1_4:-51368695 | None:intergenic |
| TTTAGATTACTTGCAGGCAC+GGG | 0.584855 | 1_4:+51364942 | Msa0168580:CDS |
| GATCATGAACAGTAATCGTA+AGG | 0.587526 | 1_4:+51366006 | Msa0168580:CDS |
| TTACGATTACTGTTCATGAT+CGG | 0.587845 | 1_4:-51366004 | None:intergenic |
| GACTCGAAGTCGTTAGATGT+AGG | 0.592994 | 1_4:-51364727 | None:intergenic |
| TGGACAAAAGGTTGTTCTGG+AGG | 0.593855 | 1_4:+51367016 | Msa0168580:CDS |
| AAACTATGCACAAAAGATTG+TGG | 0.597530 | 1_4:-51366282 | None:intergenic |
| CGATTACTCAATTTATCCAA+GGG | 0.598981 | 1_4:+51366974 | Msa0168580:CDS |
| GTACAAGACATAATTATACA+TGG | 0.599435 | 1_4:-51373989 | None:intergenic |
| AGGAGAAAAGACTTAAAGAG+GGG | 0.599672 | 1_4:+51369866 | Msa0168580:CDS |
| GCATGTACTATCACCAGTTG+GGG | 0.599762 | 1_4:+51370909 | Msa0168580:CDS |
| CAGGAAAATATTAAATGGTG+GGG | 0.602135 | 1_4:-51373878 | None:intergenic |
| TAGAGTGAGGGACTAGCAGA+AGG | 0.603258 | 1_4:-51366712 | None:intergenic |
| ATTTACGCAGAATATTGAGA+AGG | 0.605758 | 1_4:+51368737 | Msa0168580:CDS |
| GAATTCTATTCTGAAGGGGA+AGG | 0.607819 | 1_4:+51371139 | Msa0168580:CDS |
| ATAGTTTCTGGCCTCAAACA+AGG | 0.607916 | 1_4:+51366298 | Msa0168580:CDS |
| GATTACTTGCAGGCACGGGT+AGG | 0.611307 | 1_4:+51364946 | Msa0168580:CDS |
| ACCAGCAACTGCTAAAATTG+GGG | 0.620256 | 1_4:+51369617 | Msa0168580:CDS |
| CAACTGCTAAAATTGGGGAT+GGG | 0.621871 | 1_4:+51369622 | Msa0168580:CDS |
| AACGATCAAAGTATGGAAGA+GGG | 0.625523 | 1_4:+51364676 | Msa0168580:exon |
| CAATGAATTCTATTCTGAAG+GGG | 0.626132 | 1_4:+51371135 | Msa0168580:CDS |
| TTATGGAATCCACGGAACGA+TGG | 0.627037 | 1_4:+51364919 | Msa0168580:CDS |
| TTGGATAAATTGAGTAATCG+GGG | 0.627533 | 1_4:-51366971 | None:intergenic |
| GATAGGCATTGGGTAGAGTG+AGG | 0.631689 | 1_4:-51366725 | None:intergenic |
| ATGAATGAATTGGCCCACCA+AGG | 0.636345 | 1_4:+51373630 | Msa0168580:three_prime_UTR |
| TAATCTAAACCATCGTTCCG+TGG | 0.637577 | 1_4:-51364928 | None:intergenic |
| ATAGGCATTGGGTAGAGTGA+GGG | 0.639856 | 1_4:-51366724 | None:intergenic |
| GGCACGGGTAGGATCTTCTG+TGG | 0.658645 | 1_4:+51364957 | Msa0168580:CDS |
| TCAGCAACAACAACATCTGG+AGG | 0.661278 | 1_4:+51365644 | Msa0168580:CDS |
| AGTGAGGGACTAGCAGAAGG+AGG | 0.665357 | 1_4:-51366709 | None:intergenic |
| TTGGGGCTGAAGTTCTTACA+CGG | 0.669048 | 1_4:+51370926 | Msa0168580:CDS |
| CTACCCAATGCCTATCTATG+GGG | 0.674740 | 1_4:+51366732 | Msa0168580:CDS |
| ACGGGTAGGATCTTCTGTGG+TGG | 0.683705 | 1_4:+51364960 | Msa0168580:CDS |
| TCTAGAATGCTCAAAGCCAG+GGG | 0.685468 | 1_4:+51373582 | Msa0168580:CDS |
| ACTGAGAGTTAATTGTCGTG+GGG | 0.709422 | 1_4:+51364519 | Msa0168580:five_prime_UTR |
| ATGCACAAAAGATTGTGGTG+TGG | 0.710216 | 1_4:-51366277 | None:intergenic |
| TCAGTGTATCAAATACATAG+GGG | 0.710953 | 1_4:-51373812 | None:intergenic |
| CCTAAGGGAAGACATTCAGA+CGG | 0.717846 | 1_4:+51366048 | Msa0168580:CDS |
| TTGCAGGAATAGATTCTACG+AGG | 0.728407 | 1_4:+51371079 | Msa0168580:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAGTACTAATAT+TGG | - | chr1_4:51365830-51365849 | None:intergenic | 10.0% |
| !! | CATTAAATAAATTAAAACAT+CGG | - | chr1_4:51366475-51366494 | None:intergenic | 10.0% |
| !!! | TATTATTTTTTCATTTGTAT+TGG | + | chr1_4:51368969-51368988 | Msa0168580:intron | 10.0% |
| !!! | AATTATGATTTTTTTTTAAG+AGG | + | chr1_4:51370232-51370251 | Msa0168580:intron | 10.0% |
| !! | AAATAATCATAATACTTAAA+TGG | - | chr1_4:51371497-51371516 | None:intergenic | 10.0% |
| !!! | ATTTTACATATTAAAAAAGT+TGG | + | chr1_4:51374034-51374053 | Msa0168580:three_prime_UTR | 10.0% |
| !!! | TTTTACATATTAAAAAAGTT+GGG | + | chr1_4:51374035-51374054 | Msa0168580:three_prime_UTR | 10.0% |
| !! | TAGAAATAGATTATACATAA+AGG | - | chr1_4:51365341-51365360 | None:intergenic | 15.0% |
| !! | AAATGAAAAAATAATAGTGT+AGG | - | chr1_4:51368965-51368984 | None:intergenic | 15.0% |
| !! | ATCTATTAAGTTTAGTAAAT+TGG | - | chr1_4:51371673-51371692 | None:intergenic | 15.0% |
| !! | TTATTATTCCAAAAATCTAT+TGG | - | chr1_4:51372614-51372633 | None:intergenic | 15.0% |
| !! | TAATAACATTTAATGTAGAT+AGG | + | chr1_4:51372628-51372647 | Msa0168580:intron | 15.0% |
| !!! | AAATAAAAAAACAGTTTGTT+TGG | - | chr1_4:51373113-51373132 | None:intergenic | 15.0% |
| !! | ATGTTAATTAAACTAATCAA+AGG | + | chr1_4:51373408-51373427 | Msa0168580:intron | 15.0% |
| !! | TATTTCAGGAAAATATTAAA+TGG | - | chr1_4:51373886-51373905 | None:intergenic | 15.0% |
| !!! | TTGATTTTTCTAACCTAAAA+AGG | + | chr1_4:51364858-51364877 | Msa0168580:intron | 20.0% |
| !!! | ACTTATTTGATTTTATCTAG+TGG | - | chr1_4:51365305-51365324 | None:intergenic | 20.0% |
| !! | AATAAGCTAAAATCAACTTA+TGG | + | chr1_4:51365439-51365458 | Msa0168580:intron | 20.0% |
| !!! | TCTTTTCAATAAAATTCTTG+TGG | + | chr1_4:51366927-51366946 | Msa0168580:intron | 20.0% |
| !!! | TTTTGTGTTTAAAATGCAAT+TGG | + | chr1_4:51368494-51368513 | Msa0168580:intron | 20.0% |
| !! | TTTACATAAATAAACTTCTC+AGG | + | chr1_4:51368562-51368581 | Msa0168580:intron | 20.0% |
| !!! | TTACTATTGCTATTAACTTT+TGG | + | chr1_4:51368665-51368684 | Msa0168580:CDS | 20.0% |
| !!! | TATTTTTTCATTTGTATTGG+TGG | + | chr1_4:51368972-51368991 | Msa0168580:intron | 20.0% |
| !!! | ATTTTTTCATTTGTATTGGT+GGG | + | chr1_4:51368973-51368992 | Msa0168580:intron | 20.0% |
| !!! | CATCTAAAAAATTCTGAAAA+AGG | - | chr1_4:51369108-51369127 | None:intergenic | 20.0% |
| !!! | AAGTTAGTTGTTTTTGTAAT+GGG | + | chr1_4:51369563-51369582 | Msa0168580:intron | 20.0% |
| !! | CAAGTAAGATAATTAGAAAA+TGG | + | chr1_4:51369689-51369708 | Msa0168580:intron | 20.0% |
| !! | ATAAATGATTATGATCTCAT+AGG | + | chr1_4:51370000-51370019 | Msa0168580:CDS | 20.0% |
| !!! | TTTATTTTTCTCATTTTCTC+AGG | + | chr1_4:51370355-51370374 | Msa0168580:intron | 20.0% |
| !! | TAAATCTATATCCTTCTTAA+TGG | - | chr1_4:51370529-51370548 | None:intergenic | 20.0% |
| !! | AAGAAGGATATAGATTTAAA+TGG | + | chr1_4:51370531-51370550 | Msa0168580:intron | 20.0% |
| !!! | AAGATAACATCGTATTATTT+TGG | + | chr1_4:51371044-51371063 | Msa0168580:intron | 20.0% |
| !! | TTATTTGAAAAATAGTTCAC+AGG | + | chr1_4:51371511-51371530 | Msa0168580:intron | 20.0% |
| !! | TTACTAAACTTAATAGATCA+AGG | + | chr1_4:51371675-51371694 | Msa0168580:intron | 20.0% |
| !! | AAAATCCAATTAATTGTGTT+CGG | - | chr1_4:51371767-51371786 | None:intergenic | 20.0% |
| !! | ATAACAAAAATTATCATGGA+AGG | - | chr1_4:51372382-51372401 | None:intergenic | 20.0% |
| !! | TGCTATAACAAAAATTATCA+TGG | - | chr1_4:51372386-51372405 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTTGTTATAGC+AGG | + | chr1_4:51372385-51372404 | Msa0168580:intron | 20.0% |
| !! | GAATATATAGTTTATACACA+AGG | - | chr1_4:51372508-51372527 | None:intergenic | 20.0% |
| !!! | AAATTACTCCAATAGATTTT+TGG | + | chr1_4:51372603-51372622 | Msa0168580:intron | 20.0% |
| !! | ATAAGCAAAAAAATGTCTAT+TGG | - | chr1_4:51372681-51372700 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCATGACTGTAT+CGG | - | chr1_4:51372789-51372808 | None:intergenic | 20.0% |
| !! | GCATAAAATAATATTGTACA+TGG | - | chr1_4:51373009-51373028 | None:intergenic | 20.0% |
| !! | ATAAAATGTCATCAATGTTA+AGG | - | chr1_4:51373036-51373055 | None:intergenic | 20.0% |
| !! | TATTAGATGTTAAAAACTTC+AGG | + | chr1_4:51373437-51373456 | Msa0168580:intron | 20.0% |
| !! | ATATGCATCAATTTATTCTT+CGG | - | chr1_4:51373661-51373680 | None:intergenic | 20.0% |
| ! | GTAGTTATTGTAAGCTATAT+CGG | + | chr1_4:51365404-51365423 | Msa0168580:intron | 25.0% |
| ! | CTTATTTCAACTTACGAAAA+CGG | - | chr1_4:51365477-51365496 | None:intergenic | 25.0% |
| ! | TGAAATAAGGCAATCAAAAT+TGG | + | chr1_4:51365488-51365507 | Msa0168580:intron | 25.0% |
| ! | TTGGTACTATTTATGTGATA+TGG | + | chr1_4:51365507-51365526 | Msa0168580:intron | 25.0% |
| ! | TGGTACTATTTATGTGATAT+GGG | + | chr1_4:51365508-51365527 | Msa0168580:intron | 25.0% |
| ! | AAATCAAGGAAAGTAGAAAA+TGG | - | chr1_4:51365597-51365616 | None:intergenic | 25.0% |
| !!! | GCACTAAATTGATATTTTGA+CGG | + | chr1_4:51365909-51365928 | Msa0168580:intron | 25.0% |
| !!! | TGTGTTTTGAACTGAATTTT+TGG | + | chr1_4:51365964-51365983 | Msa0168580:intron | 25.0% |
| !!! | ATTTTTGGTGATTGTACTTT+AGG | + | chr1_4:51365979-51365998 | Msa0168580:intron | 25.0% |
| !! | AGTTCTTTTGATCCTAAAAA+TGG | - | chr1_4:51366199-51366218 | None:intergenic | 25.0% |
| ! | AACTGTCTTCTATAAATTTG+TGG | + | chr1_4:51366215-51366234 | Msa0168580:CDS | 25.0% |
| !! | AATAACATATAGCAGAGTTT+TGG | + | chr1_4:51366515-51366534 | Msa0168580:intron | 25.0% |
| ! | GCAGAATCATAAAAAGAAAA+TGG | - | chr1_4:51366563-51366582 | None:intergenic | 25.0% |
| ! | GTTTCATTAAATGACAGAAA+TGG | - | chr1_4:51366665-51366684 | None:intergenic | 25.0% |
| ! | ACAAAACAACTGCAAAATTT+CGG | - | chr1_4:51366687-51366706 | None:intergenic | 25.0% |
| ! | ACTACATCAATACATATAGA+GGG | - | chr1_4:51366797-51366816 | None:intergenic | 25.0% |
| ! | TACTACATCAATACATATAG+AGG | - | chr1_4:51366798-51366817 | None:intergenic | 25.0% |
| !! | ATGTATTGATGTAGTAAACA+CGG | + | chr1_4:51366802-51366821 | Msa0168580:intron | 25.0% |
| ! | TTGAAAAGAAAGACAAAAGA+AGG | - | chr1_4:51366916-51366935 | None:intergenic | 25.0% |
| !! | GATTATTTCTCTTCCATATT+TGG | + | chr1_4:51367124-51367143 | Msa0168580:intron | 25.0% |
| !! | GATTTTATTACAGTTACAAG+AGG | - | chr1_4:51367440-51367459 | None:intergenic | 25.0% |
| ! | AATATGCATGAATTCTTTCT+CGG | - | chr1_4:51367616-51367635 | None:intergenic | 25.0% |
| ! | AGAATTCATGCATATTTGTT+TGG | + | chr1_4:51367620-51367639 | Msa0168580:intron | 25.0% |
| !!! | TTTTAGAAAATGACTAAAGC+TGG | - | chr1_4:51367750-51367769 | None:intergenic | 25.0% |
| !! | TTATTGGTTGTTGGTTAAAA+TGG | + | chr1_4:51367894-51367913 | Msa0168580:intron | 25.0% |
| !!! | AATGAATTTTAACTGCATCT+AGG | - | chr1_4:51368014-51368033 | None:intergenic | 25.0% |
| ! | CTGAAAATGTGTTTATAAGT+GGG | - | chr1_4:51368175-51368194 | None:intergenic | 25.0% |
| !!! | CTAGAAAAGCATTTATAAGT+GGG | - | chr1_4:51368377-51368396 | None:intergenic | 25.0% |
| !!! | TCTAGAAAAGCATTTATAAG+TGG | - | chr1_4:51368378-51368397 | None:intergenic | 25.0% |
| ! | TAATTACTGTTCTATAGTGT+AGG | + | chr1_4:51368617-51368636 | Msa0168580:intron | 25.0% |
| !!! | TTTTTTCATTTGTATTGGTG+GGG | + | chr1_4:51368974-51368993 | Msa0168580:intron | 25.0% |
| !! | CAGAAAATTTTCTTTGCAAA+TGG | + | chr1_4:51369217-51369236 | Msa0168580:intron | 25.0% |
| ! | GTGTTAGTAAATACATTTGA+AGG | + | chr1_4:51369314-51369333 | Msa0168580:intron | 25.0% |
| ! | TAATAGTCACTAATTCTAAC+AGG | + | chr1_4:51369397-51369416 | Msa0168580:intron | 25.0% |
| !!! | CAAGTTAGTTGTTTTTGTAA+TGG | + | chr1_4:51369562-51369581 | Msa0168580:intron | 25.0% |
| !!! | TGGAATTTAGTTTTCTTGTA+AGG | - | chr1_4:51369745-51369764 | None:intergenic | 25.0% |
| ! | CAGACATTTGTAAATTGTAT+GGG | - | chr1_4:51370152-51370171 | None:intergenic | 25.0% |
| ! | TCAGACATTTGTAAATTGTA+TGG | - | chr1_4:51370153-51370172 | None:intergenic | 25.0% |
| ! | ACAAAGTTATTGTTGATACA+AGG | + | chr1_4:51370273-51370292 | Msa0168580:intron | 25.0% |
| ! | AGCAGGAAAGATATTATTAT+TGG | - | chr1_4:51370402-51370421 | None:intergenic | 25.0% |
| ! | TAGGATAGTCTAATTATTAG+AGG | + | chr1_4:51370471-51370490 | Msa0168580:intron | 25.0% |
| ! | TTGTCATTAGACAAGATATA+TGG | + | chr1_4:51370555-51370574 | Msa0168580:intron | 25.0% |
| ! | AAATATCAAAGAAATAGCCA+CGG | - | chr1_4:51370805-51370824 | None:intergenic | 25.0% |
| ! | ATCTATTCCTGCAATTAAAA+AGG | - | chr1_4:51371073-51371092 | None:intergenic | 25.0% |
| ! | TATTAGAAAACTTCTTTCCT+AGG | - | chr1_4:51371432-51371451 | None:intergenic | 25.0% |
| ! | TTAACTGTCTTATCATACAA+TGG | - | chr1_4:51371472-51371491 | None:intergenic | 25.0% |
| !! | AATTGTCATTTCATCAGAAT+TGG | - | chr1_4:51371634-51371653 | None:intergenic | 25.0% |
| ! | TGACAATTTGTACTAACAAA+AGG | + | chr1_4:51371646-51371665 | Msa0168580:intron | 25.0% |
| ! | GACAATTTGTACTAACAAAA+GGG | + | chr1_4:51371647-51371666 | Msa0168580:intron | 25.0% |
| !! | AAAGAATGAAGGTATAACAA+CGG | - | chr1_4:51372262-51372281 | None:intergenic | 25.0% |
| ! | TTATCATGGAAGGAAAATAA+GGG | - | chr1_4:51372372-51372391 | None:intergenic | 25.0% |
| ! | ATTATCATGGAAGGAAAATA+AGG | - | chr1_4:51372373-51372392 | None:intergenic | 25.0% |
| ! | TATCAAAAAGACATCACAAA+TGG | - | chr1_4:51372471-51372490 | None:intergenic | 25.0% |
| ! | CTATTAGATTGTTGCAATAA+GGG | + | chr1_4:51372568-51372587 | Msa0168580:intron | 25.0% |
| ! | TATTAGATTGTTGCAATAAG+GGG | + | chr1_4:51372569-51372588 | Msa0168580:intron | 25.0% |
| !!! | TTATTTTTCATGACTGTATC+GGG | - | chr1_4:51372788-51372807 | None:intergenic | 25.0% |
| ! | AATAAATGTTCATCAGAAAG+AGG | + | chr1_4:51372803-51372822 | Msa0168580:intron | 25.0% |
| ! | AGAACATGAAACACATATTA+AGG | - | chr1_4:51372887-51372906 | None:intergenic | 25.0% |
| ! | ATAGAACATGAAACACATTA+AGG | - | chr1_4:51372929-51372948 | None:intergenic | 25.0% |
| !!! | ACTTTAACTTTTCTAGCATT+TGG | + | chr1_4:51372970-51372989 | Msa0168580:intron | 25.0% |
| ! | TCCTAAATATACTTTGATGA+TGG | + | chr1_4:51373205-51373224 | Msa0168580:intron | 25.0% |
| ! | TATTAAAGAGAATAAGCAGT+TGG | + | chr1_4:51373333-51373352 | Msa0168580:intron | 25.0% |
| ! | ATTAAAGAGAATAAGCAGTT+GGG | + | chr1_4:51373334-51373353 | Msa0168580:intron | 25.0% |
| !! | TTACGTTTTCTTTTCATGTA+TGG | + | chr1_4:51373516-51373535 | Msa0168580:intron | 25.0% |
| ! | TCAGGCATTTAAAAATGTAT+TGG | + | chr1_4:51373540-51373559 | Msa0168580:intron | 25.0% |
| ! | AAATGTATTGGACAAATTTG+TGG | + | chr1_4:51373552-51373571 | Msa0168580:CDS | 25.0% |
| ! | AATGTATTGGACAAATTTGT+GGG | + | chr1_4:51373553-51373572 | Msa0168580:CDS | 25.0% |
| ! | AGTGAACTTTATGAATGAAT+TGG | + | chr1_4:51373620-51373639 | Msa0168580:three_prime_UTR | 25.0% |
| ! | TTCAGTGTATCAAATACATA+GGG | - | chr1_4:51373816-51373835 | None:intergenic | 25.0% |
| ! | ATTCAGTGTATCAAATACAT+AGG | - | chr1_4:51373817-51373836 | None:intergenic | 25.0% |
| ! | TCAGGAAAATATTAAATGGT+GGG | - | chr1_4:51373882-51373901 | None:intergenic | 25.0% |
| ! | TTCAGGAAAATATTAAATGG+TGG | - | chr1_4:51373883-51373902 | None:intergenic | 25.0% |
| ! | TAGTTTAGCTAGTTCAAATT+GGG | - | chr1_4:51373917-51373936 | None:intergenic | 25.0% |
| ! | TAGTTTAGCTAGTTCAAATT+GGG | - | chr1_4:51373917-51373936 | None:intergenic | 25.0% |
| ! | GTACAAGACATAATTATACA+TGG | - | chr1_4:51373992-51374011 | None:intergenic | 25.0% |
| ! | GAAGAACAATTTTCCAATGT+TGG | + | chr1_4:51364571-51364590 | Msa0168580:five_prime_UTR | 30.0% |
| AATTTCAGATTTCACAAGAG+AGG | - | chr1_4:51364632-51364651 | None:intergenic | 30.0% | |
| ! | TTTGATCGTTTGAAGTTTGA+AGG | - | chr1_4:51364666-51364685 | None:intergenic | 30.0% |
| AACTTCAAACGATCAAAGTA+TGG | + | chr1_4:51364669-51364688 | Msa0168580:exon | 30.0% | |
| ! | TGTTGTTTGATTGATTACAG+CGG | - | chr1_4:51364776-51364795 | None:intergenic | 30.0% |
| TAACCTAAAAAGGTTCTATG+CGG | + | chr1_4:51364868-51364887 | Msa0168580:intron | 30.0% | |
| ! | CGCTTTTCATATAAGTGTTT+CGG | + | chr1_4:51365105-51365124 | Msa0168580:intron | 30.0% |
| AAGCATGTTTGACAATGTTT+GGG | - | chr1_4:51365279-51365298 | None:intergenic | 30.0% | |
| TAAGCATGTTTGACAATGTT+TGG | - | chr1_4:51365280-51365299 | None:intergenic | 30.0% | |
| TTATTGTAAGCTATATCGGA+GGG | + | chr1_4:51365408-51365427 | Msa0168580:intron | 30.0% | |
| !! | CGTTTTCGTAAGTTGAAATA+AGG | + | chr1_4:51365475-51365494 | Msa0168580:intron | 30.0% |
| TTATGTGATATGGGATTATG+TGG | + | chr1_4:51365517-51365536 | Msa0168580:intron | 30.0% | |
| !! | TCCTTGATTTGTGTAAGAAA+CGG | + | chr1_4:51365607-51365626 | Msa0168580:CDS | 30.0% |
| ! | TGCGCTAAATAAATTTGTTC+GGG | - | chr1_4:51365738-51365757 | None:intergenic | 30.0% |
| ! | CTGCGCTAAATAAATTTGTT+CGG | - | chr1_4:51365739-51365758 | None:intergenic | 30.0% |
| ! | TGAGATAGGTTATTTCACAT+TGG | - | chr1_4:51365773-51365792 | None:intergenic | 30.0% |
| GTGAAATAACCTATCTCAAT+TGG | + | chr1_4:51365775-51365794 | Msa0168580:intron | 30.0% | |
| TTTGATGAACCAATTGAGAT+AGG | - | chr1_4:51365787-51365806 | None:intergenic | 30.0% | |
| CAAAATATCAATTTAGTGCG+TGG | - | chr1_4:51365908-51365927 | None:intergenic | 30.0% | |
| TTACGATTACTGTTCATGAT+CGG | - | chr1_4:51366007-51366026 | None:intergenic | 30.0% | |
| !!! | CTACTTTGTTTTGTAGTCTA+TGG | + | chr1_4:51366089-51366108 | Msa0168580:intron | 30.0% |
| ! | TCTTTTGATCCTAAAAATGG+AGG | - | chr1_4:51366196-51366215 | None:intergenic | 30.0% |
| AAACTATGCACAAAAGATTG+TGG | - | chr1_4:51366285-51366304 | None:intergenic | 30.0% | |
| ! | AATCTTTTGTGCATAGTTTC+TGG | + | chr1_4:51366286-51366305 | Msa0168580:CDS | 30.0% |
| ! | CATATAACTTACCTTGTTTG+AGG | - | chr1_4:51366312-51366331 | None:intergenic | 30.0% |
| TAATAGGTCATAACAAGAAG+AGG | - | chr1_4:51366339-51366358 | None:intergenic | 30.0% | |
| TAATATGCTATCAACTGTGT+AGG | + | chr1_4:51366424-51366443 | Msa0168580:intron | 30.0% | |
| ! | GGAATTTTCAGTACTTGTTT+TGG | + | chr1_4:51366445-51366464 | Msa0168580:intron | 30.0% |
| !! | TAAATGACAGAAATGGATTG+AGG | - | chr1_4:51366658-51366677 | None:intergenic | 30.0% |
| !! | GAAATTTTGCAGTTGTTTTG+TGG | + | chr1_4:51366686-51366705 | Msa0168580:intron | 30.0% |
| TTGGATAAATTGAGTAATCG+GGG | - | chr1_4:51366974-51366993 | None:intergenic | 30.0% | |
| CTTGGATAAATTGAGTAATC+GGG | - | chr1_4:51366975-51366994 | None:intergenic | 30.0% | |
| CCTTGGATAAATTGAGTAAT+CGG | - | chr1_4:51366976-51366995 | None:intergenic | 30.0% | |
| CGATTACTCAATTTATCCAA+GGG | + | chr1_4:51366974-51366993 | Msa0168580:CDS | 30.0% | |
| ! | TAACTTCTCTGATTGTTTTC+TGG | + | chr1_4:51367189-51367208 | Msa0168580:intron | 30.0% |
| ! | AACTTCTCTGATTGTTTTCT+GGG | + | chr1_4:51367190-51367209 | Msa0168580:intron | 30.0% |
| !! | TTCTGTACTGGTTAAATATC+TGG | + | chr1_4:51367215-51367234 | Msa0168580:intron | 30.0% |
| TCAATGTTCACACTTATTGA+AGG | + | chr1_4:51367243-51367262 | Msa0168580:intron | 30.0% | |
| ACAGCTCATAATTAGATAAC+TGG | + | chr1_4:51367267-51367286 | Msa0168580:intron | 30.0% | |
| CAAGAATTGTTAGCAATTGT+AGG | - | chr1_4:51367805-51367824 | None:intergenic | 30.0% | |
| ATGACATAATGCGAAGATAT+AGG | - | chr1_4:51367839-51367858 | None:intergenic | 30.0% | |
| ! | TCATGGTCCTTTTCATTTAT+TGG | + | chr1_4:51367878-51367897 | Msa0168580:intron | 30.0% |
| CCAACAACCAATAAATGAAA+AGG | - | chr1_4:51367888-51367907 | None:intergenic | 30.0% | |
| !! | CCTTTTCATTTATTGGTTGT+TGG | + | chr1_4:51367885-51367904 | Msa0168580:intron | 30.0% |
| AAGAAAGATCTATACTCTCA+TGG | - | chr1_4:51367967-51367986 | None:intergenic | 30.0% | |
| AGAGTATAGATCTTTCTTGA+AGG | + | chr1_4:51367969-51367988 | Msa0168580:intron | 30.0% | |
| AAATGTATATGCTCAAGCAA+CGG | - | chr1_4:51368073-51368092 | None:intergenic | 30.0% | |
| TCTTCTCTTTGAATTTGAGT+TGG | + | chr1_4:51368103-51368122 | Msa0168580:intron | 30.0% | |
| ! | CTTCTCTTTGAATTTGAGTT+GGG | + | chr1_4:51368104-51368123 | Msa0168580:intron | 30.0% |
| AAAATGTGTTTATAAGTGGG+AGG | - | chr1_4:51368172-51368191 | None:intergenic | 30.0% | |
| CCTGAAAATGTGTTTATAAG+TGG | - | chr1_4:51368176-51368195 | None:intergenic | 30.0% | |
| ! | CCACTTATAAACACATTTTC+AGG | + | chr1_4:51368173-51368192 | Msa0168580:intron | 30.0% |
| GAGTTTATCCAAGATTCATT+GGG | - | chr1_4:51368290-51368309 | None:intergenic | 30.0% | |
| TCCTATACCATCTTAGAATT+TGG | + | chr1_4:51368308-51368327 | Msa0168580:intron | 30.0% | |
| CCTATACCATCTTAGAATTT+GGG | + | chr1_4:51368309-51368328 | Msa0168580:intron | 30.0% | |
| TAACTCAACCCTACAAAATA+GGG | + | chr1_4:51368339-51368358 | Msa0168580:intron | 30.0% | |
| ! | ATCTTTCACCCTATTTTGTA+GGG | - | chr1_4:51368350-51368369 | None:intergenic | 30.0% |
| ATAGATCCTACTGCAAAATA+CGG | - | chr1_4:51368473-51368492 | None:intergenic | 30.0% | |
| TGTAATGAATATGCGAACTA+GGG | - | chr1_4:51368527-51368546 | None:intergenic | 30.0% | |
| TTGTAATGAATATGCGAACT+AGG | - | chr1_4:51368528-51368547 | None:intergenic | 30.0% | |
| TAAAATCGTCACTATCTACT+TGG | - | chr1_4:51368648-51368667 | None:intergenic | 30.0% | |
| !! | CTATTGCTATTAACTTTTGG+TGG | + | chr1_4:51368668-51368687 | Msa0168580:CDS | 30.0% |
| ATTTACGCAGAATATTGAGA+AGG | + | chr1_4:51368737-51368756 | Msa0168580:CDS | 30.0% | |
| CTAACACCATTACAAATACA+AGG | - | chr1_4:51369301-51369320 | None:intergenic | 30.0% | |
| TTTAAGAATCCGTACAATCA+AGG | + | chr1_4:51369356-51369375 | Msa0168580:intron | 30.0% | |
| GTTAGTATTCCTTGATTGTA+CGG | - | chr1_4:51369368-51369387 | None:intergenic | 30.0% | |
| TTAACTCGATGAACTTTGAT+AGG | - | chr1_4:51369516-51369535 | None:intergenic | 30.0% | |
| ! | ATATTGAAAAGGCATGTCAT+CGG | - | chr1_4:51369589-51369608 | None:intergenic | 30.0% |
| ! | ATGACATGCCTTTTCAATAT+AGG | + | chr1_4:51369589-51369608 | Msa0168580:intron | 30.0% |
| AAAATTGATTAGACCGTCAA+TGG | - | chr1_4:51369781-51369800 | None:intergenic | 30.0% | |
| ! | GTTGAAAGGAATGGATTTAA+AGG | + | chr1_4:51369846-51369865 | Msa0168580:CDS | 30.0% |
| AAAGGAGAAAAGACTTAAAG+AGG | + | chr1_4:51369864-51369883 | Msa0168580:CDS | 30.0% | |
| AAGGAGAAAAGACTTAAAGA+GGG | + | chr1_4:51369865-51369884 | Msa0168580:CDS | 30.0% | |
| ! | TTTGACATTCCAGAGAATTT+TGG | - | chr1_4:51370079-51370098 | None:intergenic | 30.0% |
| !! | AAGACATTTTGAAGAGTTTG+TGG | - | chr1_4:51370102-51370121 | None:intergenic | 30.0% |
| TCAAAATGTCTTTCTTGCTA+TGG | + | chr1_4:51370110-51370129 | Msa0168580:CDS | 30.0% | |
| TTTGTACTTGATCATATCGA+TGG | + | chr1_4:51370298-51370317 | Msa0168580:intron | 30.0% | |
| AATGTATTTGTCAACTTGCA+AGG | - | chr1_4:51370331-51370350 | None:intergenic | 30.0% | |
| TAATATCTTTCCTGCTTGAA+AGG | + | chr1_4:51370406-51370425 | Msa0168580:intron | 30.0% | |
| AATATCTTTCCTGCTTGAAA+GGG | + | chr1_4:51370407-51370426 | Msa0168580:intron | 30.0% | |
| AAAGTGAGTAGATCATATGT+AGG | + | chr1_4:51370452-51370471 | Msa0168580:intron | 30.0% | |
| AGTCTAATTATTAGAGGTAG+AGG | + | chr1_4:51370477-51370496 | Msa0168580:intron | 30.0% | |
| GTCTAATTATTAGAGGTAGA+GGG | + | chr1_4:51370478-51370497 | Msa0168580:intron | 30.0% | |
| CATTAGACAAGATATATGGT+AGG | + | chr1_4:51370559-51370578 | Msa0168580:intron | 30.0% | |
| !! | AAGGTGTTATTGTCGTTAAA+AGG | + | chr1_4:51370637-51370656 | Msa0168580:intron | 30.0% |
| !! | AGGTGTTATTGTCGTTAAAA+GGG | + | chr1_4:51370638-51370657 | Msa0168580:intron | 30.0% |
| ! | TCACTTCTAAAGAATAAAGG+AGG | - | chr1_4:51370682-51370701 | None:intergenic | 30.0% |
| ! | GCATCACTTCTAAAGAATAA+AGG | - | chr1_4:51370685-51370704 | None:intergenic | 30.0% |
| ! | TATTCTTTAGAAGTGATGCT+TGG | + | chr1_4:51370686-51370705 | Msa0168580:intron | 30.0% |
| ! | ATTCTTTAGAAGTGATGCTT+GGG | + | chr1_4:51370687-51370706 | Msa0168580:intron | 30.0% |
| AACTAACTATTGAGGAAGAT+CGG | + | chr1_4:51370968-51370987 | Msa0168580:CDS | 30.0% | |
| TCATAAGTGTTTCATGTGAT+TGG | + | chr1_4:51371013-51371032 | Msa0168580:intron | 30.0% | |
| AGCAATGAATTCTATTCTGA+AGG | + | chr1_4:51371133-51371152 | Msa0168580:CDS | 30.0% | |
| GCAATGAATTCTATTCTGAA+GGG | + | chr1_4:51371134-51371153 | Msa0168580:CDS | 30.0% | |
| ! | CAATGAATTCTATTCTGAAG+GGG | + | chr1_4:51371135-51371154 | Msa0168580:CDS | 30.0% |
| ! | TTAATAGGTTGGAGATTCAA+GGG | - | chr1_4:51371290-51371309 | None:intergenic | 30.0% |
| !!! | AAAGTTTTGGGTTAATAGGT+TGG | - | chr1_4:51371301-51371320 | None:intergenic | 30.0% |
| !!! | CAGAAAAGTTTTGGGTTAAT+AGG | - | chr1_4:51371305-51371324 | None:intergenic | 30.0% |
| !! | TCTGCATAAGTTCTAAAACA+AGG | + | chr1_4:51371557-51371576 | Msa0168580:intron | 30.0% |
| TTTCATCAGAATTGGAAAAC+TGG | - | chr1_4:51371626-51371645 | None:intergenic | 30.0% | |
| AATGCACACGGAATTTATAT+CGG | + | chr1_4:51371706-51371725 | Msa0168580:intron | 30.0% | |
| AAACTCCGAACACAATTAAT+TGG | + | chr1_4:51371759-51371778 | Msa0168580:intron | 30.0% | |
| AAGCTGAATCAATGTTGAAA+TGG | + | chr1_4:51371966-51371985 | Msa0168580:intron | 30.0% | |
| !! | TGTCTTGAATTTGCTATCAA+TGG | + | chr1_4:51372000-51372019 | Msa0168580:intron | 30.0% |
| ACTAGAAAATAGAGTGACTA+TGG | + | chr1_4:51372036-51372055 | Msa0168580:intron | 30.0% | |
| GGAAAAGAATTGGATAGTAA+CGG | - | chr1_4:51372130-51372149 | None:intergenic | 30.0% | |
| TATCATGGAAGGAAAATAAG+GGG | - | chr1_4:51372371-51372390 | None:intergenic | 30.0% | |
| AAAAGACATCACAAATGGTA+TGG | - | chr1_4:51372466-51372485 | None:intergenic | 30.0% | |
| GCTATTAGATTGTTGCAATA+AGG | + | chr1_4:51372567-51372586 | Msa0168580:intron | 30.0% | |
| ATTAGATTGTTGCAATAAGG+GGG | + | chr1_4:51372570-51372589 | Msa0168580:intron | 30.0% | |
| ! | TATTTTTCATGACTGTATCG+GGG | - | chr1_4:51372787-51372806 | None:intergenic | 30.0% |
| CCAAATAGTTATAGCATAGA+TGG | - | chr1_4:51372844-51372863 | None:intergenic | 30.0% | |
| CCATCTATGCTATAACTATT+TGG | + | chr1_4:51372841-51372860 | Msa0168580:intron | 30.0% | |
| GCCATCATCAAAGTATATTT+AGG | - | chr1_4:51373209-51373228 | None:intergenic | 30.0% | |
| ! | GTTCACACTTTAGAAGTATA+TGG | + | chr1_4:51373464-51373483 | Msa0168580:intron | 30.0% |
| ! | TTTCTTTTCATGTATGGTTC+AGG | + | chr1_4:51373522-51373541 | Msa0168580:intron | 30.0% |
| AACAGTTGTTAGTGTTGTAT+AGG | + | chr1_4:51373765-51373784 | Msa0168580:three_prime_UTR | 30.0% | |
| TCAGTGTATCAAATACATAG+GGG | - | chr1_4:51373815-51373834 | None:intergenic | 30.0% | |
| CAGGAAAATATTAAATGGTG+GGG | - | chr1_4:51373881-51373900 | None:intergenic | 30.0% | |
| CTAGTTTAGCTAGTTCAAAT+TGG | - | chr1_4:51373918-51373937 | None:intergenic | 30.0% | |
| CTAGTTTAGCTAGTTCAAAT+TGG | - | chr1_4:51373918-51373937 | None:intergenic | 30.0% | |
| ! | TGTCTTGTACATTGATTAGT+TGG | + | chr1_4:51374002-51374021 | Msa0168580:three_prime_UTR | 30.0% |
| AAACGATCAAAGTATGGAAG+AGG | + | chr1_4:51364675-51364694 | Msa0168580:exon | 35.0% | |
| AACGATCAAAGTATGGAAGA+GGG | + | chr1_4:51364676-51364695 | Msa0168580:exon | 35.0% | |
| TAGGAAGTTCTTCGTATCTT+CGG | - | chr1_4:51364711-51364730 | None:intergenic | 35.0% | |
| GTTGTTTGATTGATTACAGC+GGG | - | chr1_4:51364775-51364794 | None:intergenic | 35.0% | |
| CTTTCTCTTTATGGAATCCA+CGG | + | chr1_4:51364911-51364930 | Msa0168580:CDS | 35.0% | |
| AGTTGTTTATCCAAACAGAC+AGG | - | chr1_4:51365131-51365150 | None:intergenic | 35.0% | |
| GTTATTGTAAGCTATATCGG+AGG | + | chr1_4:51365407-51365426 | Msa0168580:intron | 35.0% | |
| AGGAAAGTAGAAAATGGTAG+AGG | - | chr1_4:51365591-51365610 | None:intergenic | 35.0% | |
| TCCGTTTCTTACACAAATCA+AGG | - | chr1_4:51365611-51365630 | None:intergenic | 35.0% | |
| CGAACAAATTTATTTAGCGC+AGG | + | chr1_4:51365737-51365756 | Msa0168580:CDS | 35.0% | |
| ATATCAATTTAGTGCGTGGA+TGG | - | chr1_4:51365904-51365923 | None:intergenic | 35.0% | |
| GATCATGAACAGTAATCGTA+AGG | + | chr1_4:51366006-51366025 | Msa0168580:CDS | 35.0% | |
| TCGTAAGGAGAAAGTTCAAT+TGG | + | chr1_4:51366021-51366040 | Msa0168580:CDS | 35.0% | |
| CGTAAGGAGAAAGTTCAATT+GGG | + | chr1_4:51366022-51366041 | Msa0168580:CDS | 35.0% | |
| TTCTGCAAAAAATCCTTTCC+AGG | + | chr1_4:51366577-51366596 | Msa0168580:intron | 35.0% | |
| TCTGCAAAAAATCCTTTCCA+GGG | + | chr1_4:51366578-51366597 | Msa0168580:intron | 35.0% | |
| GAATAAGTAACTGAAAACCC+TGG | - | chr1_4:51366598-51366617 | None:intergenic | 35.0% | |
| CATGTTCAGTTCTCAAAACA+TGG | + | chr1_4:51366858-51366877 | Msa0168580:intron | 35.0% | |
| CCGATTACTCAATTTATCCA+AGG | + | chr1_4:51366973-51366992 | Msa0168580:CDS | 35.0% | |
| CTTAATGGAGTTTGGACAAA+AGG | + | chr1_4:51367004-51367023 | Msa0168580:CDS | 35.0% | |
| ! | TGATAAGCCTTTCTGTTTCT+GGG | + | chr1_4:51367099-51367118 | Msa0168580:intron | 35.0% |
| TAATCTACCCAGAAACAGAA+AGG | - | chr1_4:51367109-51367128 | None:intergenic | 35.0% | |
| !!! | TTGTTTGGTGCTTTTGATGA+AGG | + | chr1_4:51367635-51367654 | Msa0168580:intron | 35.0% |
| AAGGTGATTGATATGTGCAT+TGG | + | chr1_4:51367654-51367673 | Msa0168580:intron | 35.0% | |
| AATAAATGCTTACAAGCCTG+AGG | + | chr1_4:51367770-51367789 | Msa0168580:intron | 35.0% | |
| ATAAATGCTTACAAGCCTGA+GGG | + | chr1_4:51367771-51367790 | Msa0168580:intron | 35.0% | |
| TCTAACTCAACCTTACGAAA+CGG | + | chr1_4:51368127-51368146 | Msa0168580:intron | 35.0% | |
| GGAGTTTATCCAAGATTCAT+TGG | - | chr1_4:51368291-51368310 | None:intergenic | 35.0% | |
| !! | CCCAAATTCTAAGATGGTAT+AGG | - | chr1_4:51368312-51368331 | None:intergenic | 35.0% |
| ! | GTTCAACCCAAATTCTAAGA+TGG | - | chr1_4:51368318-51368337 | None:intergenic | 35.0% |
| ! | CTATTTTGTAGGGTTGAGTT+AGG | - | chr1_4:51368340-51368359 | None:intergenic | 35.0% |
| CTAACTCAACCCTACAAAAT+AGG | + | chr1_4:51368338-51368357 | Msa0168580:intron | 35.0% | |
| ! | CATCTTTCACCCTATTTTGT+AGG | - | chr1_4:51368351-51368370 | None:intergenic | 35.0% |
| ! | AAGGTTGATTGACAAAGAGA+TGG | + | chr1_4:51368890-51368909 | Msa0168580:intron | 35.0% |
| ATTACAAATACAAGGTGGTG+TGG | - | chr1_4:51369293-51369312 | None:intergenic | 35.0% | |
| ACACCACCTTGTATTTGTAA+TGG | + | chr1_4:51369292-51369311 | Msa0168580:intron | 35.0% | |
| ACACCATTACAAATACAAGG+TGG | - | chr1_4:51369298-51369317 | None:intergenic | 35.0% | |
| ! | ACAACTAACTTGTGAGCATA+AGG | - | chr1_4:51369554-51369573 | None:intergenic | 35.0% |
| ! | ATGCCTTTTCAATATAGGAC+AGG | + | chr1_4:51369594-51369613 | Msa0168580:intron | 35.0% |
| TCAATGGAGAAATGATAAGC+TGG | - | chr1_4:51369765-51369784 | None:intergenic | 35.0% | |
| GCTTATCATTTCTCCATTGA+CGG | + | chr1_4:51369765-51369784 | Msa0168580:intron | 35.0% | |
| AATTGCAGTCAGATGTTGAA+AGG | + | chr1_4:51369832-51369851 | Msa0168580:CDS | 35.0% | |
| AGGAGAAAAGACTTAAAGAG+GGG | + | chr1_4:51369866-51369885 | Msa0168580:CDS | 35.0% | |
| ATGATCTACTCACTTTACGT+AGG | - | chr1_4:51370448-51370467 | None:intergenic | 35.0% | |
| ! | GTTGAGCCAACAATTTTCAT+TGG | - | chr1_4:51370507-51370526 | None:intergenic | 35.0% |
| AGATATATGGTAGGACATTG+TGG | + | chr1_4:51370568-51370587 | Msa0168580:intron | 35.0% | |
| ! | TATGACTGATTCCAACTAGT+GGG | + | chr1_4:51370612-51370631 | Msa0168580:intron | 35.0% |
| TACACGGAAATTTGATGAGA+TGG | + | chr1_4:51370942-51370961 | Msa0168580:CDS | 35.0% | |
| GATGGATGAACTAACTATTG+AGG | + | chr1_4:51370960-51370979 | Msa0168580:CDS | 35.0% | |
| ATTCACACAACAGGTAATTG+AGG | + | chr1_4:51371166-51371185 | Msa0168580:intron | 35.0% | |
| !!! | TGTGCTCTAGCTTTATCTTT+TGG | + | chr1_4:51371192-51371211 | Msa0168580:intron | 35.0% |
| TGTACTTAGAGTCACATGAA+GGG | + | chr1_4:51371251-51371270 | Msa0168580:intron | 35.0% | |
| ! | GTTAATAGGTTGGAGATTCA+AGG | - | chr1_4:51371291-51371310 | None:intergenic | 35.0% |
| ! | GTGAGAGTCAGAAAAGTTTT+GGG | - | chr1_4:51371313-51371332 | None:intergenic | 35.0% |
| ! | AGTGAGAGTCAGAAAAGTTT+TGG | - | chr1_4:51371314-51371333 | None:intergenic | 35.0% |
| !! | AAGCAACATGAATTTGCTGA+TGG | + | chr1_4:51371396-51371415 | Msa0168580:intron | 35.0% |
| TACAATGGAAAACAGTTCGA+GGG | - | chr1_4:51371457-51371476 | None:intergenic | 35.0% | |
| ATACAATGGAAAACAGTTCG+AGG | - | chr1_4:51371458-51371477 | None:intergenic | 35.0% | |
| ATGCACACGGAATTTATATC+GGG | + | chr1_4:51371707-51371726 | Msa0168580:intron | 35.0% | |
| CCAATACAAAGAATGCTTCA+GGG | - | chr1_4:51371831-51371850 | None:intergenic | 35.0% | |
| TCCAATACAAAGAATGCTTC+AGG | - | chr1_4:51371832-51371851 | None:intergenic | 35.0% | |
| ! | GAAGCATTCTTTGTATTGGA+CGG | + | chr1_4:51371832-51371851 | Msa0168580:intron | 35.0% |
| !! | GAACATTGTAAGGTATTGCA+CGG | - | chr1_4:51371863-51371882 | None:intergenic | 35.0% |
| CTAGGACAAAGAACATTGTA+AGG | - | chr1_4:51371873-51371892 | None:intergenic | 35.0% | |
| CAATGTTCTTTGTCCTAGAT+AGG | + | chr1_4:51371875-51371894 | Msa0168580:intron | 35.0% | |
| TTTATTACGTGTTAGCTGAG+AGG | - | chr1_4:51371926-51371945 | None:intergenic | 35.0% | |
| CAATGTTGAAATGGAGATGA+TGG | + | chr1_4:51371975-51371994 | Msa0168580:intron | 35.0% | |
| !! | AGTCACTCTATTTTCTAGTG+AGG | - | chr1_4:51372035-51372054 | None:intergenic | 35.0% |
| !! | TGAAGGTTGTTTTCTCCATA+GGG | - | chr1_4:51372091-51372110 | None:intergenic | 35.0% |
| CAAGGATATGCAAAGAATGA+AGG | - | chr1_4:51372273-51372292 | None:intergenic | 35.0% | |
| CATTCTTTGCATATCCTTGT+AGG | + | chr1_4:51372274-51372293 | Msa0168580:intron | 35.0% | |
| ATCATGGAAGGAAAATAAGG+GGG | - | chr1_4:51372370-51372389 | None:intergenic | 35.0% | |
| ATCAAAATTTCCACTTGCCT+TGG | + | chr1_4:51372431-51372450 | Msa0168580:intron | 35.0% | |
| GTTCATCCATGATATCACTT+CGG | - | chr1_4:51372712-51372731 | None:intergenic | 35.0% | |
| AAGTGATATCATGGATGAAC+CGG | + | chr1_4:51372712-51372731 | Msa0168580:intron | 35.0% | |
| AGAATAAGCAGTTGGGTTAT+TGG | + | chr1_4:51373341-51373360 | Msa0168580:intron | 35.0% | |
| GAATAAGCAGTTGGGTTATT+GGG | + | chr1_4:51373342-51373361 | Msa0168580:intron | 35.0% | |
| TGCATCAATTTATTCTTCGG+AGG | - | chr1_4:51373658-51373677 | None:intergenic | 35.0% | |
| ! | AAACCAAAGCATTTCTTCGT+TGG | + | chr1_4:51373684-51373703 | Msa0168580:three_prime_UTR | 35.0% |
| TATCAAATACATAGGGGCTA+GGG | - | chr1_4:51373809-51373828 | None:intergenic | 35.0% | |
| ! | ATTGGGAGCTTCTTTATTTC+AGG | - | chr1_4:51373900-51373919 | None:intergenic | 35.0% |
| CGATGTATCATGACGATTAG+TGG | - | chr1_4:51364493-51364512 | None:intergenic | 40.0% | |
| GACTGAGAGTTAATTGTCGT+GGG | + | chr1_4:51364518-51364537 | Msa0168580:five_prime_UTR | 40.0% | |
| ACTGAGAGTTAATTGTCGTG+GGG | + | chr1_4:51364519-51364538 | Msa0168580:five_prime_UTR | 40.0% | |
| ! | CAACCGCATAGAACCTTTTT+AGG | - | chr1_4:51364874-51364893 | None:intergenic | 40.0% |
| ! | AGAGAAAGCTCTCCAAGTTT+TGG | - | chr1_4:51364899-51364918 | None:intergenic | 40.0% |
| CTTGGAGAGCTTTCTCTTTA+TGG | + | chr1_4:51364902-51364921 | Msa0168580:CDS | 40.0% | |
| TAATCTAAACCATCGTTCCG+TGG | - | chr1_4:51364931-51364950 | None:intergenic | 40.0% | |
| CGATGGTTTAGATTACTTGC+AGG | + | chr1_4:51364936-51364955 | Msa0168580:CDS | 40.0% | |
| GTTTAGATTACTTGCAGGCA+CGG | + | chr1_4:51364941-51364960 | Msa0168580:CDS | 40.0% | |
| TTTAGATTACTTGCAGGCAC+GGG | + | chr1_4:51364942-51364961 | Msa0168580:CDS | 40.0% | |
| CCAAGATCACCATAAAAGAC+AGG | - | chr1_4:51365009-51365028 | None:intergenic | 40.0% | |
| ! | CCTGTCTTTTATGGTGATCT+TGG | + | chr1_4:51365006-51365025 | Msa0168580:intron | 40.0% |
| TGATCTTGGAAGTCATCACA+GGG | + | chr1_4:51365020-51365039 | Msa0168580:intron | 40.0% | |
| AAGCTATATCGGAGGGTTTA+TGG | + | chr1_4:51365415-51365434 | Msa0168580:intron | 40.0% | |
| ! | TGTTCTTTTCCTTGCATTGC+AGG | + | chr1_4:51365563-51365582 | Msa0168580:intron | 40.0% |
| AACTCAGCAACAACAACATC+TGG | + | chr1_4:51365641-51365660 | Msa0168580:CDS | 40.0% | |
| !! | TCATTGTGTTGCTTCGCAAA+CGG | + | chr1_4:51365674-51365693 | Msa0168580:CDS | 40.0% |
| AAGTTCAATTGGGAACCCTA+AGG | + | chr1_4:51366032-51366051 | Msa0168580:CDS | 40.0% | |
| AGTTCAATTGGGAACCCTAA+GGG | + | chr1_4:51366033-51366052 | Msa0168580:CDS | 40.0% | |
| !! | TCTCTTCAGCCTCCATTTTT+AGG | + | chr1_4:51366184-51366203 | Msa0168580:intron | 40.0% |
| ATGCACAAAAGATTGTGGTG+TGG | - | chr1_4:51366280-51366299 | None:intergenic | 40.0% | |
| !! | ATAGTTTCTGGCCTCAAACA+AGG | + | chr1_4:51366298-51366317 | Msa0168580:CDS | 40.0% |
| GAGGTAGTAGGTAGGATAAT+AGG | - | chr1_4:51366355-51366374 | None:intergenic | 40.0% | |
| !!! | GCAGAGTTTTGGAACTCTAT+TGG | + | chr1_4:51366526-51366545 | Msa0168580:intron | 40.0% |
| AGTAACTGAAAACCCTGGAA+AGG | - | chr1_4:51366593-51366612 | None:intergenic | 40.0% | |
| TCTACCCAATGCCTATCTAT+GGG | + | chr1_4:51366731-51366750 | Msa0168580:CDS | 40.0% | |
| CCATTGAGTATACCTGTGAT+TGG | - | chr1_4:51366764-51366783 | None:intergenic | 40.0% | |
| CCAATCACAGGTATACTCAA+TGG | + | chr1_4:51366761-51366780 | Msa0168580:intron | 40.0% | |
| GCAGAAGACTTAATGGAGTT+TGG | + | chr1_4:51366996-51367015 | Msa0168580:CDS | 40.0% | |
| GTTTGGACAAAAGGTTGTTC+TGG | + | chr1_4:51367013-51367032 | Msa0168580:CDS | 40.0% | |
| ! | GATGCACTTTTCATTCCTGA+AGG | + | chr1_4:51367044-51367063 | Msa0168580:CDS | 40.0% |
| ! | CACTTTTCATTCCTGAAGGA+TGG | + | chr1_4:51367048-51367067 | Msa0168580:CDS | 40.0% |
| TTCATTCCTGAAGGATGGTA+AGG | + | chr1_4:51367053-51367072 | Msa0168580:intron | 40.0% | |
| TATAGACCTTACCATCCTTC+AGG | - | chr1_4:51367062-51367081 | None:intergenic | 40.0% | |
| GTGATAAGCCTTTCTGTTTC+TGG | + | chr1_4:51367098-51367117 | Msa0168580:intron | 40.0% | |
| TCTTCCATATTTGGCAGACA+TGG | + | chr1_4:51367133-51367152 | Msa0168580:intron | 40.0% | |
| ATATTTGGCAGACATGGACA+GGG | + | chr1_4:51367139-51367158 | Msa0168580:intron | 40.0% | |
| !! | GTTTTCTGGGAATTCTGTAC+TGG | + | chr1_4:51367203-51367222 | Msa0168580:intron | 40.0% |
| AATCTAGTGCAGAACCTCTA+TGG | - | chr1_4:51367308-51367327 | None:intergenic | 40.0% | |
| TGTACGGTTAGACAGTTACA+GGG | - | chr1_4:51367336-51367355 | None:intergenic | 40.0% | |
| TTGTACGGTTAGACAGTTAC+AGG | - | chr1_4:51367337-51367356 | None:intergenic | 40.0% | |
| TAACTGTCTAACCGTACAAC+TGG | + | chr1_4:51367338-51367357 | Msa0168580:intron | 40.0% | |
| CGAAGATATAGGAGTGAAAC+AGG | - | chr1_4:51367828-51367847 | None:intergenic | 40.0% | |
| AATGAAAAGGACCATGATCC+TGG | - | chr1_4:51367875-51367894 | None:intergenic | 40.0% | |
| CCTTACAAAACCGTTTCGTA+AGG | - | chr1_4:51368140-51368159 | None:intergenic | 40.0% | |
| !! | CCTTACGAAACGGTTTTGTA+AGG | + | chr1_4:51368137-51368156 | Msa0168580:intron | 40.0% |
| AGGACATATCACATCCGATT+TGG | + | chr1_4:51368193-51368212 | Msa0168580:intron | 40.0% | |
| GGACATATCACATCCGATTT+GGG | + | chr1_4:51368194-51368213 | Msa0168580:intron | 40.0% | |
| ! | GACATATCACATCCGATTTG+GGG | + | chr1_4:51368195-51368214 | Msa0168580:intron | 40.0% |
| GTGTGATAAGATCCCCAAAT+CGG | - | chr1_4:51368210-51368229 | None:intergenic | 40.0% | |
| CAGGTAACACTTCGATATTC+AGG | - | chr1_4:51368248-51368267 | None:intergenic | 40.0% | |
| ! | ATATCGAAGTGTTACCTGAG+TGG | + | chr1_4:51368250-51368269 | Msa0168580:intron | 40.0% |
| CTGGATGTGATCATGTGATA+AGG | - | chr1_4:51368401-51368420 | None:intergenic | 40.0% | |
| TTGAGACTTGAGTCTCATAC+TGG | - | chr1_4:51368420-51368439 | None:intergenic | 40.0% | |
| TCCTACTGCAAAATACGGTT+GGG | - | chr1_4:51368468-51368487 | None:intergenic | 40.0% | |
| ATCCTACTGCAAAATACGGT+TGG | - | chr1_4:51368469-51368488 | None:intergenic | 40.0% | |
| AATCGTCACTATCTACTTGG+TGG | - | chr1_4:51368645-51368664 | None:intergenic | 40.0% | |
| CATCATGCAAGACATTGTGT+TGG | - | chr1_4:51368698-51368717 | None:intergenic | 40.0% | |
| CAACACAATGTCTTGCATGA+TGG | + | chr1_4:51368696-51368715 | Msa0168580:CDS | 40.0% | |
| ! | GTCTTGCATGATGGAACATA+TGG | + | chr1_4:51368705-51368724 | Msa0168580:CDS | 40.0% |
| CGCAGAATATTGAGAAGGTA+TGG | + | chr1_4:51368742-51368761 | Msa0168580:CDS | 40.0% | |
| TCATTTGCCTGTTGATCCAA+TGG | + | chr1_4:51368858-51368877 | Msa0168580:intron | 40.0% | |
| AATGCATCCATTGGATCAAC+AGG | - | chr1_4:51368868-51368887 | None:intergenic | 40.0% | |
| ! | TTCATTTGTATTGGTGGGGT+TGG | + | chr1_4:51368978-51368997 | Msa0168580:intron | 40.0% |
| CAAGAGAGAAAGGAACATCA+TGG | - | chr1_4:51369148-51369167 | None:intergenic | 40.0% | |
| ATGTTCCTTTCTCTCTTGTG+TGG | + | chr1_4:51369150-51369169 | Msa0168580:intron | 40.0% | |
| !! | TTGCAAATGGTTGATGAAGC+AGG | + | chr1_4:51369230-51369249 | Msa0168580:intron | 40.0% |
| TTGTTCCTGAGTGTGAAGAA+TGG | + | chr1_4:51369463-51369482 | Msa0168580:intron | 40.0% | |
| GGTCCTGTCCTATATTGAAA+AGG | - | chr1_4:51369600-51369619 | None:intergenic | 40.0% | |
| GACCAGCAACTGCTAAAATT+GGG | + | chr1_4:51369616-51369635 | Msa0168580:CDS | 40.0% | |
| ACCAGCAACTGCTAAAATTG+GGG | + | chr1_4:51369617-51369636 | Msa0168580:CDS | 40.0% | |
| CAACTGCTAAAATTGGGGAT+GGG | + | chr1_4:51369622-51369641 | Msa0168580:CDS | 40.0% | |
| AATTGGGGATGGGAAAAACT+AGG | + | chr1_4:51369632-51369651 | Msa0168580:CDS | 40.0% | |
| ! | CAATTTTCATCAGCGTGATC+TGG | - | chr1_4:51369817-51369836 | None:intergenic | 40.0% |
| CAGTCAGATGTTGAAAGGAA+TGG | + | chr1_4:51369837-51369856 | Msa0168580:CDS | 40.0% | |
| TTGACAGTGATTGTTGATCC+TGG | - | chr1_4:51369975-51369994 | None:intergenic | 40.0% | |
| ATCCAGTTGCCAAAATTCTC+TGG | + | chr1_4:51370067-51370086 | Msa0168580:CDS | 40.0% | |
| !! | TTCCAGAGAATTTTGGCAAC+TGG | - | chr1_4:51370072-51370091 | None:intergenic | 40.0% |
| CTTCTTTGTACTGTGAACCA+TGG | + | chr1_4:51370190-51370209 | Msa0168580:intron | 40.0% | |
| GGGAGACCAATGAAAATTGT+TGG | + | chr1_4:51370498-51370517 | Msa0168580:intron | 40.0% | |
| !! | TGTTGGCTCAACCATTAAGA+AGG | + | chr1_4:51370515-51370534 | Msa0168580:intron | 40.0% |
| ! | GTATGACTGATTCCAACTAG+TGG | + | chr1_4:51370611-51370630 | Msa0168580:intron | 40.0% |
| TGATTCCAACTAGTGGGAAA+AGG | + | chr1_4:51370618-51370637 | Msa0168580:intron | 40.0% | |
| ! | TAACACCTTTTCCCACTAGT+TGG | - | chr1_4:51370626-51370645 | None:intergenic | 40.0% |
| CCACGGCATGATTAAATACA+AGG | - | chr1_4:51370788-51370807 | None:intergenic | 40.0% | |
| CCTTGTATTTAATCATGCCG+TGG | + | chr1_4:51370785-51370804 | Msa0168580:intron | 40.0% | |
| CAACTTCCCAAGAACTTTAG+AGG | + | chr1_4:51370876-51370895 | Msa0168580:CDS | 40.0% | |
| TGCATGTACTATCACCAGTT+GGG | + | chr1_4:51370908-51370927 | Msa0168580:CDS | 40.0% | |
| !! | TTGGTCGCCTTTTTAATTGC+AGG | + | chr1_4:51371063-51371082 | Msa0168580:intron | 40.0% |
| TTGCAGGAATAGATTCTACG+AGG | + | chr1_4:51371079-51371098 | Msa0168580:intron | 40.0% | |
| ! | GAATTCTATTCTGAAGGGGA+AGG | + | chr1_4:51371139-51371158 | Msa0168580:CDS | 40.0% |
| TTCGTCCATATTTACCCTTC+TGG | + | chr1_4:51371224-51371243 | Msa0168580:intron | 40.0% | |
| ACACACCAGAAGGGTAAATA+TGG | - | chr1_4:51371232-51371251 | None:intergenic | 40.0% | |
| TCTAAGTACACACACCAGAA+GGG | - | chr1_4:51371241-51371260 | None:intergenic | 40.0% | |
| GTGTACTTAGAGTCACATGA+AGG | + | chr1_4:51371250-51371269 | Msa0168580:intron | 40.0% | |
| AAGGAAGAGAGAAATGCACA+CGG | + | chr1_4:51371694-51371713 | Msa0168580:intron | 40.0% | |
| ! | GGGTTCACTCACAAAAGTTT+TGG | + | chr1_4:51371727-51371746 | Msa0168580:intron | 40.0% |
| ! | CCCTGAAGCATTCTTTGTAT+TGG | + | chr1_4:51371828-51371847 | Msa0168580:intron | 40.0% |
| !! | GTGAAGGTTGTTTTCTCCAT+AGG | - | chr1_4:51372092-51372111 | None:intergenic | 40.0% |
| TTTGAGGGGAGGAAAAGAAT+TGG | - | chr1_4:51372140-51372159 | None:intergenic | 40.0% | |
| ATCAGTTCCATACAGTGGAA+AGG | - | chr1_4:51372173-51372192 | None:intergenic | 40.0% | |
| CAGAATGGGGAATAACAGAA+CGG | - | chr1_4:51372233-51372252 | None:intergenic | 40.0% | |
| AACAACGGCAACAACAGAAT+GGG | - | chr1_4:51372247-51372266 | None:intergenic | 40.0% | |
| TAACAACGGCAACAACAGAA+TGG | - | chr1_4:51372248-51372267 | None:intergenic | 40.0% | |
| AACATTGGGCCACAAAGAAT+GGG | - | chr1_4:51372300-51372319 | None:intergenic | 40.0% | |
| TGGTATGGTCAAGTATTCCA+AGG | - | chr1_4:51372451-51372470 | None:intergenic | 40.0% | |
| TTGAGTCCGAAGTGATATCA+TGG | + | chr1_4:51372703-51372722 | Msa0168580:intron | 40.0% | |
| AAAGTCTCAATGCACATGCA+GGG | - | chr1_4:51373298-51373317 | None:intergenic | 40.0% | |
| TAAAGTCTCAATGCACATGC+AGG | - | chr1_4:51373299-51373318 | None:intergenic | 40.0% | |
| ! | AATCTAGAATGCTCAAAGCC+AGG | + | chr1_4:51373580-51373599 | Msa0168580:CDS | 40.0% |
| ! | ATCTAGAATGCTCAAAGCCA+GGG | + | chr1_4:51373581-51373600 | Msa0168580:CDS | 40.0% |
| !! | TTTATTCTTCGGAGGTACCT+TGG | - | chr1_4:51373650-51373669 | None:intergenic | 40.0% |
| GATCCAACGAAGAAATGCTT+TGG | - | chr1_4:51373690-51373709 | None:intergenic | 40.0% | |
| GTATCAAATACATAGGGGCT+AGG | - | chr1_4:51373810-51373829 | None:intergenic | 40.0% | |
| CGACTGAGAGTTAATTGTCG+TGG | + | chr1_4:51364517-51364536 | Msa0168580:five_prime_UTR | 45.0% | |
| GACTCGAAGTCGTTAGATGT+AGG | - | chr1_4:51364730-51364749 | None:intergenic | 45.0% | |
| TATGCGGTTGCACCAAAACT+TGG | + | chr1_4:51364884-51364903 | Msa0168580:CDS | 45.0% | |
| TTATGGAATCCACGGAACGA+TGG | + | chr1_4:51364919-51364938 | Msa0168580:CDS | 45.0% | |
| ! | TCGTCTGCACCTGTCTTTTA+TGG | + | chr1_4:51364997-51365016 | Msa0168580:intron | 45.0% |
| GTGATCTTGGAAGTCATCAC+AGG | + | chr1_4:51365019-51365038 | Msa0168580:intron | 45.0% | |
| TCAGCAACAACAACATCTGG+AGG | + | chr1_4:51365644-51365663 | Msa0168580:CDS | 45.0% | |
| TTTAGTGCGTGGATGGAACA+AGG | - | chr1_4:51365897-51365916 | None:intergenic | 45.0% | |
| CGTCTGAATGTCTTCCCTTA+GGG | - | chr1_4:51366050-51366069 | None:intergenic | 45.0% | |
| CCTAAGGGAAGACATTCAGA+CGG | + | chr1_4:51366048-51366067 | Msa0168580:CDS | 45.0% | |
| GTGGTGAAAAAACCCATGCT+GGG | - | chr1_4:51366377-51366396 | None:intergenic | 45.0% | |
| AGTGGTGAAAAAACCCATGC+TGG | - | chr1_4:51366378-51366397 | None:intergenic | 45.0% | |
| TTTCACCACTGCAGAAATGC+AGG | + | chr1_4:51366388-51366407 | Msa0168580:intron | 45.0% | |
| GAGGAAGGAAAAGAAGGTAG+AGG | - | chr1_4:51366632-51366651 | None:intergenic | 45.0% | |
| AGGCTTGAGGAAGGAAAAGA+AGG | - | chr1_4:51366638-51366657 | None:intergenic | 45.0% | |
| !! | AATGGATTGAGGCTTGAGGA+AGG | - | chr1_4:51366647-51366666 | None:intergenic | 45.0% |
| !! | CAGAAATGGATTGAGGCTTG+AGG | - | chr1_4:51366651-51366670 | None:intergenic | 45.0% |
| !! | ATAGGCATTGGGTAGAGTGA+GGG | - | chr1_4:51366727-51366746 | None:intergenic | 45.0% |
| CTCTACCCAATGCCTATCTA+TGG | + | chr1_4:51366730-51366749 | Msa0168580:CDS | 45.0% | |
| CTACCCAATGCCTATCTATG+GGG | + | chr1_4:51366732-51366751 | Msa0168580:CDS | 45.0% | |
| CTTCCCCATAGATAGGCATT+GGG | - | chr1_4:51366738-51366757 | None:intergenic | 45.0% | |
| TTGGAAGCTTCCCCATAGAT+AGG | - | chr1_4:51366745-51366764 | None:intergenic | 45.0% | |
| TCCAAGGGCAGAAGACTTAA+TGG | + | chr1_4:51366989-51367008 | Msa0168580:CDS | 45.0% | |
| TCCATTAAGTCTTCTGCCCT+TGG | - | chr1_4:51366993-51367012 | None:intergenic | 45.0% | |
| TGGACAAAAGGTTGTTCTGG+AGG | + | chr1_4:51367016-51367035 | Msa0168580:CDS | 45.0% | |
| CTGTCCATGTCTGCCAAATA+TGG | - | chr1_4:51367140-51367159 | None:intergenic | 45.0% | |
| CATATTTGGCAGACATGGAC+AGG | + | chr1_4:51367138-51367157 | Msa0168580:intron | 45.0% | |
| AGACATGGACAGGGAAACTT+GGG | + | chr1_4:51367148-51367167 | Msa0168580:intron | 45.0% | |
| GATCAGCATGATCACCATAG+AGG | + | chr1_4:51367291-51367310 | Msa0168580:intron | 45.0% | |
| AATGGTGACTGACACACTAG+AGG | + | chr1_4:51367381-51367400 | Msa0168580:intron | 45.0% | |
| ACAGAGATGCAAAAGCTCTC+TGG | + | chr1_4:51367495-51367514 | Msa0168580:intron | 45.0% | |
| TTCTGTGTCAGCACAGCATT+GGG | - | chr1_4:51367566-51367585 | None:intergenic | 45.0% | |
| ATTCTGTGTCAGCACAGCAT+TGG | - | chr1_4:51367567-51367586 | None:intergenic | 45.0% | |
| ! | GTCATCTTTTCCTTGACTCC+AGG | + | chr1_4:51367854-51367873 | Msa0168580:intron | 45.0% |
| TTTCCTTGACTCCAGGATCA+TGG | + | chr1_4:51367861-51367880 | Msa0168580:intron | 45.0% | |
| ! | ATTCAGGTTTGAGCGTGAGA+GGG | - | chr1_4:51368232-51368251 | None:intergenic | 45.0% |
| ! | TATTCAGGTTTGAGCGTGAG+AGG | - | chr1_4:51368233-51368252 | None:intergenic | 45.0% |
| ACGAGTGACCCAATGAATCT+TGG | + | chr1_4:51368279-51368298 | Msa0168580:intron | 45.0% | |
| TACTGCAAAATACGGTTGGG+TGG | - | chr1_4:51368465-51368484 | None:intergenic | 45.0% | |
| ! | ACCCAACCGTATTTTGCAGT+AGG | + | chr1_4:51368464-51368483 | Msa0168580:intron | 45.0% |
| GATCCAATGGATGCATTCGA+AGG | + | chr1_4:51368871-51368890 | Msa0168580:intron | 45.0% | |
| CAACCTTCGAATGCATCCAT+TGG | - | chr1_4:51368877-51368896 | None:intergenic | 45.0% | |
| TGCTACCACACAAGAGAGAA+AGG | - | chr1_4:51369158-51369177 | None:intergenic | 45.0% | |
| TTCCTGAGTGTGAAGAATGG+AGG | + | chr1_4:51369466-51369485 | Msa0168580:intron | 45.0% | |
| TCCTGAGTGTGAAGAATGGA+GGG | + | chr1_4:51369467-51369486 | Msa0168580:intron | 45.0% | |
| GGACCAGCAACTGCTAAAAT+TGG | + | chr1_4:51369615-51369634 | Msa0168580:intron | 45.0% | |
| !! | TCCCCAATTTTAGCAGTTGC+TGG | - | chr1_4:51369621-51369640 | None:intergenic | 45.0% |
| GCAACTGCTAAAATTGGGGA+TGG | + | chr1_4:51369621-51369640 | Msa0168580:CDS | 45.0% | |
| GCTTCATGAACTCGTGTCTT+TGG | + | chr1_4:51369927-51369946 | Msa0168580:CDS | 45.0% | |
| CAAGTAGTTCCCTTTCAAGC+AGG | - | chr1_4:51370419-51370438 | None:intergenic | 45.0% | |
| ! | ATGCTTGGGCTAGATGAGAT+TGG | + | chr1_4:51370701-51370720 | Msa0168580:intron | 45.0% |
| ! | TGCTTGGGCTAGATGAGATT+GGG | + | chr1_4:51370702-51370721 | Msa0168580:intron | 45.0% |
| !! | CGAGAGCCTCTAAAGTTCTT+GGG | - | chr1_4:51370885-51370904 | None:intergenic | 45.0% |
| !! | ACGAGAGCCTCTAAAGTTCT+TGG | - | chr1_4:51370886-51370905 | None:intergenic | 45.0% |
| CTGCATGTACTATCACCAGT+TGG | + | chr1_4:51370907-51370926 | Msa0168580:CDS | 45.0% | |
| GCATGTACTATCACCAGTTG+GGG | + | chr1_4:51370909-51370928 | Msa0168580:CDS | 45.0% | |
| TTGGGGCTGAAGTTCTTACA+CGG | + | chr1_4:51370926-51370945 | Msa0168580:CDS | 45.0% | |
| GAAGGAGCTATTCACACAAC+AGG | + | chr1_4:51371157-51371176 | Msa0168580:CDS | 45.0% | |
| CTCTAAGTACACACACCAGA+AGG | - | chr1_4:51371242-51371261 | None:intergenic | 45.0% | |
| CTGATGGAATGACACATCCT+AGG | + | chr1_4:51371412-51371431 | Msa0168580:intron | 45.0% | |
| !! | TTGTAAGGTATTGCACGGAG+AGG | - | chr1_4:51371858-51371877 | None:intergenic | 45.0% |
| !! | TGTTAGCTGAGAGGTGTTAC+CGG | - | chr1_4:51371917-51371936 | None:intergenic | 45.0% |
| GGAGAAAACAACCTTCACCA+AGG | + | chr1_4:51372094-51372113 | Msa0168580:intron | 45.0% | |
| GAAAAGCTTTGCCTTGGTGA+AGG | - | chr1_4:51372108-51372127 | None:intergenic | 45.0% | |
| ! | GTAACGGAAAAGCTTTGCCT+TGG | - | chr1_4:51372114-51372133 | None:intergenic | 45.0% |
| TTCCATACAGTGGAAAGGTG+GGG | - | chr1_4:51372168-51372187 | None:intergenic | 45.0% | |
| GTTCCATACAGTGGAAAGGT+GGG | - | chr1_4:51372169-51372188 | None:intergenic | 45.0% | |
| AGTTCCATACAGTGGAAAGG+TGG | - | chr1_4:51372170-51372189 | None:intergenic | 45.0% | |
| AGGGAATCAGTTCCATACAG+TGG | - | chr1_4:51372178-51372197 | None:intergenic | 45.0% | |
| ATGTGTCAATTGGAGAGTGG+AGG | - | chr1_4:51372208-51372227 | None:intergenic | 45.0% | |
| GACATGTGTCAATTGGAGAG+TGG | - | chr1_4:51372211-51372230 | None:intergenic | 45.0% | |
| CAGAACGGACATGTGTCAAT+TGG | - | chr1_4:51372218-51372237 | None:intergenic | 45.0% | |
| ACAACGGCAACAACAGAATG+GGG | - | chr1_4:51372246-51372265 | None:intergenic | 45.0% | |
| GAACATTGGGCCACAAAGAA+TGG | - | chr1_4:51372301-51372320 | None:intergenic | 45.0% | |
| AGGAAAATAAGGGGGAGCAA+GGG | - | chr1_4:51372362-51372381 | None:intergenic | 45.0% | |
| AAGGAAAATAAGGGGGAGCA+AGG | - | chr1_4:51372363-51372382 | None:intergenic | 45.0% | |
| GTCAAGTATTCCAAGGCAAG+TGG | - | chr1_4:51372444-51372463 | None:intergenic | 45.0% | |
| CATGCACTGAAACAGTGATG+AGG | - | chr1_4:51373257-51373276 | None:intergenic | 45.0% | |
| TGTTTCAGTGCATGAGTCTC+TGG | + | chr1_4:51373263-51373282 | Msa0168580:intron | 45.0% | |
| ! | TCTAGAATGCTCAAAGCCAG+GGG | + | chr1_4:51373582-51373601 | Msa0168580:CDS | 45.0% |
| ATGAATGAATTGGCCCACCA+AGG | + | chr1_4:51373630-51373649 | Msa0168580:three_prime_UTR | 45.0% | |
| CGTTACAGCAGCACCAACAT+TGG | - | chr1_4:51364587-51364606 | None:intergenic | 50.0% | |
| ! | ATCTTCTGTGGTGGAGGCTA+TGG | + | chr1_4:51364969-51364988 | Msa0168580:CDS | 50.0% |
| AGTGTTTCGGCCTGTCTGTT+TGG | + | chr1_4:51365118-51365137 | Msa0168580:intron | 50.0% | |
| GTAGAGGAACCTGCAATGCA+AGG | - | chr1_4:51365575-51365594 | None:intergenic | 50.0% | |
| CCGTCTGAATGTCTTCCCTT+AGG | - | chr1_4:51366051-51366070 | None:intergenic | 50.0% | |
| TACCTACTACCTCCCAGCAT+GGG | + | chr1_4:51366362-51366381 | Msa0168580:intron | 50.0% | |
| GTGAAAAAACCCATGCTGGG+AGG | - | chr1_4:51366374-51366393 | None:intergenic | 50.0% | |
| AAGCACCTGCATTTCTGCAG+TGG | - | chr1_4:51366396-51366415 | None:intergenic | 50.0% | |
| ! | TAGAGTGAGGGACTAGCAGA+AGG | - | chr1_4:51366715-51366734 | None:intergenic | 50.0% |
| !! | GATAGGCATTGGGTAGAGTG+AGG | - | chr1_4:51366728-51366747 | None:intergenic | 50.0% |
| GCTTCCCCATAGATAGGCAT+TGG | - | chr1_4:51366739-51366758 | None:intergenic | 50.0% | |
| ATGGGGAAGCTTCCAATCAC+AGG | + | chr1_4:51366749-51366768 | Msa0168580:CDS | 50.0% | |
| !! | CAAAAGGTTGTTCTGGAGGC+AGG | + | chr1_4:51367020-51367039 | Msa0168580:CDS | 50.0% |
| CAGACATGGACAGGGAAACT+TGG | + | chr1_4:51367147-51367166 | Msa0168580:intron | 50.0% | |
| ACTGGCAGTTGCCAGTTGTA+CGG | - | chr1_4:51367352-51367371 | None:intergenic | 50.0% | |
| TGGCAACTGCCAGTTACCTA+GGG | + | chr1_4:51367358-51367377 | Msa0168580:intron | 50.0% | |
| ACTGCCAGTTACCTAGGGAA+TGG | + | chr1_4:51367363-51367382 | Msa0168580:intron | 50.0% | |
| GTCACCATTCCCTAGGTAAC+TGG | - | chr1_4:51367370-51367389 | None:intergenic | 50.0% | |
| TGTGTCAGTCACCATTCCCT+AGG | - | chr1_4:51367377-51367396 | None:intergenic | 50.0% | |
| TTGTAGGTGAGTGATCCCTC+AGG | - | chr1_4:51367789-51367808 | None:intergenic | 50.0% | |
| TCACTCGTTACTGTCCACTC+AGG | - | chr1_4:51368267-51368286 | None:intergenic | 50.0% | |
| GGTCTGATTTAGACACGCAG+AGG | - | chr1_4:51369272-51369291 | None:intergenic | 50.0% | |
| TCCCTCCATTCTTCACACTC+AGG | - | chr1_4:51369471-51369490 | None:intergenic | 50.0% | |
| ATTAGAACCTGCTGCAGTCC+AGG | + | chr1_4:51369903-51369922 | Msa0168580:intron | 50.0% | |
| ! | ACACGAGTTCATGAAGCACC+TGG | - | chr1_4:51369924-51369943 | None:intergenic | 50.0% |
| CAGTGATTGTTGATCCTGGC+TGG | - | chr1_4:51369971-51369990 | None:intergenic | 50.0% | |
| TTGTACTGTGAACCATGGCG+TGG | + | chr1_4:51370195-51370214 | Msa0168580:intron | 50.0% | |
| TGTACTGTGAACCATGGCGT+GGG | + | chr1_4:51370196-51370215 | Msa0168580:intron | 50.0% | |
| TAGCTAAAACACCCACGCCA+TGG | - | chr1_4:51370210-51370229 | None:intergenic | 50.0% | |
| GTAAGAACTTCAGCCCCAAC+TGG | - | chr1_4:51370925-51370944 | None:intergenic | 50.0% | |
| TCCTAGATAGGAGCCTCTCT+AGG | + | chr1_4:51371887-51371906 | Msa0168580:intron | 50.0% | |
| !! | TTAGCTGAGAGGTGTTACCG+GGG | - | chr1_4:51371915-51371934 | None:intergenic | 50.0% |
| !! | GTTAGCTGAGAGGTGTTACC+GGG | - | chr1_4:51371916-51371935 | None:intergenic | 50.0% |
| CAACTAGACTGCTCTCCCTA+TGG | + | chr1_4:51372073-51372092 | Msa0168580:intron | 50.0% | |
| AAAGGTGGGGGTCTGTTTGA+GGG | - | chr1_4:51372155-51372174 | None:intergenic | 50.0% | |
| TCCATACAGTGGAAAGGTGG+GGG | - | chr1_4:51372167-51372186 | None:intergenic | 50.0% | |
| CCACAAAGAATGGGCCTACA+AGG | - | chr1_4:51372291-51372310 | None:intergenic | 50.0% | |
| CCTTGTAGGCCCATTCTTTG+TGG | + | chr1_4:51372288-51372307 | Msa0168580:intron | 50.0% | |
| TTGTGGCCCAATGTTCTCCT+CGG | + | chr1_4:51372305-51372324 | Msa0168580:intron | 50.0% | |
| AAATAAGGGGGAGCAAGGGT+GGG | - | chr1_4:51372358-51372377 | None:intergenic | 50.0% | |
| AAAATAAGGGGGAGCAAGGG+TGG | - | chr1_4:51372359-51372378 | None:intergenic | 50.0% | |
| !! | ACCGGTGCTGTAAAGAACAC+TGG | + | chr1_4:51372730-51372749 | Msa0168580:intron | 50.0% |
| CCCAGTGTTCTTTACAGCAC+CGG | - | chr1_4:51372734-51372753 | None:intergenic | 50.0% | |
| !! | CCGGTGCTGTAAAGAACACT+GGG | + | chr1_4:51372731-51372750 | Msa0168580:intron | 50.0% |
| AGTGCATGAGTCTCTGGCAT+TGG | + | chr1_4:51373269-51373288 | Msa0168580:intron | 50.0% | |
| TTAGCATCTCATCTGACCCC+TGG | - | chr1_4:51373601-51373620 | None:intergenic | 50.0% | |
| !! | TTCTTCGGAGGTACCTTGGT+GGG | - | chr1_4:51373646-51373665 | None:intergenic | 50.0% |
| !! | ATTCTTCGGAGGTACCTTGG+TGG | - | chr1_4:51373647-51373666 | None:intergenic | 50.0% |
| GATTACTTGCAGGCACGGGT+AGG | + | chr1_4:51364946-51364965 | Msa0168580:CDS | 55.0% | |
| ACGGGTAGGATCTTCTGTGG+TGG | + | chr1_4:51364960-51364979 | Msa0168580:CDS | 55.0% | |
| GGTAGGATCTTCTGTGGTGG+AGG | + | chr1_4:51364963-51364982 | Msa0168580:CDS | 55.0% | |
| CATGCTGGGAGGTAGTAGGT+AGG | - | chr1_4:51366363-51366382 | None:intergenic | 55.0% | |
| CTACCTACTACCTCCCAGCA+TGG | + | chr1_4:51366361-51366380 | Msa0168580:intron | 55.0% | |
| AACCCATGCTGGGAGGTAGT+AGG | - | chr1_4:51366367-51366386 | None:intergenic | 55.0% | |
| ! | AGTGAGGGACTAGCAGAAGG+AGG | - | chr1_4:51366712-51366731 | None:intergenic | 55.0% |
| CTGGCAACTGCCAGTTACCT+AGG | + | chr1_4:51367357-51367376 | Msa0168580:intron | 55.0% | |
| GGACCATGATCCTGGAGTCA+AGG | - | chr1_4:51367867-51367886 | None:intergenic | 55.0% | |
| ! | GTATTGGTGGGGTTGGAGAG+TGG | + | chr1_4:51368985-51369004 | Msa0168580:intron | 55.0% |
| GTGGGGTTGGAGAGTGGATA+CGG | + | chr1_4:51368991-51369010 | Msa0168580:intron | 55.0% | |
| CTTCAGGGTGAAGCTTGAGC+AGG | - | chr1_4:51371816-51371835 | None:intergenic | 55.0% | |
| GCCTAGAGAGGCTCCTATCT+AGG | - | chr1_4:51371891-51371910 | None:intergenic | 55.0% | |
| AAGGTGGGGGTCTGTTTGAG+GGG | - | chr1_4:51372154-51372173 | None:intergenic | 55.0% | |
| GAAAGGTGGGGGTCTGTTTG+AGG | - | chr1_4:51372156-51372175 | None:intergenic | 55.0% | |
| ACCCCCACCTTTCCACTGTA+TGG | + | chr1_4:51372163-51372182 | Msa0168580:intron | 55.0% | |
| GGAGAGTGGAGGATGAGACA+GGG | - | chr1_4:51372197-51372216 | None:intergenic | 55.0% | |
| TGGAGAGTGGAGGATGAGAC+AGG | - | chr1_4:51372198-51372217 | None:intergenic | 55.0% | |
| CCCAGACCGAGGAGAACATT+GGG | - | chr1_4:51372314-51372333 | None:intergenic | 55.0% | |
| CCCAATGTTCTCCTCGGTCT+GGG | + | chr1_4:51372311-51372330 | Msa0168580:intron | 55.0% | |
| TCCCAGACCGAGGAGAACAT+TGG | - | chr1_4:51372315-51372334 | None:intergenic | 55.0% | |
| TGCTGTATCATCCCAGACCG+AGG | - | chr1_4:51372325-51372344 | None:intergenic | 55.0% | |
| AATAAGGGGGAGCAAGGGTG+GGG | - | chr1_4:51372357-51372376 | None:intergenic | 55.0% | |
| GGCACGGGTAGGATCTTCTG+TGG | + | chr1_4:51364957-51364976 | Msa0168580:CDS | 60.0% | |
| ! | TGAAGCACCTGGACTGCAGC+AGG | - | chr1_4:51369913-51369932 | None:intergenic | 60.0% |
| CAACAGTGTTAGCGCCAGCC+AGG | + | chr1_4:51369954-51369973 | Msa0168580:CDS | 60.0% | |
| TGTTACCGGGGAGCCTAGAG+AGG | - | chr1_4:51371903-51371922 | None:intergenic | 60.0% | |
| GCCCAATGTTCTCCTCGGTC+TGG | + | chr1_4:51372310-51372329 | Msa0168580:intron | 60.0% | |
| AGGAGCCTCTCTAGGCTCCC+CGG | + | chr1_4:51371895-51371914 | Msa0168580:intron | 65.0% | |
| GTGGGGGTCTGTTTGAGGGG+AGG | - | chr1_4:51372151-51372170 | None:intergenic | 65.0% | |
| GGAGCAAGGGTGGGGACGTG+GGG | - | chr1_4:51372349-51372368 | None:intergenic | 70.0% | |
| GGGAGCAAGGGTGGGGACGT+GGG | - | chr1_4:51372350-51372369 | None:intergenic | 70.0% | |
| GGGGAGCAAGGGTGGGGACG+TGG | - | chr1_4:51372351-51372370 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 51364484 | 51374064 | 51364484 | ID=Msa0168580;Name=Msa0168580 |
| chr1_4 | mRNA | 51364484 | 51374064 | 51364484 | ID=Msa0168580-mRNA-1;Parent=Msa0168580;Name=Msa0168580-mRNA-1;_AED=0.17;_eAED=0.17;_QI=204|0.76|0.71|1|0.76|0.71|14|452|519 |
| chr1_4 | exon | 51364484 | 51364777 | 51364484 | ID=Msa0168580-mRNA-1:exon:15071;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51364880 | 51364990 | 51364880 | ID=Msa0168580-mRNA-1:exon:15072;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51365585 | 51365758 | 51365585 | ID=Msa0168580-mRNA-1:exon:15073;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51366001 | 51366069 | 51366001 | ID=Msa0168580-mRNA-1:exon:15074;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51366193 | 51366319 | 51366193 | ID=Msa0168580-mRNA-1:exon:15075;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51366698 | 51366770 | 51366698 | ID=Msa0168580-mRNA-1:exon:15076;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51366953 | 51367069 | 51366953 | ID=Msa0168580-mRNA-1:exon:15077;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51368639 | 51368771 | 51368639 | ID=Msa0168580-mRNA-1:exon:15078;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51369616 | 51369691 | 51369616 | ID=Msa0168580-mRNA-1:exon:15079;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51369818 | 51369918 | 51369818 | ID=Msa0168580-mRNA-1:exon:15080;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51369925 | 51370134 | 51369925 | ID=Msa0168580-mRNA-1:exon:15081;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51370874 | 51370989 | 51370874 | ID=Msa0168580-mRNA-1:exon:15082;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51371085 | 51371178 | 51371085 | ID=Msa0168580-mRNA-1:exon:15083;Parent=Msa0168580-mRNA-1 |
| chr1_4 | exon | 51373544 | 51374064 | 51373544 | ID=Msa0168580-mRNA-1:exon:15084;Parent=Msa0168580-mRNA-1 |
| chr1_4 | five_prime_UTR | 51364484 | 51364687 | 51364484 | ID=Msa0168580-mRNA-1:five_prime_utr;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51364688 | 51364777 | 51364688 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51364880 | 51364990 | 51364880 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51365585 | 51365758 | 51365585 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51366001 | 51366069 | 51366001 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51366193 | 51366319 | 51366193 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51366698 | 51366770 | 51366698 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51366953 | 51367069 | 51366953 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51368639 | 51368771 | 51368639 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51369616 | 51369691 | 51369616 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51369818 | 51369918 | 51369818 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51369925 | 51370134 | 51369925 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51370874 | 51370989 | 51370874 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51371085 | 51371178 | 51371085 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | CDS | 51373544 | 51373612 | 51373544 | ID=Msa0168580-mRNA-1:cds;Parent=Msa0168580-mRNA-1 |
| chr1_4 | three_prime_UTR | 51373613 | 51374064 | 51373613 | ID=Msa0168580-mRNA-1:three_prime_utr;Parent=Msa0168580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
