AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0125840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125840 MtrunA17_Chr1g0188041 97.730 1013 23 0 1 1013 1 1013 0.0 2016
Msa0125840 MtrunA17_Chr7g0275961 28.755 1012 669 19 18 1005 16 999 2.98e-112 371
Msa0125840 MtrunA17_Chr8g0346441 28.208 1021 683 20 8 1005 11 1004 1.93e-108 360
Msa0125840 MtrunA17_Chr1g0166171 68.027 147 46 1 587 733 6 151 2.13e-56 192
Msa0125840 MtrunA17_Chr3g0144071 26.792 795 511 33 258 999 26 802 2.08e-46 179
Msa0125840 MtrunA17_Chr3g0084371 28.031 635 402 18 392 1005 231 831 1.62e-44 174
Msa0125840 MtrunA17_Chr1g0166121 71.014 69 20 0 96 164 1 69 5.31e-24 97.4
Msa0125840 MtrunA17_Chr1g0199321 21.997 591 384 15 32 600 31 566 1.59e-17 87.8
Msa0125840 MtrunA17_Chr4g0031431 23.583 547 357 18 91 618 84 588 1.60e-13 74.7
Msa0125840 MtrunA17_Chr7g0275081 38.202 89 55 0 239 327 56 144 1.15e-12 71.6
Msa0125840 MtrunA17_Chr4g0044411 25.360 347 219 10 265 600 277 594 9.73e-12 68.9
Msa0125840 MtrunA17_Chr5g0413681 23.729 295 206 6 47 331 65 350 6.95e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125840 AT1G76390.1 27.595 761 470 29 264 965 28 766 1.03e-37 153
Msa0125840 AT1G76390.2 27.595 761 470 29 264 965 28 766 1.03e-37 153
Msa0125840 AT1G20780.1 26.826 753 488 29 264 968 26 763 1.29e-36 149
Msa0125840 AT1G20780.2 26.826 753 488 29 264 968 26 763 1.29e-36 149
Msa0125840 AT1G20780.3 26.826 753 488 29 264 968 26 763 1.29e-36 149
Msa0125840 AT1G68940.1 23.258 1062 697 33 35 999 37 1077 1.04e-34 144
Msa0125840 AT1G68940.2 23.202 1043 685 32 35 982 37 1058 7.17e-34 141
Msa0125840 AT1G68940.3 25.131 764 508 26 261 973 246 996 1.70e-31 134
Msa0125840 AT3G46510.1 22.978 544 343 22 85 600 80 575 5.05e-12 70.5
Msa0125840 AT1G71020.2 25.067 371 228 12 265 616 99 438 5.99e-12 69.7
Msa0125840 AT1G71020.1 25.067 371 228 12 265 616 247 586 8.48e-12 69.7
Msa0125840 AT3G54790.3 24.643 280 179 10 70 347 67 316 1.04e-11 69.7
Msa0125840 AT3G54790.1 24.643 280 179 10 70 347 67 316 1.04e-11 69.7
Msa0125840 AT3G54790.2 24.643 280 179 10 70 347 31 280 1.85e-11 68.9
Msa0125840 AT3G52450.1 30.496 141 81 2 265 388 11 151 1.89e-11 68.2
Msa0125840 AT2G23140.1 29.213 178 110 3 154 331 142 303 3.31e-11 68.2
Msa0125840 AT2G23140.2 29.213 178 110 3 154 331 139 300 3.36e-11 68.2
Msa0125840 AT2G23140.4 29.213 178 110 3 154 331 139 300 3.36e-11 68.2

Find 238 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGAACCTCTTGTGTTTC+TGG 0.059826 1_3:-54603065 None:intergenic
GCAAATCTGTTCCGACTTTA+TGG 0.111568 1_3:-54605633 None:intergenic
GCAGCAGCTGATGTTCTTAT+TGG 0.181583 1_3:+54602234 Msa0125840:CDS
CTACAAGAGGATTGATTTAT+AGG 0.186849 1_3:+54602086 Msa0125840:five_prime_UTR
GGCAAAAGCCATAGTTAATT+TGG 0.187215 1_3:+54604153 Msa0125840:CDS
TTAATTTACATTTAAGAATT+AGG 0.197480 1_3:-54605893 None:intergenic
GGCAGAAGCTTTAGGACTTT+TGG 0.205522 1_3:+54605413 Msa0125840:CDS
CCTTAGCAGCTTTCCTTCTA+AGG 0.210627 1_3:-54605536 None:intergenic
AAATGCAATGAGACCTTTAT+TGG 0.217381 1_3:+54605359 Msa0125840:CDS
TCTTTCCTTTGCCGCATAAA+TGG 0.221733 1_3:+54602948 Msa0125840:CDS
TTGACCGGCAGTAATATTTA+TGG 0.222346 1_3:+54605504 Msa0125840:CDS
CATCTTCACTTCTCTGTCAT+TGG 0.229854 1_3:-54603315 None:intergenic
TAATTACCTTGCAGGTAATT+AGG 0.233404 1_3:+54606139 Msa0125840:three_prime_UTR
CTGTTGCAAAACTAGCAATT+TGG 0.235539 1_3:-54604497 None:intergenic
GTTAGTTCTCGTTCGGATTT+TGG 0.239898 1_3:-54604838 None:intergenic
ATCAAAGCTTCTAGCCTTCT+AGG 0.241589 1_3:-54604748 None:intergenic
ACCTCTGCTGAATCGTTTCC+AGG 0.248782 1_3:-54603721 None:intergenic
ATCTGCAATCTCTGGAGTTT+TGG 0.262837 1_3:+54605596 Msa0125840:CDS
CTCTTGAAGCAGATGTTAAA+AGG 0.268785 1_3:+54602370 Msa0125840:CDS
CATTGCTTGAACGTTATTCT+AGG 0.272811 1_3:+54605565 Msa0125840:CDS
AGATGTCACTAAGTTGTTCT+TGG 0.287307 1_3:+54605846 Msa0125840:three_prime_UTR
AACAAGGATTGGATCTCTAT+TGG 0.289337 1_3:+54603254 Msa0125840:CDS
TCACTTAAGGCAGAAGCTTT+AGG 0.292250 1_3:+54605405 Msa0125840:CDS
ACAAATTAATCTTTCAAGTT+AGG 0.305712 1_3:-54605774 None:intergenic
CCAACGCTACGTGCTCTTCT+TGG 0.306871 1_3:+54604550 Msa0125840:CDS
TCTTCGATCGATTGTCTTAG+TGG 0.313992 1_3:-54603113 None:intergenic
ACTAAGTTGTTCTTGGATAT+TGG 0.321575 1_3:+54605853 Msa0125840:three_prime_UTR
ACAAGGATTGGATCTCTATT+GGG 0.328260 1_3:+54603255 Msa0125840:CDS
ATTACCTGCAAGGTAATTAG+AGG 0.336307 1_3:-54606135 None:intergenic
AGAAAGTTTCTCGAGGATTT+CGG 0.337226 1_3:-54604404 None:intergenic
GAGCAAGTTACAAGGGATAT+TGG 0.344883 1_3:+54602474 Msa0125840:CDS
TATCGAGTCACAGCGCGATT+TGG 0.345338 1_3:+54604978 Msa0125840:CDS
AACTACAAAGTTGATTGAAA+TGG 0.346902 1_3:+54604858 Msa0125840:CDS
ACGCTCTCAGTGCACTCTTC+AGG 0.348203 1_3:+54604938 Msa0125840:CDS
TTGTATTACAATTACCTTGC+AGG 0.352064 1_3:-54606111 None:intergenic
TGTTAAAAGGGCGAATAATA+TGG 0.357230 1_3:+54602383 Msa0125840:CDS
AACACTTTCTACATTGGTAT+TGG 0.361873 1_3:+54605296 Msa0125840:CDS
CAAACCTCTAATTACCTTGC+AGG 0.364770 1_3:+54606131 Msa0125840:three_prime_UTR
CCGCATAAATGGAGCTGTTA+TGG 0.369355 1_3:+54602959 Msa0125840:CDS
CAGCTATTAGAGCCTGCATT+TGG 0.370250 1_3:-54603220 None:intergenic
TAACAAATCAATTGCTGCCT+TGG 0.372173 1_3:-54603596 None:intergenic
ACCGTTAATATTGTACCTAT+TGG 0.372480 1_3:-54602180 None:intergenic
GTTTCTGATCTCTTAGTCCT+TGG 0.375417 1_3:-54602638 None:intergenic
AAACCAGCAACCGCTTGGTT+TGG 0.375908 1_3:-54605124 None:intergenic
TCAATACTTTGAAAGGGTTC+AGG 0.379007 1_3:+54602878 Msa0125840:CDS
AGGTATTCAACTACTCCTTC+TGG 0.379870 1_3:-54604718 None:intergenic
GCCATTGATATTCTTGAATC+CGG 0.380624 1_3:-54604133 None:intergenic
GGAATTGATTTCTTTGTTGA+TGG 0.386950 1_3:+54604439 Msa0125840:CDS
ATCCAACACCAAATTAACTA+TGG 0.387861 1_3:-54604161 None:intergenic
GGATCATATTATTTCGTGCT+TGG 0.390606 1_3:+54603555 Msa0125840:CDS
AACTAGCAATTTGGTGATGA+TGG 0.392035 1_3:-54604488 None:intergenic
GAACTGGCTCAATATCAAAT+AGG 0.394193 1_3:-54602287 None:intergenic
GTTCCTGTGGAAAGGCTAAC+AGG 0.396841 1_3:-54602987 None:intergenic
TTAGAGCCTGCATTTGGCTC+AGG 0.401778 1_3:-54603214 None:intergenic
CTTTGTAGTTAGTTCTCGTT+CGG 0.401965 1_3:-54604845 None:intergenic
AACATCAAATCTAGAATAAG+AGG 0.405447 1_3:-54604343 None:intergenic
GAAAAGAGTTGGCCAGCATT+AGG 0.407138 1_3:+54602739 Msa0125840:CDS
AGAAGGCTAGAAGCTTTGAT+TGG 0.408094 1_3:+54604751 Msa0125840:CDS
CGCTGTGACTCGATATTTGT+AGG 0.409793 1_3:-54604970 None:intergenic
TTTCCAAACCAAGCGGTTGC+TGG 0.410881 1_3:+54605121 Msa0125840:CDS
AAAATTCTATTAACAAGGAT+TGG 0.412160 1_3:+54603243 Msa0125840:CDS
TGCCAATTGTATCTCTTCTC+TGG 0.415239 1_3:-54602118 None:intergenic
CTGCTCCAAGAAAACAAATT+CGG 0.420958 1_3:-54602799 None:intergenic
GACTCTAGAGCAACTCTAGC+AGG 0.426038 1_3:-54602348 None:intergenic
AGCTGTAATTCCTTTAGAAC+TGG 0.426952 1_3:-54602303 None:intergenic
CGACAATGATAATGTACAAA+TGG 0.431176 1_3:+54604789 Msa0125840:CDS
GATACCGTTATCTCGATCCT+TGG 0.434218 1_3:+54603287 Msa0125840:CDS
TTAAGAATCAATACTTTGAA+AGG 0.434740 1_3:+54602871 Msa0125840:CDS
ACTACAAAGTTGATTGAAAT+GGG 0.437763 1_3:+54604859 Msa0125840:CDS
AAGGAAATGGTGGAATACTA+TGG 0.438629 1_3:+54605453 Msa0125840:CDS
TGATATTGAGCCAGTTCTAA+AGG 0.439774 1_3:+54602293 Msa0125840:CDS
GGCATTTGCAAGTTCGAGAC+TGG 0.440948 1_3:+54604571 Msa0125840:CDS
CATGAGCAGTTCTCAAGACT+TGG 0.442224 1_3:-54602212 None:intergenic
ATGGAGACGGACACCTTAGA+AGG 0.442619 1_3:+54605523 Msa0125840:CDS
AGACCTTTCTTTATCAGCCC+TGG 0.443666 1_3:+54604264 Msa0125840:CDS
GATTTAAACTTGATACAACT+TGG 0.449112 1_3:+54604184 Msa0125840:CDS
TTGCAAGTTCGAGACTGGTT+TGG 0.450043 1_3:+54604576 Msa0125840:CDS
ACCAATAGGTACAATATTAA+CGG 0.452804 1_3:+54602179 Msa0125840:CDS
CTATCATGAGCTGCACATAA+AGG 0.455630 1_3:-54605165 None:intergenic
TCTTCATCATCTGCAATCTC+TGG 0.456840 1_3:+54605588 Msa0125840:CDS
GTAGAATCACACGACTAGAT+AGG 0.463205 1_3:-54605752 None:intergenic
CAAGTCAAAATCTCCAATAA+AGG 0.465556 1_3:-54605372 None:intergenic
TACTTTCATAGTAAATGATC+AGG 0.470018 1_3:+54606007 Msa0125840:three_prime_UTR
GACCTTTCTTTATCAGCCCT+GGG 0.470312 1_3:+54604265 Msa0125840:CDS
CTAGCCTTCTAGGCTTGAAA+AGG 0.472124 1_3:-54604738 None:intergenic
ATTTCTTTGTTGATGGAGAA+GGG 0.472359 1_3:+54604446 Msa0125840:CDS
AAGGTAATTGTAATATATAC+TGG 0.472848 1_3:+54606078 Msa0125840:three_prime_UTR
TTGGGGTAGTGAGTCACTTA+AGG 0.479262 1_3:+54605392 Msa0125840:CDS
GGTCCTTCACAAGGGTTACA+AGG 0.481227 1_3:-54603699 None:intergenic
CTCTAGAGCTGATGCAGCAA+GGG 0.481825 1_3:+54602836 Msa0125840:CDS
TAGATTTGATGTTCTCTCCT+CGG 0.486570 1_3:+54604353 Msa0125840:CDS
TAAGAATCAATACTTTGAAA+GGG 0.486686 1_3:+54602872 Msa0125840:CDS
TGCAAGGGCAGTTGGCGTGC+CGG 0.487076 1_3:+54602698 Msa0125840:CDS
GGATTGGAACTCATACCAAT+AGG 0.487791 1_3:+54602165 Msa0125840:CDS
CGTTTCCAGGGTCCTTCACA+AGG 0.487815 1_3:-54603708 None:intergenic
TATTGGAAAAGAGAGTTTCA+AGG 0.490061 1_3:+54602251 Msa0125840:CDS
CCTATCTCGGATGGTTCCAC+CGG 0.490488 1_3:-54602717 None:intergenic
ACGAAGGTTGTGACCTGAGT+TGG 0.490630 1_3:-54604524 None:intergenic
GCTATCGAGAATTTCTGATC+AGG 0.493655 1_3:+54602536 Msa0125840:CDS
TTGAGAAAATCAACAAGTAA+AGG 0.494414 1_3:-54605018 None:intergenic
AAGGGATATTGGAAGGTCTC+TGG 0.494510 1_3:+54602485 Msa0125840:CDS
GATGCAAAGGGTTGAGTTCG+AGG 0.494531 1_3:+54602578 Msa0125840:CDS
AGCCATAGTTAATTTGGTGT+TGG 0.494995 1_3:+54604159 Msa0125840:CDS
GTATGTCATTCGCGAAAGCC+TGG 0.495334 1_3:-54602665 None:intergenic
AAGGGAATTATTGCTTCCTC+CGG 0.497226 1_3:+54604313 Msa0125840:CDS
CTAGCTGATCGCATGATTCG+AGG 0.500921 1_3:+54603826 Msa0125840:CDS
CCTTAGAAGGAAAGCTGCTA+AGG 0.501027 1_3:+54605536 Msa0125840:CDS
AACGTTAAAGCTCTCGAAGA+AGG 0.504766 1_3:+54605729 Msa0125840:three_prime_UTR
CTCTGTCATTGGACTTCCCA+AGG 0.507482 1_3:-54603304 None:intergenic
TCAGCCCTGGGTAAACTAGC+TGG 0.507504 1_3:+54604277 Msa0125840:CDS
TTGGAAATAACTGTGAGCTT+TGG 0.507616 1_3:-54605105 None:intergenic
GACTACAAGGTGAGATGCAA+AGG 0.508604 1_3:+54602565 Msa0125840:CDS
GAGGAGATTGCAAGGGCAGT+TGG 0.509609 1_3:+54602690 Msa0125840:CDS
ATAAGTGAGAACACAGAAAG+AGG 0.510077 1_3:-54605952 None:intergenic
TTCCAGAGAAGAGATACAAT+TGG 0.512392 1_3:+54602116 Msa0125840:five_prime_UTR
GATTTCTTTGTTGATGGAGA+AGG 0.512649 1_3:+54604445 Msa0125840:CDS
ATACCGTTATCTCGATCCTT+GGG 0.513686 1_3:+54603288 Msa0125840:CDS
AGCTGGATCTCATGCTAACA+AGG 0.519513 1_3:+54604294 Msa0125840:CDS
TCTACTTGCTAGTTAAATGC+CGG 0.520480 1_3:+54602433 Msa0125840:CDS
TCATAGTAAATGATCAGGAT+AGG 0.520748 1_3:+54606012 Msa0125840:three_prime_UTR
CTTCCCAAGGATCGAGATAA+CGG 0.521135 1_3:-54603291 None:intergenic
CCTTTGATAGAAATGATGTC+TGG 0.521661 1_3:+54604226 Msa0125840:CDS
TGTATTACAATTACCTTGCA+GGG 0.521692 1_3:-54606110 None:intergenic
TAGAGCCTGCATTTGGCTCA+GGG 0.522213 1_3:-54603213 None:intergenic
AATGTACAAATGGCTGCAGC+TGG 0.523529 1_3:+54604799 Msa0125840:CDS
AGGACTAAGAGATCAGAAAC+AGG 0.524044 1_3:+54602641 Msa0125840:CDS
TTTGAAACTTCTGTGAGGTA+AGG 0.525655 1_3:+54601748 Msa0125840:five_prime_UTR
CCGGTGGAACCATCCGAGAT+AGG 0.527413 1_3:+54602717 Msa0125840:CDS
TATCATTGTCGTCGTTCTCG+AGG 0.528609 1_3:-54604777 None:intergenic
CGGCAAAGGAAAGAATTAAG+AGG 0.530404 1_3:-54602939 None:intergenic
AGAGATCAGCTATTGAAGGT+TGG 0.530598 1_3:+54603018 Msa0125840:CDS
TTGGAAGCAAATGCTTTACC+TGG 0.532479 1_3:+54605219 Msa0125840:CDS
ACCGGATTCAAGAATATCAA+TGG 0.533121 1_3:+54604132 Msa0125840:CDS
AAACTTGATACAACTTGGAA+AGG 0.535362 1_3:+54604189 Msa0125840:CDS
AATACAAACACTTTCTACAT+TGG 0.535747 1_3:+54605290 Msa0125840:CDS
GCAATTGCAGCAGCTTTCAT+CGG 0.538108 1_3:+54605063 Msa0125840:CDS
TCACTGCTGCTAATTGTGGC+TGG 0.538398 1_3:+54603794 Msa0125840:CDS
TGTGAGAGATCAGCTATTGA+AGG 0.539191 1_3:+54603014 Msa0125840:CDS
GGAATTATTGCTTCCTCCGG+AGG 0.539312 1_3:+54604316 Msa0125840:CDS
TGATGTTCTCTCCTCGGACA+AGG 0.543610 1_3:+54604359 Msa0125840:CDS
CAGCTCCATTTATGCGGCAA+AGG 0.544531 1_3:-54602953 None:intergenic
CCAGACATCATTTCTATCAA+AGG 0.545276 1_3:-54604226 None:intergenic
TTGATACAACTTGGAAAGGA+AGG 0.545563 1_3:+54604193 Msa0125840:CDS
AGGAAGTTGAGCAAGTTACA+AGG 0.548285 1_3:+54602466 Msa0125840:CDS
TCTTGAAGCAGATGTTAAAA+GGG 0.550180 1_3:+54602371 Msa0125840:CDS
AAACTTTCTTCTTCTGACGA+TGG 0.550475 1_3:+54604418 Msa0125840:CDS
AGAATCCCTGAGCCAAATGC+AGG 0.550783 1_3:+54603208 Msa0125840:CDS
GATAGAGAGATACGATTCAA+AGG 0.551367 1_3:+54602902 Msa0125840:CDS
GAGTTGCTTCAAGAAAGATC+TGG 0.552357 1_3:+54603622 Msa0125840:CDS
AATTGGCTGAATCACAAGGA+TGG 0.555747 1_3:+54603533 Msa0125840:CDS
GATCCTGTTAGCCTTTCCAC+AGG 0.555922 1_3:+54602984 Msa0125840:CDS
GATAAAGCTGTTACATGGTG+AGG 0.558362 1_3:+54605245 Msa0125840:CDS
TACCCAGGGCTGATAAAGAA+AGG 0.560311 1_3:-54604267 None:intergenic
GTCTCCATAAATATTACTGC+CGG 0.561473 1_3:-54605508 None:intergenic
CACATGTAGTTCCTGTGGAA+AGG 0.563701 1_3:-54602995 None:intergenic
TTCTCTCAGCATGAACCAGA+AGG 0.565766 1_3:+54604703 Msa0125840:CDS
GTAACCCTTGTGAAGGACCC+TGG 0.565954 1_3:+54603703 Msa0125840:CDS
AGCTGAAAATTCTATTAACA+AGG 0.570382 1_3:+54603238 Msa0125840:CDS
ATTGGCTGAATCACAAGGAT+GGG 0.570651 1_3:+54603534 Msa0125840:CDS
ATTGGAAGAGCATCCGCAGA+GGG 0.571893 1_3:+54605314 Msa0125840:CDS
AAAGGAAAGAATTAAGAGGT+TGG 0.572084 1_3:-54602935 None:intergenic
ACTTTGAAAGATGTTGTAGA+GGG 0.572945 1_3:+54603350 Msa0125840:CDS
CCAAGAAGAGCACGTAGCGT+TGG 0.573594 1_3:-54604550 None:intergenic
AAAGCAATTCTTGCAGCCAA+TGG 0.574145 1_3:+54604604 Msa0125840:CDS
GAGTCAGAATCATCAAGAAG+TGG 0.574190 1_3:-54604643 None:intergenic
CAAGGATTGGATCTCTATTG+GGG 0.575873 1_3:+54603256 Msa0125840:CDS
TTGCTCAACTTCCTCGACAA+TGG 0.577351 1_3:-54602457 None:intergenic
TTGTTCTTGGATATTGGCGT+CGG 0.577610 1_3:+54605859 Msa0125840:three_prime_UTR
CCTCTGCTGAATCGTTTCCA+GGG 0.579125 1_3:-54603720 None:intergenic
GCTGAGAGAAAAGAAAGAGC+AGG 0.581887 1_3:-54604690 None:intergenic
TGCTTCAAGAAAGATCTGGT+TGG 0.583477 1_3:+54603626 Msa0125840:CDS
ATTTAACTAGCAAGTAGAAA+CGG 0.583722 1_3:-54602428 None:intergenic
GGCAGTAATATTTATGGAGA+CGG 0.583777 1_3:+54605510 Msa0125840:CDS
AGAGAAGAGATACAATTGGC+AGG 0.584067 1_3:+54602120 Msa0125840:five_prime_UTR
TAGAATAAGAGGAACACCTC+CGG 0.584174 1_3:-54604332 None:intergenic
CACTTTGAAAGATGTTGTAG+AGG 0.586417 1_3:+54603349 Msa0125840:CDS
AAGGGCAGTTGGCGTGCCGG+TGG 0.588235 1_3:+54602701 Msa0125840:CDS
ATTGTCACTGCTGCTAATTG+TGG 0.588383 1_3:+54603790 Msa0125840:CDS
TTGCAACAGAATTCCAACTC+AGG 0.589919 1_3:+54604511 Msa0125840:CDS
TCGCGTTTGATTTGTTTGAC+CGG 0.589935 1_3:+54605489 Msa0125840:CDS
TAACCTTGTAACCCTTGTGA+AGG 0.590842 1_3:+54603696 Msa0125840:CDS
ATCCGAGATAGGAAAAGAGT+TGG 0.592571 1_3:+54602728 Msa0125840:CDS
CGAATCATGCGATCAGCTAG+TGG 0.593637 1_3:-54603823 None:intergenic
AGAGTTGGCCAGCATTAGGA+AGG 0.594767 1_3:+54602743 Msa0125840:CDS
GAGAAATTGGCTGAATCACA+AGG 0.594803 1_3:+54603529 Msa0125840:CDS
GCAGGTTTATAGCAGTCTCT+CGG 0.596490 1_3:-54604672 None:intergenic
ACTACAAGGTGAGATGCAAA+GGG 0.597147 1_3:+54602566 Msa0125840:CDS
GATCAGGTTGATAGACTACA+AGG 0.597370 1_3:+54602552 Msa0125840:CDS
ACATACTTGAGGAGATTGCA+AGG 0.599820 1_3:+54602682 Msa0125840:CDS
CACGTAGCGTTGGCTTACGA+AGG 0.602202 1_3:-54604540 None:intergenic
TCTCTAGAGCTGATGCAGCA+AGG 0.604293 1_3:+54602835 Msa0125840:CDS
CGTAAACCTAATTACCTGCA+AGG 0.606045 1_3:-54606145 None:intergenic
TACAGGTTCAATCACTGCAA+AGG 0.608049 1_3:+54605041 Msa0125840:CDS
TTCCAATAGACAAAATGTTG+TGG 0.608354 1_3:-54605202 None:intergenic
GAGATCCAGCTAGTTTACCC+AGG 0.610834 1_3:-54604282 None:intergenic
AAGTTACAAGGGATATTGGA+AGG 0.611170 1_3:+54602478 Msa0125840:CDS
CTCACAGAAGTTTCAAACTG+TGG 0.611272 1_3:-54601742 None:intergenic
TCTCTCACATGTAGTTCCTG+TGG 0.611431 1_3:-54603000 None:intergenic
TGGAAACGATTCAGCAGAGG+TGG 0.613714 1_3:+54603723 Msa0125840:CDS
CAACTTCCTCGACAATGGAC+CGG 0.616683 1_3:-54602452 None:intergenic
GGTTTGATAAAGCTGTTACA+TGG 0.619938 1_3:+54605240 Msa0125840:CDS
AAGCAACTCTAACATTTCCA+AGG 0.624995 1_3:+54603579 Msa0125840:CDS
AAGAATTAGAGATACGCCAT+TGG 0.628175 1_3:-54604620 None:intergenic
CAAATATGAAAATCAGACAA+TGG 0.629875 1_3:-54605661 None:intergenic
TAAGACAATCGATCGAAGAG+TGG 0.630519 1_3:+54603117 Msa0125840:CDS
AAGAGATCAGAAACAGGACC+AGG 0.632504 1_3:+54602647 Msa0125840:CDS
TTCTTGAAGATACTAGCTTG+AGG 0.637093 1_3:+54603081 Msa0125840:CDS
AGATCCAGCTAGTTTACCCA+GGG 0.639000 1_3:-54604281 None:intergenic
GGATTGGATCTCTATTGGGG+AGG 0.641735 1_3:+54603259 Msa0125840:CDS
TGTAACAGCTTTATCAAACC+AGG 0.642306 1_3:-54605237 None:intergenic
CAGAAGAAGAAAGTTTCTCG+AGG 0.644334 1_3:-54604411 None:intergenic
CCATAACAGCTCCATTTATG+CGG 0.644599 1_3:-54602959 None:intergenic
ATTGTTGACAAGTTGAACCA+AGG 0.644614 1_3:+54602621 Msa0125840:CDS
GGAAGTTGAGCAAGTTACAA+GGG 0.644907 1_3:+54602467 Msa0125840:CDS
AACTGATCCAGAAACACAAG+AGG 0.645279 1_3:+54603058 Msa0125840:CDS
AGAGGGGCATGCAAGAAACA+AGG 0.645650 1_3:+54603367 Msa0125840:CDS
CCCTGGAAACGATTCAGCAG+AGG 0.647958 1_3:+54603720 Msa0125840:CDS
TTTCGCGAATGACATACTTG+AGG 0.650871 1_3:+54602671 Msa0125840:CDS
GTTTCCAGGGTCCTTCACAA+GGG 0.658541 1_3:-54603707 None:intergenic
TAAATGCCGGTCCATTGTCG+AGG 0.660709 1_3:+54602446 Msa0125840:CDS
ACAGTTATTTCCAAACCAAG+CGG 0.662952 1_3:+54605114 Msa0125840:CDS
CTTTGAAAGATGTTGTAGAG+GGG 0.675379 1_3:+54603351 Msa0125840:CDS
GAAACTCTAGGCCATAAAGT+CGG 0.676751 1_3:+54605622 Msa0125840:exon
AATAAGAGGAACACCTCCGG+AGG 0.680566 1_3:-54604329 None:intergenic
GTAATGAATGACCTTGTCCG+AGG 0.681100 1_3:-54604370 None:intergenic
TATGAGTTCCAATCCTACCA+TGG 0.683552 1_3:-54602157 None:intergenic
GCTGGATCTCATGCTAACAA+GGG 0.684666 1_3:+54604295 Msa0125840:CDS
ACAAAGTTGATTGAAATGGG+AGG 0.690277 1_3:+54604862 Msa0125840:CDS
CAGCGCGATTTGGTTAAACG+CGG 0.693546 1_3:+54604988 Msa0125840:CDS
AACAAACGAGCACCCCTCTG+CGG 0.694775 1_3:-54605327 None:intergenic
CACAGTTTGAAACTTCTGTG+AGG 0.697984 1_3:+54601743 Msa0125840:five_prime_UTR
CATACTTGAGGAGATTGCAA+GGG 0.701171 1_3:+54602683 Msa0125840:CDS
CTAGCAAGTAGAAACGGCCA+CGG 0.705648 1_3:-54602422 None:intergenic
AATAGGTACAATATTAACGG+TGG 0.707550 1_3:+54602182 Msa0125840:CDS
GGTGGAATACTATGGAACGA+CGG 0.715990 1_3:+54605461 Msa0125840:CDS
GTTGAGAAGTACAAGAACCG+TGG 0.724475 1_3:+54602405 Msa0125840:CDS
TATTGGAAGAGCATCCGCAG+AGG 0.727150 1_3:+54605313 Msa0125840:CDS
TTGGAAGAGCATCCGCAGAG+GGG 0.744656 1_3:+54605315 Msa0125840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATTATGTAAAATTATATA+TGG + chr1_3:54601971-54601990 Msa0125840:intron 10.0%
!! TTAATTTACATTTAAGAATT+AGG - chr1_3:54605896-54605915 None:intergenic 10.0%
!! AACTATAATTTATCATGTTA+AGG - chr1_3:54601912-54601931 None:intergenic 15.0%
!!! ATTTTCATATTTGATCTATT+AGG + chr1_3:54605671-54605690 Msa0125840:three_prime_UTR 15.0%
!!! ATGACTTATTCTAGAATTAA+TGG + chr1_3:54602038-54602057 Msa0125840:intron 20.0%
!! TTAAGAATCAATACTTTGAA+AGG + chr1_3:54602871-54602890 Msa0125840:CDS 20.0%
!!! TAAGAATCAATACTTTGAAA+GGG + chr1_3:54602872-54602891 Msa0125840:CDS 20.0%
!!! TCAATTATTGTCTTTTGATA+AGG + chr1_3:54603147-54603166 Msa0125840:CDS 20.0%
!! AAAATTCTATTAACAAGGAT+TGG + chr1_3:54603243-54603262 Msa0125840:CDS 20.0%
!! CATTTGCATAAAAATGTAAT+AGG + chr1_3:54603507-54603526 Msa0125840:intron 20.0%
!! AAAAATGTAATAGGAGAAAT+TGG + chr1_3:54603516-54603535 Msa0125840:intron 20.0%
!!! ATCATAAGCATTTTAAAAAC+AGG + chr1_3:54604895-54604914 Msa0125840:CDS 20.0%
!!! ACAAATTAATCTTTCAAGTT+AGG - chr1_3:54605777-54605796 None:intergenic 20.0%
!!! TCTTTTTCTTTGTATAAACA+AGG - chr1_3:54605819-54605838 None:intergenic 20.0%
!! AAGGTAATTGTAATATATAC+TGG + chr1_3:54606078-54606097 Msa0125840:three_prime_UTR 20.0%
!!! TTATTCTAGAATTAATGGAC+TGG + chr1_3:54602043-54602062 Msa0125840:intron 25.0%
!!! TATTTTTTATGCTCTACAAG+AGG + chr1_3:54602073-54602092 Msa0125840:five_prime_UTR 25.0%
! ACCAATAGGTACAATATTAA+CGG + chr1_3:54602179-54602198 Msa0125840:CDS 25.0%
! ATTTAACTAGCAAGTAGAAA+CGG - chr1_3:54602431-54602450 None:intergenic 25.0%
!! AATTTAACGACAAATTTTCC+CGG - chr1_3:54603178-54603197 None:intergenic 25.0%
! AGCTGAAAATTCTATTAACA+AGG + chr1_3:54603238-54603257 Msa0125840:CDS 25.0%
! GATTTAAACTTGATACAACT+TGG + chr1_3:54604184-54604203 Msa0125840:CDS 25.0%
!! AACATCAAATCTAGAATAAG+AGG - chr1_3:54604346-54604365 None:intergenic 25.0%
!! AACTACAAAGTTGATTGAAA+TGG + chr1_3:54604858-54604877 Msa0125840:CDS 25.0%
!! ACTACAAAGTTGATTGAAAT+GGG + chr1_3:54604859-54604878 Msa0125840:CDS 25.0%
!!! CATTTTAAAAACAGGCAAAA+TGG + chr1_3:54604903-54604922 Msa0125840:CDS 25.0%
! TTGAGAAAATCAACAAGTAA+AGG - chr1_3:54605021-54605040 None:intergenic 25.0%
! AATACAAACACTTTCTACAT+TGG + chr1_3:54605290-54605309 Msa0125840:CDS 25.0%
!!! TTTATTGGAGATTTTGACTT+GGG + chr1_3:54605374-54605393 Msa0125840:CDS 25.0%
! CAAATATGAAAATCAGACAA+TGG - chr1_3:54605664-54605683 None:intergenic 25.0%
! TACTTTCATAGTAAATGATC+AGG + chr1_3:54606007-54606026 Msa0125840:three_prime_UTR 25.0%
! CTACAAGAGGATTGATTTAT+AGG + chr1_3:54602086-54602105 Msa0125840:five_prime_UTR 30.0%
! AGGTGTATAGATTTTTACCA+TGG + chr1_3:54602140-54602159 Msa0125840:exon 30.0%
! GTATAGATTTTTACCATGGT+AGG + chr1_3:54602144-54602163 Msa0125840:exon 30.0%
ACCGTTAATATTGTACCTAT+TGG - chr1_3:54602183-54602202 None:intergenic 30.0%
AATAGGTACAATATTAACGG+TGG + chr1_3:54602182-54602201 Msa0125840:CDS 30.0%
TATTGGAAAAGAGAGTTTCA+AGG + chr1_3:54602251-54602270 Msa0125840:CDS 30.0%
TCTTGAAGCAGATGTTAAAA+GGG + chr1_3:54602371-54602390 Msa0125840:CDS 30.0%
TGTTAAAAGGGCGAATAATA+TGG + chr1_3:54602383-54602402 Msa0125840:CDS 30.0%
!! AAAAGCCGAATTTGTTTTCT+TGG + chr1_3:54602794-54602813 Msa0125840:CDS 30.0%
AAAGGAAAGAATTAAGAGGT+TGG - chr1_3:54602938-54602957 None:intergenic 30.0%
!!! ATTGAAGGTTGGTTTTATGA+TGG + chr1_3:54603029-54603048 Msa0125840:CDS 30.0%
! ACTTTGAAAGATGTTGTAGA+GGG + chr1_3:54603350-54603369 Msa0125840:CDS 30.0%
TCATGAATACTAAATCTCAG+TGG - chr1_3:54603421-54603440 None:intergenic 30.0%
!! CTTATTTCTATAAGCTCATC+CGG + chr1_3:54603957-54603976 Msa0125840:intron 30.0%
!! AGTTGTTTTCATAAGCTATC+CGG - chr1_3:54603979-54603998 None:intergenic 30.0%
ATATAATCTACTATGACCCT+AGG - chr1_3:54604081-54604100 None:intergenic 30.0%
ATCCAACACCAAATTAACTA+TGG - chr1_3:54604164-54604183 None:intergenic 30.0%
AAACTTGATACAACTTGGAA+AGG + chr1_3:54604189-54604208 Msa0125840:CDS 30.0%
! GGAATTGATTTCTTTGTTGA+TGG + chr1_3:54604439-54604458 Msa0125840:CDS 30.0%
! ATTTCTTTGTTGATGGAGAA+GGG + chr1_3:54604446-54604465 Msa0125840:CDS 30.0%
! CGACAATGATAATGTACAAA+TGG + chr1_3:54604789-54604808 Msa0125840:CDS 30.0%
!!! CTTGTTGATTTTCTCAATAC+AGG + chr1_3:54605024-54605043 Msa0125840:CDS 30.0%
TTCCAATAGACAAAATGTTG+TGG - chr1_3:54605205-54605224 None:intergenic 30.0%
AACACTTTCTACATTGGTAT+TGG + chr1_3:54605296-54605315 Msa0125840:CDS 30.0%
AAATGCAATGAGACCTTTAT+TGG + chr1_3:54605359-54605378 Msa0125840:CDS 30.0%
CAAGTCAAAATCTCCAATAA+AGG - chr1_3:54605375-54605394 None:intergenic 30.0%
!!! CTTTATTGGAGATTTTGACT+TGG + chr1_3:54605373-54605392 Msa0125840:CDS 30.0%
!!! TTATTGGAGATTTTGACTTG+GGG + chr1_3:54605375-54605394 Msa0125840:CDS 30.0%
ACTAAGTTGTTCTTGGATAT+TGG + chr1_3:54605853-54605872 Msa0125840:three_prime_UTR 30.0%
! AGTGTTTTCTATTACTTGCA+AGG + chr1_3:54605984-54606003 Msa0125840:three_prime_UTR 30.0%
TCATAGTAAATGATCAGGAT+AGG + chr1_3:54606012-54606031 Msa0125840:three_prime_UTR 30.0%
TACAAAACCTCAAAAACAGA+AGG + chr1_3:54606059-54606078 Msa0125840:three_prime_UTR 30.0%
!!! ACAATTACCTTCTGTTTTTG+AGG - chr1_3:54606069-54606088 None:intergenic 30.0%
TGTATTACAATTACCTTGCA+GGG - chr1_3:54606113-54606132 None:intergenic 30.0%
TTGTATTACAATTACCTTGC+AGG - chr1_3:54606114-54606133 None:intergenic 30.0%
TAATTACCTTGCAGGTAATT+AGG + chr1_3:54606139-54606158 Msa0125840:three_prime_UTR 30.0%
! TTTGAAACTTCTGTGAGGTA+AGG + chr1_3:54601748-54601767 Msa0125840:five_prime_UTR 35.0%
TGTAACAATCTTGAAGAGAG+TGG - chr1_3:54601782-54601801 None:intergenic 35.0%
TTCCAGAGAAGAGATACAAT+TGG + chr1_3:54602116-54602135 Msa0125840:five_prime_UTR 35.0%
! GATTTTTACCATGGTAGGAT+TGG + chr1_3:54602149-54602168 Msa0125840:exon 35.0%
! GAACTGGCTCAATATCAAAT+AGG - chr1_3:54602290-54602309 None:intergenic 35.0%
! TGATATTGAGCCAGTTCTAA+AGG + chr1_3:54602293-54602312 Msa0125840:CDS 35.0%
!! AGCTGTAATTCCTTTAGAAC+TGG - chr1_3:54602306-54602325 None:intergenic 35.0%
CTCTTGAAGCAGATGTTAAA+AGG + chr1_3:54602370-54602389 Msa0125840:CDS 35.0%
! TCTACTTGCTAGTTAAATGC+CGG + chr1_3:54602433-54602452 Msa0125840:CDS 35.0%
AAGTTACAAGGGATATTGGA+AGG + chr1_3:54602478-54602497 Msa0125840:CDS 35.0%
! ATTGTTGACAAGTTGAACCA+AGG + chr1_3:54602621-54602640 Msa0125840:CDS 35.0%
! TTCTTTTTCCTTCCTAATGC+TGG - chr1_3:54602754-54602773 None:intergenic 35.0%
AAAAAGAAGAAGCTGCGAAT+AGG + chr1_3:54602766-54602785 Msa0125840:CDS 35.0%
CTGCTCCAAGAAAACAAATT+CGG - chr1_3:54602802-54602821 None:intergenic 35.0%
! TCAATACTTTGAAAGGGTTC+AGG + chr1_3:54602878-54602897 Msa0125840:CDS 35.0%
GATAGAGAGATACGATTCAA+AGG + chr1_3:54602902-54602921 Msa0125840:CDS 35.0%
! TTCTTGAAGATACTAGCTTG+AGG + chr1_3:54603081-54603100 Msa0125840:CDS 35.0%
! GTCTTTTGATAAGGTCTATC+CGG + chr1_3:54603156-54603175 Msa0125840:CDS 35.0%
! TCTTTTGATAAGGTCTATCC+GGG + chr1_3:54603157-54603176 Msa0125840:CDS 35.0%
AACAAGGATTGGATCTCTAT+TGG + chr1_3:54603254-54603273 Msa0125840:CDS 35.0%
ACAAGGATTGGATCTCTATT+GGG + chr1_3:54603255-54603274 Msa0125840:CDS 35.0%
! CACTTTGAAAGATGTTGTAG+AGG + chr1_3:54603349-54603368 Msa0125840:CDS 35.0%
! CTTTGAAAGATGTTGTAGAG+GGG + chr1_3:54603351-54603370 Msa0125840:CDS 35.0%
GGATCATATTATTTCGTGCT+TGG + chr1_3:54603555-54603574 Msa0125840:CDS 35.0%
AAGCAACTCTAACATTTCCA+AGG + chr1_3:54603579-54603598 Msa0125840:CDS 35.0%
TAACAAATCAATTGCTGCCT+TGG - chr1_3:54603599-54603618 None:intergenic 35.0%
TCACTTATATGTCAAGTCCT+AGG + chr1_3:54604061-54604080 Msa0125840:intron 35.0%
CACTTATATGTCAAGTCCTA+GGG + chr1_3:54604062-54604081 Msa0125840:intron 35.0%
ACCGGATTCAAGAATATCAA+TGG + chr1_3:54604132-54604151 Msa0125840:CDS 35.0%
GCCATTGATATTCTTGAATC+CGG - chr1_3:54604136-54604155 None:intergenic 35.0%
GGCAAAAGCCATAGTTAATT+TGG + chr1_3:54604153-54604172 Msa0125840:CDS 35.0%
!! AGCCATAGTTAATTTGGTGT+TGG + chr1_3:54604159-54604178 Msa0125840:CDS 35.0%
TTGATACAACTTGGAAAGGA+AGG + chr1_3:54604193-54604212 Msa0125840:CDS 35.0%
CCAGACATCATTTCTATCAA+AGG - chr1_3:54604229-54604248 None:intergenic 35.0%
CCTTTGATAGAAATGATGTC+TGG + chr1_3:54604226-54604245 Msa0125840:CDS 35.0%
TAGATTTGATGTTCTCTCCT+CGG + chr1_3:54604353-54604372 Msa0125840:CDS 35.0%
AGAAAGTTTCTCGAGGATTT+CGG - chr1_3:54604407-54604426 None:intergenic 35.0%
AAACTTTCTTCTTCTGACGA+TGG + chr1_3:54604418-54604437 Msa0125840:CDS 35.0%
! GATTTCTTTGTTGATGGAGA+AGG + chr1_3:54604445-54604464 Msa0125840:CDS 35.0%
!! AACTAGCAATTTGGTGATGA+TGG - chr1_3:54604491-54604510 None:intergenic 35.0%
CTGTTGCAAAACTAGCAATT+TGG - chr1_3:54604500-54604519 None:intergenic 35.0%
AAGAATTAGAGATACGCCAT+TGG - chr1_3:54604623-54604642 None:intergenic 35.0%
!! AATACCTTTTCAAGCCTAGA+AGG + chr1_3:54604734-54604753 Msa0125840:CDS 35.0%
! CTTTGTAGTTAGTTCTCGTT+CGG - chr1_3:54604848-54604867 None:intergenic 35.0%
! ACAAAGTTGATTGAAATGGG+AGG + chr1_3:54604862-54604881 Msa0125840:CDS 35.0%
TTGGAAATAACTGTGAGCTT+TGG - chr1_3:54605108-54605127 None:intergenic 35.0%
! ACAGTTATTTCCAAACCAAG+CGG + chr1_3:54605114-54605133 Msa0125840:CDS 35.0%
! GACCACAACATTTTGTCTAT+TGG + chr1_3:54605200-54605219 Msa0125840:CDS 35.0%
! TGTAACAGCTTTATCAAACC+AGG - chr1_3:54605240-54605259 None:intergenic 35.0%
GGTTTGATAAAGCTGTTACA+TGG + chr1_3:54605240-54605259 Msa0125840:CDS 35.0%
! GGTTTTTGTGTCAAAGGAAA+TGG + chr1_3:54605440-54605459 Msa0125840:CDS 35.0%
! TTTTGTGTCAAAGGAAATGG+TGG + chr1_3:54605443-54605462 Msa0125840:CDS 35.0%
! AAGGAAATGGTGGAATACTA+TGG + chr1_3:54605453-54605472 Msa0125840:CDS 35.0%
TTGACCGGCAGTAATATTTA+TGG + chr1_3:54605504-54605523 Msa0125840:CDS 35.0%
GTCTCCATAAATATTACTGC+CGG - chr1_3:54605511-54605530 None:intergenic 35.0%
GGCAGTAATATTTATGGAGA+CGG + chr1_3:54605510-54605529 Msa0125840:CDS 35.0%
CATTGCTTGAACGTTATTCT+AGG + chr1_3:54605565-54605584 Msa0125840:CDS 35.0%
AGATGTCACTAAGTTGTTCT+TGG + chr1_3:54605846-54605865 Msa0125840:three_prime_UTR 35.0%
ATAAGTGAGAACACAGAAAG+AGG - chr1_3:54605955-54605974 None:intergenic 35.0%
ATTACCTGCAAGGTAATTAG+AGG - chr1_3:54606138-54606157 None:intergenic 35.0%
CTCACAGAAGTTTCAAACTG+TGG - chr1_3:54601745-54601764 None:intergenic 40.0%
! CACAGTTTGAAACTTCTGTG+AGG + chr1_3:54601743-54601762 Msa0125840:five_prime_UTR 40.0%
TGCCAATTGTATCTCTTCTC+TGG - chr1_3:54602121-54602140 None:intergenic 40.0%
AGAGAAGAGATACAATTGGC+AGG + chr1_3:54602120-54602139 Msa0125840:five_prime_UTR 40.0%
TATGAGTTCCAATCCTACCA+TGG - chr1_3:54602160-54602179 None:intergenic 40.0%
GGATTGGAACTCATACCAAT+AGG + chr1_3:54602165-54602184 Msa0125840:CDS 40.0%
AGGAAGTTGAGCAAGTTACA+AGG + chr1_3:54602466-54602485 Msa0125840:CDS 40.0%
GGAAGTTGAGCAAGTTACAA+GGG + chr1_3:54602467-54602486 Msa0125840:CDS 40.0%
GAGCAAGTTACAAGGGATAT+TGG + chr1_3:54602474-54602493 Msa0125840:CDS 40.0%
GCTATCGAGAATTTCTGATC+AGG + chr1_3:54602536-54602555 Msa0125840:CDS 40.0%
!! GATCAGGTTGATAGACTACA+AGG + chr1_3:54602552-54602571 Msa0125840:CDS 40.0%
ACTACAAGGTGAGATGCAAA+GGG + chr1_3:54602566-54602585 Msa0125840:CDS 40.0%
GTTTCTGATCTCTTAGTCCT+TGG - chr1_3:54602641-54602660 None:intergenic 40.0%
AGGACTAAGAGATCAGAAAC+AGG + chr1_3:54602641-54602660 Msa0125840:CDS 40.0%
TTTCGCGAATGACATACTTG+AGG + chr1_3:54602671-54602690 Msa0125840:CDS 40.0%
ACATACTTGAGGAGATTGCA+AGG + chr1_3:54602682-54602701 Msa0125840:CDS 40.0%
CATACTTGAGGAGATTGCAA+GGG + chr1_3:54602683-54602702 Msa0125840:CDS 40.0%
! AACTCTTTTCCTATCTCGGA+TGG - chr1_3:54602729-54602748 None:intergenic 40.0%
ATCCGAGATAGGAAAAGAGT+TGG + chr1_3:54602728-54602747 Msa0125840:CDS 40.0%
CGGCAAAGGAAAGAATTAAG+AGG - chr1_3:54602942-54602961 None:intergenic 40.0%
TCTTTCCTTTGCCGCATAAA+TGG + chr1_3:54602948-54602967 Msa0125840:CDS 40.0%
CCATAACAGCTCCATTTATG+CGG - chr1_3:54602962-54602981 None:intergenic 40.0%
TGTGAGAGATCAGCTATTGA+AGG + chr1_3:54603014-54603033 Msa0125840:CDS 40.0%
AGAGATCAGCTATTGAAGGT+TGG + chr1_3:54603018-54603037 Msa0125840:CDS 40.0%
AACTGATCCAGAAACACAAG+AGG + chr1_3:54603058-54603077 Msa0125840:CDS 40.0%
TCAAGAACCTCTTGTGTTTC+TGG - chr1_3:54603068-54603087 None:intergenic 40.0%
TCTTCGATCGATTGTCTTAG+TGG - chr1_3:54603116-54603135 None:intergenic 40.0%
TAAGACAATCGATCGAAGAG+TGG + chr1_3:54603117-54603136 Msa0125840:CDS 40.0%
CAAGGATTGGATCTCTATTG+GGG + chr1_3:54603256-54603275 Msa0125840:CDS 40.0%
ATACCGTTATCTCGATCCTT+GGG + chr1_3:54603288-54603307 Msa0125840:CDS 40.0%
CATCTTCACTTCTCTGTCAT+TGG - chr1_3:54603318-54603337 None:intergenic 40.0%
ATATGTCAAACCTGCAATCG+CGG + chr1_3:54603465-54603484 Msa0125840:intron 40.0%
GAGAAATTGGCTGAATCACA+AGG + chr1_3:54603529-54603548 Msa0125840:CDS 40.0%
AATTGGCTGAATCACAAGGA+TGG + chr1_3:54603533-54603552 Msa0125840:CDS 40.0%
ATTGGCTGAATCACAAGGAT+GGG + chr1_3:54603534-54603553 Msa0125840:CDS 40.0%
GAGTTGCTTCAAGAAAGATC+TGG + chr1_3:54603622-54603641 Msa0125840:CDS 40.0%
TGCTTCAAGAAAGATCTGGT+TGG + chr1_3:54603626-54603645 Msa0125840:CDS 40.0%
TAACCTTGTAACCCTTGTGA+AGG + chr1_3:54603696-54603715 Msa0125840:CDS 40.0%
! GGTGGCGAAGAAAATTTTGA+TGG + chr1_3:54603741-54603760 Msa0125840:CDS 40.0%
ATTGTCACTGCTGCTAATTG+TGG + chr1_3:54603790-54603809 Msa0125840:CDS 40.0%
AAGGGAATTATTGCTTCCTC+CGG + chr1_3:54604313-54604332 Msa0125840:CDS 40.0%
TAGAATAAGAGGAACACCTC+CGG - chr1_3:54604335-54604354 None:intergenic 40.0%
CAGAAGAAGAAAGTTTCTCG+AGG - chr1_3:54604414-54604433 None:intergenic 40.0%
TTGCAACAGAATTCCAACTC+AGG + chr1_3:54604511-54604530 Msa0125840:CDS 40.0%
AAAGCAATTCTTGCAGCCAA+TGG + chr1_3:54604604-54604623 Msa0125840:CDS 40.0%
GAGTCAGAATCATCAAGAAG+TGG - chr1_3:54604646-54604665 None:intergenic 40.0%
AGGTATTCAACTACTCCTTC+TGG - chr1_3:54604721-54604740 None:intergenic 40.0%
! ATCAAAGCTTCTAGCCTTCT+AGG - chr1_3:54604751-54604770 None:intergenic 40.0%
! AGAAGGCTAGAAGCTTTGAT+TGG + chr1_3:54604751-54604770 Msa0125840:CDS 40.0%
!! GTTAGTTCTCGTTCGGATTT+TGG - chr1_3:54604841-54604860 None:intergenic 40.0%
TACAGGTTCAATCACTGCAA+AGG + chr1_3:54605041-54605060 Msa0125840:CDS 40.0%
CTATCATGAGCTGCACATAA+AGG - chr1_3:54605168-54605187 None:intergenic 40.0%
TTGGAAGCAAATGCTTTACC+TGG + chr1_3:54605219-54605238 Msa0125840:CDS 40.0%
GATAAAGCTGTTACATGGTG+AGG + chr1_3:54605245-54605264 Msa0125840:CDS 40.0%
TCACTTAAGGCAGAAGCTTT+AGG + chr1_3:54605405-54605424 Msa0125840:CDS 40.0%
!!! AGCTTTAGGACTTTTGGAGA+AGG + chr1_3:54605419-54605438 Msa0125840:CDS 40.0%
! GGAGAAGGTTTTTGTGTCAA+AGG + chr1_3:54605434-54605453 Msa0125840:CDS 40.0%
!! TCGCGTTTGATTTGTTTGAC+CGG + chr1_3:54605489-54605508 Msa0125840:CDS 40.0%
TCTTCATCATCTGCAATCTC+TGG + chr1_3:54605588-54605607 Msa0125840:CDS 40.0%
!!! ATCTGCAATCTCTGGAGTTT+TGG + chr1_3:54605596-54605615 Msa0125840:CDS 40.0%
!!! GAGTTTTGGAGTGAAACTCT+AGG + chr1_3:54605610-54605629 Msa0125840:exon 40.0%
GAAACTCTAGGCCATAAAGT+CGG + chr1_3:54605622-54605641 Msa0125840:exon 40.0%
GCAAATCTGTTCCGACTTTA+TGG - chr1_3:54605636-54605655 None:intergenic 40.0%
AACGTTAAAGCTCTCGAAGA+AGG + chr1_3:54605729-54605748 Msa0125840:three_prime_UTR 40.0%
GTAGAATCACACGACTAGAT+AGG - chr1_3:54605755-54605774 None:intergenic 40.0%
TTGTTCTTGGATATTGGCGT+CGG + chr1_3:54605859-54605878 Msa0125840:three_prime_UTR 40.0%
CAAACCTCTAATTACCTTGC+AGG + chr1_3:54606131-54606150 Msa0125840:three_prime_UTR 40.0%
CGTAAACCTAATTACCTGCA+AGG - chr1_3:54606148-54606167 None:intergenic 40.0%
CATGAGCAGTTCTCAAGACT+TGG - chr1_3:54602215-54602234 None:intergenic 45.0%
GCAGCAGCTGATGTTCTTAT+TGG + chr1_3:54602234-54602253 Msa0125840:CDS 45.0%
! GTTGAGAAGTACAAGAACCG+TGG + chr1_3:54602405-54602424 Msa0125840:CDS 45.0%
TTGCTCAACTTCCTCGACAA+TGG - chr1_3:54602460-54602479 None:intergenic 45.0%
AAGGGATATTGGAAGGTCTC+TGG + chr1_3:54602485-54602504 Msa0125840:CDS 45.0%
GACTACAAGGTGAGATGCAA+AGG + chr1_3:54602565-54602584 Msa0125840:CDS 45.0%
AAGAGATCAGAAACAGGACC+AGG + chr1_3:54602647-54602666 Msa0125840:CDS 45.0%
! GGCCAACTCTTTTCCTATCT+CGG - chr1_3:54602733-54602752 None:intergenic 45.0%
GAAAAGAGTTGGCCAGCATT+AGG + chr1_3:54602739-54602758 Msa0125840:CDS 45.0%
CCGCATAAATGGAGCTGTTA+TGG + chr1_3:54602959-54602978 Msa0125840:CDS 45.0%
CACATGTAGTTCCTGTGGAA+AGG - chr1_3:54602998-54603017 None:intergenic 45.0%
TCTCTCACATGTAGTTCCTG+TGG - chr1_3:54603003-54603022 None:intergenic 45.0%
CAGCTATTAGAGCCTGCATT+TGG - chr1_3:54603223-54603242 None:intergenic 45.0%
GATACCGTTATCTCGATCCT+TGG + chr1_3:54603287-54603306 Msa0125840:CDS 45.0%
CTTCCCAAGGATCGAGATAA+CGG - chr1_3:54603294-54603313 None:intergenic 45.0%
TATGTCAAACCTGCAATCGC+GGG + chr1_3:54603466-54603485 Msa0125840:intron 45.0%
TCGCATGATTCGAGGTAAGA+AGG + chr1_3:54603834-54603853 Msa0125840:intron 45.0%
ATCCTGCTTCTTCTCTTCTC+AGG + chr1_3:54604109-54604128 Msa0125840:intron 45.0%
AGACCTTTCTTTATCAGCCC+TGG + chr1_3:54604264-54604283 Msa0125840:CDS 45.0%
GACCTTTCTTTATCAGCCCT+GGG + chr1_3:54604265-54604284 Msa0125840:CDS 45.0%
TACCCAGGGCTGATAAAGAA+AGG - chr1_3:54604270-54604289 None:intergenic 45.0%
! AGATCCAGCTAGTTTACCCA+GGG - chr1_3:54604284-54604303 None:intergenic 45.0%
AGCTGGATCTCATGCTAACA+AGG + chr1_3:54604294-54604313 Msa0125840:CDS 45.0%
GCTGGATCTCATGCTAACAA+GGG + chr1_3:54604295-54604314 Msa0125840:CDS 45.0%
GTAATGAATGACCTTGTCCG+AGG - chr1_3:54604373-54604392 None:intergenic 45.0%
! TTGCAAGTTCGAGACTGGTT+TGG + chr1_3:54604576-54604595 Msa0125840:CDS 45.0%
GCAGGTTTATAGCAGTCTCT+CGG - chr1_3:54604675-54604694 None:intergenic 45.0%
GCTGAGAGAAAAGAAAGAGC+AGG - chr1_3:54604693-54604712 None:intergenic 45.0%
TTCTCTCAGCATGAACCAGA+AGG + chr1_3:54604703-54604722 Msa0125840:CDS 45.0%
! CTAGCCTTCTAGGCTTGAAA+AGG - chr1_3:54604741-54604760 None:intergenic 45.0%
TATCATTGTCGTCGTTCTCG+AGG - chr1_3:54604780-54604799 None:intergenic 45.0%
AATGTACAAATGGCTGCAGC+TGG + chr1_3:54604799-54604818 Msa0125840:CDS 45.0%
!! GTTCTCGTTCGGATTTTGGT+AGG - chr1_3:54604837-54604856 None:intergenic 45.0%
CGCTGTGACTCGATATTTGT+AGG - chr1_3:54604973-54604992 None:intergenic 45.0%
GCAATTGCAGCAGCTTTCAT+CGG + chr1_3:54605063-54605082 Msa0125840:CDS 45.0%
TTGAAAAACCAGCAACCGCT+TGG - chr1_3:54605132-54605151 None:intergenic 45.0%
TTGGGGTAGTGAGTCACTTA+AGG + chr1_3:54605392-54605411 Msa0125840:CDS 45.0%
!!! GGCAGAAGCTTTAGGACTTT+TGG + chr1_3:54605413-54605432 Msa0125840:CDS 45.0%
GGTGGAATACTATGGAACGA+CGG + chr1_3:54605461-54605480 Msa0125840:CDS 45.0%
CCTTAGCAGCTTTCCTTCTA+AGG - chr1_3:54605539-54605558 None:intergenic 45.0%
CCTTAGAAGGAAAGCTGCTA+AGG + chr1_3:54605536-54605555 Msa0125840:CDS 45.0%
!! CTGGCTTATTTTTCCCTGCA+AGG + chr1_3:54606097-54606116 Msa0125840:three_prime_UTR 45.0%
!! GACTCTAGAGCAACTCTAGC+AGG - chr1_3:54602351-54602370 None:intergenic 50.0%
CTAGCAAGTAGAAACGGCCA+CGG - chr1_3:54602425-54602444 None:intergenic 50.0%
TAAATGCCGGTCCATTGTCG+AGG + chr1_3:54602446-54602465 Msa0125840:CDS 50.0%
CAACTTCCTCGACAATGGAC+CGG - chr1_3:54602455-54602474 None:intergenic 50.0%
GATGCAAAGGGTTGAGTTCG+AGG + chr1_3:54602578-54602597 Msa0125840:CDS 50.0%
GTATGTCATTCGCGAAAGCC+TGG - chr1_3:54602668-54602687 None:intergenic 50.0%
AGAGTTGGCCAGCATTAGGA+AGG + chr1_3:54602743-54602762 Msa0125840:CDS 50.0%
!! TCTCTAGAGCTGATGCAGCA+AGG + chr1_3:54602835-54602854 Msa0125840:CDS 50.0%
!! CTCTAGAGCTGATGCAGCAA+GGG + chr1_3:54602836-54602855 Msa0125840:CDS 50.0%
CAGCTCCATTTATGCGGCAA+AGG - chr1_3:54602956-54602975 None:intergenic 50.0%
!! GATCCTGTTAGCCTTTCCAC+AGG + chr1_3:54602984-54603003 Msa0125840:CDS 50.0%
GTTCCTGTGGAAAGGCTAAC+AGG - chr1_3:54602990-54603009 None:intergenic 50.0%
AGAATCCCTGAGCCAAATGC+AGG + chr1_3:54603208-54603227 Msa0125840:CDS 50.0%
! TAGAGCCTGCATTTGGCTCA+GGG - chr1_3:54603216-54603235 None:intergenic 50.0%
! TTAGAGCCTGCATTTGGCTC+AGG - chr1_3:54603217-54603236 None:intergenic 50.0%
GGATTGGATCTCTATTGGGG+AGG + chr1_3:54603259-54603278 Msa0125840:CDS 50.0%
CTCTGTCATTGGACTTCCCA+AGG - chr1_3:54603307-54603326 None:intergenic 50.0%
! AGAGGGGCATGCAAGAAACA+AGG + chr1_3:54603367-54603386 Msa0125840:CDS 50.0%
ATGTCAAACCTGCAATCGCG+GGG + chr1_3:54603467-54603486 Msa0125840:intron 50.0%
AAATTAGTCCCCGCGATTGC+AGG - chr1_3:54603478-54603497 None:intergenic 50.0%
GGTCCTTCACAAGGGTTACA+AGG - chr1_3:54603702-54603721 None:intergenic 50.0%
GTTTCCAGGGTCCTTCACAA+GGG - chr1_3:54603710-54603729 None:intergenic 50.0%
CCTCTGCTGAATCGTTTCCA+GGG - chr1_3:54603723-54603742 None:intergenic 50.0%
ACCTCTGCTGAATCGTTTCC+AGG - chr1_3:54603724-54603743 None:intergenic 50.0%
TGGAAACGATTCAGCAGAGG+TGG + chr1_3:54603723-54603742 Msa0125840:CDS 50.0%
TCACTGCTGCTAATTGTGGC+TGG + chr1_3:54603794-54603813 Msa0125840:CDS 50.0%
CGAATCATGCGATCAGCTAG+TGG - chr1_3:54603826-54603845 None:intergenic 50.0%
CTAGCTGATCGCATGATTCG+AGG + chr1_3:54603826-54603845 Msa0125840:CDS 50.0%
GTCCTGAGAAGAGAAGAAGC+AGG - chr1_3:54604114-54604133 None:intergenic 50.0%
GCTTCTTCTCTTCTCAGGAC+CGG + chr1_3:54604114-54604133 Msa0125840:intron 50.0%
! GAGATCCAGCTAGTTTACCC+AGG - chr1_3:54604285-54604304 None:intergenic 50.0%
GGAATTATTGCTTCCTCCGG+AGG + chr1_3:54604316-54604335 Msa0125840:CDS 50.0%
AATAAGAGGAACACCTCCGG+AGG - chr1_3:54604332-54604351 None:intergenic 50.0%
TGATGTTCTCTCCTCGGACA+AGG + chr1_3:54604359-54604378 Msa0125840:CDS 50.0%
ACGAAGGTTGTGACCTGAGT+TGG - chr1_3:54604527-54604546 None:intergenic 50.0%
GGCATTTGCAAGTTCGAGAC+TGG + chr1_3:54604571-54604590 Msa0125840:CDS 50.0%
TATCGAGTCACAGCGCGATT+TGG + chr1_3:54604978-54604997 Msa0125840:CDS 50.0%
!! CAGCGCGATTTGGTTAAACG+CGG + chr1_3:54604988-54605007 Msa0125840:CDS 50.0%
TTTCCAAACCAAGCGGTTGC+TGG + chr1_3:54605121-54605140 Msa0125840:CDS 50.0%
AAACCAGCAACCGCTTGGTT+TGG - chr1_3:54605127-54605146 None:intergenic 50.0%
!! TATTGGAAGAGCATCCGCAG+AGG + chr1_3:54605313-54605332 Msa0125840:CDS 50.0%
!! ATTGGAAGAGCATCCGCAGA+GGG + chr1_3:54605314-54605333 Msa0125840:CDS 50.0%
ATGGAGACGGACACCTTAGA+AGG + chr1_3:54605523-54605542 Msa0125840:CDS 50.0%
GAGGAGATTGCAAGGGCAGT+TGG + chr1_3:54602690-54602709 Msa0125840:CDS 55.0%
CCTATCTCGGATGGTTCCAC+CGG - chr1_3:54602720-54602739 None:intergenic 55.0%
GTAACCCTTGTGAAGGACCC+TGG + chr1_3:54603703-54603722 Msa0125840:CDS 55.0%
CGTTTCCAGGGTCCTTCACA+AGG - chr1_3:54603711-54603730 None:intergenic 55.0%
CCCTGGAAACGATTCAGCAG+AGG + chr1_3:54603720-54603739 Msa0125840:CDS 55.0%
TCAGCCCTGGGTAAACTAGC+TGG + chr1_3:54604277-54604296 Msa0125840:CDS 55.0%
!! CACGTAGCGTTGGCTTACGA+AGG - chr1_3:54604543-54604562 None:intergenic 55.0%
! CCAAGAAGAGCACGTAGCGT+TGG - chr1_3:54604553-54604572 None:intergenic 55.0%
CCAACGCTACGTGCTCTTCT+TGG + chr1_3:54604550-54604569 Msa0125840:CDS 55.0%
ACGCTCTCAGTGCACTCTTC+AGG + chr1_3:54604938-54604957 Msa0125840:CDS 55.0%
!! TTGGAAGAGCATCCGCAGAG+GGG + chr1_3:54605315-54605334 Msa0125840:CDS 55.0%
AACAAACGAGCACCCCTCTG+CGG - chr1_3:54605330-54605349 None:intergenic 55.0%
CCGGTGGAACCATCCGAGAT+AGG + chr1_3:54602717-54602736 Msa0125840:CDS 60.0%
TGCAAGGGCAGTTGGCGTGC+CGG + chr1_3:54602698-54602717 Msa0125840:CDS 65.0%
AAGGGCAGTTGGCGTGCCGG+TGG + chr1_3:54602701-54602720 Msa0125840:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 54601706 54606167 54601706 ID=Msa0125840;Name=Msa0125840
chr1_3 mRNA 54601706 54606167 54601706 ID=Msa0125840-mRNA-1;Parent=Msa0125840;Name=Msa0125840-mRNA-1;_AED=0.00;_eAED=0.00;_QI=152|1|1|1|0.66|0.5|4|544|1013
chr1_3 exon 54601706 54601769 54601706 ID=Msa0125840-mRNA-1:exon:16851;Parent=Msa0125840-mRNA-1
chr1_3 exon 54602071 54603388 54602071 ID=Msa0125840-mRNA-1:exon:16852;Parent=Msa0125840-mRNA-1
chr1_3 exon 54603529 54603847 54603529 ID=Msa0125840-mRNA-1:exon:16853;Parent=Msa0125840-mRNA-1
chr1_3 exon 54604131 54606167 54604131 ID=Msa0125840-mRNA-1:exon:16854;Parent=Msa0125840-mRNA-1
chr1_3 five_prime_UTR 54601706 54601769 54601706 ID=Msa0125840-mRNA-1:five_prime_utr;Parent=Msa0125840-mRNA-1
chr1_3 five_prime_UTR 54602071 54602158 54602071 ID=Msa0125840-mRNA-1:five_prime_utr;Parent=Msa0125840-mRNA-1
chr1_3 CDS 54602159 54603388 54602159 ID=Msa0125840-mRNA-1:cds;Parent=Msa0125840-mRNA-1
chr1_3 CDS 54603529 54603847 54603529 ID=Msa0125840-mRNA-1:cds;Parent=Msa0125840-mRNA-1
chr1_3 CDS 54604131 54605623 54604131 ID=Msa0125840-mRNA-1:cds;Parent=Msa0125840-mRNA-1
chr1_3 three_prime_UTR 54605624 54606167 54605624 ID=Msa0125840-mRNA-1:three_prime_utr;Parent=Msa0125840-mRNA-1
Gene Sequence

>Msa0125840

ATGGTAGGATTGGAACTCATACCAATAGGTACAATATTAACGGTGGTAACAAGCCAAGTCTTGAGAACTGCTCATGCAGCAGCTGATGTTCTTATTGGAAAAGAGAGTTTCAAGGCACTTTCGAAATACCTATTTGATATTGAGCCAGTTCTAAAGGAATTACAGCTTCAAGAATTGAATGATTCTCAACCTGCTAGAGTTGCTCTAGAGTCTCTTGAAGCAGATGTTAAAAGGGCGAATAATATGGTTGAGAAGTACAAGAACCGTGGCCGTTTCTACTTGCTAGTTAAATGCCGGTCCATTGTCGAGGAAGTTGAGCAAGTTACAAGGGATATTGGAAGGTCTCTGGCTGCACTGTCTATTGCAAATACTGAAGTGCTATCGAGAATTTCTGATCAGGTTGATAGACTACAAGGTGAGATGCAAAGGGTTGAGTTCGAGGCTTCACAGTCTCAGCTTGAAATTGTTGACAAGTTGAACCAAGGACTAAGAGATCAGAAACAGGACCAGGCTTTCGCGAATGACATACTTGAGGAGATTGCAAGGGCAGTTGGCGTGCCGGTGGAACCATCCGAGATAGGAAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTGCGAATAGGAAAGAAAAAGCCGAATTTGTTTTCTTGGAGCAGATCATTAAGTTACTCTCTAGAGCTGATGCAGCAAGGGATTATGAAGAAGTTAAGAATCAATACTTTGAAAGGGTTCAGGTGATAGAGAGATACGATTCAAAGGAAAAATATATCCAACCTCTTAATTCTTTCCTTTGCCGCATAAATGGAGCTGTTATGGTTGATCCTGTTAGCCTTTCCACAGGAACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGAAACAGAACTGATCCAGAAACACAAGAGGTTCTTGAAGATACTAGCTTGAGGTCAAACATTCCACTAAGACAATCGATCGAAGAGTGGAGAGAACTCAATTATTGTCTTTTGATAAGGTCTATCCGGGAAAATTTGTCGTTAAATTCTGATCTGAAAGAATCCCTGAGCCAAATGCAGGCTCTAATAGCTGAAAATTCTATTAACAAGGATTGGATCTCTATTGGGGAGGTTACTGATACCGTTATCTCGATCCTTGGGAAGTCCAATGACAGAGAAGTGAAGATGAAGATTTTGATCACTTTGAAAGATGTTGTAGAGGGGCATGCAAGAAACAAGGAGAAATTGGCTGAATCACAAGGATGGGATCATATTATTTCGTGCTTGGAAAGCAACTCTAACATTTCCAAGGCAGCAATTGATTTGTTATATGAGTTGCTTCAAGAAAGATCTGGTTGGAATCAATGTTTTTGCAAAAAACTTTCTGAGAACGACACTGCAGTTCTTAACCTTGTAACCCTTGTGAAGGACCCTGGAAACGATTCAGCAGAGGTGGCGAAGAAAATTTTGATGGAGCTTTTTGAAATAAATGAAAGCAGCATTGTCACTGCTGCTAATTGTGGCTGGTATAAGCCACTAGCTGATCGCATGATTCGAGGACCGGATTCAAGAATATCAATGGCAAAAGCCATAGTTAATTTGGTGTTGGATGATTTAAACTTGATACAACTTGGAAAGGAAGGAGTTATAACTCCTTTGATAGAAATGATGTCTGGCAGTATCGAGTCGAAAGACCTTTCTTTATCAGCCCTGGGTAAACTAGCTGGATCTCATGCTAACAAGGGAATTATTGCTTCCTCCGGAGGTGTTCCTCTTATTCTAGATTTGATGTTCTCTCCTCGGACAAGGTCATTCATTACAATTAAATGCTCCGAAATCCTCGAGAAACTTTCTTCTTCTGACGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATCATCACCAAATTGCTAGTTTTGCAACAGAATTCCAACTCAGGTCACAACCTTCGTAAGCCAACGCTACGTGCTCTTCTTGGCATTTGCAAGTTCGAGACTGGTTTGGTGAAGAAAGCAATTCTTGCAGCCAATGGCGTATCTCTAATTCTTCCACTTCTTGATGATTCTGACTCAGAAGTCCGAGAGACTGCTATAAACCTGCTCTTTCTTTTCTCTCAGCATGAACCAGAAGGAGTAGTTGAATACCTTTTCAAGCCTAGAAGGCTAGAAGCTTTGATTGGATTCCTCGAGAACGACGACAATGATAATGTACAAATGGCTGCAGCTGGCTTACTAGCTAACCTACCAAAATCCGAACGAGAACTAACTACAAAGTTGATTGAAATGGGAGGACTTGATGCAATCATAAGCATTTTAAAAACAGGCAAAATGGAAGCAAAAGAAAACGCTCTCAGTGCACTCTTCAGGTTCACAGATCCTACAAATATCGAGTCACAGCGCGATTTGGTTAAACGCGGAATATATCCTTTACTTGTTGATTTTCTCAATACAGGTTCAATCACTGCAAAGGCAATTGCAGCAGCTTTCATCGGCGATCTTTCTATGAGCACACCAAAGCTCACAGTTATTTCCAAACCAAGCGGTTGCTGGTTTTTCAAATCATCGCGCGTTCCTTTATGTGCAGCTCATGATAGCGTATGCAGTGTGACCACAACATTTTGTCTATTGGAAGCAAATGCTTTACCTGGTTTGATAAAGCTGTTACATGGTGAGGTTCATGCAACTGCTTATGAAGCAATACAAACACTTTCTACATTGGTATTGGAAGAGCATCCGCAGAGGGGTGCTCGTTTGTTGCATGAGAAAAATGCAATGAGACCTTTATTGGAGATTTTGACTTGGGGTAGTGAGTCACTTAAGGCAGAAGCTTTAGGACTTTTGGAGAAGGTTTTTGTGTCAAAGGAAATGGTGGAATACTATGGAACGACGGCTAGATCGCGTTTGATTTGTTTGACCGGCAGTAATATTTATGGAGACGGACACCTTAGAAGGAAAGCTGCTAAGGTATTGTCATTGCTTGAACGTTATTCTAGGTCTTCATCATCTGCAATCTCTGGAGTTTTGGAGTGA
Protein sequence

>Msa0125840

MVGLELIPIGTILTVVTSQVLRTAHAAADVLIGKESFKALSKYLFDIEPVLKELQLQELNDSQPARVALESLEADVKRANNMVEKYKNRGRFYLLVKCRSIVEEVEQVTRDIGRSLAALSIANTEVLSRISDQVDRLQGEMQRVEFEASQSQLEIVDKLNQGLRDQKQDQAFANDILEEIARAVGVPVEPSEIGKELASIRKEKEEAANRKEKAEFVFLEQIIKLLSRADAARDYEEVKNQYFERVQVIERYDSKEKYIQPLNSFLCRINGAVMVDPVSLSTGTTCERSAIEGWFYDGNRTDPETQEVLEDTSLRSNIPLRQSIEEWRELNYCLLIRSIRENLSLNSDLKESLSQMQALIAENSINKDWISIGEVTDTVISILGKSNDREVKMKILITLKDVVEGHARNKEKLAESQGWDHIISCLESNSNISKAAIDLLYELLQERSGWNQCFCKKLSENDTAVLNLVTLVKDPGNDSAEVAKKILMELFEINESSIVTAANCGWYKPLADRMIRGPDSRISMAKAIVNLVLDDLNLIQLGKEGVITPLIEMMSGSIESKDLSLSALGKLAGSHANKGIIASSGGVPLILDLMFSPRTRSFITIKCSEILEKLSSSDDGIDFFVDGEGKQLELDSIITKLLVLQQNSNSGHNLRKPTLRALLGICKFETGLVKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGFLENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSITAKAIAAAFIGDLSMSTPKLTVISKPSGCWFFKSSRVPLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEAIQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGSESLKAEALGLLEKVFVSKEMVEYYGTTARSRLICLTGSNIYGDGHLRRKAAKVLSLLERYSRSSSSAISGVLE*