Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030340 | sp|Q5XEP9|KCS2_ARATH | 75.479 | 522 | 115 | 6 | 3 | 516 | 9 | 525 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030340 | A0A072VLT9 | 99.612 | 516 | 2 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030340 | Msa0077940 | 0.933062 | 3.324994e-95 | -8.615850e-47 |
| Msa0030340 | Msa0125850 | 0.964877 | 6.975678e-124 | -8.615850e-47 |
| Msa0030340 | Msa0170480 | 0.995486 | 9.446958e-217 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030340 | MtrunA17_Chr1g0188051 | 99.612 | 516 | 2 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1075 |
| Msa0030340 | MtrunA17_Chr1g0166191 | 84.291 | 522 | 70 | 3 | 1 | 514 | 4 | 521 | 0.0 | 928 |
| Msa0030340 | MtrunA17_Chr4g0063011 | 75.960 | 495 | 119 | 0 | 18 | 512 | 6 | 500 | 0.0 | 808 |
| Msa0030340 | MtrunA17_Chr4g0035081 | 66.258 | 489 | 164 | 1 | 18 | 506 | 15 | 502 | 0.0 | 694 |
| Msa0030340 | MtrunA17_Chr7g0276251 | 65.600 | 500 | 163 | 5 | 17 | 507 | 30 | 529 | 0.0 | 677 |
| Msa0030340 | MtrunA17_Chr2g0306781 | 83.467 | 375 | 62 | 0 | 138 | 512 | 31 | 405 | 0.0 | 659 |
| Msa0030340 | MtrunA17_Chr1g0209881 | 61.258 | 493 | 190 | 1 | 20 | 512 | 5 | 496 | 0.0 | 632 |
| Msa0030340 | MtrunA17_Chr5g0423521 | 58.824 | 493 | 202 | 1 | 20 | 512 | 5 | 496 | 0.0 | 610 |
| Msa0030340 | MtrunA17_Chr6g0480561 | 64.203 | 433 | 154 | 1 | 77 | 508 | 38 | 470 | 0.0 | 592 |
| Msa0030340 | MtrunA17_Chr3g0136561 | 58.315 | 463 | 182 | 3 | 52 | 503 | 438 | 900 | 0.0 | 584 |
| Msa0030340 | MtrunA17_Chr7g0250661 | 84.407 | 295 | 46 | 0 | 218 | 512 | 1 | 295 | 0.0 | 542 |
| Msa0030340 | MtrunA17_Chr2g0282281 | 51.822 | 494 | 227 | 5 | 6 | 498 | 20 | 503 | 2.95e-173 | 498 |
| Msa0030340 | MtrunA17_Chr2g0277841 | 51.707 | 410 | 195 | 3 | 99 | 507 | 45 | 452 | 2.81e-152 | 442 |
| Msa0030340 | MtrunA17_Chr2g0295781 | 50.235 | 426 | 201 | 5 | 87 | 506 | 31 | 451 | 4.52e-152 | 442 |
| Msa0030340 | MtrunA17_Chr7g0276241 | 66.552 | 290 | 90 | 2 | 218 | 505 | 1 | 285 | 7.73e-146 | 420 |
| Msa0030340 | MtrunA17_Chr1g0204301 | 44.608 | 408 | 225 | 1 | 98 | 504 | 77 | 484 | 3.40e-129 | 385 |
| Msa0030340 | MtrunA17_Chr6g0461631 | 66.275 | 255 | 86 | 0 | 253 | 507 | 3 | 257 | 4.55e-126 | 369 |
| Msa0030340 | MtrunA17_Chr3g0115021 | 44.444 | 414 | 222 | 3 | 95 | 504 | 74 | 483 | 1.33e-122 | 368 |
| Msa0030340 | MtrunA17_Chr3g0115041 | 44.444 | 414 | 222 | 3 | 95 | 504 | 74 | 483 | 1.33e-122 | 368 |
| Msa0030340 | MtrunA17_Chr6g0469631 | 44.335 | 406 | 218 | 3 | 103 | 504 | 81 | 482 | 4.82e-116 | 351 |
| Msa0030340 | MtrunA17_Chr4g0026871 | 70.485 | 227 | 66 | 1 | 281 | 506 | 1 | 227 | 1.31e-114 | 338 |
| Msa0030340 | MtrunA17_Chr4g0030591 | 40.995 | 422 | 226 | 4 | 99 | 503 | 27 | 442 | 5.05e-110 | 335 |
| Msa0030340 | MtrunA17_Chr4g0030601 | 41.232 | 422 | 239 | 4 | 88 | 503 | 15 | 433 | 6.37e-110 | 335 |
| Msa0030340 | MtrunA17_Chr2g0327721 | 41.096 | 438 | 232 | 8 | 88 | 505 | 15 | 446 | 2.31e-108 | 331 |
| Msa0030340 | MtrunA17_Chr4g0030581 | 41.204 | 432 | 233 | 6 | 88 | 503 | 15 | 441 | 2.09e-107 | 328 |
| Msa0030340 | MtrunA17_Chr1g0212951 | 38.391 | 435 | 243 | 4 | 91 | 503 | 20 | 451 | 3.45e-107 | 328 |
| Msa0030340 | MtrunA17_Chr4g0026791 | 64.804 | 179 | 62 | 1 | 281 | 458 | 1 | 179 | 6.77e-79 | 244 |
| Msa0030340 | MtrunA17_Chr4g0026721 | 68.553 | 159 | 50 | 0 | 348 | 506 | 1 | 159 | 5.70e-76 | 236 |
| Msa0030340 | MtrunA17_Chr7g0250651 | 60.106 | 188 | 74 | 1 | 7 | 193 | 6 | 193 | 1.67e-74 | 234 |
| Msa0030340 | MtrunA17_Chr6g0461621 | 49.785 | 233 | 111 | 3 | 34 | 265 | 2 | 229 | 1.09e-67 | 217 |
| Msa0030340 | MtrunA17_Chr4g0026861 | 55.556 | 180 | 80 | 0 | 77 | 256 | 36 | 215 | 1.95e-67 | 216 |
| Msa0030340 | MtrunA17_Chr4g0026801 | 49.593 | 123 | 62 | 0 | 77 | 199 | 36 | 158 | 4.90e-36 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030340 | AT1G04220.1 | 75.479 | 522 | 115 | 6 | 3 | 516 | 9 | 525 | 0.0 | 825 |
| Msa0030340 | AT2G26640.1 | 76.768 | 495 | 115 | 0 | 18 | 512 | 15 | 509 | 0.0 | 822 |
| Msa0030340 | AT5G43760.1 | 77.016 | 496 | 108 | 3 | 26 | 515 | 34 | 529 | 0.0 | 776 |
| Msa0030340 | AT1G19440.1 | 66.531 | 490 | 163 | 1 | 15 | 504 | 24 | 512 | 0.0 | 692 |
| Msa0030340 | AT2G16280.1 | 64.898 | 490 | 171 | 1 | 15 | 504 | 20 | 508 | 0.0 | 684 |
| Msa0030340 | AT1G01120.1 | 62.903 | 496 | 178 | 3 | 17 | 506 | 31 | 526 | 0.0 | 678 |
| Msa0030340 | AT4G34510.1 | 63.103 | 477 | 169 | 4 | 31 | 506 | 15 | 485 | 0.0 | 637 |
| Msa0030340 | AT1G68530.1 | 59.838 | 493 | 197 | 1 | 20 | 512 | 6 | 497 | 0.0 | 630 |
| Msa0030340 | AT1G25450.1 | 59.229 | 493 | 200 | 1 | 20 | 512 | 1 | 492 | 0.0 | 618 |
| Msa0030340 | AT2G26250.1 | 56.923 | 520 | 193 | 5 | 13 | 504 | 32 | 548 | 0.0 | 602 |
| Msa0030340 | AT4G34250.1 | 57.025 | 484 | 201 | 3 | 29 | 506 | 5 | 487 | 0.0 | 559 |
| Msa0030340 | AT2G15090.1 | 57.447 | 470 | 190 | 4 | 46 | 506 | 11 | 479 | 0.0 | 550 |
| Msa0030340 | AT4G34520.1 | 56.379 | 486 | 200 | 4 | 32 | 506 | 6 | 490 | 0.0 | 547 |
| Msa0030340 | AT2G46720.1 | 56.757 | 444 | 187 | 3 | 66 | 506 | 24 | 465 | 0.0 | 547 |
| Msa0030340 | AT3G10280.1 | 56.941 | 425 | 168 | 4 | 89 | 506 | 42 | 458 | 0.0 | 525 |
| Msa0030340 | AT1G71160.1 | 48.578 | 422 | 211 | 4 | 84 | 504 | 30 | 446 | 7.75e-150 | 437 |
| Msa0030340 | AT5G49070.1 | 47.196 | 428 | 222 | 3 | 87 | 512 | 36 | 461 | 2.91e-141 | 415 |
| Msa0030340 | AT1G68530.2 | 56.522 | 345 | 148 | 2 | 20 | 363 | 6 | 349 | 1.39e-139 | 407 |
| Msa0030340 | AT3G52160.1 | 43.061 | 490 | 229 | 6 | 6 | 495 | 10 | 449 | 7.02e-139 | 409 |
| Msa0030340 | AT3G52160.2 | 49.041 | 365 | 155 | 2 | 131 | 495 | 3 | 336 | 6.91e-128 | 376 |
| Msa0030340 | AT2G28630.2 | 41.647 | 425 | 219 | 7 | 101 | 503 | 29 | 446 | 1.66e-111 | 339 |
| Msa0030340 | AT2G28630.1 | 41.647 | 425 | 219 | 7 | 101 | 503 | 29 | 446 | 1.66e-111 | 339 |
| Msa0030340 | AT1G07720.1 | 41.026 | 429 | 221 | 6 | 99 | 503 | 27 | 447 | 3.20e-108 | 331 |
| Msa0030340 | AT1G07720.2 | 41.026 | 429 | 221 | 6 | 99 | 503 | 70 | 490 | 4.36e-108 | 332 |
| Msa0030340 | AT5G04530.1 | 38.915 | 424 | 247 | 5 | 89 | 503 | 17 | 437 | 1.54e-106 | 326 |
| Msa0030340 | AT5G49070.2 | 42.294 | 279 | 160 | 1 | 87 | 365 | 36 | 313 | 5.74e-77 | 245 |
Find 112 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACACTCAACTGGTATTT+TGG | 0.148092 | 1_1:+56563290 | Msa0030340:CDS |
| GGCTAAGGATATTGGGATTT+TGG | 0.160476 | 1_1:+56562495 | Msa0030340:CDS |
| GTTAGGAAGAAATTTGTTTA+AGG | 0.174752 | 1_1:+56564032 | Msa0030340:exon |
| TTCACTGATAGAAGAAAATT+TGG | 0.183181 | 1_1:-56561971 | None:intergenic |
| ATTTCTTCTCATCTTCTTCT+TGG | 0.218715 | 1_1:-56563475 | None:intergenic |
| TAACTCTTGGAAAATTTATA+AGG | 0.234565 | 1_1:-56561867 | None:intergenic |
| GTACATGTGTATTCTTGTTT+TGG | 0.247208 | 1_1:-56562247 | None:intergenic |
| TCCACATTTAATTAATCTTT+AGG | 0.260306 | 1_1:+56564067 | Msa0030340:three_prime_UTR |
| TGCTGGTGGAAGAGCTGTTT+TGG | 0.263824 | 1_1:+56563703 | Msa0030340:CDS |
| GGAAGATGGCATTGTTATAA+AGG | 0.271684 | 1_1:-56561670 | None:intergenic |
| CTATTCAGTGTCATTCTTGA+TGG | 0.275990 | 1_1:-56563770 | None:intergenic |
| TTTGCTGTCAGAAGCTTTGT+TGG | 0.296454 | 1_1:-56563378 | None:intergenic |
| GTGAATCATTATAAGTTAAG+AGG | 0.297927 | 1_1:+56562568 | Msa0030340:CDS |
| TGGCAAATTGCATTTGGTTC+TGG | 0.298723 | 1_1:+56563878 | Msa0030340:CDS |
| ATCAAATTGTTTGTTTAGAA+TGG | 0.305639 | 1_1:+56563334 | Msa0030340:CDS |
| ATCACTCTCAAAAGATTTAA+TGG | 0.313780 | 1_1:+56563508 | Msa0030340:CDS |
| TGGTGCTATTGATGAGCTTT+TGG | 0.331199 | 1_1:+56562456 | Msa0030340:CDS |
| ACACTTCTAGTAGTTCATTA+TGG | 0.333772 | 1_1:+56563801 | Msa0030340:CDS |
| GTATAACATATGATATGTTT+TGG | 0.336428 | 1_1:-56561750 | None:intergenic |
| ATGAATAGGTCTGAATTAAC+AGG | 0.348386 | 1_1:+56562283 | Msa0030340:CDS |
| TCCAAACTCTTATGCCTTAG+TGG | 0.348892 | 1_1:+56563253 | Msa0030340:CDS |
| GAACCAATGGTTGCCACTTT+AGG | 0.351358 | 1_1:-56564004 | None:intergenic |
| GCTTCAGCCATACAAGGATT+TGG | 0.353700 | 1_1:-56562406 | None:intergenic |
| GTGTTAAGGCTAAGGATATT+GGG | 0.356405 | 1_1:+56562488 | Msa0030340:CDS |
| AAAATTTATAAGGACTTGTT+TGG | 0.362540 | 1_1:-56561857 | None:intergenic |
| GGTGTTAAGGCTAAGGATAT+TGG | 0.367782 | 1_1:+56562487 | Msa0030340:CDS |
| AACACTATGTACTAGTCTTA+TGG | 0.372563 | 1_1:+56562153 | Msa0030340:CDS |
| ATACTTGAGAGGTCTGGTTT+AGG | 0.382514 | 1_1:+56562343 | Msa0030340:CDS |
| AAGTTATAATCTTGGTGGTA+TGG | 0.383403 | 1_1:+56562600 | Msa0030340:CDS |
| ACCACTAAGGCATAAGAGTT+TGG | 0.387819 | 1_1:-56563254 | None:intergenic |
| AGGACTTGGCAAATTGCATT+TGG | 0.392984 | 1_1:+56563872 | Msa0030340:CDS |
| AGAATGACACTGAATAGATT+TGG | 0.394432 | 1_1:+56563776 | Msa0030340:CDS |
| GAAGATGAGAAGAAATCAAT+TGG | 0.399460 | 1_1:+56563482 | Msa0030340:CDS |
| GTGATTCAAAAGAAACTGAT+TGG | 0.399645 | 1_1:-56561928 | None:intergenic |
| GGTGGAACACTCAATATTGC+TGG | 0.400152 | 1_1:-56562385 | None:intergenic |
| AATGTTCAAAGTTATAATCT+TGG | 0.402519 | 1_1:+56562592 | Msa0030340:CDS |
| TCATGTAACAAATGTTCAAC+TGG | 0.405616 | 1_1:-56564196 | None:intergenic |
| TAGTTCATTATGGTATGAAT+TGG | 0.409549 | 1_1:+56563811 | Msa0030340:CDS |
| TCAAATTGTTTGTTTAGAAT+GGG | 0.411142 | 1_1:+56563335 | Msa0030340:CDS |
| GCCACTTTAGGCACATGAAC+AGG | 0.414943 | 1_1:-56563992 | None:intergenic |
| CACACCGTCCGAACACATAA+AGG | 0.416666 | 1_1:+56563422 | Msa0030340:CDS |
| GAAGATGGCATTGTTATAAA+GGG | 0.417182 | 1_1:-56561669 | None:intergenic |
| AAATTGAAGTAATTAACTCT+TGG | 0.422322 | 1_1:-56561880 | None:intergenic |
| TGATCTTAGTGATTGGCATA+TGG | 0.423434 | 1_1:+56563745 | Msa0030340:CDS |
| GGTGGTATGGGTTGTAGTGC+TGG | 0.424592 | 1_1:+56562613 | Msa0030340:CDS |
| TCAAAAGCTAATTTAAAATC+AGG | 0.424969 | 1_1:-56563665 | None:intergenic |
| TAATTTAAAATCAGGAATGT+AGG | 0.428965 | 1_1:-56563657 | None:intergenic |
| AAAATCTTGATCTTAGTGAT+TGG | 0.430588 | 1_1:+56563738 | Msa0030340:CDS |
| CATATAGTTGAACAATATCA+TGG | 0.436793 | 1_1:-56562102 | None:intergenic |
| AACCATTGGTTCATCAAGTT+AGG | 0.443186 | 1_1:+56564015 | Msa0030340:CDS |
| TTTGGAGAAAACTGGTGTTA+AGG | 0.445941 | 1_1:+56562474 | Msa0030340:CDS |
| GAAGCTGAGGAAGTTATGTT+TGG | 0.456300 | 1_1:+56562436 | Msa0030340:CDS |
| TACTTCAATTTCAATACTCA+TGG | 0.459172 | 1_1:+56561892 | Msa0030340:exon |
| TTCCTTGCTTCAGCCATACA+AGG | 0.461441 | 1_1:-56562412 | None:intergenic |
| GGAGGATTAGAAAAGGTGAT+AGG | 0.461538 | 1_1:+56563852 | Msa0030340:CDS |
| AGTTATAATCTTGGTGGTAT+GGG | 0.463605 | 1_1:+56562601 | Msa0030340:CDS |
| AAGAAAATACTTGAGAGGTC+TGG | 0.464675 | 1_1:+56562337 | Msa0030340:CDS |
| CGTCCGCGCCTTTATGTGTT+CGG | 0.465432 | 1_1:-56563430 | None:intergenic |
| TCAACCAAGTAAACACCTCT+TGG | 0.467981 | 1_1:-56562208 | None:intergenic |
| CCTTGCTAAGCAGCTCCTAC+AGG | 0.473334 | 1_1:+56562651 | Msa0030340:CDS |
| TCCTGTTCATGTGCCTAAAG+TGG | 0.481276 | 1_1:+56563991 | Msa0030340:CDS |
| TGGAGAACATCACACTCAAC+TGG | 0.498098 | 1_1:+56563282 | Msa0030340:CDS |
| GTGGAACACTCAATATTGCT+GGG | 0.499640 | 1_1:-56562384 | None:intergenic |
| AATTTAAAATCAGGAATGTA+GGG | 0.500091 | 1_1:-56563656 | None:intergenic |
| TCTGACATAGGTAGGACTAA+TGG | 0.501024 | 1_1:-56563575 | None:intergenic |
| TTCCTAACTTGATGAACCAA+TGG | 0.503576 | 1_1:-56564017 | None:intergenic |
| TCGTCCAAGAGGTGTTTACT+TGG | 0.505159 | 1_1:+56562204 | Msa0030340:CDS |
| TGAATCATTATAAGTTAAGA+GGG | 0.506304 | 1_1:+56562569 | Msa0030340:CDS |
| TCCTAAAGATTAATTAAATG+TGG | 0.506314 | 1_1:-56564068 | None:intergenic |
| GTTCAAAGTTATAATCTTGG+TGG | 0.515718 | 1_1:+56562595 | Msa0030340:CDS |
| TGGCTTATACTGAAGCTAAA+GGG | 0.515795 | 1_1:+56563831 | Msa0030340:CDS |
| TTAGAAAAGGTGATAGGACT+TGG | 0.517295 | 1_1:+56563858 | Msa0030340:CDS |
| AAACTTAAATATGTGAAACT+TGG | 0.519226 | 1_1:+56561992 | Msa0030340:CDS |
| CGCGCCTTTATGTGTTCGGA+CGG | 0.519941 | 1_1:-56563426 | None:intergenic |
| AAAGATTTAATGGCGGTCGC+CGG | 0.521478 | 1_1:+56563518 | Msa0030340:CDS |
| GAAAACTGGTGTTAAGGCTA+AGG | 0.522687 | 1_1:+56562480 | Msa0030340:CDS |
| TTGGCTTATACTGAAGCTAA+AGG | 0.523513 | 1_1:+56563830 | Msa0030340:CDS |
| TGTTCCACCAAATCCTTGTA+TGG | 0.528304 | 1_1:+56562399 | Msa0030340:CDS |
| GTTCTCCATGCTCACCACTA+AGG | 0.531929 | 1_1:-56563267 | None:intergenic |
| TGGACCAAGTGTTGTGATGT+TGG | 0.537554 | 1_1:-56563555 | None:intergenic |
| TTCAAAAGAAAATACTTGAG+AGG | 0.537603 | 1_1:+56562332 | Msa0030340:CDS |
| TGTCAGAAGCTTTGTTGGAG+AGG | 0.549538 | 1_1:-56563373 | None:intergenic |
| TTTCTCCTTAGCTGGATCAA+CGG | 0.549864 | 1_1:-56563939 | None:intergenic |
| GTGCCTAAAGTGGCAACCAT+TGG | 0.552723 | 1_1:+56564001 | Msa0030340:CDS |
| GCTAAAGGGAGGATTAGAAA+AGG | 0.553131 | 1_1:+56563845 | Msa0030340:CDS |
| AATTGTTTGTTTAGAATGGG+AGG | 0.568502 | 1_1:+56563338 | Msa0030340:CDS |
| TCAGCCATACAAGGATTTGG+TGG | 0.568816 | 1_1:-56562403 | None:intergenic |
| TCATGAATCTCATCCATCCA+TGG | 0.570459 | 1_1:-56563965 | None:intergenic |
| AAAACCAACATCACAACACT+TGG | 0.570838 | 1_1:+56563551 | Msa0030340:CDS |
| AACAGAAGCTGTTCTGACAT+AGG | 0.577420 | 1_1:-56563587 | None:intergenic |
| TTCGGACGGTGTGGATCAGT+TGG | 0.577447 | 1_1:-56563412 | None:intergenic |
| CAAGTGCTTAATTGTGCTAG+AGG | 0.580140 | 1_1:-56561776 | None:intergenic |
| GGCGCGGACGACAGATCATA+CGG | 0.585092 | 1_1:+56563443 | Msa0030340:CDS |
| GAAACAAAATCAAATGAGAG+TGG | 0.588416 | 1_1:-56561818 | None:intergenic |
| GAAGCTGTTCTGACATAGGT+AGG | 0.592086 | 1_1:-56563583 | None:intergenic |
| ATCCTTGTATGGCTGAAGCA+AGG | 0.595750 | 1_1:+56562410 | Msa0030340:CDS |
| GTGCTGTGTGGCGTGCATTG+AGG | 0.597254 | 1_1:+56563915 | Msa0030340:CDS |
| GAGGACCGTTGATCCAGCTA+AGG | 0.607671 | 1_1:+56563934 | Msa0030340:CDS |
| TTATGCCTTAGTGGTGAGCA+TGG | 0.609284 | 1_1:+56563262 | Msa0030340:CDS |
| ATAGCAGAAAGAGAAGGTGT+AGG | 0.612815 | 1_1:-56562541 | None:intergenic |
| CCTGTAGGAGCTGCTTAGCA+AGG | 0.618159 | 1_1:-56562651 | None:intergenic |
| TGAAGCAAGGAAAGAAGCTG+AGG | 0.624018 | 1_1:+56562423 | Msa0030340:CDS |
| AAGTGCTTAATTGTGCTAGA+GGG | 0.628631 | 1_1:-56561775 | None:intergenic |
| CTTTATGTGTTCGGACGGTG+TGG | 0.639949 | 1_1:-56563421 | None:intergenic |
| TGGAACACTCAATATTGCTG+GGG | 0.643916 | 1_1:-56562383 | None:intergenic |
| ACAATCATAGCAGAAAGAGA+AGG | 0.652463 | 1_1:-56562547 | None:intergenic |
| TACTTCATGAGTCGTCCAAG+AGG | 0.658967 | 1_1:+56562193 | Msa0030340:CDS |
| CTTATACTGAAGCTAAAGGG+AGG | 0.665669 | 1_1:+56563834 | Msa0030340:CDS |
| GGAACACTCAATATTGCTGG+GGG | 0.681776 | 1_1:-56562382 | None:intergenic |
| CGTCCGAACACATAAAGGCG+CGG | 0.707110 | 1_1:+56563427 | Msa0030340:CDS |
| ACTCTCAAAAGATTTAATGG+CGG | 0.725346 | 1_1:+56563511 | Msa0030340:CDS |
| TTAAATGTAACAGTGCTGTG+TGG | 0.778579 | 1_1:+56563903 | Msa0030340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATACTATTGTTTAATTTCA+TGG | + | chr1_1:56562696-56562715 | Msa0030340:intron | 15.0% |
| !! | TAATTTCAATGATTTATTCA+TGG | - | chr1_1:56563125-56563144 | None:intergenic | 15.0% |
| !!! | AACATTTTTGTTATATGTAT+AGG | + | chr1_1:56563226-56563245 | Msa0030340:intron | 15.0% |
| !!! | GTATAACATATGATATGTTT+TGG | - | chr1_1:56561753-56561772 | None:intergenic | 20.0% |
| !!! | AAAATTTATAAGGACTTGTT+TGG | - | chr1_1:56561860-56561879 | None:intergenic | 20.0% |
| !! | TAACTCTTGGAAAATTTATA+AGG | - | chr1_1:56561870-56561889 | None:intergenic | 20.0% |
| !! | AAATTGAAGTAATTAACTCT+TGG | - | chr1_1:56561883-56561902 | None:intergenic | 20.0% |
| !! | AAACTTAAATATGTGAAACT+TGG | + | chr1_1:56561992-56562011 | Msa0030340:CDS | 20.0% |
| !!! | TACATTTTCTGATGAAAATT+TGG | + | chr1_1:56562306-56562325 | Msa0030340:CDS | 20.0% |
| !! | TGAATCATTATAAGTTAAGA+GGG | + | chr1_1:56562569-56562588 | Msa0030340:CDS | 20.0% |
| !! | AATGTTCAAAGTTATAATCT+TGG | + | chr1_1:56562592-56562611 | Msa0030340:CDS | 20.0% |
| !!! | TCAAGTTAGAACAAAATTTT+AGG | + | chr1_1:56562772-56562791 | Msa0030340:intron | 20.0% |
| !!! | CAAGTTAGAACAAAATTTTA+GGG | + | chr1_1:56562773-56562792 | Msa0030340:intron | 20.0% |
| !!! | AAGTTAGAACAAAATTTTAG+GGG | + | chr1_1:56562774-56562793 | Msa0030340:intron | 20.0% |
| !!! | TTCAAATTATAGCTTTAAGT+TGG | + | chr1_1:56562802-56562821 | Msa0030340:intron | 20.0% |
| !! | ATCTTTACAATTACAACTAA+GGG | + | chr1_1:56563098-56563117 | Msa0030340:intron | 20.0% |
| !!! | CTATAATAACATGGTATTTT+TGG | - | chr1_1:56563191-56563210 | None:intergenic | 20.0% |
| !!! | ATTGTTTTGCTATAATAACA+TGG | - | chr1_1:56563200-56563219 | None:intergenic | 20.0% |
| !! | ATCAAATTGTTTGTTTAGAA+TGG | + | chr1_1:56563334-56563353 | Msa0030340:CDS | 20.0% |
| !!! | TCAAATTGTTTGTTTAGAAT+GGG | + | chr1_1:56563335-56563354 | Msa0030340:CDS | 20.0% |
| !!! | AATTTAAAATCAGGAATGTA+GGG | - | chr1_1:56563659-56563678 | None:intergenic | 20.0% |
| !!! | TAATTTAAAATCAGGAATGT+AGG | - | chr1_1:56563660-56563679 | None:intergenic | 20.0% |
| !!! | TCAAAAGCTAATTTAAAATC+AGG | - | chr1_1:56563668-56563687 | None:intergenic | 20.0% |
| !! | TCCACATTTAATTAATCTTT+AGG | + | chr1_1:56564067-56564086 | Msa0030340:three_prime_UTR | 20.0% |
| !! | TCCTAAAGATTAATTAAATG+TGG | - | chr1_1:56564071-56564090 | None:intergenic | 20.0% |
| ! | TTGAATGTGATGAAAAAACA+TGG | - | chr1_1:56561694-56561713 | None:intergenic | 25.0% |
| !!! | CATTCAATTCCTTCTTTTTT+TGG | + | chr1_1:56561707-56561726 | Msa0030340:five_prime_UTR | 25.0% |
| ! | AAATGTAGACCAAAAAAAGA+AGG | - | chr1_1:56561719-56561738 | None:intergenic | 25.0% |
| ! | TACTTCAATTTCAATACTCA+TGG | + | chr1_1:56561892-56561911 | Msa0030340:exon | 25.0% |
| ! | TTCACTGATAGAAGAAAATT+TGG | - | chr1_1:56561974-56561993 | None:intergenic | 25.0% |
| !!! | TAGCTTTTGAGATTAAGTAA+TGG | - | chr1_1:56562021-56562040 | None:intergenic | 25.0% |
| ! | CATATAGTTGAACAATATCA+TGG | - | chr1_1:56562105-56562124 | None:intergenic | 25.0% |
| !! | CTAGAGAAATTTTCATGAAT+AGG | + | chr1_1:56562269-56562288 | Msa0030340:CDS | 25.0% |
| ! | TTCAAAAGAAAATACTTGAG+AGG | + | chr1_1:56562332-56562351 | Msa0030340:CDS | 25.0% |
| ! | GTGAATCATTATAAGTTAAG+AGG | + | chr1_1:56562568-56562587 | Msa0030340:CDS | 25.0% |
| !!! | GTTTAATTTCATGGTCATTT+TGG | + | chr1_1:56562705-56562724 | Msa0030340:intron | 25.0% |
| ! | ACCAAAAGTAAATTAAGTAC+TGG | + | chr1_1:56562913-56562932 | Msa0030340:intron | 25.0% |
| !! | ACCAGTACTTAATTTACTTT+TGG | - | chr1_1:56562917-56562936 | None:intergenic | 25.0% |
| !! | TTATTGACTATAGTTTGGTT+GGG | - | chr1_1:56563063-56563082 | None:intergenic | 25.0% |
| !! | ATTATTGACTATAGTTTGGT+TGG | - | chr1_1:56563064-56563083 | None:intergenic | 25.0% |
| !! | TGGTATTATTGACTATAGTT+TGG | - | chr1_1:56563068-56563087 | None:intergenic | 25.0% |
| ! | TAGTTGTAATTGTAAAGATG+TGG | - | chr1_1:56563097-56563116 | None:intergenic | 25.0% |
| ! | CATCTTTACAATTACAACTA+AGG | + | chr1_1:56563097-56563116 | Msa0030340:intron | 25.0% |
| ! | ATCACTCTCAAAAGATTTAA+TGG | + | chr1_1:56563508-56563527 | Msa0030340:CDS | 25.0% |
| ! | AAAATCTTGATCTTAGTGAT+TGG | + | chr1_1:56563738-56563757 | Msa0030340:CDS | 25.0% |
| ! | TAGTTCATTATGGTATGAAT+TGG | + | chr1_1:56563811-56563830 | Msa0030340:CDS | 25.0% |
| !! | GTTAGGAAGAAATTTGTTTA+AGG | + | chr1_1:56564032-56564051 | Msa0030340:exon | 25.0% |
| !! | TCATAGTACACATTTTATGA+AGG | - | chr1_1:56564235-56564254 | None:intergenic | 25.0% |
| GAAGATGGCATTGTTATAAA+GGG | - | chr1_1:56561672-56561691 | None:intergenic | 30.0% | |
| TGATGAAAAAACATGGAAGA+TGG | - | chr1_1:56561687-56561706 | None:intergenic | 30.0% | |
| GAAACAAAATCAAATGAGAG+TGG | - | chr1_1:56561821-56561840 | None:intergenic | 30.0% | |
| GTGATTCAAAAGAAACTGAT+TGG | - | chr1_1:56561931-56561950 | None:intergenic | 30.0% | |
| CAAAAAGTGGTATGAGTAAA+AGG | - | chr1_1:56562048-56562067 | None:intergenic | 30.0% | |
| !! | CTTTTACTCATACCACTTTT+TGG | + | chr1_1:56562046-56562065 | Msa0030340:CDS | 30.0% |
| !! | AACACTATGTACTAGTCTTA+TGG | + | chr1_1:56562153-56562172 | Msa0030340:CDS | 30.0% |
| !! | GTACATGTGTATTCTTGTTT+TGG | - | chr1_1:56562250-56562269 | None:intergenic | 30.0% |
| ATGAATAGGTCTGAATTAAC+AGG | + | chr1_1:56562283-56562302 | Msa0030340:CDS | 30.0% | |
| GTTCAAAGTTATAATCTTGG+TGG | + | chr1_1:56562595-56562614 | Msa0030340:CDS | 30.0% | |
| ! | AAGTTATAATCTTGGTGGTA+TGG | + | chr1_1:56562600-56562619 | Msa0030340:CDS | 30.0% |
| ! | AGTTATAATCTTGGTGGTAT+GGG | + | chr1_1:56562601-56562620 | Msa0030340:CDS | 30.0% |
| TGTTATAACTGCAAGTAACA+TGG | - | chr1_1:56563008-56563027 | None:intergenic | 30.0% | |
| ! | TATTGACTATAGTTTGGTTG+GGG | - | chr1_1:56563062-56563081 | None:intergenic | 30.0% |
| TTGTAAAGATGTGGACAATT+TGG | - | chr1_1:56563088-56563107 | None:intergenic | 30.0% | |
| ! | AATTGTTTGTTTAGAATGGG+AGG | + | chr1_1:56563338-56563357 | Msa0030340:CDS | 30.0% |
| ATTTCTTCTCATCTTCTTCT+TGG | - | chr1_1:56563478-56563497 | None:intergenic | 30.0% | |
| GAAGATGAGAAGAAATCAAT+TGG | + | chr1_1:56563482-56563501 | Msa0030340:CDS | 30.0% | |
| ACTCTCAAAAGATTTAATGG+CGG | + | chr1_1:56563511-56563530 | Msa0030340:CDS | 30.0% | |
| AGAATGACACTGAATAGATT+TGG | + | chr1_1:56563776-56563795 | Msa0030340:CDS | 30.0% | |
| ACACTTCTAGTAGTTCATTA+TGG | + | chr1_1:56563801-56563820 | Msa0030340:CDS | 30.0% | |
| TCATGTAACAAATGTTCAAC+TGG | - | chr1_1:56564199-56564218 | None:intergenic | 30.0% | |
| GGAAGATGGCATTGTTATAA+AGG | - | chr1_1:56561673-56561692 | None:intergenic | 35.0% | |
| AAGTGCTTAATTGTGCTAGA+GGG | - | chr1_1:56561778-56561797 | None:intergenic | 35.0% | |
| ! | GGAAGTTTTCTTCTTTCTTG+AGG | - | chr1_1:56561953-56561972 | None:intergenic | 35.0% |
| AAGAAAATACTTGAGAGGTC+TGG | + | chr1_1:56562337-56562356 | Msa0030340:CDS | 35.0% | |
| ! | TTTGGAGAAAACTGGTGTTA+AGG | + | chr1_1:56562474-56562493 | Msa0030340:CDS | 35.0% |
| GTGTTAAGGCTAAGGATATT+GGG | + | chr1_1:56562488-56562507 | Msa0030340:CDS | 35.0% | |
| ACAATCATAGCAGAAAGAGA+AGG | - | chr1_1:56562550-56562569 | None:intergenic | 35.0% | |
| AAGAATGCAAACTAACCTGT+AGG | - | chr1_1:56562669-56562688 | None:intergenic | 35.0% | |
| GCTTCAAAAAACTTCTCTCA+TGG | - | chr1_1:56562940-56562959 | None:intergenic | 35.0% | |
| TTGGGGCAGTGTATTAAATA+GGG | - | chr1_1:56563045-56563064 | None:intergenic | 35.0% | |
| ! | ATCACACTCAACTGGTATTT+TGG | + | chr1_1:56563290-56563309 | Msa0030340:CDS | 35.0% |
| AAAACCAACATCACAACACT+TGG | + | chr1_1:56563551-56563570 | Msa0030340:CDS | 35.0% | |
| ! | GAGCATTTTTGTATTCATGC+TGG | + | chr1_1:56563686-56563705 | Msa0030340:CDS | 35.0% |
| ! | CATTTTTGTATTCATGCTGG+TGG | + | chr1_1:56563689-56563708 | Msa0030340:CDS | 35.0% |
| !! | AAGAGCTGTTTTGGATGAAT+TGG | + | chr1_1:56563712-56563731 | Msa0030340:CDS | 35.0% |
| TGATCTTAGTGATTGGCATA+TGG | + | chr1_1:56563745-56563764 | Msa0030340:CDS | 35.0% | |
| ! | CTATTCAGTGTCATTCTTGA+TGG | - | chr1_1:56563773-56563792 | None:intergenic | 35.0% |
| TTGGCTTATACTGAAGCTAA+AGG | + | chr1_1:56563830-56563849 | Msa0030340:CDS | 35.0% | |
| TGGCTTATACTGAAGCTAAA+GGG | + | chr1_1:56563831-56563850 | Msa0030340:CDS | 35.0% | |
| TTAGAAAAGGTGATAGGACT+TGG | + | chr1_1:56563858-56563877 | Msa0030340:CDS | 35.0% | |
| TTAAATGTAACAGTGCTGTG+TGG | + | chr1_1:56563903-56563922 | Msa0030340:CDS | 35.0% | |
| TAAGGAGAAAAATCCATGGA+TGG | + | chr1_1:56563952-56563971 | Msa0030340:CDS | 35.0% | |
| !! | AACCATTGGTTCATCAAGTT+AGG | + | chr1_1:56564015-56564034 | Msa0030340:CDS | 35.0% |
| TTCCTAACTTGATGAACCAA+TGG | - | chr1_1:56564020-56564039 | None:intergenic | 35.0% | |
| CAAGTGCTTAATTGTGCTAG+AGG | - | chr1_1:56561779-56561798 | None:intergenic | 40.0% | |
| TCAACCAAGTAAACACCTCT+TGG | - | chr1_1:56562211-56562230 | None:intergenic | 40.0% | |
| ! | ATACTTGAGAGGTCTGGTTT+AGG | + | chr1_1:56562343-56562362 | Msa0030340:CDS | 40.0% |
| TGGAACACTCAATATTGCTG+GGG | - | chr1_1:56562386-56562405 | None:intergenic | 40.0% | |
| GTGGAACACTCAATATTGCT+GGG | - | chr1_1:56562387-56562406 | None:intergenic | 40.0% | |
| TGTTCCACCAAATCCTTGTA+TGG | + | chr1_1:56562399-56562418 | Msa0030340:CDS | 40.0% | |
| GAAGCTGAGGAAGTTATGTT+TGG | + | chr1_1:56562436-56562455 | Msa0030340:CDS | 40.0% | |
| !!! | TGGTGCTATTGATGAGCTTT+TGG | + | chr1_1:56562456-56562475 | Msa0030340:CDS | 40.0% |
| !! | GATGAGCTTTTGGAGAAAAC+TGG | + | chr1_1:56562466-56562485 | Msa0030340:CDS | 40.0% |
| ! | GAAAACTGGTGTTAAGGCTA+AGG | + | chr1_1:56562480-56562499 | Msa0030340:CDS | 40.0% |
| GGTGTTAAGGCTAAGGATAT+TGG | + | chr1_1:56562487-56562506 | Msa0030340:CDS | 40.0% | |
| ! | GGCTAAGGATATTGGGATTT+TGG | + | chr1_1:56562495-56562514 | Msa0030340:CDS | 40.0% |
| ! | ATAGCAGAAAGAGAAGGTGT+AGG | - | chr1_1:56562544-56562563 | None:intergenic | 40.0% |
| AATCTGTACATGTGTGTGTG+TGG | - | chr1_1:56562983-56563002 | None:intergenic | 40.0% | |
| GTTGGGGCAGTGTATTAAAT+AGG | - | chr1_1:56563046-56563065 | None:intergenic | 40.0% | |
| TCCAAACTCTTATGCCTTAG+TGG | + | chr1_1:56563253-56563272 | Msa0030340:CDS | 40.0% | |
| ACCACTAAGGCATAAGAGTT+TGG | - | chr1_1:56563257-56563276 | None:intergenic | 40.0% | |
| ! | TTTGCTGTCAGAAGCTTTGT+TGG | - | chr1_1:56563381-56563400 | None:intergenic | 40.0% |
| TCTGACATAGGTAGGACTAA+TGG | - | chr1_1:56563578-56563597 | None:intergenic | 40.0% | |
| AACAGAAGCTGTTCTGACAT+AGG | - | chr1_1:56563590-56563609 | None:intergenic | 40.0% | |
| !! | GCTTCTGTTTTTCGCAACTT+TGG | + | chr1_1:56563601-56563620 | Msa0030340:CDS | 40.0% |
| CTTATACTGAAGCTAAAGGG+AGG | + | chr1_1:56563834-56563853 | Msa0030340:CDS | 40.0% | |
| GCTAAAGGGAGGATTAGAAA+AGG | + | chr1_1:56563845-56563864 | Msa0030340:CDS | 40.0% | |
| GGAGGATTAGAAAAGGTGAT+AGG | + | chr1_1:56563852-56563871 | Msa0030340:CDS | 40.0% | |
| AGGACTTGGCAAATTGCATT+TGG | + | chr1_1:56563872-56563891 | Msa0030340:CDS | 40.0% | |
| ! | TGGCAAATTGCATTTGGTTC+TGG | + | chr1_1:56563878-56563897 | Msa0030340:CDS | 40.0% |
| TTTCTCCTTAGCTGGATCAA+CGG | - | chr1_1:56563942-56563961 | None:intergenic | 40.0% | |
| ! | CATGGATTTTTCTCCTTAGC+TGG | - | chr1_1:56563950-56563969 | None:intergenic | 40.0% |
| CAGCTAAGGAGAAAAATCCA+TGG | + | chr1_1:56563948-56563967 | Msa0030340:CDS | 40.0% | |
| TCATGAATCTCATCCATCCA+TGG | - | chr1_1:56563968-56563987 | None:intergenic | 40.0% | |
| TACTTCATGAGTCGTCCAAG+AGG | + | chr1_1:56562193-56562212 | Msa0030340:CDS | 45.0% | |
| !! | TCGTCCAAGAGGTGTTTACT+TGG | + | chr1_1:56562204-56562223 | Msa0030340:CDS | 45.0% |
| GGAACACTCAATATTGCTGG+GGG | - | chr1_1:56562385-56562404 | None:intergenic | 45.0% | |
| GGTGGAACACTCAATATTGC+TGG | - | chr1_1:56562388-56562407 | None:intergenic | 45.0% | |
| TCAGCCATACAAGGATTTGG+TGG | - | chr1_1:56562406-56562425 | None:intergenic | 45.0% | |
| GCTTCAGCCATACAAGGATT+TGG | - | chr1_1:56562409-56562428 | None:intergenic | 45.0% | |
| ATCCTTGTATGGCTGAAGCA+AGG | + | chr1_1:56562410-56562429 | Msa0030340:CDS | 45.0% | |
| TTCCTTGCTTCAGCCATACA+AGG | - | chr1_1:56562415-56562434 | None:intergenic | 45.0% | |
| TGAAGCAAGGAAAGAAGCTG+AGG | + | chr1_1:56562423-56562442 | Msa0030340:CDS | 45.0% | |
| ATGTGTGTGTGTGGACAACT+GGG | - | chr1_1:56562974-56562993 | None:intergenic | 45.0% | |
| GGGCAGTGTATTAAATAGGG+TGG | - | chr1_1:56563042-56563061 | None:intergenic | 45.0% | |
| TTATGCCTTAGTGGTGAGCA+TGG | + | chr1_1:56563262-56563281 | Msa0030340:CDS | 45.0% | |
| TGGAGAACATCACACTCAAC+TGG | + | chr1_1:56563282-56563301 | Msa0030340:CDS | 45.0% | |
| !! | TGTCAGAAGCTTTGTTGGAG+AGG | - | chr1_1:56563376-56563395 | None:intergenic | 45.0% |
| AAAGATTTAATGGCGGTCGC+CGG | + | chr1_1:56563518-56563537 | Msa0030340:CDS | 45.0% | |
| !!! | GTTGGTTTTGAGTGCTTCTC+CGG | - | chr1_1:56563540-56563559 | None:intergenic | 45.0% |
| ! | TGGACCAAGTGTTGTGATGT+TGG | - | chr1_1:56563558-56563577 | None:intergenic | 45.0% |
| GAAGCTGTTCTGACATAGGT+AGG | - | chr1_1:56563586-56563605 | None:intergenic | 45.0% | |
| TCCTGTTCATGTGCCTAAAG+TGG | + | chr1_1:56563991-56564010 | Msa0030340:CDS | 45.0% | |
| !! | GAACCAATGGTTGCCACTTT+AGG | - | chr1_1:56564007-56564026 | None:intergenic | 45.0% |
| GCTGAAGCTGCTCCAAAAAG+TGG | - | chr1_1:56562061-56562080 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGGACAACTG+GGG | - | chr1_1:56562973-56562992 | None:intergenic | 50.0% | |
| CATGTGTGTGTGTGGACAAC+TGG | - | chr1_1:56562975-56562994 | None:intergenic | 50.0% | |
| GTTCTCCATGCTCACCACTA+AGG | - | chr1_1:56563270-56563289 | None:intergenic | 50.0% | |
| CTTTATGTGTTCGGACGGTG+TGG | - | chr1_1:56563424-56563443 | None:intergenic | 50.0% | |
| CACACCGTCCGAACACATAA+AGG | + | chr1_1:56563422-56563441 | Msa0030340:CDS | 50.0% | |
| ! | TGCTGGTGGAAGAGCTGTTT+TGG | + | chr1_1:56563703-56563722 | Msa0030340:CDS | 50.0% |
| ! | GCCACTTTAGGCACATGAAC+AGG | - | chr1_1:56563995-56564014 | None:intergenic | 50.0% |
| GTGCCTAAAGTGGCAACCAT+TGG | + | chr1_1:56564001-56564020 | Msa0030340:CDS | 50.0% | |
| ! | GGTGGTATGGGTTGTAGTGC+TGG | + | chr1_1:56562613-56562632 | Msa0030340:CDS | 55.0% |
| CCTGTAGGAGCTGCTTAGCA+AGG | - | chr1_1:56562654-56562673 | None:intergenic | 55.0% | |
| CCTTGCTAAGCAGCTCCTAC+AGG | + | chr1_1:56562651-56562670 | Msa0030340:CDS | 55.0% | |
| TTCGGACGGTGTGGATCAGT+TGG | - | chr1_1:56563415-56563434 | None:intergenic | 55.0% | |
| CGCGCCTTTATGTGTTCGGA+CGG | - | chr1_1:56563429-56563448 | None:intergenic | 55.0% | |
| CGTCCGAACACATAAAGGCG+CGG | + | chr1_1:56563427-56563446 | Msa0030340:CDS | 55.0% | |
| CGTCCGCGCCTTTATGTGTT+CGG | - | chr1_1:56563433-56563452 | None:intergenic | 55.0% | |
| GAGGACCGTTGATCCAGCTA+AGG | + | chr1_1:56563934-56563953 | Msa0030340:CDS | 55.0% | |
| GGCGCGGACGACAGATCATA+CGG | + | chr1_1:56563443-56563462 | Msa0030340:CDS | 60.0% | |
| GTGCTGTGTGGCGTGCATTG+AGG | + | chr1_1:56563915-56563934 | Msa0030340:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 56561655 | 56564332 | 56561655 | ID=Msa0030340;Name=Msa0030340 |
| chr1_1 | mRNA | 56561655 | 56564332 | 56561655 | ID=Msa0030340-mRNA-1;Parent=Msa0030340;Name=Msa0030340-mRNA-1;_AED=0.01;_eAED=0.01;_QI=256|1|1|1|1|1|2|296|516 |
| chr1_1 | exon | 56561655 | 56562672 | 56561655 | ID=Msa0030340-mRNA-1:exon:16955;Parent=Msa0030340-mRNA-1 |
| chr1_1 | exon | 56563248 | 56564332 | 56563248 | ID=Msa0030340-mRNA-1:exon:16956;Parent=Msa0030340-mRNA-1 |
| chr1_1 | five_prime_UTR | 56561655 | 56561910 | 56561655 | ID=Msa0030340-mRNA-1:five_prime_utr;Parent=Msa0030340-mRNA-1 |
| chr1_1 | CDS | 56561911 | 56562672 | 56561911 | ID=Msa0030340-mRNA-1:cds;Parent=Msa0030340-mRNA-1 |
| chr1_1 | CDS | 56563248 | 56564036 | 56563248 | ID=Msa0030340-mRNA-1:cds;Parent=Msa0030340-mRNA-1 |
| chr1_1 | three_prime_UTR | 56564037 | 56564332 | 56564037 | ID=Msa0030340-mRNA-1:three_prime_utr;Parent=Msa0030340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
