AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0170460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170460 MtrunA17_Chr1g0188041 97.631 1013 24 0 1 1013 1 1013 0.0 2013
Msa0170460 MtrunA17_Chr7g0275961 28.854 1012 668 19 18 1005 16 999 9.37e-113 372
Msa0170460 MtrunA17_Chr8g0346441 28.306 1021 682 20 8 1005 11 1004 5.46e-109 362
Msa0170460 MtrunA17_Chr1g0166171 68.027 147 46 1 587 733 6 151 2.13e-56 192
Msa0170460 MtrunA17_Chr3g0144071 26.667 795 512 33 258 999 26 802 1.71e-46 180
Msa0170460 MtrunA17_Chr3g0084371 28.031 635 402 18 392 1005 231 831 1.69e-44 174
Msa0170460 MtrunA17_Chr1g0166121 71.014 69 20 0 96 164 1 69 5.36e-24 97.4
Msa0170460 MtrunA17_Chr1g0199321 21.997 591 384 15 32 600 31 566 1.87e-17 87.4
Msa0170460 MtrunA17_Chr4g0031431 23.629 529 347 17 91 600 84 574 1.70e-13 74.7
Msa0170460 MtrunA17_Chr7g0275081 38.202 89 55 0 239 327 56 144 1.17e-12 71.6
Msa0170460 MtrunA17_Chr4g0044411 25.360 347 219 10 265 600 277 594 9.48e-12 69.3
Msa0170460 MtrunA17_Chr5g0413681 23.729 295 206 6 47 331 65 350 6.49e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170460 AT1G76390.1 27.464 761 471 29 264 965 28 766 4.81e-38 154
Msa0170460 AT1G76390.2 27.464 761 471 29 264 965 28 766 4.81e-38 154
Msa0170460 AT1G20780.1 26.959 753 487 29 264 968 26 763 5.26e-37 150
Msa0170460 AT1G20780.2 26.959 753 487 29 264 968 26 763 5.26e-37 150
Msa0170460 AT1G20780.3 26.959 753 487 29 264 968 26 763 5.26e-37 150
Msa0170460 AT1G68940.1 23.258 1062 697 33 35 999 37 1077 1.60e-34 143
Msa0170460 AT1G68940.2 23.202 1043 685 32 35 982 37 1058 1.16e-33 140
Msa0170460 AT1G68940.3 25.131 764 508 26 261 973 246 996 3.77e-31 132
Msa0170460 AT3G46510.1 22.978 544 343 22 85 600 80 575 5.23e-12 70.5
Msa0170460 AT1G71020.2 24.932 369 227 12 265 614 99 436 6.82e-12 69.7
Msa0170460 AT1G71020.1 24.932 369 227 12 265 614 247 584 9.73e-12 69.7
Msa0170460 AT3G54790.3 24.643 280 179 10 70 347 67 316 1.00e-11 69.7
Msa0170460 AT3G54790.1 24.643 280 179 10 70 347 67 316 1.00e-11 69.7
Msa0170460 AT3G52450.1 30.496 141 81 2 265 388 11 151 1.74e-11 68.2
Msa0170460 AT3G54790.2 24.643 280 179 10 70 347 31 280 1.77e-11 68.9
Msa0170460 AT2G23140.1 29.213 178 110 3 154 331 142 303 3.23e-11 68.2
Msa0170460 AT2G23140.2 29.213 178 110 3 154 331 139 300 3.45e-11 68.2
Msa0170460 AT2G23140.4 29.213 178 110 3 154 331 139 300 3.45e-11 68.2

Find 237 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGAACCTCTTGTGTTTC+TGG 0.059826 1_4:-54538174 None:intergenic
GCAAATCTGTTCCGACTTTA+TGG 0.111568 1_4:-54540742 None:intergenic
GCAGCAGCTGATGTTCTTAT+TGG 0.181583 1_4:+54537343 Msa0170460:CDS
CTACAAGAGGATTGATTTAT+AGG 0.186849 1_4:+54537195 Msa0170460:five_prime_UTR
GGCAAAAGCCATAGTTAATT+TGG 0.187215 1_4:+54539262 Msa0170460:CDS
TTAATTTACATTTAAGAATT+AGG 0.197480 1_4:-54541002 None:intergenic
GGCAGAAGCTTTAGGACTTT+TGG 0.205522 1_4:+54540522 Msa0170460:CDS
CCTTAGCAGCTTTCCTTCTA+AGG 0.210627 1_4:-54540645 None:intergenic
AAATGCAATGAGACCTTTAT+TGG 0.217381 1_4:+54540468 Msa0170460:CDS
TTGACCGGCAGTAATATTTA+TGG 0.222346 1_4:+54540613 Msa0170460:CDS
CATCTTCACTTCTCTGTCAT+TGG 0.229854 1_4:-54538424 None:intergenic
TAATTACCTTGCAGGTAATT+AGG 0.233404 1_4:+54541248 Msa0170460:three_prime_UTR
CTGTTGCAAAACTAGCAATT+TGG 0.235539 1_4:-54539606 None:intergenic
GTTAGTTCTCGTTCGGATTT+TGG 0.239898 1_4:-54539947 None:intergenic
ATCAAAGCTTCTAGCCTTCT+AGG 0.241589 1_4:-54539857 None:intergenic
ACCTCTGCTGAATCGTTTCC+AGG 0.248782 1_4:-54538830 None:intergenic
ATCTGCAATCTCTGGAGTTT+TGG 0.262837 1_4:+54540705 Msa0170460:CDS
CTCTTGAAGCAGATGTTAAA+AGG 0.268785 1_4:+54537479 Msa0170460:CDS
CATTGCTTGAACGTTATTCT+AGG 0.272811 1_4:+54540674 Msa0170460:CDS
AGATGTCACTAAGTTGTTCT+TGG 0.287307 1_4:+54540955 Msa0170460:three_prime_UTR
AACAAGGATTGGATCTCTAT+TGG 0.289337 1_4:+54538363 Msa0170460:CDS
TCACTTAAGGCAGAAGCTTT+AGG 0.292250 1_4:+54540514 Msa0170460:CDS
ACAAATTAATCTTTCAAGTT+AGG 0.305712 1_4:-54540883 None:intergenic
CCAACGCTACGTGCTCTTCT+TGG 0.306871 1_4:+54539659 Msa0170460:CDS
TCTTCGATCGATTGTCTTAG+TGG 0.313992 1_4:-54538222 None:intergenic
ACTAAGTTGTTCTTGGATAT+TGG 0.321575 1_4:+54540962 Msa0170460:three_prime_UTR
CCGCATAAACGGAGCTGTTA+TGG 0.327966 1_4:+54538068 Msa0170460:CDS
ACAAGGATTGGATCTCTATT+GGG 0.328260 1_4:+54538364 Msa0170460:CDS
ATTACCTGCAAGGTAATTAG+AGG 0.336307 1_4:-54541244 None:intergenic
AGAAAGTTTCTCGAGGATTT+CGG 0.337226 1_4:-54539513 None:intergenic
GAGCAAGTTACAAGGGATAT+TGG 0.344883 1_4:+54537583 Msa0170460:CDS
TATCGAGTCACAGCGCGATT+TGG 0.345338 1_4:+54540087 Msa0170460:CDS
AACTACAAAGTTGATTGAAA+TGG 0.346902 1_4:+54539967 Msa0170460:CDS
ACGCTCTCAGTGCACTCTTC+AGG 0.348203 1_4:+54540047 Msa0170460:CDS
TTGTATTACAATTACCTTGC+AGG 0.352064 1_4:-54541220 None:intergenic
TGTTAAAAGGGCGAATAATA+TGG 0.357230 1_4:+54537492 Msa0170460:CDS
AACACTTTCTACATTGGTAT+TGG 0.361873 1_4:+54540405 Msa0170460:CDS
CAAACCTCTAATTACCTTGC+AGG 0.364770 1_4:+54541240 Msa0170460:three_prime_UTR
CAGCTATTAGAGCCTGCATT+TGG 0.370250 1_4:-54538329 None:intergenic
TAACAAATCAATTGCTGCCT+TGG 0.372173 1_4:-54538705 None:intergenic
ACAGTTAATATTGTACCTAT+TGG 0.373426 1_4:-54537289 None:intergenic
GTTTCTGATCTCTTAGTCCT+TGG 0.375417 1_4:-54537747 None:intergenic
AAACCAGCAACCGCTTGGTT+TGG 0.375908 1_4:-54540233 None:intergenic
TCAATACTTTGAAAGGGTTC+AGG 0.379007 1_4:+54537987 Msa0170460:CDS
AGGTATTCAACTACTCCTTC+TGG 0.379870 1_4:-54539827 None:intergenic
GCCATTGATATTCTTGAATC+CGG 0.380624 1_4:-54539242 None:intergenic
GGAATTGATTTCTTTGTTGA+TGG 0.386950 1_4:+54539548 Msa0170460:CDS
ATCCAACACCAAATTAACTA+TGG 0.387861 1_4:-54539270 None:intergenic
GGATCATATTATTTCGTGCT+TGG 0.390606 1_4:+54538664 Msa0170460:CDS
AACTAGCAATTTGGTGATGA+TGG 0.392035 1_4:-54539597 None:intergenic
GAACTGGCTCAATATCAAAT+AGG 0.394193 1_4:-54537396 None:intergenic
GTTCCTGTGGAAAGGCTAAC+AGG 0.396841 1_4:-54538096 None:intergenic
TTAGAGCCTGCATTTGGCTC+AGG 0.401778 1_4:-54538323 None:intergenic
CTTTGTAGTTAGTTCTCGTT+CGG 0.401965 1_4:-54539954 None:intergenic
AACATCAAATCTAGAATAAG+AGG 0.405447 1_4:-54539452 None:intergenic
GAAAAGAGTTGGCCAGCATT+AGG 0.407138 1_4:+54537848 Msa0170460:CDS
AGAAGGCTAGAAGCTTTGAT+TGG 0.408094 1_4:+54539860 Msa0170460:CDS
CGCTGTGACTCGATATTTGT+AGG 0.409793 1_4:-54540079 None:intergenic
TTTCCAAACCAAGCGGTTGC+TGG 0.410881 1_4:+54540230 Msa0170460:CDS
AAAATTCTATTAACAAGGAT+TGG 0.412160 1_4:+54538352 Msa0170460:CDS
TGCCAATTGTATCTCTTCTC+TGG 0.415239 1_4:-54537227 None:intergenic
TCTTTCCTTTGCCGCATAAA+CGG 0.416779 1_4:+54538057 Msa0170460:CDS
CTGCTCCAAGAAAACAAATT+CGG 0.420958 1_4:-54537908 None:intergenic
GACTCTAGAGCAACTCTAGC+AGG 0.426038 1_4:-54537457 None:intergenic
AGCTGTAATTCCTTTAGAAC+TGG 0.426952 1_4:-54537412 None:intergenic
CGACAATGATAATGTACAAA+TGG 0.431176 1_4:+54539898 Msa0170460:CDS
GATACCGTTATCTCGATCCT+TGG 0.434218 1_4:+54538396 Msa0170460:CDS
TTAAGAATCAATACTTTGAA+AGG 0.434740 1_4:+54537980 Msa0170460:CDS
ACTACAAAGTTGATTGAAAT+GGG 0.437763 1_4:+54539968 Msa0170460:CDS
AAGGAAATGGTGGAATACTA+TGG 0.438629 1_4:+54540562 Msa0170460:CDS
TGATATTGAGCCAGTTCTAA+AGG 0.439774 1_4:+54537402 Msa0170460:CDS
GGCATTTGCAAGTTCGAGAC+TGG 0.440948 1_4:+54539680 Msa0170460:CDS
CATGAGCAGTTCTCAAGACT+TGG 0.442224 1_4:-54537321 None:intergenic
ATGGAGACGGACACCTTAGA+AGG 0.442619 1_4:+54540632 Msa0170460:CDS
AGACCTTTCTTTATCAGCCC+TGG 0.443666 1_4:+54539373 Msa0170460:CDS
GATTTAAACTTGATACAACT+TGG 0.449112 1_4:+54539293 Msa0170460:CDS
TTGCAAGTTCGAGACTGGTT+TGG 0.450043 1_4:+54539685 Msa0170460:CDS
CTATCATGAGCTGCACATAA+AGG 0.455630 1_4:-54540274 None:intergenic
TCTTCATCATCTGCAATCTC+TGG 0.456840 1_4:+54540697 Msa0170460:CDS
GTAGAATCACACGACTAGAT+AGG 0.463205 1_4:-54540861 None:intergenic
CAAGTCAAAATCTCCAATAA+AGG 0.465556 1_4:-54540481 None:intergenic
TACTTTCATAGTAAATGATC+AGG 0.470018 1_4:+54541116 Msa0170460:three_prime_UTR
GACCTTTCTTTATCAGCCCT+GGG 0.470312 1_4:+54539374 Msa0170460:CDS
CTAGCCTTCTAGGCTTGAAA+AGG 0.472124 1_4:-54539847 None:intergenic
ATTTCTTTGTTGATGGAGAA+GGG 0.472359 1_4:+54539555 Msa0170460:CDS
AAGGTAATTGTAATATATAC+TGG 0.472848 1_4:+54541187 Msa0170460:three_prime_UTR
TTGGGGTAGTGAGTCACTTA+AGG 0.479262 1_4:+54540501 Msa0170460:CDS
GGTCCTTCACAAGGGTTACA+AGG 0.481227 1_4:-54538808 None:intergenic
CTCTAGAGCTGATGCAGCAA+GGG 0.481825 1_4:+54537945 Msa0170460:CDS
TAGATTTGATGTTCTCTCCT+CGG 0.486570 1_4:+54539462 Msa0170460:CDS
TAAGAATCAATACTTTGAAA+GGG 0.486686 1_4:+54537981 Msa0170460:CDS
TGCAAGGGCAGTTGGCGTGC+CGG 0.487076 1_4:+54537807 Msa0170460:CDS
GGATTGGAACTCATACCAAT+AGG 0.487791 1_4:+54537274 Msa0170460:CDS
CGTTTCCAGGGTCCTTCACA+AGG 0.487815 1_4:-54538817 None:intergenic
TATTGGAAAAGAGAGTTTCA+AGG 0.490061 1_4:+54537360 Msa0170460:CDS
CCTATCTCGGATGGTTCCAC+CGG 0.490488 1_4:-54537826 None:intergenic
ACGAAGGTTGTGACCTGAGT+TGG 0.490630 1_4:-54539633 None:intergenic
GCTATCGAGAATTTCTGATC+AGG 0.493655 1_4:+54537645 Msa0170460:CDS
TTGAGAAAATCAACAAGTAA+AGG 0.494414 1_4:-54540127 None:intergenic
AAGGGATATTGGAAGGTCTC+TGG 0.494510 1_4:+54537594 Msa0170460:CDS
GATGCAAAGGGTTGAGTTCG+AGG 0.494531 1_4:+54537687 Msa0170460:CDS
AGCCATAGTTAATTTGGTGT+TGG 0.494995 1_4:+54539268 Msa0170460:CDS
GTATGTCATTCGCGAAAGCC+TGG 0.495334 1_4:-54537774 None:intergenic
AAGGGAATTATTGCTTCCTC+CGG 0.497226 1_4:+54539422 Msa0170460:CDS
CTAGCTGATCGCATGATTCG+AGG 0.500921 1_4:+54538935 Msa0170460:CDS
CCTTAGAAGGAAAGCTGCTA+AGG 0.501027 1_4:+54540645 Msa0170460:CDS
AACGTTAAAGCTCTCGAAGA+AGG 0.504766 1_4:+54540838 Msa0170460:three_prime_UTR
CTCTGTCATTGGACTTCCCA+AGG 0.507482 1_4:-54538413 None:intergenic
TCAGCCCTGGGTAAACTAGC+TGG 0.507504 1_4:+54539386 Msa0170460:CDS
TTGGAAATAACTGTGAGCTT+TGG 0.507616 1_4:-54540214 None:intergenic
GACTACAAGGTGAGATGCAA+AGG 0.508604 1_4:+54537674 Msa0170460:CDS
GAGGAGATTGCAAGGGCAGT+TGG 0.509609 1_4:+54537799 Msa0170460:CDS
ATAAGTGAGAACACAGAAAG+AGG 0.510077 1_4:-54541061 None:intergenic
TTCCAGAGAAGAGATACAAT+TGG 0.512392 1_4:+54537225 Msa0170460:five_prime_UTR
GATTTCTTTGTTGATGGAGA+AGG 0.512649 1_4:+54539554 Msa0170460:CDS
ATACCGTTATCTCGATCCTT+GGG 0.513686 1_4:+54538397 Msa0170460:CDS
AGCTGGATCTCATGCTAACA+AGG 0.519513 1_4:+54539403 Msa0170460:CDS
TCTACTTGCTAGTTAAATGC+CGG 0.520480 1_4:+54537542 Msa0170460:CDS
TCATAGTAAATGATCAGGAT+AGG 0.520748 1_4:+54541121 Msa0170460:three_prime_UTR
CTTCCCAAGGATCGAGATAA+CGG 0.521135 1_4:-54538400 None:intergenic
CCTTTGATAGAAATGATGTC+TGG 0.521661 1_4:+54539335 Msa0170460:CDS
TGTATTACAATTACCTTGCA+GGG 0.521692 1_4:-54541219 None:intergenic
TAGAGCCTGCATTTGGCTCA+GGG 0.522213 1_4:-54538322 None:intergenic
AATGTACAAATGGCTGCAGC+TGG 0.523529 1_4:+54539908 Msa0170460:CDS
AGGACTAAGAGATCAGAAAC+AGG 0.524044 1_4:+54537750 Msa0170460:CDS
TTTGAAACTTCTGTGAGGTA+AGG 0.525655 1_4:+54536857 Msa0170460:five_prime_UTR
CCGGTGGAACCATCCGAGAT+AGG 0.527413 1_4:+54537826 Msa0170460:CDS
TATCATTGTCGTCGTTCTCG+AGG 0.528609 1_4:-54539886 None:intergenic
AAACTTTCTGCTTCTGACGA+TGG 0.528761 1_4:+54539527 Msa0170460:CDS
CGGCAAAGGAAAGAATTAAG+AGG 0.530404 1_4:-54538048 None:intergenic
AGAGATCAGCTATTGAAGGT+TGG 0.530598 1_4:+54538127 Msa0170460:CDS
TTGGAAGCAAATGCTTTACC+TGG 0.532479 1_4:+54540328 Msa0170460:CDS
ACCGGATTCAAGAATATCAA+TGG 0.533121 1_4:+54539241 Msa0170460:CDS
AAACTTGATACAACTTGGAA+AGG 0.535362 1_4:+54539298 Msa0170460:CDS
AATACAAACACTTTCTACAT+TGG 0.535747 1_4:+54540399 Msa0170460:CDS
GCAATTGCAGCAGCTTTCAT+CGG 0.538108 1_4:+54540172 Msa0170460:CDS
TCACTGCTGCTAATTGTGGC+TGG 0.538398 1_4:+54538903 Msa0170460:CDS
TGTGAGAGATCAGCTATTGA+AGG 0.539191 1_4:+54538123 Msa0170460:CDS
GGAATTATTGCTTCCTCCGG+AGG 0.539312 1_4:+54539425 Msa0170460:CDS
TGATGTTCTCTCCTCGGACA+AGG 0.543610 1_4:+54539468 Msa0170460:CDS
CCAGACATCATTTCTATCAA+AGG 0.545276 1_4:-54539335 None:intergenic
TTGATACAACTTGGAAAGGA+AGG 0.545563 1_4:+54539302 Msa0170460:CDS
AGGAAGTTGAGCAAGTTACA+AGG 0.548285 1_4:+54537575 Msa0170460:CDS
TCTTGAAGCAGATGTTAAAA+GGG 0.550180 1_4:+54537480 Msa0170460:CDS
AGAATCCCTGAGCCAAATGC+AGG 0.550783 1_4:+54538317 Msa0170460:CDS
GATAGAGAGATACGATTCAA+AGG 0.551367 1_4:+54538011 Msa0170460:CDS
GAGTTGCTTCAAGAAAGATC+TGG 0.552357 1_4:+54538731 Msa0170460:CDS
AATTGGCTGAATCACAAGGA+TGG 0.555747 1_4:+54538642 Msa0170460:CDS
GATCCTGTTAGCCTTTCCAC+AGG 0.555922 1_4:+54538093 Msa0170460:CDS
CAGCTCCGTTTATGCGGCAA+AGG 0.557270 1_4:-54538062 None:intergenic
GATAAAGCTGTTACATGGTG+AGG 0.558362 1_4:+54540354 Msa0170460:CDS
TACCCAGGGCTGATAAAGAA+AGG 0.560311 1_4:-54539376 None:intergenic
GTCTCCATAAATATTACTGC+CGG 0.561473 1_4:-54540617 None:intergenic
CACATGTAGTTCCTGTGGAA+AGG 0.563701 1_4:-54538104 None:intergenic
TTCTCTCAGCATGAACCAGA+AGG 0.565766 1_4:+54539812 Msa0170460:CDS
GTAACCCTTGTGAAGGACCC+TGG 0.565954 1_4:+54538812 Msa0170460:CDS
AGCTGAAAATTCTATTAACA+AGG 0.570382 1_4:+54538347 Msa0170460:CDS
ATTGGCTGAATCACAAGGAT+GGG 0.570651 1_4:+54538643 Msa0170460:CDS
ATTGGAAGAGCATCCGCAGA+GGG 0.571893 1_4:+54540423 Msa0170460:CDS
AAAGGAAAGAATTAAGAGGT+TGG 0.572084 1_4:-54538044 None:intergenic
ACTTTGAAAGATGTTGTAGA+GGG 0.572945 1_4:+54538459 Msa0170460:CDS
CCAAGAAGAGCACGTAGCGT+TGG 0.573594 1_4:-54539659 None:intergenic
AAAGCAATTCTTGCAGCCAA+TGG 0.574145 1_4:+54539713 Msa0170460:CDS
GAGTCAGAATCATCAAGAAG+TGG 0.574190 1_4:-54539752 None:intergenic
CAAGGATTGGATCTCTATTG+GGG 0.575873 1_4:+54538365 Msa0170460:CDS
TTGCTCAACTTCCTCGACAA+TGG 0.577351 1_4:-54537566 None:intergenic
TTGTTCTTGGATATTGGCGT+CGG 0.577610 1_4:+54540968 Msa0170460:three_prime_UTR
CCTCTGCTGAATCGTTTCCA+GGG 0.579125 1_4:-54538829 None:intergenic
GCTGAGAGAAAAGAAAGAGC+AGG 0.581887 1_4:-54539799 None:intergenic
TGCTTCAAGAAAGATCTGGT+TGG 0.583477 1_4:+54538735 Msa0170460:CDS
ATTTAACTAGCAAGTAGAAA+CGG 0.583722 1_4:-54537537 None:intergenic
GGCAGTAATATTTATGGAGA+CGG 0.583777 1_4:+54540619 Msa0170460:CDS
AGAGAAGAGATACAATTGGC+AGG 0.584067 1_4:+54537229 Msa0170460:five_prime_UTR
TAGAATAAGAGGAACACCTC+CGG 0.584174 1_4:-54539441 None:intergenic
CACTTTGAAAGATGTTGTAG+AGG 0.586417 1_4:+54538458 Msa0170460:CDS
CCATAACAGCTCCGTTTATG+CGG 0.587162 1_4:-54538068 None:intergenic
AAGGGCAGTTGGCGTGCCGG+TGG 0.588235 1_4:+54537810 Msa0170460:CDS
ATTGTCACTGCTGCTAATTG+TGG 0.588383 1_4:+54538899 Msa0170460:CDS
TTGCAACAGAATTCCAACTC+AGG 0.589919 1_4:+54539620 Msa0170460:CDS
TCGCGTTTGATTTGTTTGAC+CGG 0.589935 1_4:+54540598 Msa0170460:CDS
TAACCTTGTAACCCTTGTGA+AGG 0.590842 1_4:+54538805 Msa0170460:CDS
ATCCGAGATAGGAAAAGAGT+TGG 0.592571 1_4:+54537837 Msa0170460:CDS
CGAATCATGCGATCAGCTAG+TGG 0.593637 1_4:-54538932 None:intergenic
AGAGTTGGCCAGCATTAGGA+AGG 0.594767 1_4:+54537852 Msa0170460:CDS
GAGAAATTGGCTGAATCACA+AGG 0.594803 1_4:+54538638 Msa0170460:CDS
GCAGGTTTATAGCAGTCTCT+CGG 0.596490 1_4:-54539781 None:intergenic
ACTACAAGGTGAGATGCAAA+GGG 0.597147 1_4:+54537675 Msa0170460:CDS
GATCAGGTTGATAGACTACA+AGG 0.597370 1_4:+54537661 Msa0170460:CDS
ACATACTTGAGGAGATTGCA+AGG 0.599820 1_4:+54537791 Msa0170460:CDS
CACGTAGCGTTGGCTTACGA+AGG 0.602202 1_4:-54539649 None:intergenic
TCTCTAGAGCTGATGCAGCA+AGG 0.604293 1_4:+54537944 Msa0170460:CDS
CGTAAACCTAATTACCTGCA+AGG 0.606045 1_4:-54541254 None:intergenic
TACAGGTTCAATCACTGCAA+AGG 0.608049 1_4:+54540150 Msa0170460:CDS
TTCCAATAGACAAAATGTTG+TGG 0.608354 1_4:-54540311 None:intergenic
GAGATCCAGCTAGTTTACCC+AGG 0.610834 1_4:-54539391 None:intergenic
AAGTTACAAGGGATATTGGA+AGG 0.611170 1_4:+54537587 Msa0170460:CDS
CTCACAGAAGTTTCAAACTG+TGG 0.611272 1_4:-54536851 None:intergenic
TCTCTCACATGTAGTTCCTG+TGG 0.611431 1_4:-54538109 None:intergenic
TGGAAACGATTCAGCAGAGG+TGG 0.613714 1_4:+54538832 Msa0170460:CDS
CAACTTCCTCGACAATGGAC+CGG 0.616683 1_4:-54537561 None:intergenic
GGTTTGATAAAGCTGTTACA+TGG 0.619938 1_4:+54540349 Msa0170460:CDS
AAGCAACTCTAACATTTCCA+AGG 0.624995 1_4:+54538688 Msa0170460:CDS
AAGAATTAGAGATACGCCAT+TGG 0.628175 1_4:-54539729 None:intergenic
CAAATATGAAAATCAGACAA+TGG 0.629875 1_4:-54540770 None:intergenic
TAAGACAATCGATCGAAGAG+TGG 0.630519 1_4:+54538226 Msa0170460:CDS
AAGAGATCAGAAACAGGACC+AGG 0.632504 1_4:+54537756 Msa0170460:CDS
TTCTTGAAGATACTAGCTTG+AGG 0.637093 1_4:+54538190 Msa0170460:CDS
AGATCCAGCTAGTTTACCCA+GGG 0.639000 1_4:-54539390 None:intergenic
GGATTGGATCTCTATTGGGG+AGG 0.641735 1_4:+54538368 Msa0170460:CDS
TGTAACAGCTTTATCAAACC+AGG 0.642306 1_4:-54540346 None:intergenic
ATTGTTGACAAGTTGAACCA+AGG 0.644614 1_4:+54537730 Msa0170460:CDS
GGAAGTTGAGCAAGTTACAA+GGG 0.644907 1_4:+54537576 Msa0170460:CDS
AACTGATCCAGAAACACAAG+AGG 0.645279 1_4:+54538167 Msa0170460:CDS
AGAGGGGCATGCAAGAAACA+AGG 0.645650 1_4:+54538476 Msa0170460:CDS
CCCTGGAAACGATTCAGCAG+AGG 0.647958 1_4:+54538829 Msa0170460:CDS
TTTCGCGAATGACATACTTG+AGG 0.650871 1_4:+54537780 Msa0170460:CDS
GTTTCCAGGGTCCTTCACAA+GGG 0.658541 1_4:-54538816 None:intergenic
TAAATGCCGGTCCATTGTCG+AGG 0.660709 1_4:+54537555 Msa0170460:CDS
CAGAAGCAGAAAGTTTCTCG+AGG 0.661727 1_4:-54539520 None:intergenic
ACAGTTATTTCCAAACCAAG+CGG 0.662952 1_4:+54540223 Msa0170460:CDS
CTTTGAAAGATGTTGTAGAG+GGG 0.675379 1_4:+54538460 Msa0170460:CDS
GAAACTCTAGGCCATAAAGT+CGG 0.676751 1_4:+54540731 Msa0170460:exon
AATAAGAGGAACACCTCCGG+AGG 0.680566 1_4:-54539438 None:intergenic
GTAATGAATGACCTTGTCCG+AGG 0.681100 1_4:-54539479 None:intergenic
TATGAGTTCCAATCCTACCA+TGG 0.683552 1_4:-54537266 None:intergenic
GCTGGATCTCATGCTAACAA+GGG 0.684666 1_4:+54539404 Msa0170460:CDS
AATAGGTACAATATTAACTG+TGG 0.686641 1_4:+54537291 Msa0170460:CDS
ACAAAGTTGATTGAAATGGG+AGG 0.690277 1_4:+54539971 Msa0170460:CDS
CAGCGCGATTTGGTTAAACG+CGG 0.693546 1_4:+54540097 Msa0170460:CDS
AACAAACGAGCACCCCTCTG+CGG 0.694775 1_4:-54540436 None:intergenic
CACAGTTTGAAACTTCTGTG+AGG 0.697984 1_4:+54536852 Msa0170460:five_prime_UTR
CATACTTGAGGAGATTGCAA+GGG 0.701171 1_4:+54537792 Msa0170460:CDS
CTAGCAAGTAGAAACGGCCA+CGG 0.705648 1_4:-54537531 None:intergenic
GGTGGAATACTATGGAACGA+CGG 0.715990 1_4:+54540570 Msa0170460:CDS
GTTGAGAAGTACAAGAACCG+TGG 0.724475 1_4:+54537514 Msa0170460:CDS
TATTGGAAGAGCATCCGCAG+AGG 0.727150 1_4:+54540422 Msa0170460:CDS
TTGGAAGAGCATCCGCAGAG+GGG 0.744656 1_4:+54540424 Msa0170460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATTATGTAAAATTATATA+TGG + chr1_4:54537080-54537099 Msa0170460:intron 10.0%
!! TTAATTTACATTTAAGAATT+AGG - chr1_4:54541005-54541024 None:intergenic 10.0%
!! AACTATAATTTATCATGTTA+AGG - chr1_4:54537021-54537040 None:intergenic 15.0%
!!! ATTTTCATATTTGATCTATT+AGG + chr1_4:54540780-54540799 Msa0170460:three_prime_UTR 15.0%
!!! ATGACTTATTCTAGAATTAA+TGG + chr1_4:54537147-54537166 Msa0170460:intron 20.0%
!! TTAAGAATCAATACTTTGAA+AGG + chr1_4:54537980-54537999 Msa0170460:CDS 20.0%
!!! TAAGAATCAATACTTTGAAA+GGG + chr1_4:54537981-54538000 Msa0170460:CDS 20.0%
!!! TCAATTATTGTCTTTTGATA+AGG + chr1_4:54538256-54538275 Msa0170460:CDS 20.0%
!! AAAATTCTATTAACAAGGAT+TGG + chr1_4:54538352-54538371 Msa0170460:CDS 20.0%
!! CATTTGCATAAAAATGTAAT+AGG + chr1_4:54538616-54538635 Msa0170460:intron 20.0%
!! AAAAATGTAATAGGAGAAAT+TGG + chr1_4:54538625-54538644 Msa0170460:intron 20.0%
!!! ATCATAAGCATTTTAAAAAC+AGG + chr1_4:54540004-54540023 Msa0170460:CDS 20.0%
!!! ACAAATTAATCTTTCAAGTT+AGG - chr1_4:54540886-54540905 None:intergenic 20.0%
!!! TCTTTTTCTTTGTATAAACA+AGG - chr1_4:54540928-54540947 None:intergenic 20.0%
!! AAGGTAATTGTAATATATAC+TGG + chr1_4:54541187-54541206 Msa0170460:three_prime_UTR 20.0%
!!! TTATTCTAGAATTAATGGAC+TGG + chr1_4:54537152-54537171 Msa0170460:intron 25.0%
!!! TATTTTTTATGCTCTACAAG+AGG + chr1_4:54537182-54537201 Msa0170460:five_prime_UTR 25.0%
! ACAGTTAATATTGTACCTAT+TGG - chr1_4:54537292-54537311 None:intergenic 25.0%
! AATAGGTACAATATTAACTG+TGG + chr1_4:54537291-54537310 Msa0170460:CDS 25.0%
! ATTTAACTAGCAAGTAGAAA+CGG - chr1_4:54537540-54537559 None:intergenic 25.0%
!! AATTTAACGACAAATTTTCC+CGG - chr1_4:54538287-54538306 None:intergenic 25.0%
! AGCTGAAAATTCTATTAACA+AGG + chr1_4:54538347-54538366 Msa0170460:CDS 25.0%
! GATTTAAACTTGATACAACT+TGG + chr1_4:54539293-54539312 Msa0170460:CDS 25.0%
!! AACATCAAATCTAGAATAAG+AGG - chr1_4:54539455-54539474 None:intergenic 25.0%
!! AACTACAAAGTTGATTGAAA+TGG + chr1_4:54539967-54539986 Msa0170460:CDS 25.0%
!! ACTACAAAGTTGATTGAAAT+GGG + chr1_4:54539968-54539987 Msa0170460:CDS 25.0%
!!! CATTTTAAAAACAGGCAAAA+TGG + chr1_4:54540012-54540031 Msa0170460:CDS 25.0%
! TTGAGAAAATCAACAAGTAA+AGG - chr1_4:54540130-54540149 None:intergenic 25.0%
! AATACAAACACTTTCTACAT+TGG + chr1_4:54540399-54540418 Msa0170460:CDS 25.0%
!!! TTTATTGGAGATTTTGACTT+GGG + chr1_4:54540483-54540502 Msa0170460:CDS 25.0%
! CAAATATGAAAATCAGACAA+TGG - chr1_4:54540773-54540792 None:intergenic 25.0%
! TACTTTCATAGTAAATGATC+AGG + chr1_4:54541116-54541135 Msa0170460:three_prime_UTR 25.0%
! CTACAAGAGGATTGATTTAT+AGG + chr1_4:54537195-54537214 Msa0170460:five_prime_UTR 30.0%
! AGGTGTATAGATTTTTACCA+TGG + chr1_4:54537249-54537268 Msa0170460:exon 30.0%
! GTATAGATTTTTACCATGGT+AGG + chr1_4:54537253-54537272 Msa0170460:exon 30.0%
TATTGGAAAAGAGAGTTTCA+AGG + chr1_4:54537360-54537379 Msa0170460:CDS 30.0%
TCTTGAAGCAGATGTTAAAA+GGG + chr1_4:54537480-54537499 Msa0170460:CDS 30.0%
TGTTAAAAGGGCGAATAATA+TGG + chr1_4:54537492-54537511 Msa0170460:CDS 30.0%
!! AAAAGCCGAATTTGTTTTCT+TGG + chr1_4:54537903-54537922 Msa0170460:CDS 30.0%
AAAGGAAAGAATTAAGAGGT+TGG - chr1_4:54538047-54538066 None:intergenic 30.0%
!!! ATTGAAGGTTGGTTTTATGA+TGG + chr1_4:54538138-54538157 Msa0170460:CDS 30.0%
! ACTTTGAAAGATGTTGTAGA+GGG + chr1_4:54538459-54538478 Msa0170460:CDS 30.0%
TCATGAATACTAAATCTCAG+TGG - chr1_4:54538530-54538549 None:intergenic 30.0%
!! CTTATTTCTATAAGCTCATC+CGG + chr1_4:54539066-54539085 Msa0170460:intron 30.0%
!! AGTTGTTTTCATAAGCTATC+CGG - chr1_4:54539088-54539107 None:intergenic 30.0%
ATATAATCTACTATGACCCT+AGG - chr1_4:54539190-54539209 None:intergenic 30.0%
ATCCAACACCAAATTAACTA+TGG - chr1_4:54539273-54539292 None:intergenic 30.0%
AAACTTGATACAACTTGGAA+AGG + chr1_4:54539298-54539317 Msa0170460:CDS 30.0%
! GGAATTGATTTCTTTGTTGA+TGG + chr1_4:54539548-54539567 Msa0170460:CDS 30.0%
! ATTTCTTTGTTGATGGAGAA+GGG + chr1_4:54539555-54539574 Msa0170460:CDS 30.0%
! CGACAATGATAATGTACAAA+TGG + chr1_4:54539898-54539917 Msa0170460:CDS 30.0%
!!! CTTGTTGATTTTCTCAATAC+AGG + chr1_4:54540133-54540152 Msa0170460:CDS 30.0%
TTCCAATAGACAAAATGTTG+TGG - chr1_4:54540314-54540333 None:intergenic 30.0%
AACACTTTCTACATTGGTAT+TGG + chr1_4:54540405-54540424 Msa0170460:CDS 30.0%
AAATGCAATGAGACCTTTAT+TGG + chr1_4:54540468-54540487 Msa0170460:CDS 30.0%
CAAGTCAAAATCTCCAATAA+AGG - chr1_4:54540484-54540503 None:intergenic 30.0%
!!! CTTTATTGGAGATTTTGACT+TGG + chr1_4:54540482-54540501 Msa0170460:CDS 30.0%
!!! TTATTGGAGATTTTGACTTG+GGG + chr1_4:54540484-54540503 Msa0170460:CDS 30.0%
ACTAAGTTGTTCTTGGATAT+TGG + chr1_4:54540962-54540981 Msa0170460:three_prime_UTR 30.0%
! AGTGTTTTCTATTACTTGCA+AGG + chr1_4:54541093-54541112 Msa0170460:three_prime_UTR 30.0%
TCATAGTAAATGATCAGGAT+AGG + chr1_4:54541121-54541140 Msa0170460:three_prime_UTR 30.0%
TACAAAACCTCAAAAACAGA+AGG + chr1_4:54541168-54541187 Msa0170460:three_prime_UTR 30.0%
!!! ACAATTACCTTCTGTTTTTG+AGG - chr1_4:54541178-54541197 None:intergenic 30.0%
TGTATTACAATTACCTTGCA+GGG - chr1_4:54541222-54541241 None:intergenic 30.0%
TTGTATTACAATTACCTTGC+AGG - chr1_4:54541223-54541242 None:intergenic 30.0%
TAATTACCTTGCAGGTAATT+AGG + chr1_4:54541248-54541267 Msa0170460:three_prime_UTR 30.0%
! TTTGAAACTTCTGTGAGGTA+AGG + chr1_4:54536857-54536876 Msa0170460:five_prime_UTR 35.0%
TGTAACAATCTTGAAGAGAG+TGG - chr1_4:54536891-54536910 None:intergenic 35.0%
TTCCAGAGAAGAGATACAAT+TGG + chr1_4:54537225-54537244 Msa0170460:five_prime_UTR 35.0%
! GATTTTTACCATGGTAGGAT+TGG + chr1_4:54537258-54537277 Msa0170460:exon 35.0%
! GAACTGGCTCAATATCAAAT+AGG - chr1_4:54537399-54537418 None:intergenic 35.0%
! TGATATTGAGCCAGTTCTAA+AGG + chr1_4:54537402-54537421 Msa0170460:CDS 35.0%
!! AGCTGTAATTCCTTTAGAAC+TGG - chr1_4:54537415-54537434 None:intergenic 35.0%
CTCTTGAAGCAGATGTTAAA+AGG + chr1_4:54537479-54537498 Msa0170460:CDS 35.0%
! TCTACTTGCTAGTTAAATGC+CGG + chr1_4:54537542-54537561 Msa0170460:CDS 35.0%
AAGTTACAAGGGATATTGGA+AGG + chr1_4:54537587-54537606 Msa0170460:CDS 35.0%
! ATTGTTGACAAGTTGAACCA+AGG + chr1_4:54537730-54537749 Msa0170460:CDS 35.0%
! TTCTTTTTCCTTCCTAATGC+TGG - chr1_4:54537863-54537882 None:intergenic 35.0%
AAAAAGAAGAAGCTGCGAAT+AGG + chr1_4:54537875-54537894 Msa0170460:CDS 35.0%
CTGCTCCAAGAAAACAAATT+CGG - chr1_4:54537911-54537930 None:intergenic 35.0%
! TCAATACTTTGAAAGGGTTC+AGG + chr1_4:54537987-54538006 Msa0170460:CDS 35.0%
GATAGAGAGATACGATTCAA+AGG + chr1_4:54538011-54538030 Msa0170460:CDS 35.0%
! TTCTTGAAGATACTAGCTTG+AGG + chr1_4:54538190-54538209 Msa0170460:CDS 35.0%
! GTCTTTTGATAAGGTCTATC+CGG + chr1_4:54538265-54538284 Msa0170460:CDS 35.0%
! TCTTTTGATAAGGTCTATCC+GGG + chr1_4:54538266-54538285 Msa0170460:CDS 35.0%
AACAAGGATTGGATCTCTAT+TGG + chr1_4:54538363-54538382 Msa0170460:CDS 35.0%
ACAAGGATTGGATCTCTATT+GGG + chr1_4:54538364-54538383 Msa0170460:CDS 35.0%
! CACTTTGAAAGATGTTGTAG+AGG + chr1_4:54538458-54538477 Msa0170460:CDS 35.0%
! CTTTGAAAGATGTTGTAGAG+GGG + chr1_4:54538460-54538479 Msa0170460:CDS 35.0%
GGATCATATTATTTCGTGCT+TGG + chr1_4:54538664-54538683 Msa0170460:CDS 35.0%
AAGCAACTCTAACATTTCCA+AGG + chr1_4:54538688-54538707 Msa0170460:CDS 35.0%
TAACAAATCAATTGCTGCCT+TGG - chr1_4:54538708-54538727 None:intergenic 35.0%
TCACTTATATGTCAAGTCCT+AGG + chr1_4:54539170-54539189 Msa0170460:intron 35.0%
CACTTATATGTCAAGTCCTA+GGG + chr1_4:54539171-54539190 Msa0170460:intron 35.0%
ACCGGATTCAAGAATATCAA+TGG + chr1_4:54539241-54539260 Msa0170460:CDS 35.0%
GCCATTGATATTCTTGAATC+CGG - chr1_4:54539245-54539264 None:intergenic 35.0%
GGCAAAAGCCATAGTTAATT+TGG + chr1_4:54539262-54539281 Msa0170460:CDS 35.0%
!! AGCCATAGTTAATTTGGTGT+TGG + chr1_4:54539268-54539287 Msa0170460:CDS 35.0%
TTGATACAACTTGGAAAGGA+AGG + chr1_4:54539302-54539321 Msa0170460:CDS 35.0%
CCAGACATCATTTCTATCAA+AGG - chr1_4:54539338-54539357 None:intergenic 35.0%
CCTTTGATAGAAATGATGTC+TGG + chr1_4:54539335-54539354 Msa0170460:CDS 35.0%
TAGATTTGATGTTCTCTCCT+CGG + chr1_4:54539462-54539481 Msa0170460:CDS 35.0%
AGAAAGTTTCTCGAGGATTT+CGG - chr1_4:54539516-54539535 None:intergenic 35.0%
! GATTTCTTTGTTGATGGAGA+AGG + chr1_4:54539554-54539573 Msa0170460:CDS 35.0%
!! AACTAGCAATTTGGTGATGA+TGG - chr1_4:54539600-54539619 None:intergenic 35.0%
CTGTTGCAAAACTAGCAATT+TGG - chr1_4:54539609-54539628 None:intergenic 35.0%
AAGAATTAGAGATACGCCAT+TGG - chr1_4:54539732-54539751 None:intergenic 35.0%
!! AATACCTTTTCAAGCCTAGA+AGG + chr1_4:54539843-54539862 Msa0170460:CDS 35.0%
! CTTTGTAGTTAGTTCTCGTT+CGG - chr1_4:54539957-54539976 None:intergenic 35.0%
! ACAAAGTTGATTGAAATGGG+AGG + chr1_4:54539971-54539990 Msa0170460:CDS 35.0%
TTGGAAATAACTGTGAGCTT+TGG - chr1_4:54540217-54540236 None:intergenic 35.0%
! ACAGTTATTTCCAAACCAAG+CGG + chr1_4:54540223-54540242 Msa0170460:CDS 35.0%
! GACCACAACATTTTGTCTAT+TGG + chr1_4:54540309-54540328 Msa0170460:CDS 35.0%
! TGTAACAGCTTTATCAAACC+AGG - chr1_4:54540349-54540368 None:intergenic 35.0%
GGTTTGATAAAGCTGTTACA+TGG + chr1_4:54540349-54540368 Msa0170460:CDS 35.0%
! GGTTTTTGTGTCAAAGGAAA+TGG + chr1_4:54540549-54540568 Msa0170460:CDS 35.0%
! TTTTGTGTCAAAGGAAATGG+TGG + chr1_4:54540552-54540571 Msa0170460:CDS 35.0%
! AAGGAAATGGTGGAATACTA+TGG + chr1_4:54540562-54540581 Msa0170460:CDS 35.0%
TTGACCGGCAGTAATATTTA+TGG + chr1_4:54540613-54540632 Msa0170460:CDS 35.0%
GTCTCCATAAATATTACTGC+CGG - chr1_4:54540620-54540639 None:intergenic 35.0%
GGCAGTAATATTTATGGAGA+CGG + chr1_4:54540619-54540638 Msa0170460:CDS 35.0%
CATTGCTTGAACGTTATTCT+AGG + chr1_4:54540674-54540693 Msa0170460:CDS 35.0%
AGATGTCACTAAGTTGTTCT+TGG + chr1_4:54540955-54540974 Msa0170460:three_prime_UTR 35.0%
ATAAGTGAGAACACAGAAAG+AGG - chr1_4:54541064-54541083 None:intergenic 35.0%
ATTACCTGCAAGGTAATTAG+AGG - chr1_4:54541247-54541266 None:intergenic 35.0%
CTCACAGAAGTTTCAAACTG+TGG - chr1_4:54536854-54536873 None:intergenic 40.0%
! CACAGTTTGAAACTTCTGTG+AGG + chr1_4:54536852-54536871 Msa0170460:five_prime_UTR 40.0%
TGCCAATTGTATCTCTTCTC+TGG - chr1_4:54537230-54537249 None:intergenic 40.0%
AGAGAAGAGATACAATTGGC+AGG + chr1_4:54537229-54537248 Msa0170460:five_prime_UTR 40.0%
TATGAGTTCCAATCCTACCA+TGG - chr1_4:54537269-54537288 None:intergenic 40.0%
GGATTGGAACTCATACCAAT+AGG + chr1_4:54537274-54537293 Msa0170460:CDS 40.0%
AGGAAGTTGAGCAAGTTACA+AGG + chr1_4:54537575-54537594 Msa0170460:CDS 40.0%
GGAAGTTGAGCAAGTTACAA+GGG + chr1_4:54537576-54537595 Msa0170460:CDS 40.0%
GAGCAAGTTACAAGGGATAT+TGG + chr1_4:54537583-54537602 Msa0170460:CDS 40.0%
GCTATCGAGAATTTCTGATC+AGG + chr1_4:54537645-54537664 Msa0170460:CDS 40.0%
!! GATCAGGTTGATAGACTACA+AGG + chr1_4:54537661-54537680 Msa0170460:CDS 40.0%
ACTACAAGGTGAGATGCAAA+GGG + chr1_4:54537675-54537694 Msa0170460:CDS 40.0%
GTTTCTGATCTCTTAGTCCT+TGG - chr1_4:54537750-54537769 None:intergenic 40.0%
AGGACTAAGAGATCAGAAAC+AGG + chr1_4:54537750-54537769 Msa0170460:CDS 40.0%
TTTCGCGAATGACATACTTG+AGG + chr1_4:54537780-54537799 Msa0170460:CDS 40.0%
ACATACTTGAGGAGATTGCA+AGG + chr1_4:54537791-54537810 Msa0170460:CDS 40.0%
CATACTTGAGGAGATTGCAA+GGG + chr1_4:54537792-54537811 Msa0170460:CDS 40.0%
! AACTCTTTTCCTATCTCGGA+TGG - chr1_4:54537838-54537857 None:intergenic 40.0%
ATCCGAGATAGGAAAAGAGT+TGG + chr1_4:54537837-54537856 Msa0170460:CDS 40.0%
CGGCAAAGGAAAGAATTAAG+AGG - chr1_4:54538051-54538070 None:intergenic 40.0%
TCTTTCCTTTGCCGCATAAA+CGG + chr1_4:54538057-54538076 Msa0170460:CDS 40.0%
TGTGAGAGATCAGCTATTGA+AGG + chr1_4:54538123-54538142 Msa0170460:CDS 40.0%
AGAGATCAGCTATTGAAGGT+TGG + chr1_4:54538127-54538146 Msa0170460:CDS 40.0%
AACTGATCCAGAAACACAAG+AGG + chr1_4:54538167-54538186 Msa0170460:CDS 40.0%
TCAAGAACCTCTTGTGTTTC+TGG - chr1_4:54538177-54538196 None:intergenic 40.0%
TCTTCGATCGATTGTCTTAG+TGG - chr1_4:54538225-54538244 None:intergenic 40.0%
TAAGACAATCGATCGAAGAG+TGG + chr1_4:54538226-54538245 Msa0170460:CDS 40.0%
CAAGGATTGGATCTCTATTG+GGG + chr1_4:54538365-54538384 Msa0170460:CDS 40.0%
ATACCGTTATCTCGATCCTT+GGG + chr1_4:54538397-54538416 Msa0170460:CDS 40.0%
CATCTTCACTTCTCTGTCAT+TGG - chr1_4:54538427-54538446 None:intergenic 40.0%
ATATGTCAAACCTGCAATCG+CGG + chr1_4:54538574-54538593 Msa0170460:intron 40.0%
GAGAAATTGGCTGAATCACA+AGG + chr1_4:54538638-54538657 Msa0170460:CDS 40.0%
AATTGGCTGAATCACAAGGA+TGG + chr1_4:54538642-54538661 Msa0170460:CDS 40.0%
ATTGGCTGAATCACAAGGAT+GGG + chr1_4:54538643-54538662 Msa0170460:CDS 40.0%
GAGTTGCTTCAAGAAAGATC+TGG + chr1_4:54538731-54538750 Msa0170460:CDS 40.0%
TGCTTCAAGAAAGATCTGGT+TGG + chr1_4:54538735-54538754 Msa0170460:CDS 40.0%
TAACCTTGTAACCCTTGTGA+AGG + chr1_4:54538805-54538824 Msa0170460:CDS 40.0%
! GGTGGCGAAGAAAATTTTGA+TGG + chr1_4:54538850-54538869 Msa0170460:CDS 40.0%
ATTGTCACTGCTGCTAATTG+TGG + chr1_4:54538899-54538918 Msa0170460:CDS 40.0%
AAGGGAATTATTGCTTCCTC+CGG + chr1_4:54539422-54539441 Msa0170460:CDS 40.0%
TAGAATAAGAGGAACACCTC+CGG - chr1_4:54539444-54539463 None:intergenic 40.0%
AAACTTTCTGCTTCTGACGA+TGG + chr1_4:54539527-54539546 Msa0170460:CDS 40.0%
TTGCAACAGAATTCCAACTC+AGG + chr1_4:54539620-54539639 Msa0170460:CDS 40.0%
AAAGCAATTCTTGCAGCCAA+TGG + chr1_4:54539713-54539732 Msa0170460:CDS 40.0%
GAGTCAGAATCATCAAGAAG+TGG - chr1_4:54539755-54539774 None:intergenic 40.0%
AGGTATTCAACTACTCCTTC+TGG - chr1_4:54539830-54539849 None:intergenic 40.0%
! ATCAAAGCTTCTAGCCTTCT+AGG - chr1_4:54539860-54539879 None:intergenic 40.0%
! AGAAGGCTAGAAGCTTTGAT+TGG + chr1_4:54539860-54539879 Msa0170460:CDS 40.0%
!! GTTAGTTCTCGTTCGGATTT+TGG - chr1_4:54539950-54539969 None:intergenic 40.0%
TACAGGTTCAATCACTGCAA+AGG + chr1_4:54540150-54540169 Msa0170460:CDS 40.0%
CTATCATGAGCTGCACATAA+AGG - chr1_4:54540277-54540296 None:intergenic 40.0%
TTGGAAGCAAATGCTTTACC+TGG + chr1_4:54540328-54540347 Msa0170460:CDS 40.0%
GATAAAGCTGTTACATGGTG+AGG + chr1_4:54540354-54540373 Msa0170460:CDS 40.0%
TCACTTAAGGCAGAAGCTTT+AGG + chr1_4:54540514-54540533 Msa0170460:CDS 40.0%
!!! AGCTTTAGGACTTTTGGAGA+AGG + chr1_4:54540528-54540547 Msa0170460:CDS 40.0%
! GGAGAAGGTTTTTGTGTCAA+AGG + chr1_4:54540543-54540562 Msa0170460:CDS 40.0%
!! TCGCGTTTGATTTGTTTGAC+CGG + chr1_4:54540598-54540617 Msa0170460:CDS 40.0%
TCTTCATCATCTGCAATCTC+TGG + chr1_4:54540697-54540716 Msa0170460:CDS 40.0%
!!! ATCTGCAATCTCTGGAGTTT+TGG + chr1_4:54540705-54540724 Msa0170460:CDS 40.0%
!!! GAGTTTTGGAGTGAAACTCT+AGG + chr1_4:54540719-54540738 Msa0170460:exon 40.0%
GAAACTCTAGGCCATAAAGT+CGG + chr1_4:54540731-54540750 Msa0170460:exon 40.0%
GCAAATCTGTTCCGACTTTA+TGG - chr1_4:54540745-54540764 None:intergenic 40.0%
AACGTTAAAGCTCTCGAAGA+AGG + chr1_4:54540838-54540857 Msa0170460:three_prime_UTR 40.0%
GTAGAATCACACGACTAGAT+AGG - chr1_4:54540864-54540883 None:intergenic 40.0%
TTGTTCTTGGATATTGGCGT+CGG + chr1_4:54540968-54540987 Msa0170460:three_prime_UTR 40.0%
CAAACCTCTAATTACCTTGC+AGG + chr1_4:54541240-54541259 Msa0170460:three_prime_UTR 40.0%
CGTAAACCTAATTACCTGCA+AGG - chr1_4:54541257-54541276 None:intergenic 40.0%
CATGAGCAGTTCTCAAGACT+TGG - chr1_4:54537324-54537343 None:intergenic 45.0%
GCAGCAGCTGATGTTCTTAT+TGG + chr1_4:54537343-54537362 Msa0170460:CDS 45.0%
! GTTGAGAAGTACAAGAACCG+TGG + chr1_4:54537514-54537533 Msa0170460:CDS 45.0%
TTGCTCAACTTCCTCGACAA+TGG - chr1_4:54537569-54537588 None:intergenic 45.0%
AAGGGATATTGGAAGGTCTC+TGG + chr1_4:54537594-54537613 Msa0170460:CDS 45.0%
GACTACAAGGTGAGATGCAA+AGG + chr1_4:54537674-54537693 Msa0170460:CDS 45.0%
AAGAGATCAGAAACAGGACC+AGG + chr1_4:54537756-54537775 Msa0170460:CDS 45.0%
! GGCCAACTCTTTTCCTATCT+CGG - chr1_4:54537842-54537861 None:intergenic 45.0%
GAAAAGAGTTGGCCAGCATT+AGG + chr1_4:54537848-54537867 Msa0170460:CDS 45.0%
CCATAACAGCTCCGTTTATG+CGG - chr1_4:54538071-54538090 None:intergenic 45.0%
CACATGTAGTTCCTGTGGAA+AGG - chr1_4:54538107-54538126 None:intergenic 45.0%
TCTCTCACATGTAGTTCCTG+TGG - chr1_4:54538112-54538131 None:intergenic 45.0%
CAGCTATTAGAGCCTGCATT+TGG - chr1_4:54538332-54538351 None:intergenic 45.0%
GATACCGTTATCTCGATCCT+TGG + chr1_4:54538396-54538415 Msa0170460:CDS 45.0%
CTTCCCAAGGATCGAGATAA+CGG - chr1_4:54538403-54538422 None:intergenic 45.0%
TATGTCAAACCTGCAATCGC+GGG + chr1_4:54538575-54538594 Msa0170460:intron 45.0%
TCGCATGATTCGAGGTAAGA+AGG + chr1_4:54538943-54538962 Msa0170460:intron 45.0%
ATCCTGCTTCTTCTCTTCTC+AGG + chr1_4:54539218-54539237 Msa0170460:intron 45.0%
AGACCTTTCTTTATCAGCCC+TGG + chr1_4:54539373-54539392 Msa0170460:CDS 45.0%
GACCTTTCTTTATCAGCCCT+GGG + chr1_4:54539374-54539393 Msa0170460:CDS 45.0%
TACCCAGGGCTGATAAAGAA+AGG - chr1_4:54539379-54539398 None:intergenic 45.0%
! AGATCCAGCTAGTTTACCCA+GGG - chr1_4:54539393-54539412 None:intergenic 45.0%
AGCTGGATCTCATGCTAACA+AGG + chr1_4:54539403-54539422 Msa0170460:CDS 45.0%
GCTGGATCTCATGCTAACAA+GGG + chr1_4:54539404-54539423 Msa0170460:CDS 45.0%
GTAATGAATGACCTTGTCCG+AGG - chr1_4:54539482-54539501 None:intergenic 45.0%
CAGAAGCAGAAAGTTTCTCG+AGG - chr1_4:54539523-54539542 None:intergenic 45.0%
! TTGCAAGTTCGAGACTGGTT+TGG + chr1_4:54539685-54539704 Msa0170460:CDS 45.0%
GCAGGTTTATAGCAGTCTCT+CGG - chr1_4:54539784-54539803 None:intergenic 45.0%
GCTGAGAGAAAAGAAAGAGC+AGG - chr1_4:54539802-54539821 None:intergenic 45.0%
TTCTCTCAGCATGAACCAGA+AGG + chr1_4:54539812-54539831 Msa0170460:CDS 45.0%
! CTAGCCTTCTAGGCTTGAAA+AGG - chr1_4:54539850-54539869 None:intergenic 45.0%
TATCATTGTCGTCGTTCTCG+AGG - chr1_4:54539889-54539908 None:intergenic 45.0%
AATGTACAAATGGCTGCAGC+TGG + chr1_4:54539908-54539927 Msa0170460:CDS 45.0%
!! GTTCTCGTTCGGATTTTGGT+AGG - chr1_4:54539946-54539965 None:intergenic 45.0%
CGCTGTGACTCGATATTTGT+AGG - chr1_4:54540082-54540101 None:intergenic 45.0%
GCAATTGCAGCAGCTTTCAT+CGG + chr1_4:54540172-54540191 Msa0170460:CDS 45.0%
TTGAAAAACCAGCAACCGCT+TGG - chr1_4:54540241-54540260 None:intergenic 45.0%
TTGGGGTAGTGAGTCACTTA+AGG + chr1_4:54540501-54540520 Msa0170460:CDS 45.0%
!!! GGCAGAAGCTTTAGGACTTT+TGG + chr1_4:54540522-54540541 Msa0170460:CDS 45.0%
GGTGGAATACTATGGAACGA+CGG + chr1_4:54540570-54540589 Msa0170460:CDS 45.0%
CCTTAGCAGCTTTCCTTCTA+AGG - chr1_4:54540648-54540667 None:intergenic 45.0%
CCTTAGAAGGAAAGCTGCTA+AGG + chr1_4:54540645-54540664 Msa0170460:CDS 45.0%
!! CTGGCTTATTTTTCCCTGCA+AGG + chr1_4:54541206-54541225 Msa0170460:three_prime_UTR 45.0%
!! GACTCTAGAGCAACTCTAGC+AGG - chr1_4:54537460-54537479 None:intergenic 50.0%
CTAGCAAGTAGAAACGGCCA+CGG - chr1_4:54537534-54537553 None:intergenic 50.0%
TAAATGCCGGTCCATTGTCG+AGG + chr1_4:54537555-54537574 Msa0170460:CDS 50.0%
CAACTTCCTCGACAATGGAC+CGG - chr1_4:54537564-54537583 None:intergenic 50.0%
GATGCAAAGGGTTGAGTTCG+AGG + chr1_4:54537687-54537706 Msa0170460:CDS 50.0%
GTATGTCATTCGCGAAAGCC+TGG - chr1_4:54537777-54537796 None:intergenic 50.0%
AGAGTTGGCCAGCATTAGGA+AGG + chr1_4:54537852-54537871 Msa0170460:CDS 50.0%
!! TCTCTAGAGCTGATGCAGCA+AGG + chr1_4:54537944-54537963 Msa0170460:CDS 50.0%
!! CTCTAGAGCTGATGCAGCAA+GGG + chr1_4:54537945-54537964 Msa0170460:CDS 50.0%
CCGCATAAACGGAGCTGTTA+TGG + chr1_4:54538068-54538087 Msa0170460:CDS 50.0%
!! GATCCTGTTAGCCTTTCCAC+AGG + chr1_4:54538093-54538112 Msa0170460:CDS 50.0%
GTTCCTGTGGAAAGGCTAAC+AGG - chr1_4:54538099-54538118 None:intergenic 50.0%
AGAATCCCTGAGCCAAATGC+AGG + chr1_4:54538317-54538336 Msa0170460:CDS 50.0%
! TAGAGCCTGCATTTGGCTCA+GGG - chr1_4:54538325-54538344 None:intergenic 50.0%
! TTAGAGCCTGCATTTGGCTC+AGG - chr1_4:54538326-54538345 None:intergenic 50.0%
GGATTGGATCTCTATTGGGG+AGG + chr1_4:54538368-54538387 Msa0170460:CDS 50.0%
CTCTGTCATTGGACTTCCCA+AGG - chr1_4:54538416-54538435 None:intergenic 50.0%
! AGAGGGGCATGCAAGAAACA+AGG + chr1_4:54538476-54538495 Msa0170460:CDS 50.0%
ATGTCAAACCTGCAATCGCG+GGG + chr1_4:54538576-54538595 Msa0170460:intron 50.0%
AAATTAGTCCCCGCGATTGC+AGG - chr1_4:54538587-54538606 None:intergenic 50.0%
GGTCCTTCACAAGGGTTACA+AGG - chr1_4:54538811-54538830 None:intergenic 50.0%
GTTTCCAGGGTCCTTCACAA+GGG - chr1_4:54538819-54538838 None:intergenic 50.0%
CCTCTGCTGAATCGTTTCCA+GGG - chr1_4:54538832-54538851 None:intergenic 50.0%
ACCTCTGCTGAATCGTTTCC+AGG - chr1_4:54538833-54538852 None:intergenic 50.0%
TGGAAACGATTCAGCAGAGG+TGG + chr1_4:54538832-54538851 Msa0170460:CDS 50.0%
TCACTGCTGCTAATTGTGGC+TGG + chr1_4:54538903-54538922 Msa0170460:CDS 50.0%
CGAATCATGCGATCAGCTAG+TGG - chr1_4:54538935-54538954 None:intergenic 50.0%
CTAGCTGATCGCATGATTCG+AGG + chr1_4:54538935-54538954 Msa0170460:CDS 50.0%
GTCCTGAGAAGAGAAGAAGC+AGG - chr1_4:54539223-54539242 None:intergenic 50.0%
GCTTCTTCTCTTCTCAGGAC+CGG + chr1_4:54539223-54539242 Msa0170460:intron 50.0%
! GAGATCCAGCTAGTTTACCC+AGG - chr1_4:54539394-54539413 None:intergenic 50.0%
GGAATTATTGCTTCCTCCGG+AGG + chr1_4:54539425-54539444 Msa0170460:CDS 50.0%
AATAAGAGGAACACCTCCGG+AGG - chr1_4:54539441-54539460 None:intergenic 50.0%
TGATGTTCTCTCCTCGGACA+AGG + chr1_4:54539468-54539487 Msa0170460:CDS 50.0%
ACGAAGGTTGTGACCTGAGT+TGG - chr1_4:54539636-54539655 None:intergenic 50.0%
GGCATTTGCAAGTTCGAGAC+TGG + chr1_4:54539680-54539699 Msa0170460:CDS 50.0%
TATCGAGTCACAGCGCGATT+TGG + chr1_4:54540087-54540106 Msa0170460:CDS 50.0%
!! CAGCGCGATTTGGTTAAACG+CGG + chr1_4:54540097-54540116 Msa0170460:CDS 50.0%
TTTCCAAACCAAGCGGTTGC+TGG + chr1_4:54540230-54540249 Msa0170460:CDS 50.0%
AAACCAGCAACCGCTTGGTT+TGG - chr1_4:54540236-54540255 None:intergenic 50.0%
!! TATTGGAAGAGCATCCGCAG+AGG + chr1_4:54540422-54540441 Msa0170460:CDS 50.0%
!! ATTGGAAGAGCATCCGCAGA+GGG + chr1_4:54540423-54540442 Msa0170460:CDS 50.0%
ATGGAGACGGACACCTTAGA+AGG + chr1_4:54540632-54540651 Msa0170460:CDS 50.0%
GAGGAGATTGCAAGGGCAGT+TGG + chr1_4:54537799-54537818 Msa0170460:CDS 55.0%
CCTATCTCGGATGGTTCCAC+CGG - chr1_4:54537829-54537848 None:intergenic 55.0%
CAGCTCCGTTTATGCGGCAA+AGG - chr1_4:54538065-54538084 None:intergenic 55.0%
GTAACCCTTGTGAAGGACCC+TGG + chr1_4:54538812-54538831 Msa0170460:CDS 55.0%
CGTTTCCAGGGTCCTTCACA+AGG - chr1_4:54538820-54538839 None:intergenic 55.0%
CCCTGGAAACGATTCAGCAG+AGG + chr1_4:54538829-54538848 Msa0170460:CDS 55.0%
TCAGCCCTGGGTAAACTAGC+TGG + chr1_4:54539386-54539405 Msa0170460:CDS 55.0%
!! CACGTAGCGTTGGCTTACGA+AGG - chr1_4:54539652-54539671 None:intergenic 55.0%
! CCAAGAAGAGCACGTAGCGT+TGG - chr1_4:54539662-54539681 None:intergenic 55.0%
CCAACGCTACGTGCTCTTCT+TGG + chr1_4:54539659-54539678 Msa0170460:CDS 55.0%
ACGCTCTCAGTGCACTCTTC+AGG + chr1_4:54540047-54540066 Msa0170460:CDS 55.0%
!! TTGGAAGAGCATCCGCAGAG+GGG + chr1_4:54540424-54540443 Msa0170460:CDS 55.0%
AACAAACGAGCACCCCTCTG+CGG - chr1_4:54540439-54540458 None:intergenic 55.0%
CCGGTGGAACCATCCGAGAT+AGG + chr1_4:54537826-54537845 Msa0170460:CDS 60.0%
TGCAAGGGCAGTTGGCGTGC+CGG + chr1_4:54537807-54537826 Msa0170460:CDS 65.0%
AAGGGCAGTTGGCGTGCCGG+TGG + chr1_4:54537810-54537829 Msa0170460:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 54536815 54541276 54536815 ID=Msa0170460;Name=Msa0170460
chr1_4 mRNA 54536815 54541276 54536815 ID=Msa0170460-mRNA-1;Parent=Msa0170460;Name=Msa0170460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=152|1|1|1|0.66|0.5|4|544|1013
chr1_4 exon 54536815 54536878 54536815 ID=Msa0170460-mRNA-1:exon:16309;Parent=Msa0170460-mRNA-1
chr1_4 exon 54537180 54538497 54537180 ID=Msa0170460-mRNA-1:exon:16310;Parent=Msa0170460-mRNA-1
chr1_4 exon 54538638 54538956 54538638 ID=Msa0170460-mRNA-1:exon:16311;Parent=Msa0170460-mRNA-1
chr1_4 exon 54539240 54541276 54539240 ID=Msa0170460-mRNA-1:exon:16312;Parent=Msa0170460-mRNA-1
chr1_4 five_prime_UTR 54536815 54536878 54536815 ID=Msa0170460-mRNA-1:five_prime_utr;Parent=Msa0170460-mRNA-1
chr1_4 five_prime_UTR 54537180 54537267 54537180 ID=Msa0170460-mRNA-1:five_prime_utr;Parent=Msa0170460-mRNA-1
chr1_4 CDS 54537268 54538497 54537268 ID=Msa0170460-mRNA-1:cds;Parent=Msa0170460-mRNA-1
chr1_4 CDS 54538638 54538956 54538638 ID=Msa0170460-mRNA-1:cds;Parent=Msa0170460-mRNA-1
chr1_4 CDS 54539240 54540732 54539240 ID=Msa0170460-mRNA-1:cds;Parent=Msa0170460-mRNA-1
chr1_4 three_prime_UTR 54540733 54541276 54540733 ID=Msa0170460-mRNA-1:three_prime_utr;Parent=Msa0170460-mRNA-1
Gene Sequence

>Msa0170460

ATGGTAGGATTGGAACTCATACCAATAGGTACAATATTAACTGTGGTAACAAGCCAAGTCTTGAGAACTGCTCATGCAGCAGCTGATGTTCTTATTGGAAAAGAGAGTTTCAAGGCACTTTCGAAATACCTATTTGATATTGAGCCAGTTCTAAAGGAATTACAGCTTCAAGAATTGAATGATTCTCAACCTGCTAGAGTTGCTCTAGAGTCTCTTGAAGCAGATGTTAAAAGGGCGAATAATATGGTTGAGAAGTACAAGAACCGTGGCCGTTTCTACTTGCTAGTTAAATGCCGGTCCATTGTCGAGGAAGTTGAGCAAGTTACAAGGGATATTGGAAGGTCTCTGGCTGCACTGTCTATTGCAAATACTGAAGTGCTATCGAGAATTTCTGATCAGGTTGATAGACTACAAGGTGAGATGCAAAGGGTTGAGTTCGAGGCTTCACAGTCTCAGCTTGAAATTGTTGACAAGTTGAACCAAGGACTAAGAGATCAGAAACAGGACCAGGCTTTCGCGAATGACATACTTGAGGAGATTGCAAGGGCAGTTGGCGTGCCGGTGGAACCATCCGAGATAGGAAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTGCGAATAGGAAAGAAAAAGCCGAATTTGTTTTCTTGGAGCAGATCATTAAGTTACTCTCTAGAGCTGATGCAGCAAGGGATTATGAAGAAGTTAAGAATCAATACTTTGAAAGGGTTCAGGTGATAGAGAGATACGATTCAAAGGAAAAATATATCCAACCTCTTAATTCTTTCCTTTGCCGCATAAACGGAGCTGTTATGGTTGATCCTGTTAGCCTTTCCACAGGAACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGAAACAGAACTGATCCAGAAACACAAGAGGTTCTTGAAGATACTAGCTTGAGGTCAAACATTCCACTAAGACAATCGATCGAAGAGTGGAGAGAACTCAATTATTGTCTTTTGATAAGGTCTATCCGGGAAAATTTGTCGTTAAATTCTGATCTGAAAGAATCCCTGAGCCAAATGCAGGCTCTAATAGCTGAAAATTCTATTAACAAGGATTGGATCTCTATTGGGGAGGTTACTGATACCGTTATCTCGATCCTTGGGAAGTCCAATGACAGAGAAGTGAAGATGAAGATTTTGATCACTTTGAAAGATGTTGTAGAGGGGCATGCAAGAAACAAGGAGAAATTGGCTGAATCACAAGGATGGGATCATATTATTTCGTGCTTGGAAAGCAACTCTAACATTTCCAAGGCAGCAATTGATTTGTTATATGAGTTGCTTCAAGAAAGATCTGGTTGGAATCAATGTTTTTGCAAAAAACTTTCTGAGAACGACACTGCAGTTCTTAACCTTGTAACCCTTGTGAAGGACCCTGGAAACGATTCAGCAGAGGTGGCGAAGAAAATTTTGATGGAGCTTTTTGAAATAAATGAAAGCAGCATTGTCACTGCTGCTAATTGTGGCTGGTATAAGCCACTAGCTGATCGCATGATTCGAGGACCGGATTCAAGAATATCAATGGCAAAAGCCATAGTTAATTTGGTGTTGGATGATTTAAACTTGATACAACTTGGAAAGGAAGGAGTTATAACTCCTTTGATAGAAATGATGTCTGGCAGTATCGAGTCGAAAGACCTTTCTTTATCAGCCCTGGGTAAACTAGCTGGATCTCATGCTAACAAGGGAATTATTGCTTCCTCCGGAGGTGTTCCTCTTATTCTAGATTTGATGTTCTCTCCTCGGACAAGGTCATTCATTACAATTAAATGCTCCGAAATCCTCGAGAAACTTTCTGCTTCTGACGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATCATCACCAAATTGCTAGTTTTGCAACAGAATTCCAACTCAGGTCACAACCTTCGTAAGCCAACGCTACGTGCTCTTCTTGGCATTTGCAAGTTCGAGACTGGTTTGGTGAAGAAAGCAATTCTTGCAGCCAATGGCGTATCTCTAATTCTTCCACTTCTTGATGATTCTGACTCAGAAGTCCGAGAGACTGCTATAAACCTGCTCTTTCTTTTCTCTCAGCATGAACCAGAAGGAGTAGTTGAATACCTTTTCAAGCCTAGAAGGCTAGAAGCTTTGATTGGATTCCTCGAGAACGACGACAATGATAATGTACAAATGGCTGCAGCTGGCTTACTAGCTAACCTACCAAAATCCGAACGAGAACTAACTACAAAGTTGATTGAAATGGGAGGACTTGATGCAATCATAAGCATTTTAAAAACAGGCAAAATGGAAGCAAAAGAAAACGCTCTCAGTGCACTCTTCAGGTTCACAGATCCTACAAATATCGAGTCACAGCGCGATTTGGTTAAACGCGGAATATATCCTTTACTTGTTGATTTTCTCAATACAGGTTCAATCACTGCAAAGGCAATTGCAGCAGCTTTCATCGGCGATCTTTCTATGAGCACACCAAAGCTCACAGTTATTTCCAAACCAAGCGGTTGCTGGTTTTTCAAATCATCGCGCGTTCCTTTATGTGCAGCTCATGATAGCGTATGCAGTGTGACCACAACATTTTGTCTATTGGAAGCAAATGCTTTACCTGGTTTGATAAAGCTGTTACATGGTGAGGTTCATGCAACTGCTTATGAAGCAATACAAACACTTTCTACATTGGTATTGGAAGAGCATCCGCAGAGGGGTGCTCGTTTGTTGCATGAGAAAAATGCAATGAGACCTTTATTGGAGATTTTGACTTGGGGTAGTGAGTCACTTAAGGCAGAAGCTTTAGGACTTTTGGAGAAGGTTTTTGTGTCAAAGGAAATGGTGGAATACTATGGAACGACGGCTAGATCGCGTTTGATTTGTTTGACCGGCAGTAATATTTATGGAGACGGACACCTTAGAAGGAAAGCTGCTAAGGTATTGTCATTGCTTGAACGTTATTCTAGGTCTTCATCATCTGCAATCTCTGGAGTTTTGGAGTGA
Protein sequence

>Msa0170460

MVGLELIPIGTILTVVTSQVLRTAHAAADVLIGKESFKALSKYLFDIEPVLKELQLQELNDSQPARVALESLEADVKRANNMVEKYKNRGRFYLLVKCRSIVEEVEQVTRDIGRSLAALSIANTEVLSRISDQVDRLQGEMQRVEFEASQSQLEIVDKLNQGLRDQKQDQAFANDILEEIARAVGVPVEPSEIGKELASIRKEKEEAANRKEKAEFVFLEQIIKLLSRADAARDYEEVKNQYFERVQVIERYDSKEKYIQPLNSFLCRINGAVMVDPVSLSTGTTCERSAIEGWFYDGNRTDPETQEVLEDTSLRSNIPLRQSIEEWRELNYCLLIRSIRENLSLNSDLKESLSQMQALIAENSINKDWISIGEVTDTVISILGKSNDREVKMKILITLKDVVEGHARNKEKLAESQGWDHIISCLESNSNISKAAIDLLYELLQERSGWNQCFCKKLSENDTAVLNLVTLVKDPGNDSAEVAKKILMELFEINESSIVTAANCGWYKPLADRMIRGPDSRISMAKAIVNLVLDDLNLIQLGKEGVITPLIEMMSGSIESKDLSLSALGKLAGSHANKGIIASSGGVPLILDLMFSPRTRSFITIKCSEILEKLSASDDGIDFFVDGEGKQLELDSIITKLLVLQQNSNSGHNLRKPTLRALLGICKFETGLVKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGFLENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSITAKAIAAAFIGDLSMSTPKLTVISKPSGCWFFKSSRVPLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEAIQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGSESLKAEALGLLEKVFVSKEMVEYYGTTARSRLICLTGSNIYGDGHLRRKAAKVLSLLERYSRSSSSAISGVLE*