AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0030330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030330 MtrunA17_Chr1g0188041 97.730 1013 23 0 1 1013 1 1013 0.0 2016
Msa0030330 MtrunA17_Chr7g0275961 28.755 1012 669 19 18 1005 16 999 2.98e-112 371
Msa0030330 MtrunA17_Chr8g0346441 28.208 1021 683 20 8 1005 11 1004 1.93e-108 360
Msa0030330 MtrunA17_Chr1g0166171 68.027 147 46 1 587 733 6 151 2.13e-56 192
Msa0030330 MtrunA17_Chr3g0144071 26.792 795 511 33 258 999 26 802 2.08e-46 179
Msa0030330 MtrunA17_Chr3g0084371 28.031 635 402 18 392 1005 231 831 1.62e-44 174
Msa0030330 MtrunA17_Chr1g0166121 71.014 69 20 0 96 164 1 69 5.31e-24 97.4
Msa0030330 MtrunA17_Chr1g0199321 21.997 591 384 15 32 600 31 566 1.59e-17 87.8
Msa0030330 MtrunA17_Chr4g0031431 23.583 547 357 18 91 618 84 588 1.60e-13 74.7
Msa0030330 MtrunA17_Chr7g0275081 38.202 89 55 0 239 327 56 144 1.15e-12 71.6
Msa0030330 MtrunA17_Chr4g0044411 25.360 347 219 10 265 600 277 594 9.73e-12 68.9
Msa0030330 MtrunA17_Chr5g0413681 23.729 295 206 6 47 331 65 350 6.95e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030330 AT1G76390.1 27.595 761 470 29 264 965 28 766 1.03e-37 153
Msa0030330 AT1G76390.2 27.595 761 470 29 264 965 28 766 1.03e-37 153
Msa0030330 AT1G20780.1 26.826 753 488 29 264 968 26 763 1.29e-36 149
Msa0030330 AT1G20780.2 26.826 753 488 29 264 968 26 763 1.29e-36 149
Msa0030330 AT1G20780.3 26.826 753 488 29 264 968 26 763 1.29e-36 149
Msa0030330 AT1G68940.1 23.258 1062 697 33 35 999 37 1077 1.04e-34 144
Msa0030330 AT1G68940.2 23.202 1043 685 32 35 982 37 1058 7.17e-34 141
Msa0030330 AT1G68940.3 25.131 764 508 26 261 973 246 996 1.70e-31 134
Msa0030330 AT3G46510.1 22.978 544 343 22 85 600 80 575 5.05e-12 70.5
Msa0030330 AT1G71020.2 25.067 371 228 12 265 616 99 438 5.99e-12 69.7
Msa0030330 AT1G71020.1 25.067 371 228 12 265 616 247 586 8.48e-12 69.7
Msa0030330 AT3G54790.3 24.643 280 179 10 70 347 67 316 1.04e-11 69.7
Msa0030330 AT3G54790.1 24.643 280 179 10 70 347 67 316 1.04e-11 69.7
Msa0030330 AT3G54790.2 24.643 280 179 10 70 347 31 280 1.85e-11 68.9
Msa0030330 AT3G52450.1 30.496 141 81 2 265 388 11 151 1.89e-11 68.2
Msa0030330 AT2G23140.1 29.213 178 110 3 154 331 142 303 3.31e-11 68.2
Msa0030330 AT2G23140.2 29.213 178 110 3 154 331 139 300 3.36e-11 68.2
Msa0030330 AT2G23140.4 29.213 178 110 3 154 331 139 300 3.36e-11 68.2

Find 236 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGAACCTCTTGTGTTTC+TGG 0.059826 1_1:-56534704 None:intergenic
GCAAATCTGTTCCGACTTTA+TGG 0.111568 1_1:-56537266 None:intergenic
GCAGCAGCTGATGTTCTTAT+TGG 0.181583 1_1:+56533873 Msa0030330:CDS
CTACAAGAGGATTGATTTAT+AGG 0.186849 1_1:+56533725 Msa0030330:five_prime_UTR
GGCAAAAGCCATAGTTAATT+TGG 0.187215 1_1:+56535786 Msa0030330:CDS
TTGACAGGCAGTAATATTTA+TGG 0.193971 1_1:+56537137 Msa0030330:CDS
TTAATTTACATTTAAGAATT+AGG 0.197480 1_1:-56537526 None:intergenic
GGCAGAAGCTTTAGGACTTT+TGG 0.205522 1_1:+56537046 Msa0030330:CDS
CCTTAGCAGCTTTCCTTCTA+AGG 0.210627 1_1:-56537169 None:intergenic
AAATGCAATGAGACCTTTAT+TGG 0.217381 1_1:+56536992 Msa0030330:CDS
CATCTTCACTTCTCTGTCAT+TGG 0.229854 1_1:-56534954 None:intergenic
TAATTACCTTGCAGGTAATT+AGG 0.233404 1_1:+56537772 Msa0030330:three_prime_UTR
CTGTTGCAAAACTAGCAATT+TGG 0.235539 1_1:-56536130 None:intergenic
GTTAGTTCTCGTTCGGATTT+TGG 0.239898 1_1:-56536471 None:intergenic
ATCAAAGCTTCTAGCCTTCT+AGG 0.241589 1_1:-56536381 None:intergenic
ACCTCTGCTGAATCGTTTCC+AGG 0.248782 1_1:-56535360 None:intergenic
ATCTGCAATCTCTGGAGTTT+TGG 0.262837 1_1:+56537229 Msa0030330:CDS
CTCTTGAAGCAGATGTTAAA+AGG 0.268785 1_1:+56534009 Msa0030330:CDS
CATTGCTTGAACGTTATTCT+AGG 0.272811 1_1:+56537198 Msa0030330:CDS
AGATGTCACTAAGTTGTTCT+TGG 0.287307 1_1:+56537479 Msa0030330:three_prime_UTR
AACAAGGATTGGATCTCTAT+TGG 0.289337 1_1:+56534893 Msa0030330:CDS
TCACTTAAGGCAGAAGCTTT+AGG 0.292250 1_1:+56537038 Msa0030330:CDS
ACAAATTAATCTTTCAAGTT+AGG 0.305712 1_1:-56537407 None:intergenic
CCAACGCTACGTGCTCTTCT+TGG 0.306871 1_1:+56536183 Msa0030330:CDS
TCTTCGATCGATTGTCTTAG+TGG 0.313992 1_1:-56534752 None:intergenic
ACTAAGTTGTTCTTGGATAT+TGG 0.321575 1_1:+56537486 Msa0030330:three_prime_UTR
CCGCATAAACGGAGCTGTTA+TGG 0.327966 1_1:+56534598 Msa0030330:CDS
ACAAGGATTGGATCTCTATT+GGG 0.328260 1_1:+56534894 Msa0030330:CDS
ATTACCTGCAAGGTAATTAG+AGG 0.336307 1_1:-56537768 None:intergenic
AGAAAGTTTCTCGAGGATTT+CGG 0.337226 1_1:-56536037 None:intergenic
TATCGAGTCACAGCGCGATT+TGG 0.345338 1_1:+56536611 Msa0030330:CDS
AACTACAAAGTTGATTGAAA+TGG 0.346902 1_1:+56536491 Msa0030330:CDS
ACGCTCTCAGTGCACTCTTC+AGG 0.348203 1_1:+56536571 Msa0030330:CDS
TTGTATTACAATTACCTTGC+AGG 0.352064 1_1:-56537744 None:intergenic
TGTTAAAAGGGCGAATAATA+TGG 0.357230 1_1:+56534022 Msa0030330:CDS
AACACTTTCTACATTGGTAT+TGG 0.361873 1_1:+56536929 Msa0030330:CDS
CAAACCTCTAATTACCTTGC+AGG 0.364770 1_1:+56537764 Msa0030330:three_prime_UTR
CAGCTATTAGAGCCTGCATT+TGG 0.370250 1_1:-56534859 None:intergenic
TAACAAATCAATTGCTGCCT+TGG 0.372173 1_1:-56535235 None:intergenic
ACAGTTAATATTGTACCTAT+TGG 0.373426 1_1:-56533819 None:intergenic
GTTTCTGATCTCTTAGTCCT+TGG 0.375417 1_1:-56534277 None:intergenic
AAACCAGCAACCGCTTGGTT+TGG 0.375908 1_1:-56536757 None:intergenic
TCAATACTTTGAAAGGGTTC+AGG 0.379007 1_1:+56534517 Msa0030330:CDS
AGGTATTCAACTACTCCTTC+TGG 0.379870 1_1:-56536351 None:intergenic
GCCATTGATATTCTTGAATC+CGG 0.380624 1_1:-56535766 None:intergenic
GGAATTGATTTCTTTGTTGA+TGG 0.386950 1_1:+56536072 Msa0030330:CDS
ATCCAACACCAAATTAACTA+TGG 0.387861 1_1:-56535794 None:intergenic
GGATCATATTATTTCGTGCT+TGG 0.390606 1_1:+56535194 Msa0030330:CDS
AACTAGCAATTTGGTGATGA+TGG 0.392035 1_1:-56536121 None:intergenic
GTTCCTGTGGAAAGGCTAAC+AGG 0.396841 1_1:-56534626 None:intergenic
TTAGAGCCTGCATTTGGCTC+AGG 0.401778 1_1:-56534853 None:intergenic
CTTTGTAGTTAGTTCTCGTT+CGG 0.401965 1_1:-56536478 None:intergenic
AACATCAAATCTAGAATAAG+AGG 0.405447 1_1:-56535976 None:intergenic
GAAAAGAGTTGGCCAGCATT+AGG 0.407138 1_1:+56534378 Msa0030330:CDS
AGAAGGCTAGAAGCTTTGAT+TGG 0.408094 1_1:+56536384 Msa0030330:CDS
CGCTGTGACTCGATATTTGT+AGG 0.409793 1_1:-56536603 None:intergenic
TTTCCAAACCAAGCGGTTGC+TGG 0.410881 1_1:+56536754 Msa0030330:CDS
AAAATTCTATTAACAAGGAT+TGG 0.412160 1_1:+56534882 Msa0030330:CDS
GCACTGGCTCAATATCAAAT+AGG 0.412204 1_1:-56533926 None:intergenic
TGCCAATTGTATCTCTTCTC+TGG 0.415239 1_1:-56533757 None:intergenic
TCTTTCCTTTGCCGCATAAA+CGG 0.416779 1_1:+56534587 Msa0030330:CDS
CTGCTCCAAGAAAACAAATT+CGG 0.420958 1_1:-56534438 None:intergenic
GACTCTAGAGCAACTCTAGC+AGG 0.426038 1_1:-56533987 None:intergenic
CGACAATGATAATGTACAAA+TGG 0.431176 1_1:+56536422 Msa0030330:CDS
GATACCGTTATCTCGATCCT+TGG 0.434218 1_1:+56534926 Msa0030330:CDS
TTAAGAATCAATACTTTGAA+AGG 0.434740 1_1:+56534510 Msa0030330:CDS
ACTACAAAGTTGATTGAAAT+GGG 0.437763 1_1:+56536492 Msa0030330:CDS
AAGGAAATGGTGGAATACTA+TGG 0.438629 1_1:+56537086 Msa0030330:CDS
GGCATTTGCAAGTTCGAGAC+TGG 0.440948 1_1:+56536204 Msa0030330:CDS
CATGAGCAGTTCTCAAGACT+TGG 0.442224 1_1:-56533851 None:intergenic
ATGGAGACGGACACCTTAGA+AGG 0.442619 1_1:+56537156 Msa0030330:CDS
AGACCTTTCTTTATCAGCCC+TGG 0.443666 1_1:+56535897 Msa0030330:CDS
GATTTAAACTTGATACAACT+TGG 0.449112 1_1:+56535817 Msa0030330:CDS
TTGCAAGTTCGAGACTGGTT+TGG 0.450043 1_1:+56536209 Msa0030330:CDS
TGATATTGAGCCAGTGCTAA+AGG 0.454081 1_1:+56533932 Msa0030330:CDS
CTATCATGAGCTGCACATAA+AGG 0.455630 1_1:-56536798 None:intergenic
TCTTCATCATCTGCAATCTC+TGG 0.456840 1_1:+56537221 Msa0030330:CDS
AAGGGATATCGGAAGGTCTC+TGG 0.458262 1_1:+56534124 Msa0030330:CDS
GAGCAAGTTACAAGGGATAT+CGG 0.462903 1_1:+56534113 Msa0030330:CDS
GTAGAATCACACGACTAGAT+AGG 0.463205 1_1:-56537385 None:intergenic
CAAGTCAAAATCTCCAATAA+AGG 0.465556 1_1:-56537005 None:intergenic
TACTTTCATAGTAAATGATC+AGG 0.470018 1_1:+56537640 Msa0030330:three_prime_UTR
GACCTTTCTTTATCAGCCCT+GGG 0.470312 1_1:+56535898 Msa0030330:CDS
CTAGCCTTCTAGGCTTGAAA+AGG 0.472124 1_1:-56536371 None:intergenic
ATTTCTTTGTTGATGGAGAA+GGG 0.472359 1_1:+56536079 Msa0030330:CDS
AAGGTAATTGTAATATATAC+TGG 0.472848 1_1:+56537711 Msa0030330:three_prime_UTR
TTGGGGTAGTGAGTCACTTA+AGG 0.479262 1_1:+56537025 Msa0030330:CDS
GGTCCTTCACAAGGGTTACA+AGG 0.481227 1_1:-56535338 None:intergenic
CTCTAGAGCTGATGCAGCAA+GGG 0.481825 1_1:+56534475 Msa0030330:CDS
AGCTGTAATTCCTTTAGCAC+TGG 0.484109 1_1:-56533942 None:intergenic
TAGATTTGATGTTCTCTCCT+CGG 0.486570 1_1:+56535986 Msa0030330:CDS
TAAGAATCAATACTTTGAAA+GGG 0.486686 1_1:+56534511 Msa0030330:CDS
TGCAAGGGCAGTTGGCGTGC+CGG 0.487076 1_1:+56534337 Msa0030330:CDS
GGATTGGAACTCATACCAAT+AGG 0.487791 1_1:+56533804 Msa0030330:CDS
CGTTTCCAGGGTCCTTCACA+AGG 0.487815 1_1:-56535347 None:intergenic
TATTGGAAAAGAGAGTTTCA+AGG 0.490061 1_1:+56533890 Msa0030330:CDS
CCTATCTCGGATGGTTCCAC+CGG 0.490488 1_1:-56534356 None:intergenic
ACGAAGGTTGTGACCTGAGT+TGG 0.490630 1_1:-56536157 None:intergenic
GCTATCGAGAATTTCTGATC+AGG 0.493655 1_1:+56534175 Msa0030330:CDS
TTGAGAAAATCAACAAGTAA+AGG 0.494414 1_1:-56536651 None:intergenic
GATGCAAAGGGTTGAGTTCG+AGG 0.494531 1_1:+56534217 Msa0030330:CDS
AGCCATAGTTAATTTGGTGT+TGG 0.494995 1_1:+56535792 Msa0030330:CDS
GTATGTCATTCGCGAAAGCC+TGG 0.495334 1_1:-56534304 None:intergenic
AAGGGAATTATTGCTTCCTC+CGG 0.497226 1_1:+56535946 Msa0030330:CDS
GATAGAGAGATATGATTCAA+AGG 0.499215 1_1:+56534541 Msa0030330:CDS
CTAGCTGATCGCATGATTCG+AGG 0.500921 1_1:+56535465 Msa0030330:CDS
CCTTAGAAGGAAAGCTGCTA+AGG 0.501027 1_1:+56537169 Msa0030330:CDS
AACGTTAAAGCTCTCGAAGA+AGG 0.504766 1_1:+56537362 Msa0030330:three_prime_UTR
CTCTGTCATTGGACTTCCCA+AGG 0.507482 1_1:-56534943 None:intergenic
TCAGCCCTGGGTAAACTAGC+TGG 0.507504 1_1:+56535910 Msa0030330:CDS
TTGGAAATAACTGTGAGCTT+TGG 0.507616 1_1:-56536738 None:intergenic
GACTACAAGGTGAGATGCAA+AGG 0.508604 1_1:+56534204 Msa0030330:CDS
GAGGAGATTGCAAGGGCAGT+TGG 0.509609 1_1:+56534329 Msa0030330:CDS
ATAAGTGAGAACACAGAAAG+AGG 0.510077 1_1:-56537585 None:intergenic
TTCCAGAGAAGAGATACAAT+TGG 0.512392 1_1:+56533755 Msa0030330:five_prime_UTR
GATTTCTTTGTTGATGGAGA+AGG 0.512649 1_1:+56536078 Msa0030330:CDS
ATACCGTTATCTCGATCCTT+GGG 0.513686 1_1:+56534927 Msa0030330:CDS
AGCTGGATCTCATGCTAACA+AGG 0.519513 1_1:+56535927 Msa0030330:CDS
TCTACTTGCTAGTTAAATGC+CGG 0.520480 1_1:+56534072 Msa0030330:CDS
TCATAGTAAATGATCAGGAT+AGG 0.520748 1_1:+56537645 Msa0030330:three_prime_UTR
CTTCCCAAGGATCGAGATAA+CGG 0.521135 1_1:-56534930 None:intergenic
CCTTTGATAGAAATGATGTC+TGG 0.521661 1_1:+56535859 Msa0030330:CDS
TGTATTACAATTACCTTGCA+GGG 0.521692 1_1:-56537743 None:intergenic
TAGAGCCTGCATTTGGCTCA+GGG 0.522213 1_1:-56534852 None:intergenic
AATGTACAAATGGCTGCAGC+TGG 0.523529 1_1:+56536432 Msa0030330:CDS
AGGACTAAGAGATCAGAAAC+AGG 0.524044 1_1:+56534280 Msa0030330:CDS
TTTGAAACTTCTGTGAGGTA+AGG 0.525655 1_1:+56533387 Msa0030330:five_prime_UTR
TCGCGTTTGATTTGTTTGAC+AGG 0.525905 1_1:+56537122 Msa0030330:CDS
CCGGTGGAACCATCCGAGAT+AGG 0.527413 1_1:+56534356 Msa0030330:CDS
TATCATTGTCGTCGTTCTCG+AGG 0.528609 1_1:-56536410 None:intergenic
CGGCAAAGGAAAGAATTAAG+AGG 0.530404 1_1:-56534578 None:intergenic
AGAGATCAGCTATTGAAGGT+TGG 0.530598 1_1:+56534657 Msa0030330:CDS
TTGGAAGCAAATGCTTTACC+TGG 0.532479 1_1:+56536852 Msa0030330:CDS
ACCGGATTCAAGAATATCAA+TGG 0.533121 1_1:+56535765 Msa0030330:CDS
AAACTTGATACAACTTGGAA+AGG 0.535362 1_1:+56535822 Msa0030330:CDS
AATACAAACACTTTCTACAT+TGG 0.535747 1_1:+56536923 Msa0030330:CDS
GCAATTGCAGCAGCTTTCAT+CGG 0.538108 1_1:+56536696 Msa0030330:CDS
TCACTGCTGCTAATTGTGGC+TGG 0.538398 1_1:+56535433 Msa0030330:CDS
TGTGAGAGATCAGCTATTGA+AGG 0.539191 1_1:+56534653 Msa0030330:CDS
GGAATTATTGCTTCCTCCGG+AGG 0.539312 1_1:+56535949 Msa0030330:CDS
TGATGTTCTCTCCTCGGACA+AGG 0.543610 1_1:+56535992 Msa0030330:CDS
CCAGACATCATTTCTATCAA+AGG 0.545276 1_1:-56535859 None:intergenic
TTGATACAACTTGGAAAGGA+AGG 0.545563 1_1:+56535826 Msa0030330:CDS
AGGAAGTTGAGCAAGTTACA+AGG 0.548285 1_1:+56534105 Msa0030330:CDS
TCTTGAAGCAGATGTTAAAA+GGG 0.550180 1_1:+56534010 Msa0030330:CDS
AAACTTTCTTCTTCTGACGA+TGG 0.550475 1_1:+56536051 Msa0030330:CDS
AGAATCCCTGAGCCAAATGC+AGG 0.550783 1_1:+56534847 Msa0030330:CDS
GAGTTGCTTCAAGAAAGATC+TGG 0.552357 1_1:+56535261 Msa0030330:CDS
AATTGGCTGAATCACAAGGA+TGG 0.555747 1_1:+56535172 Msa0030330:CDS
GATCCTGTTAGCCTTTCCAC+AGG 0.555922 1_1:+56534623 Msa0030330:CDS
CAGCTCCGTTTATGCGGCAA+AGG 0.557270 1_1:-56534592 None:intergenic
GATAAAGCTGTTACATGGTG+AGG 0.558362 1_1:+56536878 Msa0030330:CDS
TACCCAGGGCTGATAAAGAA+AGG 0.560311 1_1:-56535900 None:intergenic
CACATGTAGTTCCTGTGGAA+AGG 0.563701 1_1:-56534634 None:intergenic
TTCTCTCAGCATGAACCAGA+AGG 0.565766 1_1:+56536336 Msa0030330:CDS
GTAACCCTTGTGAAGGACCC+TGG 0.565954 1_1:+56535342 Msa0030330:CDS
GGCAGTAATATTTATGGAGA+CGG 0.567426 1_1:+56537143 Msa0030330:CDS
AGCTGAAAATTCTATTAACA+AGG 0.570382 1_1:+56534877 Msa0030330:CDS
ATTGGCTGAATCACAAGGAT+GGG 0.570651 1_1:+56535173 Msa0030330:CDS
ATTGGAAGAGCATCCGCAGA+GGG 0.571893 1_1:+56536947 Msa0030330:CDS
AAAGGAAAGAATTAAGAGGT+TGG 0.572084 1_1:-56534574 None:intergenic
ACTTTGAAAGATGTTGTAGA+GGG 0.572945 1_1:+56534989 Msa0030330:CDS
CCAAGAAGAGCACGTAGCGT+TGG 0.573594 1_1:-56536183 None:intergenic
GAGTCAGAATCATCAAGAAG+TGG 0.574190 1_1:-56536276 None:intergenic
CAAGGATTGGATCTCTATTG+GGG 0.575873 1_1:+56534895 Msa0030330:CDS
AAAGCAATTCTTGCAGCCAA+TGG 0.577003 1_1:+56536237 Msa0030330:CDS
TTGCTCAACTTCCTCGACAA+TGG 0.577351 1_1:-56534096 None:intergenic
TTGTTCTTGGATATTGGCGT+CGG 0.577610 1_1:+56537492 Msa0030330:three_prime_UTR
CCTCTGCTGAATCGTTTCCA+GGG 0.579125 1_1:-56535359 None:intergenic
GCTGAGAGAAAAGAAAGAGC+AGG 0.581887 1_1:-56536323 None:intergenic
TGCTTCAAGAAAGATCTGGT+TGG 0.583477 1_1:+56535265 Msa0030330:CDS
ATTTAACTAGCAAGTAGAAA+CGG 0.583722 1_1:-56534067 None:intergenic
AGAGAAGAGATACAATTGGC+AGG 0.584067 1_1:+56533759 Msa0030330:five_prime_UTR
TAGAATAAGAGGAACACCTC+CGG 0.584174 1_1:-56535965 None:intergenic
CACTTTGAAAGATGTTGTAG+AGG 0.586417 1_1:+56534988 Msa0030330:CDS
CCATAACAGCTCCGTTTATG+CGG 0.587162 1_1:-56534598 None:intergenic
AAGGGCAGTTGGCGTGCCGG+TGG 0.588235 1_1:+56534340 Msa0030330:CDS
ATTGTCACTGCTGCTAATTG+TGG 0.588383 1_1:+56535429 Msa0030330:CDS
TTGCAACAGAATTCCAACTC+AGG 0.589919 1_1:+56536144 Msa0030330:CDS
TAACCTTGTAACCCTTGTGA+AGG 0.590842 1_1:+56535335 Msa0030330:CDS
ATCCGAGATAGGAAAAGAGT+TGG 0.592571 1_1:+56534367 Msa0030330:CDS
CGAATCATGCGATCAGCTAG+TGG 0.593637 1_1:-56535462 None:intergenic
AGAGTTGGCCAGCATTAGGA+AGG 0.594767 1_1:+56534382 Msa0030330:CDS
GAGAAATTGGCTGAATCACA+AGG 0.594803 1_1:+56535168 Msa0030330:CDS
GCAGGTTTATAGCAGTCTCT+CGG 0.596490 1_1:-56536305 None:intergenic
ACTACAAGGTGAGATGCAAA+GGG 0.597147 1_1:+56534205 Msa0030330:CDS
GATCAGGTTGATAGACTACA+AGG 0.597370 1_1:+56534191 Msa0030330:CDS
ACATACTTGAGGAGATTGCA+AGG 0.599820 1_1:+56534321 Msa0030330:CDS
CACGTAGCGTTGGCTTACGA+AGG 0.602202 1_1:-56536173 None:intergenic
TCTCTAGAGCTGATGCAGCA+AGG 0.604293 1_1:+56534474 Msa0030330:CDS
CGTAAACCTAATTACCTGCA+AGG 0.606045 1_1:-56537778 None:intergenic
TACAGGTTCAATCACTGCAA+AGG 0.608049 1_1:+56536674 Msa0030330:CDS
TTCCAATAGACAAAATGTTG+TGG 0.608354 1_1:-56536835 None:intergenic
GAGATCCAGCTAGTTTACCC+AGG 0.610834 1_1:-56535915 None:intergenic
CTCACAGAAGTTTCAAACTG+TGG 0.611272 1_1:-56533381 None:intergenic
TCTCTCACATGTAGTTCCTG+TGG 0.611431 1_1:-56534639 None:intergenic
TGGAAACGATTCAGCAGAGG+TGG 0.613714 1_1:+56535362 Msa0030330:CDS
AAGAATTAGAGATACACCAT+TGG 0.614299 1_1:-56536253 None:intergenic
CAACTTCCTCGACAATGGAC+CGG 0.616683 1_1:-56534091 None:intergenic
GGTTTGATAAAGCTGTTACA+TGG 0.619938 1_1:+56536873 Msa0030330:CDS
AAGCAACTCTAACATTTCCA+AGG 0.624995 1_1:+56535218 Msa0030330:CDS
CAAATATGAAAATCAGACAA+TGG 0.629875 1_1:-56537294 None:intergenic
TAAGACAATCGATCGAAGAG+TGG 0.630519 1_1:+56534756 Msa0030330:CDS
AAGAGATCAGAAACAGGACC+AGG 0.632504 1_1:+56534286 Msa0030330:CDS
AAGTTACAAGGGATATCGGA+AGG 0.635464 1_1:+56534117 Msa0030330:CDS
TTCTTGAAGATACTAGCTTG+AGG 0.637093 1_1:+56534720 Msa0030330:CDS
AGATCCAGCTAGTTTACCCA+GGG 0.639000 1_1:-56535914 None:intergenic
GGATTGGATCTCTATTGGGG+AGG 0.641735 1_1:+56534898 Msa0030330:CDS
TGTAACAGCTTTATCAAACC+AGG 0.642306 1_1:-56536870 None:intergenic
CAGAAGAAGAAAGTTTCTCG+AGG 0.644334 1_1:-56536044 None:intergenic
ATTGTTGACAAGTTGAACCA+AGG 0.644614 1_1:+56534260 Msa0030330:CDS
GGAAGTTGAGCAAGTTACAA+GGG 0.644907 1_1:+56534106 Msa0030330:CDS
AACTGATCCAGAAACACAAG+AGG 0.645279 1_1:+56534697 Msa0030330:CDS
AGAGGGGCATGCAAGAAACA+AGG 0.645650 1_1:+56535006 Msa0030330:CDS
CCCTGGAAACGATTCAGCAG+AGG 0.647958 1_1:+56535359 Msa0030330:CDS
TTTCGCGAATGACATACTTG+AGG 0.650871 1_1:+56534310 Msa0030330:CDS
GTTTCCAGGGTCCTTCACAA+GGG 0.658541 1_1:-56535346 None:intergenic
TAAATGCCGGTCCATTGTCG+AGG 0.660709 1_1:+56534085 Msa0030330:CDS
ACAGTTATTTCCAAACCAAG+CGG 0.662952 1_1:+56536747 Msa0030330:CDS
CTTTGAAAGATGTTGTAGAG+GGG 0.675379 1_1:+56534990 Msa0030330:CDS
GAAACTCTAGGCCATAAAGT+CGG 0.676751 1_1:+56537255 Msa0030330:exon
AATAAGAGGAACACCTCCGG+AGG 0.680566 1_1:-56535962 None:intergenic
GTAATGAATGACCTTGTCCG+AGG 0.681100 1_1:-56536003 None:intergenic
TATGAGTTCCAATCCTACCA+TGG 0.683552 1_1:-56533796 None:intergenic
GCTGGATCTCATGCTAACAA+GGG 0.684666 1_1:+56535928 Msa0030330:CDS
AATAGGTACAATATTAACTG+TGG 0.686641 1_1:+56533821 Msa0030330:CDS
ACAAAGTTGATTGAAATGGG+AGG 0.690277 1_1:+56536495 Msa0030330:CDS
CAGCGCGATTTGGTTAAACG+CGG 0.693546 1_1:+56536621 Msa0030330:CDS
AACAAACGAGCACCCCTCTG+CGG 0.694775 1_1:-56536960 None:intergenic
CACAGTTTGAAACTTCTGTG+AGG 0.697984 1_1:+56533382 Msa0030330:five_prime_UTR
CATACTTGAGGAGATTGCAA+GGG 0.701171 1_1:+56534322 Msa0030330:CDS
CTAGCAAGTAGAAACGGCCA+CGG 0.705648 1_1:-56534061 None:intergenic
GGTGGAATACTATGGAACGA+CGG 0.715990 1_1:+56537094 Msa0030330:CDS
GTTGAGAAGTACAAGAACCG+TGG 0.724475 1_1:+56534044 Msa0030330:CDS
TATTGGAAGAGCATCCGCAG+AGG 0.727150 1_1:+56536946 Msa0030330:CDS
TTGGAAGAGCATCCGCAGAG+GGG 0.744656 1_1:+56536948 Msa0030330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATTATGTAAAATTATATA+TGG + chr1_1:56533610-56533629 Msa0030330:intron 10.0%
!! TTAATTTACATTTAAGAATT+AGG - chr1_1:56537529-56537548 None:intergenic 10.0%
!!! ATTTTCATATTTGATCTATT+AGG + chr1_1:56537304-56537323 Msa0030330:three_prime_UTR 15.0%
!! AACTATAATTTATCATGCTA+AGG - chr1_1:56533551-56533570 None:intergenic 20.0%
!!! ATGACTTATTCTAGAATTAA+TGG + chr1_1:56533677-56533696 Msa0030330:intron 20.0%
!! TTAAGAATCAATACTTTGAA+AGG + chr1_1:56534510-56534529 Msa0030330:CDS 20.0%
!!! TAAGAATCAATACTTTGAAA+GGG + chr1_1:56534511-56534530 Msa0030330:CDS 20.0%
!!! TCAATTATTGTCTTTTGATA+AGG + chr1_1:56534786-56534805 Msa0030330:CDS 20.0%
!! AAAATTCTATTAACAAGGAT+TGG + chr1_1:56534882-56534901 Msa0030330:CDS 20.0%
!! CATTTGCATAAAAATGTAAT+AGG + chr1_1:56535146-56535165 Msa0030330:intron 20.0%
!! AAAAATGTAATAGGAGAAAT+TGG + chr1_1:56535155-56535174 Msa0030330:intron 20.0%
!!! ATCATAAGCATTTTAAAAAC+AGG + chr1_1:56536528-56536547 Msa0030330:CDS 20.0%
!!! ACAAATTAATCTTTCAAGTT+AGG - chr1_1:56537410-56537429 None:intergenic 20.0%
!!! TCTTTTTCTTTGTATAAACA+AGG - chr1_1:56537452-56537471 None:intergenic 20.0%
!! AAGGTAATTGTAATATATAC+TGG + chr1_1:56537711-56537730 Msa0030330:three_prime_UTR 20.0%
!!! TTATTCTAGAATTAATGGAC+TGG + chr1_1:56533682-56533701 Msa0030330:intron 25.0%
!!! TATTTTTTATGCTCTACAAG+AGG + chr1_1:56533712-56533731 Msa0030330:five_prime_UTR 25.0%
! ACAGTTAATATTGTACCTAT+TGG - chr1_1:56533822-56533841 None:intergenic 25.0%
! AATAGGTACAATATTAACTG+TGG + chr1_1:56533821-56533840 Msa0030330:CDS 25.0%
! ATTTAACTAGCAAGTAGAAA+CGG - chr1_1:56534070-56534089 None:intergenic 25.0%
!! AATTTAACGACAAATTTTCC+CGG - chr1_1:56534817-56534836 None:intergenic 25.0%
! AGCTGAAAATTCTATTAACA+AGG + chr1_1:56534877-56534896 Msa0030330:CDS 25.0%
! GATTTAAACTTGATACAACT+TGG + chr1_1:56535817-56535836 Msa0030330:CDS 25.0%
!! AACATCAAATCTAGAATAAG+AGG - chr1_1:56535979-56535998 None:intergenic 25.0%
!! AACTACAAAGTTGATTGAAA+TGG + chr1_1:56536491-56536510 Msa0030330:CDS 25.0%
!! ACTACAAAGTTGATTGAAAT+GGG + chr1_1:56536492-56536511 Msa0030330:CDS 25.0%
!!! CATTTTAAAAACAGGCAAAA+TGG + chr1_1:56536536-56536555 Msa0030330:CDS 25.0%
! TTGAGAAAATCAACAAGTAA+AGG - chr1_1:56536654-56536673 None:intergenic 25.0%
! AATACAAACACTTTCTACAT+TGG + chr1_1:56536923-56536942 Msa0030330:CDS 25.0%
!!! TTTATTGGAGATTTTGACTT+GGG + chr1_1:56537007-56537026 Msa0030330:CDS 25.0%
! CAAATATGAAAATCAGACAA+TGG - chr1_1:56537297-56537316 None:intergenic 25.0%
! TACTTTCATAGTAAATGATC+AGG + chr1_1:56537640-56537659 Msa0030330:three_prime_UTR 25.0%
! CTACAAGAGGATTGATTTAT+AGG + chr1_1:56533725-56533744 Msa0030330:five_prime_UTR 30.0%
! AGGTGTATAGATTTTTACCA+TGG + chr1_1:56533779-56533798 Msa0030330:exon 30.0%
! GTATAGATTTTTACCATGGT+AGG + chr1_1:56533783-56533802 Msa0030330:exon 30.0%
TATTGGAAAAGAGAGTTTCA+AGG + chr1_1:56533890-56533909 Msa0030330:CDS 30.0%
TCTTGAAGCAGATGTTAAAA+GGG + chr1_1:56534010-56534029 Msa0030330:CDS 30.0%
TGTTAAAAGGGCGAATAATA+TGG + chr1_1:56534022-56534041 Msa0030330:CDS 30.0%
!! AAAAGCCGAATTTGTTTTCT+TGG + chr1_1:56534433-56534452 Msa0030330:CDS 30.0%
GATAGAGAGATATGATTCAA+AGG + chr1_1:56534541-56534560 Msa0030330:CDS 30.0%
AAAGGAAAGAATTAAGAGGT+TGG - chr1_1:56534577-56534596 None:intergenic 30.0%
!!! ATTGAAGGTTGGTTTTATGA+TGG + chr1_1:56534668-56534687 Msa0030330:CDS 30.0%
! ACTTTGAAAGATGTTGTAGA+GGG + chr1_1:56534989-56535008 Msa0030330:CDS 30.0%
TCATGAATACTAAATCTCAG+TGG - chr1_1:56535060-56535079 None:intergenic 30.0%
!! CTTATTTCTATAAGCTCATC+CGG + chr1_1:56535591-56535610 Msa0030330:intron 30.0%
!! AGTTGTTTTCATAAGCTATC+CGG - chr1_1:56535613-56535632 None:intergenic 30.0%
ATATAATCTACTATGACCCT+AGG - chr1_1:56535714-56535733 None:intergenic 30.0%
ATCCAACACCAAATTAACTA+TGG - chr1_1:56535797-56535816 None:intergenic 30.0%
AAACTTGATACAACTTGGAA+AGG + chr1_1:56535822-56535841 Msa0030330:CDS 30.0%
! GGAATTGATTTCTTTGTTGA+TGG + chr1_1:56536072-56536091 Msa0030330:CDS 30.0%
! ATTTCTTTGTTGATGGAGAA+GGG + chr1_1:56536079-56536098 Msa0030330:CDS 30.0%
AAGAATTAGAGATACACCAT+TGG - chr1_1:56536256-56536275 None:intergenic 30.0%
! CGACAATGATAATGTACAAA+TGG + chr1_1:56536422-56536441 Msa0030330:CDS 30.0%
!!! CTTGTTGATTTTCTCAATAC+AGG + chr1_1:56536657-56536676 Msa0030330:CDS 30.0%
TTCCAATAGACAAAATGTTG+TGG - chr1_1:56536838-56536857 None:intergenic 30.0%
AACACTTTCTACATTGGTAT+TGG + chr1_1:56536929-56536948 Msa0030330:CDS 30.0%
AAATGCAATGAGACCTTTAT+TGG + chr1_1:56536992-56537011 Msa0030330:CDS 30.0%
CAAGTCAAAATCTCCAATAA+AGG - chr1_1:56537008-56537027 None:intergenic 30.0%
!!! CTTTATTGGAGATTTTGACT+TGG + chr1_1:56537006-56537025 Msa0030330:CDS 30.0%
!!! TTATTGGAGATTTTGACTTG+GGG + chr1_1:56537008-56537027 Msa0030330:CDS 30.0%
TTGACAGGCAGTAATATTTA+TGG + chr1_1:56537137-56537156 Msa0030330:CDS 30.0%
ACTAAGTTGTTCTTGGATAT+TGG + chr1_1:56537486-56537505 Msa0030330:three_prime_UTR 30.0%
! AGTGTTTTCTATTACTTGCA+AGG + chr1_1:56537617-56537636 Msa0030330:three_prime_UTR 30.0%
TCATAGTAAATGATCAGGAT+AGG + chr1_1:56537645-56537664 Msa0030330:three_prime_UTR 30.0%
TACAAAACCTCAAAAACAGA+AGG + chr1_1:56537692-56537711 Msa0030330:three_prime_UTR 30.0%
!!! ACAATTACCTTCTGTTTTTG+AGG - chr1_1:56537702-56537721 None:intergenic 30.0%
TGTATTACAATTACCTTGCA+GGG - chr1_1:56537746-56537765 None:intergenic 30.0%
TTGTATTACAATTACCTTGC+AGG - chr1_1:56537747-56537766 None:intergenic 30.0%
TAATTACCTTGCAGGTAATT+AGG + chr1_1:56537772-56537791 Msa0030330:three_prime_UTR 30.0%
! TTTGAAACTTCTGTGAGGTA+AGG + chr1_1:56533387-56533406 Msa0030330:five_prime_UTR 35.0%
TGTAACAATCTTGAAGAGAG+TGG - chr1_1:56533421-56533440 None:intergenic 35.0%
TTCCAGAGAAGAGATACAAT+TGG + chr1_1:56533755-56533774 Msa0030330:five_prime_UTR 35.0%
! GATTTTTACCATGGTAGGAT+TGG + chr1_1:56533788-56533807 Msa0030330:exon 35.0%
CTCTTGAAGCAGATGTTAAA+AGG + chr1_1:56534009-56534028 Msa0030330:CDS 35.0%
! TCTACTTGCTAGTTAAATGC+CGG + chr1_1:56534072-56534091 Msa0030330:CDS 35.0%
! ATTGTTGACAAGTTGAACCA+AGG + chr1_1:56534260-56534279 Msa0030330:CDS 35.0%
! TTCTTTTTCCTTCCTAATGC+TGG - chr1_1:56534393-56534412 None:intergenic 35.0%
AAAAAGAAGAAGCTGCGAAT+AGG + chr1_1:56534405-56534424 Msa0030330:CDS 35.0%
CTGCTCCAAGAAAACAAATT+CGG - chr1_1:56534441-56534460 None:intergenic 35.0%
! TCAATACTTTGAAAGGGTTC+AGG + chr1_1:56534517-56534536 Msa0030330:CDS 35.0%
! TTCTTGAAGATACTAGCTTG+AGG + chr1_1:56534720-56534739 Msa0030330:CDS 35.0%
! GTCTTTTGATAAGGTCTATC+CGG + chr1_1:56534795-56534814 Msa0030330:CDS 35.0%
! TCTTTTGATAAGGTCTATCC+GGG + chr1_1:56534796-56534815 Msa0030330:CDS 35.0%
AACAAGGATTGGATCTCTAT+TGG + chr1_1:56534893-56534912 Msa0030330:CDS 35.0%
ACAAGGATTGGATCTCTATT+GGG + chr1_1:56534894-56534913 Msa0030330:CDS 35.0%
! CACTTTGAAAGATGTTGTAG+AGG + chr1_1:56534988-56535007 Msa0030330:CDS 35.0%
! CTTTGAAAGATGTTGTAGAG+GGG + chr1_1:56534990-56535009 Msa0030330:CDS 35.0%
GGATCATATTATTTCGTGCT+TGG + chr1_1:56535194-56535213 Msa0030330:CDS 35.0%
AAGCAACTCTAACATTTCCA+AGG + chr1_1:56535218-56535237 Msa0030330:CDS 35.0%
TAACAAATCAATTGCTGCCT+TGG - chr1_1:56535238-56535257 None:intergenic 35.0%
TCACTTATATGTCAAGTCCT+AGG + chr1_1:56535694-56535713 Msa0030330:intron 35.0%
CACTTATATGTCAAGTCCTA+GGG + chr1_1:56535695-56535714 Msa0030330:intron 35.0%
ACCGGATTCAAGAATATCAA+TGG + chr1_1:56535765-56535784 Msa0030330:CDS 35.0%
GCCATTGATATTCTTGAATC+CGG - chr1_1:56535769-56535788 None:intergenic 35.0%
GGCAAAAGCCATAGTTAATT+TGG + chr1_1:56535786-56535805 Msa0030330:CDS 35.0%
!! AGCCATAGTTAATTTGGTGT+TGG + chr1_1:56535792-56535811 Msa0030330:CDS 35.0%
TTGATACAACTTGGAAAGGA+AGG + chr1_1:56535826-56535845 Msa0030330:CDS 35.0%
CCAGACATCATTTCTATCAA+AGG - chr1_1:56535862-56535881 None:intergenic 35.0%
CCTTTGATAGAAATGATGTC+TGG + chr1_1:56535859-56535878 Msa0030330:CDS 35.0%
TAGATTTGATGTTCTCTCCT+CGG + chr1_1:56535986-56536005 Msa0030330:CDS 35.0%
AGAAAGTTTCTCGAGGATTT+CGG - chr1_1:56536040-56536059 None:intergenic 35.0%
AAACTTTCTTCTTCTGACGA+TGG + chr1_1:56536051-56536070 Msa0030330:CDS 35.0%
! GATTTCTTTGTTGATGGAGA+AGG + chr1_1:56536078-56536097 Msa0030330:CDS 35.0%
!! AACTAGCAATTTGGTGATGA+TGG - chr1_1:56536124-56536143 None:intergenic 35.0%
CTGTTGCAAAACTAGCAATT+TGG - chr1_1:56536133-56536152 None:intergenic 35.0%
!! AATACCTTTTCAAGCCTAGA+AGG + chr1_1:56536367-56536386 Msa0030330:CDS 35.0%
! CTTTGTAGTTAGTTCTCGTT+CGG - chr1_1:56536481-56536500 None:intergenic 35.0%
! ACAAAGTTGATTGAAATGGG+AGG + chr1_1:56536495-56536514 Msa0030330:CDS 35.0%
TTGGAAATAACTGTGAGCTT+TGG - chr1_1:56536741-56536760 None:intergenic 35.0%
! ACAGTTATTTCCAAACCAAG+CGG + chr1_1:56536747-56536766 Msa0030330:CDS 35.0%
! GACCACAACATTTTGTCTAT+TGG + chr1_1:56536833-56536852 Msa0030330:CDS 35.0%
! TGTAACAGCTTTATCAAACC+AGG - chr1_1:56536873-56536892 None:intergenic 35.0%
GGTTTGATAAAGCTGTTACA+TGG + chr1_1:56536873-56536892 Msa0030330:CDS 35.0%
! GGTTTTTGTGTCAAAGGAAA+TGG + chr1_1:56537073-56537092 Msa0030330:CDS 35.0%
! TTTTGTGTCAAAGGAAATGG+TGG + chr1_1:56537076-56537095 Msa0030330:CDS 35.0%
! AAGGAAATGGTGGAATACTA+TGG + chr1_1:56537086-56537105 Msa0030330:CDS 35.0%
GGCAGTAATATTTATGGAGA+CGG + chr1_1:56537143-56537162 Msa0030330:CDS 35.0%
CATTGCTTGAACGTTATTCT+AGG + chr1_1:56537198-56537217 Msa0030330:CDS 35.0%
AGATGTCACTAAGTTGTTCT+TGG + chr1_1:56537479-56537498 Msa0030330:three_prime_UTR 35.0%
ATAAGTGAGAACACAGAAAG+AGG - chr1_1:56537588-56537607 None:intergenic 35.0%
ATTACCTGCAAGGTAATTAG+AGG - chr1_1:56537771-56537790 None:intergenic 35.0%
CTCACAGAAGTTTCAAACTG+TGG - chr1_1:56533384-56533403 None:intergenic 40.0%
! CACAGTTTGAAACTTCTGTG+AGG + chr1_1:56533382-56533401 Msa0030330:five_prime_UTR 40.0%
TGCCAATTGTATCTCTTCTC+TGG - chr1_1:56533760-56533779 None:intergenic 40.0%
AGAGAAGAGATACAATTGGC+AGG + chr1_1:56533759-56533778 Msa0030330:five_prime_UTR 40.0%
TATGAGTTCCAATCCTACCA+TGG - chr1_1:56533799-56533818 None:intergenic 40.0%
GGATTGGAACTCATACCAAT+AGG + chr1_1:56533804-56533823 Msa0030330:CDS 40.0%
!! GCACTGGCTCAATATCAAAT+AGG - chr1_1:56533929-56533948 None:intergenic 40.0%
TGATATTGAGCCAGTGCTAA+AGG + chr1_1:56533932-56533951 Msa0030330:CDS 40.0%
AGCTGTAATTCCTTTAGCAC+TGG - chr1_1:56533945-56533964 None:intergenic 40.0%
AGGAAGTTGAGCAAGTTACA+AGG + chr1_1:56534105-56534124 Msa0030330:CDS 40.0%
GGAAGTTGAGCAAGTTACAA+GGG + chr1_1:56534106-56534125 Msa0030330:CDS 40.0%
GAGCAAGTTACAAGGGATAT+CGG + chr1_1:56534113-56534132 Msa0030330:CDS 40.0%
AAGTTACAAGGGATATCGGA+AGG + chr1_1:56534117-56534136 Msa0030330:CDS 40.0%
GCTATCGAGAATTTCTGATC+AGG + chr1_1:56534175-56534194 Msa0030330:CDS 40.0%
!! GATCAGGTTGATAGACTACA+AGG + chr1_1:56534191-56534210 Msa0030330:CDS 40.0%
ACTACAAGGTGAGATGCAAA+GGG + chr1_1:56534205-56534224 Msa0030330:CDS 40.0%
GTTTCTGATCTCTTAGTCCT+TGG - chr1_1:56534280-56534299 None:intergenic 40.0%
AGGACTAAGAGATCAGAAAC+AGG + chr1_1:56534280-56534299 Msa0030330:CDS 40.0%
TTTCGCGAATGACATACTTG+AGG + chr1_1:56534310-56534329 Msa0030330:CDS 40.0%
ACATACTTGAGGAGATTGCA+AGG + chr1_1:56534321-56534340 Msa0030330:CDS 40.0%
CATACTTGAGGAGATTGCAA+GGG + chr1_1:56534322-56534341 Msa0030330:CDS 40.0%
! AACTCTTTTCCTATCTCGGA+TGG - chr1_1:56534368-56534387 None:intergenic 40.0%
ATCCGAGATAGGAAAAGAGT+TGG + chr1_1:56534367-56534386 Msa0030330:CDS 40.0%
CGGCAAAGGAAAGAATTAAG+AGG - chr1_1:56534581-56534600 None:intergenic 40.0%
TCTTTCCTTTGCCGCATAAA+CGG + chr1_1:56534587-56534606 Msa0030330:CDS 40.0%
TGTGAGAGATCAGCTATTGA+AGG + chr1_1:56534653-56534672 Msa0030330:CDS 40.0%
AGAGATCAGCTATTGAAGGT+TGG + chr1_1:56534657-56534676 Msa0030330:CDS 40.0%
AACTGATCCAGAAACACAAG+AGG + chr1_1:56534697-56534716 Msa0030330:CDS 40.0%
TCAAGAACCTCTTGTGTTTC+TGG - chr1_1:56534707-56534726 None:intergenic 40.0%
TCTTCGATCGATTGTCTTAG+TGG - chr1_1:56534755-56534774 None:intergenic 40.0%
TAAGACAATCGATCGAAGAG+TGG + chr1_1:56534756-56534775 Msa0030330:CDS 40.0%
CAAGGATTGGATCTCTATTG+GGG + chr1_1:56534895-56534914 Msa0030330:CDS 40.0%
ATACCGTTATCTCGATCCTT+GGG + chr1_1:56534927-56534946 Msa0030330:CDS 40.0%
CATCTTCACTTCTCTGTCAT+TGG - chr1_1:56534957-56534976 None:intergenic 40.0%
ATATGTCAAACCTGCAATCG+CGG + chr1_1:56535104-56535123 Msa0030330:intron 40.0%
GAGAAATTGGCTGAATCACA+AGG + chr1_1:56535168-56535187 Msa0030330:CDS 40.0%
AATTGGCTGAATCACAAGGA+TGG + chr1_1:56535172-56535191 Msa0030330:CDS 40.0%
ATTGGCTGAATCACAAGGAT+GGG + chr1_1:56535173-56535192 Msa0030330:CDS 40.0%
GAGTTGCTTCAAGAAAGATC+TGG + chr1_1:56535261-56535280 Msa0030330:CDS 40.0%
TGCTTCAAGAAAGATCTGGT+TGG + chr1_1:56535265-56535284 Msa0030330:CDS 40.0%
TAACCTTGTAACCCTTGTGA+AGG + chr1_1:56535335-56535354 Msa0030330:CDS 40.0%
! GGTGGCGAAGAAAATTTTGA+TGG + chr1_1:56535380-56535399 Msa0030330:CDS 40.0%
ATTGTCACTGCTGCTAATTG+TGG + chr1_1:56535429-56535448 Msa0030330:CDS 40.0%
AAGGGAATTATTGCTTCCTC+CGG + chr1_1:56535946-56535965 Msa0030330:CDS 40.0%
TAGAATAAGAGGAACACCTC+CGG - chr1_1:56535968-56535987 None:intergenic 40.0%
CAGAAGAAGAAAGTTTCTCG+AGG - chr1_1:56536047-56536066 None:intergenic 40.0%
TTGCAACAGAATTCCAACTC+AGG + chr1_1:56536144-56536163 Msa0030330:CDS 40.0%
AAAGCAATTCTTGCAGCCAA+TGG + chr1_1:56536237-56536256 Msa0030330:CDS 40.0%
GAGTCAGAATCATCAAGAAG+TGG - chr1_1:56536279-56536298 None:intergenic 40.0%
AGGTATTCAACTACTCCTTC+TGG - chr1_1:56536354-56536373 None:intergenic 40.0%
! ATCAAAGCTTCTAGCCTTCT+AGG - chr1_1:56536384-56536403 None:intergenic 40.0%
! AGAAGGCTAGAAGCTTTGAT+TGG + chr1_1:56536384-56536403 Msa0030330:CDS 40.0%
!! GTTAGTTCTCGTTCGGATTT+TGG - chr1_1:56536474-56536493 None:intergenic 40.0%
TACAGGTTCAATCACTGCAA+AGG + chr1_1:56536674-56536693 Msa0030330:CDS 40.0%
CTATCATGAGCTGCACATAA+AGG - chr1_1:56536801-56536820 None:intergenic 40.0%
TTGGAAGCAAATGCTTTACC+TGG + chr1_1:56536852-56536871 Msa0030330:CDS 40.0%
GATAAAGCTGTTACATGGTG+AGG + chr1_1:56536878-56536897 Msa0030330:CDS 40.0%
TCACTTAAGGCAGAAGCTTT+AGG + chr1_1:56537038-56537057 Msa0030330:CDS 40.0%
!!! AGCTTTAGGACTTTTGGAGA+AGG + chr1_1:56537052-56537071 Msa0030330:CDS 40.0%
! GGAGAAGGTTTTTGTGTCAA+AGG + chr1_1:56537067-56537086 Msa0030330:CDS 40.0%
!! TCGCGTTTGATTTGTTTGAC+AGG + chr1_1:56537122-56537141 Msa0030330:CDS 40.0%
TCTTCATCATCTGCAATCTC+TGG + chr1_1:56537221-56537240 Msa0030330:CDS 40.0%
!!! ATCTGCAATCTCTGGAGTTT+TGG + chr1_1:56537229-56537248 Msa0030330:CDS 40.0%
!!! GAGTTTTGGAGTGAAACTCT+AGG + chr1_1:56537243-56537262 Msa0030330:exon 40.0%
GAAACTCTAGGCCATAAAGT+CGG + chr1_1:56537255-56537274 Msa0030330:exon 40.0%
GCAAATCTGTTCCGACTTTA+TGG - chr1_1:56537269-56537288 None:intergenic 40.0%
AACGTTAAAGCTCTCGAAGA+AGG + chr1_1:56537362-56537381 Msa0030330:three_prime_UTR 40.0%
GTAGAATCACACGACTAGAT+AGG - chr1_1:56537388-56537407 None:intergenic 40.0%
TTGTTCTTGGATATTGGCGT+CGG + chr1_1:56537492-56537511 Msa0030330:three_prime_UTR 40.0%
CAAACCTCTAATTACCTTGC+AGG + chr1_1:56537764-56537783 Msa0030330:three_prime_UTR 40.0%
CGTAAACCTAATTACCTGCA+AGG - chr1_1:56537781-56537800 None:intergenic 40.0%
CATGAGCAGTTCTCAAGACT+TGG - chr1_1:56533854-56533873 None:intergenic 45.0%
GCAGCAGCTGATGTTCTTAT+TGG + chr1_1:56533873-56533892 Msa0030330:CDS 45.0%
! GTTGAGAAGTACAAGAACCG+TGG + chr1_1:56534044-56534063 Msa0030330:CDS 45.0%
TTGCTCAACTTCCTCGACAA+TGG - chr1_1:56534099-56534118 None:intergenic 45.0%
GACTACAAGGTGAGATGCAA+AGG + chr1_1:56534204-56534223 Msa0030330:CDS 45.0%
AAGAGATCAGAAACAGGACC+AGG + chr1_1:56534286-56534305 Msa0030330:CDS 45.0%
! GGCCAACTCTTTTCCTATCT+CGG - chr1_1:56534372-56534391 None:intergenic 45.0%
GAAAAGAGTTGGCCAGCATT+AGG + chr1_1:56534378-56534397 Msa0030330:CDS 45.0%
CCATAACAGCTCCGTTTATG+CGG - chr1_1:56534601-56534620 None:intergenic 45.0%
CACATGTAGTTCCTGTGGAA+AGG - chr1_1:56534637-56534656 None:intergenic 45.0%
TCTCTCACATGTAGTTCCTG+TGG - chr1_1:56534642-56534661 None:intergenic 45.0%
CAGCTATTAGAGCCTGCATT+TGG - chr1_1:56534862-56534881 None:intergenic 45.0%
GATACCGTTATCTCGATCCT+TGG + chr1_1:56534926-56534945 Msa0030330:CDS 45.0%
CTTCCCAAGGATCGAGATAA+CGG - chr1_1:56534933-56534952 None:intergenic 45.0%
TATGTCAAACCTGCAATCGC+GGG + chr1_1:56535105-56535124 Msa0030330:intron 45.0%
TCGCATGATTCGAGGTAAGA+AGG + chr1_1:56535473-56535492 Msa0030330:intron 45.0%
ATCCTGCTTCTTCTCTTCTC+AGG + chr1_1:56535742-56535761 Msa0030330:intron 45.0%
AGACCTTTCTTTATCAGCCC+TGG + chr1_1:56535897-56535916 Msa0030330:CDS 45.0%
GACCTTTCTTTATCAGCCCT+GGG + chr1_1:56535898-56535917 Msa0030330:CDS 45.0%
TACCCAGGGCTGATAAAGAA+AGG - chr1_1:56535903-56535922 None:intergenic 45.0%
! AGATCCAGCTAGTTTACCCA+GGG - chr1_1:56535917-56535936 None:intergenic 45.0%
AGCTGGATCTCATGCTAACA+AGG + chr1_1:56535927-56535946 Msa0030330:CDS 45.0%
GCTGGATCTCATGCTAACAA+GGG + chr1_1:56535928-56535947 Msa0030330:CDS 45.0%
GTAATGAATGACCTTGTCCG+AGG - chr1_1:56536006-56536025 None:intergenic 45.0%
! TTGCAAGTTCGAGACTGGTT+TGG + chr1_1:56536209-56536228 Msa0030330:CDS 45.0%
GCAGGTTTATAGCAGTCTCT+CGG - chr1_1:56536308-56536327 None:intergenic 45.0%
GCTGAGAGAAAAGAAAGAGC+AGG - chr1_1:56536326-56536345 None:intergenic 45.0%
TTCTCTCAGCATGAACCAGA+AGG + chr1_1:56536336-56536355 Msa0030330:CDS 45.0%
! CTAGCCTTCTAGGCTTGAAA+AGG - chr1_1:56536374-56536393 None:intergenic 45.0%
TATCATTGTCGTCGTTCTCG+AGG - chr1_1:56536413-56536432 None:intergenic 45.0%
AATGTACAAATGGCTGCAGC+TGG + chr1_1:56536432-56536451 Msa0030330:CDS 45.0%
!! GTTCTCGTTCGGATTTTGGT+AGG - chr1_1:56536470-56536489 None:intergenic 45.0%
CGCTGTGACTCGATATTTGT+AGG - chr1_1:56536606-56536625 None:intergenic 45.0%
GCAATTGCAGCAGCTTTCAT+CGG + chr1_1:56536696-56536715 Msa0030330:CDS 45.0%
TTGAAAAACCAGCAACCGCT+TGG - chr1_1:56536765-56536784 None:intergenic 45.0%
TTGGGGTAGTGAGTCACTTA+AGG + chr1_1:56537025-56537044 Msa0030330:CDS 45.0%
!!! GGCAGAAGCTTTAGGACTTT+TGG + chr1_1:56537046-56537065 Msa0030330:CDS 45.0%
GGTGGAATACTATGGAACGA+CGG + chr1_1:56537094-56537113 Msa0030330:CDS 45.0%
CCTTAGCAGCTTTCCTTCTA+AGG - chr1_1:56537172-56537191 None:intergenic 45.0%
CCTTAGAAGGAAAGCTGCTA+AGG + chr1_1:56537169-56537188 Msa0030330:CDS 45.0%
!! CTGGCTTATTTTTCCCTGCA+AGG + chr1_1:56537730-56537749 Msa0030330:three_prime_UTR 45.0%
!! GACTCTAGAGCAACTCTAGC+AGG - chr1_1:56533990-56534009 None:intergenic 50.0%
CTAGCAAGTAGAAACGGCCA+CGG - chr1_1:56534064-56534083 None:intergenic 50.0%
TAAATGCCGGTCCATTGTCG+AGG + chr1_1:56534085-56534104 Msa0030330:CDS 50.0%
CAACTTCCTCGACAATGGAC+CGG - chr1_1:56534094-56534113 None:intergenic 50.0%
AAGGGATATCGGAAGGTCTC+TGG + chr1_1:56534124-56534143 Msa0030330:CDS 50.0%
GATGCAAAGGGTTGAGTTCG+AGG + chr1_1:56534217-56534236 Msa0030330:CDS 50.0%
GTATGTCATTCGCGAAAGCC+TGG - chr1_1:56534307-56534326 None:intergenic 50.0%
AGAGTTGGCCAGCATTAGGA+AGG + chr1_1:56534382-56534401 Msa0030330:CDS 50.0%
!! TCTCTAGAGCTGATGCAGCA+AGG + chr1_1:56534474-56534493 Msa0030330:CDS 50.0%
!! CTCTAGAGCTGATGCAGCAA+GGG + chr1_1:56534475-56534494 Msa0030330:CDS 50.0%
CCGCATAAACGGAGCTGTTA+TGG + chr1_1:56534598-56534617 Msa0030330:CDS 50.0%
!! GATCCTGTTAGCCTTTCCAC+AGG + chr1_1:56534623-56534642 Msa0030330:CDS 50.0%
GTTCCTGTGGAAAGGCTAAC+AGG - chr1_1:56534629-56534648 None:intergenic 50.0%
AGAATCCCTGAGCCAAATGC+AGG + chr1_1:56534847-56534866 Msa0030330:CDS 50.0%
! TAGAGCCTGCATTTGGCTCA+GGG - chr1_1:56534855-56534874 None:intergenic 50.0%
! TTAGAGCCTGCATTTGGCTC+AGG - chr1_1:56534856-56534875 None:intergenic 50.0%
GGATTGGATCTCTATTGGGG+AGG + chr1_1:56534898-56534917 Msa0030330:CDS 50.0%
CTCTGTCATTGGACTTCCCA+AGG - chr1_1:56534946-56534965 None:intergenic 50.0%
! AGAGGGGCATGCAAGAAACA+AGG + chr1_1:56535006-56535025 Msa0030330:CDS 50.0%
ATGTCAAACCTGCAATCGCG+GGG + chr1_1:56535106-56535125 Msa0030330:intron 50.0%
AAATTAGTCCCCGCGATTGC+AGG - chr1_1:56535117-56535136 None:intergenic 50.0%
GGTCCTTCACAAGGGTTACA+AGG - chr1_1:56535341-56535360 None:intergenic 50.0%
GTTTCCAGGGTCCTTCACAA+GGG - chr1_1:56535349-56535368 None:intergenic 50.0%
CCTCTGCTGAATCGTTTCCA+GGG - chr1_1:56535362-56535381 None:intergenic 50.0%
ACCTCTGCTGAATCGTTTCC+AGG - chr1_1:56535363-56535382 None:intergenic 50.0%
TGGAAACGATTCAGCAGAGG+TGG + chr1_1:56535362-56535381 Msa0030330:CDS 50.0%
TCACTGCTGCTAATTGTGGC+TGG + chr1_1:56535433-56535452 Msa0030330:CDS 50.0%
CGAATCATGCGATCAGCTAG+TGG - chr1_1:56535465-56535484 None:intergenic 50.0%
CTAGCTGATCGCATGATTCG+AGG + chr1_1:56535465-56535484 Msa0030330:CDS 50.0%
GTCCTGAGAAGAGAAGAAGC+AGG - chr1_1:56535747-56535766 None:intergenic 50.0%
GCTTCTTCTCTTCTCAGGAC+CGG + chr1_1:56535747-56535766 Msa0030330:intron 50.0%
! GAGATCCAGCTAGTTTACCC+AGG - chr1_1:56535918-56535937 None:intergenic 50.0%
GGAATTATTGCTTCCTCCGG+AGG + chr1_1:56535949-56535968 Msa0030330:CDS 50.0%
AATAAGAGGAACACCTCCGG+AGG - chr1_1:56535965-56535984 None:intergenic 50.0%
TGATGTTCTCTCCTCGGACA+AGG + chr1_1:56535992-56536011 Msa0030330:CDS 50.0%
ACGAAGGTTGTGACCTGAGT+TGG - chr1_1:56536160-56536179 None:intergenic 50.0%
GGCATTTGCAAGTTCGAGAC+TGG + chr1_1:56536204-56536223 Msa0030330:CDS 50.0%
TATCGAGTCACAGCGCGATT+TGG + chr1_1:56536611-56536630 Msa0030330:CDS 50.0%
!! CAGCGCGATTTGGTTAAACG+CGG + chr1_1:56536621-56536640 Msa0030330:CDS 50.0%
TTTCCAAACCAAGCGGTTGC+TGG + chr1_1:56536754-56536773 Msa0030330:CDS 50.0%
AAACCAGCAACCGCTTGGTT+TGG - chr1_1:56536760-56536779 None:intergenic 50.0%
!! TATTGGAAGAGCATCCGCAG+AGG + chr1_1:56536946-56536965 Msa0030330:CDS 50.0%
!! ATTGGAAGAGCATCCGCAGA+GGG + chr1_1:56536947-56536966 Msa0030330:CDS 50.0%
ATGGAGACGGACACCTTAGA+AGG + chr1_1:56537156-56537175 Msa0030330:CDS 50.0%
GAGGAGATTGCAAGGGCAGT+TGG + chr1_1:56534329-56534348 Msa0030330:CDS 55.0%
CCTATCTCGGATGGTTCCAC+CGG - chr1_1:56534359-56534378 None:intergenic 55.0%
CAGCTCCGTTTATGCGGCAA+AGG - chr1_1:56534595-56534614 None:intergenic 55.0%
GTAACCCTTGTGAAGGACCC+TGG + chr1_1:56535342-56535361 Msa0030330:CDS 55.0%
CGTTTCCAGGGTCCTTCACA+AGG - chr1_1:56535350-56535369 None:intergenic 55.0%
CCCTGGAAACGATTCAGCAG+AGG + chr1_1:56535359-56535378 Msa0030330:CDS 55.0%
TCAGCCCTGGGTAAACTAGC+TGG + chr1_1:56535910-56535929 Msa0030330:CDS 55.0%
!! CACGTAGCGTTGGCTTACGA+AGG - chr1_1:56536176-56536195 None:intergenic 55.0%
! CCAAGAAGAGCACGTAGCGT+TGG - chr1_1:56536186-56536205 None:intergenic 55.0%
CCAACGCTACGTGCTCTTCT+TGG + chr1_1:56536183-56536202 Msa0030330:CDS 55.0%
ACGCTCTCAGTGCACTCTTC+AGG + chr1_1:56536571-56536590 Msa0030330:CDS 55.0%
!! TTGGAAGAGCATCCGCAGAG+GGG + chr1_1:56536948-56536967 Msa0030330:CDS 55.0%
AACAAACGAGCACCCCTCTG+CGG - chr1_1:56536963-56536982 None:intergenic 55.0%
CCGGTGGAACCATCCGAGAT+AGG + chr1_1:56534356-56534375 Msa0030330:CDS 60.0%
TGCAAGGGCAGTTGGCGTGC+CGG + chr1_1:56534337-56534356 Msa0030330:CDS 65.0%
AAGGGCAGTTGGCGTGCCGG+TGG + chr1_1:56534340-56534359 Msa0030330:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 56533345 56537800 56533345 ID=Msa0030330;Name=Msa0030330
chr1_1 mRNA 56533345 56537800 56533345 ID=Msa0030330-mRNA-1;Parent=Msa0030330;Name=Msa0030330-mRNA-1;_AED=0.00;_eAED=0.00;_QI=152|1|1|1|0.66|0.5|4|544|1013
chr1_1 exon 56533345 56533408 56533345 ID=Msa0030330-mRNA-1:exon:16951;Parent=Msa0030330-mRNA-1
chr1_1 exon 56533710 56535027 56533710 ID=Msa0030330-mRNA-1:exon:16952;Parent=Msa0030330-mRNA-1
chr1_1 exon 56535168 56535486 56535168 ID=Msa0030330-mRNA-1:exon:16953;Parent=Msa0030330-mRNA-1
chr1_1 exon 56535764 56537800 56535764 ID=Msa0030330-mRNA-1:exon:16954;Parent=Msa0030330-mRNA-1
chr1_1 five_prime_UTR 56533345 56533408 56533345 ID=Msa0030330-mRNA-1:five_prime_utr;Parent=Msa0030330-mRNA-1
chr1_1 five_prime_UTR 56533710 56533797 56533710 ID=Msa0030330-mRNA-1:five_prime_utr;Parent=Msa0030330-mRNA-1
chr1_1 CDS 56533798 56535027 56533798 ID=Msa0030330-mRNA-1:cds;Parent=Msa0030330-mRNA-1
chr1_1 CDS 56535168 56535486 56535168 ID=Msa0030330-mRNA-1:cds;Parent=Msa0030330-mRNA-1
chr1_1 CDS 56535764 56537256 56535764 ID=Msa0030330-mRNA-1:cds;Parent=Msa0030330-mRNA-1
chr1_1 three_prime_UTR 56537257 56537800 56537257 ID=Msa0030330-mRNA-1:three_prime_utr;Parent=Msa0030330-mRNA-1
Gene Sequence

>Msa0030330

ATGGTAGGATTGGAACTCATACCAATAGGTACAATATTAACTGTGGTAACAAGCCAAGTCTTGAGAACTGCTCATGCAGCAGCTGATGTTCTTATTGGAAAAGAGAGTTTCAAGGCACTTTCGAAATACCTATTTGATATTGAGCCAGTGCTAAAGGAATTACAGCTTCAAGAATTGAATGATTCTCAACCTGCTAGAGTTGCTCTAGAGTCTCTTGAAGCAGATGTTAAAAGGGCGAATAATATGGTTGAGAAGTACAAGAACCGTGGCCGTTTCTACTTGCTAGTTAAATGCCGGTCCATTGTCGAGGAAGTTGAGCAAGTTACAAGGGATATCGGAAGGTCTCTGGCTGCACTGTCTATTGCAAATACTGAAGTGCTATCGAGAATTTCTGATCAGGTTGATAGACTACAAGGTGAGATGCAAAGGGTTGAGTTCGAGGCTTCACAGTCTCAGCTTGAAATTGTTGACAAGTTGAACCAAGGACTAAGAGATCAGAAACAGGACCAGGCTTTCGCGAATGACATACTTGAGGAGATTGCAAGGGCAGTTGGCGTGCCGGTGGAACCATCCGAGATAGGAAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTGCGAATAGGAAAGAAAAAGCCGAATTTGTTTTCTTGGAGCAGATCATTAAGTTACTCTCTAGAGCTGATGCAGCAAGGGATTATGAAGAAGTTAAGAATCAATACTTTGAAAGGGTTCAGGTGATAGAGAGATATGATTCAAAGGAAAAATATATCCAACCTCTTAATTCTTTCCTTTGCCGCATAAACGGAGCTGTTATGGTTGATCCTGTTAGCCTTTCCACAGGAACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGAAACAGAACTGATCCAGAAACACAAGAGGTTCTTGAAGATACTAGCTTGAGGTCAAACATTCCACTAAGACAATCGATCGAAGAGTGGAGAGAACTCAATTATTGTCTTTTGATAAGGTCTATCCGGGAAAATTTGTCGTTAAATTCTGATCTGAAAGAATCCCTGAGCCAAATGCAGGCTCTAATAGCTGAAAATTCTATTAACAAGGATTGGATCTCTATTGGGGAGGTTACTGATACCGTTATCTCGATCCTTGGGAAGTCCAATGACAGAGAAGTGAAGATGAAGATTTTGATCACTTTGAAAGATGTTGTAGAGGGGCATGCAAGAAACAAGGAGAAATTGGCTGAATCACAAGGATGGGATCATATTATTTCGTGCTTGGAAAGCAACTCTAACATTTCCAAGGCAGCAATTGATTTGTTATATGAGTTGCTTCAAGAAAGATCTGGTTGGAATCAATGTTTTTGCAAAAAACTTTCTGAGAACGACACTGCAGTTCTTAACCTTGTAACCCTTGTGAAGGACCCTGGAAACGATTCAGCAGAGGTGGCGAAGAAAATTTTGATGGAGCTTTTTGAAATAAATGAAAGCAGCATTGTCACTGCTGCTAATTGTGGCTGGTATAAGCCACTAGCTGATCGCATGATTCGAGGACCGGATTCAAGAATATCAATGGCAAAAGCCATAGTTAATTTGGTGTTGGATGATTTAAACTTGATACAACTTGGAAAGGAAGGAGTTATAACTCCTTTGATAGAAATGATGTCTGGCAGTATCGAGTCGAAAGACCTTTCTTTATCAGCCCTGGGTAAACTAGCTGGATCTCATGCTAACAAGGGAATTATTGCTTCCTCCGGAGGTGTTCCTCTTATTCTAGATTTGATGTTCTCTCCTCGGACAAGGTCATTCATTACAATTAAATGCTCCGAAATCCTCGAGAAACTTTCTTCTTCTGACGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATCATCACCAAATTGCTAGTTTTGCAACAGAATTCCAACTCAGGTCACAACCTTCGTAAGCCAACGCTACGTGCTCTTCTTGGCATTTGCAAGTTCGAGACTGGTTTGGTGAAGAAAGCAATTCTTGCAGCCAATGGTGTATCTCTAATTCTTCCACTTCTTGATGATTCTGACTCAGAAGTCCGAGAGACTGCTATAAACCTGCTCTTTCTTTTCTCTCAGCATGAACCAGAAGGAGTAGTTGAATACCTTTTCAAGCCTAGAAGGCTAGAAGCTTTGATTGGATTCCTCGAGAACGACGACAATGATAATGTACAAATGGCTGCAGCTGGCTTACTAGCTAACCTACCAAAATCCGAACGAGAACTAACTACAAAGTTGATTGAAATGGGAGGACTTGATGCAATCATAAGCATTTTAAAAACAGGCAAAATGGAAGCAAAAGAAAACGCTCTCAGTGCACTCTTCAGGTTCACAGATCCTACAAATATCGAGTCACAGCGCGATTTGGTTAAACGCGGAATATATCCTTTACTTGTTGATTTTCTCAATACAGGTTCAATCACTGCAAAGGCAATTGCAGCAGCTTTCATCGGCGATCTTTCTATGAGCACACCAAAGCTCACAGTTATTTCCAAACCAAGCGGTTGCTGGTTTTTCAAATCATCGCGCGTTCCTTTATGTGCAGCTCATGATAGCGTATGCAGTGTGACCACAACATTTTGTCTATTGGAAGCAAATGCTTTACCTGGTTTGATAAAGCTGTTACATGGTGAGGTTCATGCAACTGCTTATGAAGCAATACAAACACTTTCTACATTGGTATTGGAAGAGCATCCGCAGAGGGGTGCTCGTTTGTTGCATGAGAAAAATGCAATGAGACCTTTATTGGAGATTTTGACTTGGGGTAGTGAGTCACTTAAGGCAGAAGCTTTAGGACTTTTGGAGAAGGTTTTTGTGTCAAAGGAAATGGTGGAATACTATGGAACGACGGCTAGATCGCGTTTGATTTGTTTGACAGGCAGTAATATTTATGGAGACGGACACCTTAGAAGGAAAGCTGCTAAGGTATTGTCATTGCTTGAACGTTATTCTAGGTCTTCATCATCTGCAATCTCTGGAGTTTTGGAGTGA
Protein sequence

>Msa0030330

MVGLELIPIGTILTVVTSQVLRTAHAAADVLIGKESFKALSKYLFDIEPVLKELQLQELNDSQPARVALESLEADVKRANNMVEKYKNRGRFYLLVKCRSIVEEVEQVTRDIGRSLAALSIANTEVLSRISDQVDRLQGEMQRVEFEASQSQLEIVDKLNQGLRDQKQDQAFANDILEEIARAVGVPVEPSEIGKELASIRKEKEEAANRKEKAEFVFLEQIIKLLSRADAARDYEEVKNQYFERVQVIERYDSKEKYIQPLNSFLCRINGAVMVDPVSLSTGTTCERSAIEGWFYDGNRTDPETQEVLEDTSLRSNIPLRQSIEEWRELNYCLLIRSIRENLSLNSDLKESLSQMQALIAENSINKDWISIGEVTDTVISILGKSNDREVKMKILITLKDVVEGHARNKEKLAESQGWDHIISCLESNSNISKAAIDLLYELLQERSGWNQCFCKKLSENDTAVLNLVTLVKDPGNDSAEVAKKILMELFEINESSIVTAANCGWYKPLADRMIRGPDSRISMAKAIVNLVLDDLNLIQLGKEGVITPLIEMMSGSIESKDLSLSALGKLAGSHANKGIIASSGGVPLILDLMFSPRTRSFITIKCSEILEKLSSSDDGIDFFVDGEGKQLELDSIITKLLVLQQNSNSGHNLRKPTLRALLGICKFETGLVKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGFLENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSITAKAIAAAFIGDLSMSTPKLTVISKPSGCWFFKSSRVPLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEAIQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGSESLKAEALGLLEKVFVSKEMVEYYGTTARSRLICLTGSNIYGDGHLRRKAAKVLSLLERYSRSSSSAISGVLE*