Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125850 | sp|Q5XEP9|KCS2_ARATH | 75.479 | 522 | 115 | 6 | 3 | 516 | 9 | 525 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125850 | A0A072VLT9 | 99.612 | 516 | 2 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030340 | Msa0125850 | 0.964877 | 6.975678e-124 | -8.615850e-47 |
| Msa0077940 | Msa0125850 | 0.871143 | 8.554469e-67 | -8.615850e-47 |
| Msa0125850 | Msa0170480 | 0.964814 | 8.391464e-124 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125850 | MtrunA17_Chr1g0188051 | 99.612 | 516 | 2 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1075 |
| Msa0125850 | MtrunA17_Chr1g0166191 | 84.291 | 522 | 70 | 3 | 1 | 514 | 4 | 521 | 0.0 | 928 |
| Msa0125850 | MtrunA17_Chr4g0063011 | 75.960 | 495 | 119 | 0 | 18 | 512 | 6 | 500 | 0.0 | 808 |
| Msa0125850 | MtrunA17_Chr4g0035081 | 66.258 | 489 | 164 | 1 | 18 | 506 | 15 | 502 | 0.0 | 694 |
| Msa0125850 | MtrunA17_Chr7g0276251 | 65.600 | 500 | 163 | 5 | 17 | 507 | 30 | 529 | 0.0 | 677 |
| Msa0125850 | MtrunA17_Chr2g0306781 | 83.467 | 375 | 62 | 0 | 138 | 512 | 31 | 405 | 0.0 | 659 |
| Msa0125850 | MtrunA17_Chr1g0209881 | 61.258 | 493 | 190 | 1 | 20 | 512 | 5 | 496 | 0.0 | 632 |
| Msa0125850 | MtrunA17_Chr5g0423521 | 58.824 | 493 | 202 | 1 | 20 | 512 | 5 | 496 | 0.0 | 610 |
| Msa0125850 | MtrunA17_Chr6g0480561 | 64.203 | 433 | 154 | 1 | 77 | 508 | 38 | 470 | 0.0 | 592 |
| Msa0125850 | MtrunA17_Chr3g0136561 | 58.315 | 463 | 182 | 3 | 52 | 503 | 438 | 900 | 0.0 | 584 |
| Msa0125850 | MtrunA17_Chr7g0250661 | 84.407 | 295 | 46 | 0 | 218 | 512 | 1 | 295 | 0.0 | 542 |
| Msa0125850 | MtrunA17_Chr2g0282281 | 51.822 | 494 | 227 | 5 | 6 | 498 | 20 | 503 | 2.95e-173 | 498 |
| Msa0125850 | MtrunA17_Chr2g0277841 | 51.707 | 410 | 195 | 3 | 99 | 507 | 45 | 452 | 2.81e-152 | 442 |
| Msa0125850 | MtrunA17_Chr2g0295781 | 50.235 | 426 | 201 | 5 | 87 | 506 | 31 | 451 | 4.52e-152 | 442 |
| Msa0125850 | MtrunA17_Chr7g0276241 | 66.552 | 290 | 90 | 2 | 218 | 505 | 1 | 285 | 7.73e-146 | 420 |
| Msa0125850 | MtrunA17_Chr1g0204301 | 44.608 | 408 | 225 | 1 | 98 | 504 | 77 | 484 | 3.40e-129 | 385 |
| Msa0125850 | MtrunA17_Chr6g0461631 | 66.275 | 255 | 86 | 0 | 253 | 507 | 3 | 257 | 4.55e-126 | 369 |
| Msa0125850 | MtrunA17_Chr3g0115021 | 44.444 | 414 | 222 | 3 | 95 | 504 | 74 | 483 | 1.33e-122 | 368 |
| Msa0125850 | MtrunA17_Chr3g0115041 | 44.444 | 414 | 222 | 3 | 95 | 504 | 74 | 483 | 1.33e-122 | 368 |
| Msa0125850 | MtrunA17_Chr6g0469631 | 44.335 | 406 | 218 | 3 | 103 | 504 | 81 | 482 | 4.82e-116 | 351 |
| Msa0125850 | MtrunA17_Chr4g0026871 | 70.485 | 227 | 66 | 1 | 281 | 506 | 1 | 227 | 1.31e-114 | 338 |
| Msa0125850 | MtrunA17_Chr4g0030591 | 40.995 | 422 | 226 | 4 | 99 | 503 | 27 | 442 | 5.05e-110 | 335 |
| Msa0125850 | MtrunA17_Chr4g0030601 | 41.232 | 422 | 239 | 4 | 88 | 503 | 15 | 433 | 6.37e-110 | 335 |
| Msa0125850 | MtrunA17_Chr2g0327721 | 41.096 | 438 | 232 | 8 | 88 | 505 | 15 | 446 | 2.31e-108 | 331 |
| Msa0125850 | MtrunA17_Chr4g0030581 | 41.204 | 432 | 233 | 6 | 88 | 503 | 15 | 441 | 2.09e-107 | 328 |
| Msa0125850 | MtrunA17_Chr1g0212951 | 38.391 | 435 | 243 | 4 | 91 | 503 | 20 | 451 | 3.45e-107 | 328 |
| Msa0125850 | MtrunA17_Chr4g0026791 | 64.804 | 179 | 62 | 1 | 281 | 458 | 1 | 179 | 6.77e-79 | 244 |
| Msa0125850 | MtrunA17_Chr4g0026721 | 68.553 | 159 | 50 | 0 | 348 | 506 | 1 | 159 | 5.70e-76 | 236 |
| Msa0125850 | MtrunA17_Chr7g0250651 | 60.106 | 188 | 74 | 1 | 7 | 193 | 6 | 193 | 1.67e-74 | 234 |
| Msa0125850 | MtrunA17_Chr6g0461621 | 49.785 | 233 | 111 | 3 | 34 | 265 | 2 | 229 | 1.09e-67 | 217 |
| Msa0125850 | MtrunA17_Chr4g0026861 | 55.556 | 180 | 80 | 0 | 77 | 256 | 36 | 215 | 1.95e-67 | 216 |
| Msa0125850 | MtrunA17_Chr4g0026801 | 49.593 | 123 | 62 | 0 | 77 | 199 | 36 | 158 | 4.90e-36 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125850 | AT1G04220.1 | 75.479 | 522 | 115 | 6 | 3 | 516 | 9 | 525 | 0.0 | 825 |
| Msa0125850 | AT2G26640.1 | 76.768 | 495 | 115 | 0 | 18 | 512 | 15 | 509 | 0.0 | 822 |
| Msa0125850 | AT5G43760.1 | 77.016 | 496 | 108 | 3 | 26 | 515 | 34 | 529 | 0.0 | 776 |
| Msa0125850 | AT1G19440.1 | 66.531 | 490 | 163 | 1 | 15 | 504 | 24 | 512 | 0.0 | 692 |
| Msa0125850 | AT2G16280.1 | 64.898 | 490 | 171 | 1 | 15 | 504 | 20 | 508 | 0.0 | 684 |
| Msa0125850 | AT1G01120.1 | 62.903 | 496 | 178 | 3 | 17 | 506 | 31 | 526 | 0.0 | 678 |
| Msa0125850 | AT4G34510.1 | 63.103 | 477 | 169 | 4 | 31 | 506 | 15 | 485 | 0.0 | 637 |
| Msa0125850 | AT1G68530.1 | 59.838 | 493 | 197 | 1 | 20 | 512 | 6 | 497 | 0.0 | 630 |
| Msa0125850 | AT1G25450.1 | 59.229 | 493 | 200 | 1 | 20 | 512 | 1 | 492 | 0.0 | 618 |
| Msa0125850 | AT2G26250.1 | 56.923 | 520 | 193 | 5 | 13 | 504 | 32 | 548 | 0.0 | 602 |
| Msa0125850 | AT4G34250.1 | 57.025 | 484 | 201 | 3 | 29 | 506 | 5 | 487 | 0.0 | 559 |
| Msa0125850 | AT2G15090.1 | 57.447 | 470 | 190 | 4 | 46 | 506 | 11 | 479 | 0.0 | 550 |
| Msa0125850 | AT4G34520.1 | 56.379 | 486 | 200 | 4 | 32 | 506 | 6 | 490 | 0.0 | 547 |
| Msa0125850 | AT2G46720.1 | 56.757 | 444 | 187 | 3 | 66 | 506 | 24 | 465 | 0.0 | 547 |
| Msa0125850 | AT3G10280.1 | 56.941 | 425 | 168 | 4 | 89 | 506 | 42 | 458 | 0.0 | 525 |
| Msa0125850 | AT1G71160.1 | 48.578 | 422 | 211 | 4 | 84 | 504 | 30 | 446 | 7.75e-150 | 437 |
| Msa0125850 | AT5G49070.1 | 47.196 | 428 | 222 | 3 | 87 | 512 | 36 | 461 | 2.91e-141 | 415 |
| Msa0125850 | AT1G68530.2 | 56.522 | 345 | 148 | 2 | 20 | 363 | 6 | 349 | 1.39e-139 | 407 |
| Msa0125850 | AT3G52160.1 | 43.061 | 490 | 229 | 6 | 6 | 495 | 10 | 449 | 7.02e-139 | 409 |
| Msa0125850 | AT3G52160.2 | 49.041 | 365 | 155 | 2 | 131 | 495 | 3 | 336 | 6.91e-128 | 376 |
| Msa0125850 | AT2G28630.2 | 41.647 | 425 | 219 | 7 | 101 | 503 | 29 | 446 | 1.66e-111 | 339 |
| Msa0125850 | AT2G28630.1 | 41.647 | 425 | 219 | 7 | 101 | 503 | 29 | 446 | 1.66e-111 | 339 |
| Msa0125850 | AT1G07720.1 | 41.026 | 429 | 221 | 6 | 99 | 503 | 27 | 447 | 3.20e-108 | 331 |
| Msa0125850 | AT1G07720.2 | 41.026 | 429 | 221 | 6 | 99 | 503 | 70 | 490 | 4.36e-108 | 332 |
| Msa0125850 | AT5G04530.1 | 38.915 | 424 | 247 | 5 | 89 | 503 | 17 | 437 | 1.54e-106 | 326 |
| Msa0125850 | AT5G49070.2 | 42.294 | 279 | 160 | 1 | 87 | 365 | 36 | 313 | 5.74e-77 | 245 |
Find 111 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACACTCAACTGGTATTT+TGG | 0.148092 | 1_3:-54625720 | Msa0125850:CDS |
| GGCTAAGGATATTGGGATTT+TGG | 0.160476 | 1_3:-54626483 | Msa0125850:CDS |
| GTTAGGAAGAAATTTGTTTA+AGG | 0.174752 | 1_3:-54624978 | Msa0125850:exon |
| TTCACTGATAGAAGAAAATT+TGG | 0.183181 | 1_3:+54627007 | None:intergenic |
| ATTTCTTCTCATCTTCTTCT+TGG | 0.218715 | 1_3:+54625535 | None:intergenic |
| TAACTCTTGGAAAATTTATA+AGG | 0.234565 | 1_3:+54627111 | None:intergenic |
| GTACATGTGTATTCTTGTTT+TGG | 0.247208 | 1_3:+54626731 | None:intergenic |
| TCCACATTTAATTAATCTTT+AGG | 0.260306 | 1_3:-54624943 | Msa0125850:three_prime_UTR |
| TGCTGGTGGAAGAGCTGTTT+TGG | 0.263824 | 1_3:-54625307 | Msa0125850:CDS |
| CTATTCAGTGTCATTCTTGA+TGG | 0.275990 | 1_3:+54625240 | None:intergenic |
| GGAAGATGGCATTGTTATAA+AGG | 0.290049 | 1_3:+54627304 | None:intergenic |
| TTTGCTGTCAGAAGCTTTGT+TGG | 0.296454 | 1_3:+54625632 | None:intergenic |
| GTGAATCATTATAAGTTAAG+AGG | 0.297927 | 1_3:-54626410 | Msa0125850:CDS |
| TGGCAAATTGCATTTGGTTC+TGG | 0.298723 | 1_3:-54625132 | Msa0125850:CDS |
| ATCAAATTGTTTGTTTAGAA+TGG | 0.305639 | 1_3:-54625676 | Msa0125850:CDS |
| ATCACTCTCAAAAGATTTAA+TGG | 0.313780 | 1_3:-54625502 | Msa0125850:CDS |
| TGGTGCTATTGATGAGCTTT+TGG | 0.331199 | 1_3:-54626522 | Msa0125850:CDS |
| ACACTTCTAGTAGTTCATTA+TGG | 0.333772 | 1_3:-54625209 | Msa0125850:CDS |
| GTATAACATATGATATGTTT+TGG | 0.336428 | 1_3:+54627224 | None:intergenic |
| ATGAATAGGTCTGAATTAAC+AGG | 0.348386 | 1_3:-54626695 | Msa0125850:CDS |
| TCCAAACTCTTATGCCTTAG+TGG | 0.348892 | 1_3:-54625757 | Msa0125850:CDS |
| GAACCAATGGTTGCCACTTT+AGG | 0.351358 | 1_3:+54625006 | None:intergenic |
| GCTTCAGCCATACAAGGATT+TGG | 0.353700 | 1_3:+54626572 | None:intergenic |
| GTGTTAAGGCTAAGGATATT+GGG | 0.356405 | 1_3:-54626490 | Msa0125850:CDS |
| AAAATTTATAAGGACTTGTT+TGG | 0.362540 | 1_3:+54627121 | None:intergenic |
| GGTGTTAAGGCTAAGGATAT+TGG | 0.367782 | 1_3:-54626491 | Msa0125850:CDS |
| AACACTATGTACTAGTCTTA+TGG | 0.372563 | 1_3:-54626825 | Msa0125850:CDS |
| ATACTTGAGAGGTCTGGTTT+AGG | 0.382514 | 1_3:-54626635 | Msa0125850:CDS |
| AAGTTATAATCTTGGTGGTA+TGG | 0.383403 | 1_3:-54626378 | Msa0125850:CDS |
| ACCACTAAGGCATAAGAGTT+TGG | 0.387819 | 1_3:+54625756 | None:intergenic |
| AGGACTTGGCAAATTGCATT+TGG | 0.392984 | 1_3:-54625138 | Msa0125850:CDS |
| AGAATGACACTGAATAGATT+TGG | 0.394432 | 1_3:-54625234 | Msa0125850:CDS |
| GAAGATGAGAAGAAATCAAT+TGG | 0.399460 | 1_3:-54625528 | Msa0125850:CDS |
| GTGATTCAAAAGAAACTGAT+TGG | 0.399645 | 1_3:+54627050 | None:intergenic |
| GGTGGAACACTCAATATTGC+TGG | 0.400152 | 1_3:+54626593 | None:intergenic |
| AATGTTCAAAGTTATAATCT+TGG | 0.402519 | 1_3:-54626386 | Msa0125850:CDS |
| TCATGTAACAAATGTTCAAC+TGG | 0.405616 | 1_3:+54624814 | None:intergenic |
| TAGTTCATTATGGTATGAAT+TGG | 0.409549 | 1_3:-54625199 | Msa0125850:CDS |
| TCAAATTGTTTGTTTAGAAT+GGG | 0.411142 | 1_3:-54625675 | Msa0125850:CDS |
| AGTTTAAAATCAGGAATGTA+AGG | 0.413619 | 1_3:+54625354 | None:intergenic |
| GCCACTTTAGGCACATGAAC+AGG | 0.414943 | 1_3:+54625018 | None:intergenic |
| CACACCGTCCGAACACATAA+AGG | 0.416666 | 1_3:-54625588 | Msa0125850:CDS |
| AAATTGAAGTAATTAACTCT+TGG | 0.422322 | 1_3:+54627098 | None:intergenic |
| TGATCTTAGTGATTGGCATA+TGG | 0.423434 | 1_3:-54625265 | Msa0125850:CDS |
| GGTGGTATGGGTTGTAGTGC+TGG | 0.424592 | 1_3:-54626365 | Msa0125850:CDS |
| AAAATCTTGATCTTAGTGAT+TGG | 0.430588 | 1_3:-54625272 | Msa0125850:CDS |
| CATATAGTTGAACAATATCA+TGG | 0.436793 | 1_3:+54626876 | None:intergenic |
| AACCATTGGTTCATCAAGTT+AGG | 0.443186 | 1_3:-54624995 | Msa0125850:exon |
| TTTGGAGAAAACTGGTGTTA+AGG | 0.445941 | 1_3:-54626504 | Msa0125850:CDS |
| TCAAAAGCTAGTTTAAAATC+AGG | 0.452427 | 1_3:+54625345 | None:intergenic |
| GAAGCTGAGGAAGTTATGTT+TGG | 0.456300 | 1_3:-54626542 | Msa0125850:CDS |
| TACTTCAATTTCAATACTCA+TGG | 0.459172 | 1_3:-54627086 | Msa0125850:exon |
| TTCCTTGCTTCAGCCATACA+AGG | 0.461441 | 1_3:+54626566 | None:intergenic |
| GGAGGATTAGAAAAGGTGAT+AGG | 0.461538 | 1_3:-54625158 | Msa0125850:CDS |
| AGTTATAATCTTGGTGGTAT+GGG | 0.463605 | 1_3:-54626377 | Msa0125850:CDS |
| AAGAAAATACTTGAGAGGTC+TGG | 0.464675 | 1_3:-54626641 | Msa0125850:CDS |
| CGTCCGCGCCTTTATGTGTT+CGG | 0.465432 | 1_3:+54625580 | None:intergenic |
| TCAACCAAGTAAACACCTCT+TGG | 0.467981 | 1_3:+54626770 | None:intergenic |
| CCTTGCTAAGCAGCTCCTAC+AGG | 0.473334 | 1_3:-54626327 | Msa0125850:intron |
| TCCTGTTCATGTGCCTAAAG+TGG | 0.481276 | 1_3:-54625019 | Msa0125850:CDS |
| TGGAGAACATCACACTCAAC+TGG | 0.498098 | 1_3:-54625728 | Msa0125850:CDS |
| GTGGAACACTCAATATTGCT+GGG | 0.499640 | 1_3:+54626594 | None:intergenic |
| TCTGACATAGGTAGGACTAA+TGG | 0.501024 | 1_3:+54625435 | None:intergenic |
| TTCCTAACTTGATGAACCAA+TGG | 0.503576 | 1_3:+54624993 | None:intergenic |
| TCGTCCAAGAGGTGTTTACT+TGG | 0.505159 | 1_3:-54626774 | Msa0125850:CDS |
| TGAATCATTATAAGTTAAGA+GGG | 0.506304 | 1_3:-54626409 | Msa0125850:CDS |
| TCCTAAAGATTAATTAAATG+TGG | 0.506314 | 1_3:+54624942 | None:intergenic |
| TTCTCAAGTGCTTGTGCTAG+AGG | 0.515357 | 1_3:+54627198 | None:intergenic |
| GTTCAAAGTTATAATCTTGG+TGG | 0.515718 | 1_3:-54626383 | Msa0125850:CDS |
| TGGCTTATACTGAAGCTAAA+GGG | 0.515795 | 1_3:-54625179 | Msa0125850:CDS |
| TTAGAAAAGGTGATAGGACT+TGG | 0.517295 | 1_3:-54625152 | Msa0125850:CDS |
| TCTCAAGTGCTTGTGCTAGA+GGG | 0.519090 | 1_3:+54627199 | None:intergenic |
| AAACTTAAATATGTGAAACT+TGG | 0.519226 | 1_3:-54626986 | Msa0125850:CDS |
| GAAAGTTGCTTGTCTAGTTG+AGG | 0.519493 | 1_3:-54624720 | Msa0125850:three_prime_UTR |
| CGCGCCTTTATGTGTTCGGA+CGG | 0.519941 | 1_3:+54625584 | None:intergenic |
| AAAGATTTAATGGCGGTCGC+CGG | 0.521478 | 1_3:-54625492 | Msa0125850:CDS |
| GAAAACTGGTGTTAAGGCTA+AGG | 0.522687 | 1_3:-54626498 | Msa0125850:CDS |
| TTGGCTTATACTGAAGCTAA+AGG | 0.523513 | 1_3:-54625180 | Msa0125850:CDS |
| TGTTCCACCAAATCCTTGTA+TGG | 0.528304 | 1_3:-54626579 | Msa0125850:CDS |
| GTTCTCCATGCTCACCACTA+AGG | 0.531929 | 1_3:+54625743 | None:intergenic |
| TGGACCAAGTGTTGTGATGT+TGG | 0.537554 | 1_3:+54625455 | None:intergenic |
| TTCAAAAGAAAATACTTGAG+AGG | 0.537603 | 1_3:-54626646 | Msa0125850:CDS |
| TGTCAGAAGCTTTGTTGGAG+AGG | 0.549538 | 1_3:+54625637 | None:intergenic |
| TTTCTCCTTAGCTGGATCAA+CGG | 0.549864 | 1_3:+54625071 | None:intergenic |
| GTGCCTAAAGTGGCAACCAT+TGG | 0.552723 | 1_3:-54625009 | Msa0125850:CDS |
| GCTAAAGGGAGGATTAGAAA+AGG | 0.553131 | 1_3:-54625165 | Msa0125850:CDS |
| AATTGTTTGTTTAGAATGGG+AGG | 0.568502 | 1_3:-54625672 | Msa0125850:CDS |
| TCAGCCATACAAGGATTTGG+TGG | 0.568816 | 1_3:+54626575 | None:intergenic |
| TCATGAATCTCATCCATCCA+TGG | 0.570459 | 1_3:+54625045 | None:intergenic |
| AAAACCAACATCACAACACT+TGG | 0.570838 | 1_3:-54625459 | Msa0125850:CDS |
| AACAGAAGCTGTTCTGACAT+AGG | 0.577420 | 1_3:+54625423 | None:intergenic |
| TTCGGACGGTGTGGATCAGT+TGG | 0.577447 | 1_3:+54625598 | None:intergenic |
| GGCGCGGACGACAGATCATA+CGG | 0.585092 | 1_3:-54625567 | Msa0125850:CDS |
| GAAACAAAATCAAATGAGAG+TGG | 0.588416 | 1_3:+54627160 | None:intergenic |
| GAAGCTGTTCTGACATAGGT+AGG | 0.592086 | 1_3:+54625427 | None:intergenic |
| ATCCTTGTATGGCTGAAGCA+AGG | 0.595750 | 1_3:-54626568 | Msa0125850:CDS |
| GTGCTGTGTGGCGTGCATTG+AGG | 0.597254 | 1_3:-54625095 | Msa0125850:CDS |
| GAGGACCGTTGATCCAGCTA+AGG | 0.607671 | 1_3:-54625076 | Msa0125850:CDS |
| TTATGCCTTAGTGGTGAGCA+TGG | 0.609284 | 1_3:-54625748 | Msa0125850:CDS |
| ATAGCAGAAAGAGAAGGTGT+AGG | 0.612815 | 1_3:+54626437 | None:intergenic |
| CCTGTAGGAGCTGCTTAGCA+AGG | 0.618159 | 1_3:+54626327 | None:intergenic |
| TGAAGCAAGGAAAGAAGCTG+AGG | 0.624018 | 1_3:-54626555 | Msa0125850:CDS |
| CTTTATGTGTTCGGACGGTG+TGG | 0.639949 | 1_3:+54625589 | None:intergenic |
| TGGAACACTCAATATTGCTG+GGG | 0.643916 | 1_3:+54626595 | None:intergenic |
| ACAATCATAGCAGAAAGAGA+AGG | 0.652463 | 1_3:+54626431 | None:intergenic |
| TACTTCATGAGTCGTCCAAG+AGG | 0.658967 | 1_3:-54626785 | Msa0125850:CDS |
| CTTATACTGAAGCTAAAGGG+AGG | 0.665669 | 1_3:-54625176 | Msa0125850:CDS |
| GGAACACTCAATATTGCTGG+GGG | 0.681776 | 1_3:+54626596 | None:intergenic |
| CGTCCGAACACATAAAGGCG+CGG | 0.707110 | 1_3:-54625583 | Msa0125850:CDS |
| ACTCTCAAAAGATTTAATGG+CGG | 0.725346 | 1_3:-54625499 | Msa0125850:CDS |
| TTAAATGTAACAGTGCTGTG+TGG | 0.778579 | 1_3:-54625107 | Msa0125850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATACTATTGTTTAATTTCA+TGG | - | chr1_3:54625735-54625754 | Msa0125850:CDS | 15.0% |
| !! | TAATTTCAATGATTTATTCA+TGG | + | chr1_3:54626132-54626151 | None:intergenic | 15.0% |
| !!! | AACATTTTTGTTATATGTAT+AGG | - | chr1_3:54626233-54626252 | Msa0125850:intron | 15.0% |
| !! | TTGAATGTGATGAAAAAATA+TGG | + | chr1_3:54624737-54624756 | None:intergenic | 20.0% |
| !!! | GTATAACATATGATATGTTT+TGG | + | chr1_3:54624796-54624815 | None:intergenic | 20.0% |
| !!! | AAAATTTATAAGGACTTGTT+TGG | + | chr1_3:54624899-54624918 | None:intergenic | 20.0% |
| !! | TAACTCTTGGAAAATTTATA+AGG | + | chr1_3:54624909-54624928 | None:intergenic | 20.0% |
| !! | AAATTGAAGTAATTAACTCT+TGG | + | chr1_3:54624922-54624941 | None:intergenic | 20.0% |
| !! | AAACTTAAATATGTGAAACT+TGG | - | chr1_3:54625031-54625050 | Msa0125850:CDS | 20.0% |
| !!! | TACATTTTCTGATGAAAATT+TGG | - | chr1_3:54625345-54625364 | Msa0125850:CDS | 20.0% |
| !! | TGAATCATTATAAGTTAAGA+GGG | - | chr1_3:54625608-54625627 | Msa0125850:CDS | 20.0% |
| !! | AATGTTCAAAGTTATAATCT+TGG | - | chr1_3:54625631-54625650 | Msa0125850:CDS | 20.0% |
| !!! | TTCAAATTATAGCTTTAAGT+TGG | - | chr1_3:54625809-54625828 | Msa0125850:intron | 20.0% |
| !! | TAGTTGTAATTGTAAAGATT+TGG | + | chr1_3:54626104-54626123 | None:intergenic | 20.0% |
| !! | AATCTTTACAATTACAACTA+AGG | - | chr1_3:54626104-54626123 | Msa0125850:intron | 20.0% |
| !! | ATCTTTACAATTACAACTAA+GGG | - | chr1_3:54626105-54626124 | Msa0125850:intron | 20.0% |
| !!! | CTATAATAACATGGTATTTT+TGG | + | chr1_3:54626198-54626217 | None:intergenic | 20.0% |
| !!! | ATTGTTTTGCTATAATAACA+TGG | + | chr1_3:54626207-54626226 | None:intergenic | 20.0% |
| !! | ATCAAATTGTTTGTTTAGAA+TGG | - | chr1_3:54626341-54626360 | Msa0125850:CDS | 20.0% |
| !!! | TCAAATTGTTTGTTTAGAAT+GGG | - | chr1_3:54626342-54626361 | Msa0125850:CDS | 20.0% |
| !! | TCCACATTTAATTAATCTTT+AGG | - | chr1_3:54627074-54627093 | Msa0125850:exon | 20.0% |
| !! | TCCTAAAGATTAATTAAATG+TGG | + | chr1_3:54627078-54627097 | None:intergenic | 20.0% |
| ! | TGATGAAAAAATATGGAAGA+TGG | + | chr1_3:54624730-54624749 | None:intergenic | 25.0% |
| !!! | CATTCAATTCCTTCTTTTTT+TGG | - | chr1_3:54624750-54624769 | Msa0125850:three_prime_UTR | 25.0% |
| ! | AAATGTAGACCAAAAAAAGA+AGG | + | chr1_3:54624762-54624781 | None:intergenic | 25.0% |
| ! | TACTTCAATTTCAATACTCA+TGG | - | chr1_3:54624931-54624950 | Msa0125850:three_prime_UTR | 25.0% |
| ! | TTCACTGATAGAAGAAAATT+TGG | + | chr1_3:54625013-54625032 | None:intergenic | 25.0% |
| !!! | TAGCTTTTGAGATTAAGTAA+TGG | + | chr1_3:54625060-54625079 | None:intergenic | 25.0% |
| ! | CATATAGTTGAACAATATCA+TGG | + | chr1_3:54625144-54625163 | None:intergenic | 25.0% |
| !! | CTAGAGAAATTTTCATGAAT+AGG | - | chr1_3:54625308-54625327 | Msa0125850:CDS | 25.0% |
| ! | TTCAAAAGAAAATACTTGAG+AGG | - | chr1_3:54625371-54625390 | Msa0125850:CDS | 25.0% |
| ! | GTGAATCATTATAAGTTAAG+AGG | - | chr1_3:54625607-54625626 | Msa0125850:CDS | 25.0% |
| !!! | GTTTAATTTCATGGTCATTT+TGG | - | chr1_3:54625744-54625763 | Msa0125850:CDS | 25.0% |
| !! | AATCGTAGAGACAAAATTTT+AGG | - | chr1_3:54625779-54625798 | Msa0125850:intron | 25.0% |
| !! | ATCGTAGAGACAAAATTTTA+GGG | - | chr1_3:54625780-54625799 | Msa0125850:intron | 25.0% |
| ! | ACCAAAAGTAAATTAAGTAC+TGG | - | chr1_3:54625920-54625939 | Msa0125850:intron | 25.0% |
| !! | ACCAGTACTTAATTTACTTT+TGG | + | chr1_3:54625924-54625943 | None:intergenic | 25.0% |
| !! | TTATTGACTATAGTTTGGTT+GGG | + | chr1_3:54626070-54626089 | None:intergenic | 25.0% |
| !! | ATTATTGACTATAGTTTGGT+TGG | + | chr1_3:54626071-54626090 | None:intergenic | 25.0% |
| !! | TGGTATTATTGACTATAGTT+TGG | + | chr1_3:54626075-54626094 | None:intergenic | 25.0% |
| ! | TTGTAAAGATTTGGACAATT+TGG | + | chr1_3:54626095-54626114 | None:intergenic | 25.0% |
| ! | ATCACTCTCAAAAGATTTAA+TGG | - | chr1_3:54626515-54626534 | Msa0125850:CDS | 25.0% |
| !! | AGTTTAAAATCAGGAATGTA+AGG | + | chr1_3:54626666-54626685 | None:intergenic | 25.0% |
| !! | TCAAAAGCTAGTTTAAAATC+AGG | + | chr1_3:54626675-54626694 | None:intergenic | 25.0% |
| ! | AAAATCTTGATCTTAGTGAT+TGG | - | chr1_3:54626745-54626764 | Msa0125850:CDS | 25.0% |
| ! | TAGTTCATTATGGTATGAAT+TGG | - | chr1_3:54626818-54626837 | Msa0125850:CDS | 25.0% |
| !! | GTTAGGAAGAAATTTGTTTA+AGG | - | chr1_3:54627039-54627058 | Msa0125850:CDS | 25.0% |
| !! | TCATAGTACACATTTTATGA+AGG | + | chr1_3:54627244-54627263 | None:intergenic | 25.0% |
| GAAACAAAATCAAATGAGAG+TGG | + | chr1_3:54624860-54624879 | None:intergenic | 30.0% | |
| GTGATTCAAAAGAAACTGAT+TGG | + | chr1_3:54624970-54624989 | None:intergenic | 30.0% | |
| CAAAAAGTGGTATGAGTAAA+AGG | + | chr1_3:54625087-54625106 | None:intergenic | 30.0% | |
| !! | CTTTTACTCATACCACTTTT+TGG | - | chr1_3:54625085-54625104 | Msa0125850:CDS | 30.0% |
| !! | AACACTATGTACTAGTCTTA+TGG | - | chr1_3:54625192-54625211 | Msa0125850:CDS | 30.0% |
| !! | GTACATGTGTATTCTTGTTT+TGG | + | chr1_3:54625289-54625308 | None:intergenic | 30.0% |
| ATGAATAGGTCTGAATTAAC+AGG | - | chr1_3:54625322-54625341 | Msa0125850:CDS | 30.0% | |
| GTTCAAAGTTATAATCTTGG+TGG | - | chr1_3:54625634-54625653 | Msa0125850:CDS | 30.0% | |
| ! | AAGTTATAATCTTGGTGGTA+TGG | - | chr1_3:54625639-54625658 | Msa0125850:CDS | 30.0% |
| ! | AGTTATAATCTTGGTGGTAT+GGG | - | chr1_3:54625640-54625659 | Msa0125850:CDS | 30.0% |
| ! | TCGTAGAGACAAAATTTTAG+GGG | - | chr1_3:54625781-54625800 | Msa0125850:intron | 30.0% |
| TGTTATAACTGCAAGTAACA+TGG | + | chr1_3:54626015-54626034 | None:intergenic | 30.0% | |
| ! | TATTGACTATAGTTTGGTTG+GGG | + | chr1_3:54626069-54626088 | None:intergenic | 30.0% |
| ! | AATTGTTTGTTTAGAATGGG+AGG | - | chr1_3:54626345-54626364 | Msa0125850:CDS | 30.0% |
| ATTTCTTCTCATCTTCTTCT+TGG | + | chr1_3:54626485-54626504 | None:intergenic | 30.0% | |
| GAAGATGAGAAGAAATCAAT+TGG | - | chr1_3:54626489-54626508 | Msa0125850:CDS | 30.0% | |
| ACTCTCAAAAGATTTAATGG+CGG | - | chr1_3:54626518-54626537 | Msa0125850:CDS | 30.0% | |
| AGAATGACACTGAATAGATT+TGG | - | chr1_3:54626783-54626802 | Msa0125850:CDS | 30.0% | |
| ACACTTCTAGTAGTTCATTA+TGG | - | chr1_3:54626808-54626827 | Msa0125850:CDS | 30.0% | |
| TCATGTAACAAATGTTCAAC+TGG | + | chr1_3:54627206-54627225 | None:intergenic | 30.0% | |
| GGAAGATGGCATTGTTATAA+AGG | + | chr1_3:54624716-54624735 | None:intergenic | 35.0% | |
| ! | GGAAGTTTTCTTCTTTCTTG+AGG | + | chr1_3:54624992-54625011 | None:intergenic | 35.0% |
| AAGAAAATACTTGAGAGGTC+TGG | - | chr1_3:54625376-54625395 | Msa0125850:CDS | 35.0% | |
| ! | TTTGGAGAAAACTGGTGTTA+AGG | - | chr1_3:54625513-54625532 | Msa0125850:CDS | 35.0% |
| GTGTTAAGGCTAAGGATATT+GGG | - | chr1_3:54625527-54625546 | Msa0125850:CDS | 35.0% | |
| ACAATCATAGCAGAAAGAGA+AGG | + | chr1_3:54625589-54625608 | None:intergenic | 35.0% | |
| AAGAATGCAAACTAACCTGT+AGG | + | chr1_3:54625708-54625727 | None:intergenic | 35.0% | |
| TTGGGGCAGTGTATTAAATA+GGG | + | chr1_3:54626052-54626071 | None:intergenic | 35.0% | |
| ! | ATCACACTCAACTGGTATTT+TGG | - | chr1_3:54626297-54626316 | Msa0125850:intron | 35.0% |
| AAAACCAACATCACAACACT+TGG | - | chr1_3:54626558-54626577 | Msa0125850:CDS | 35.0% | |
| ! | GAGCATTTTTGTATTCATGC+TGG | - | chr1_3:54626693-54626712 | Msa0125850:CDS | 35.0% |
| ! | CATTTTTGTATTCATGCTGG+TGG | - | chr1_3:54626696-54626715 | Msa0125850:CDS | 35.0% |
| TGATCTTAGTGATTGGCATA+TGG | - | chr1_3:54626752-54626771 | Msa0125850:CDS | 35.0% | |
| ! | CTATTCAGTGTCATTCTTGA+TGG | + | chr1_3:54626780-54626799 | None:intergenic | 35.0% |
| TTGGCTTATACTGAAGCTAA+AGG | - | chr1_3:54626837-54626856 | Msa0125850:CDS | 35.0% | |
| TGGCTTATACTGAAGCTAAA+GGG | - | chr1_3:54626838-54626857 | Msa0125850:CDS | 35.0% | |
| TTAGAAAAGGTGATAGGACT+TGG | - | chr1_3:54626865-54626884 | Msa0125850:CDS | 35.0% | |
| TTAAATGTAACAGTGCTGTG+TGG | - | chr1_3:54626910-54626929 | Msa0125850:CDS | 35.0% | |
| TAAGGAGAAAAATCCATGGA+TGG | - | chr1_3:54626959-54626978 | Msa0125850:CDS | 35.0% | |
| !! | AACCATTGGTTCATCAAGTT+AGG | - | chr1_3:54627022-54627041 | Msa0125850:CDS | 35.0% |
| TTCCTAACTTGATGAACCAA+TGG | + | chr1_3:54627027-54627046 | None:intergenic | 35.0% | |
| TCAACCAAGTAAACACCTCT+TGG | + | chr1_3:54625250-54625269 | None:intergenic | 40.0% | |
| ! | ATACTTGAGAGGTCTGGTTT+AGG | - | chr1_3:54625382-54625401 | Msa0125850:CDS | 40.0% |
| TGGAACACTCAATATTGCTG+GGG | + | chr1_3:54625425-54625444 | None:intergenic | 40.0% | |
| GTGGAACACTCAATATTGCT+GGG | + | chr1_3:54625426-54625445 | None:intergenic | 40.0% | |
| TGTTCCACCAAATCCTTGTA+TGG | - | chr1_3:54625438-54625457 | Msa0125850:CDS | 40.0% | |
| GAAGCTGAGGAAGTTATGTT+TGG | - | chr1_3:54625475-54625494 | Msa0125850:CDS | 40.0% | |
| !!! | TGGTGCTATTGATGAGCTTT+TGG | - | chr1_3:54625495-54625514 | Msa0125850:CDS | 40.0% |
| !! | GATGAGCTTTTGGAGAAAAC+TGG | - | chr1_3:54625505-54625524 | Msa0125850:CDS | 40.0% |
| ! | GAAAACTGGTGTTAAGGCTA+AGG | - | chr1_3:54625519-54625538 | Msa0125850:CDS | 40.0% |
| GGTGTTAAGGCTAAGGATAT+TGG | - | chr1_3:54625526-54625545 | Msa0125850:CDS | 40.0% | |
| ! | GGCTAAGGATATTGGGATTT+TGG | - | chr1_3:54625534-54625553 | Msa0125850:CDS | 40.0% |
| ! | ATAGCAGAAAGAGAAGGTGT+AGG | + | chr1_3:54625583-54625602 | None:intergenic | 40.0% |
| GCTTCAAGAAACTTCTCTCA+TGG | + | chr1_3:54625947-54625966 | None:intergenic | 40.0% | |
| AATCTGTACATGTGTGTGTG+TGG | + | chr1_3:54625990-54626009 | None:intergenic | 40.0% | |
| GTTGGGGCAGTGTATTAAAT+AGG | + | chr1_3:54626053-54626072 | None:intergenic | 40.0% | |
| TCCAAACTCTTATGCCTTAG+TGG | - | chr1_3:54626260-54626279 | Msa0125850:intron | 40.0% | |
| ACCACTAAGGCATAAGAGTT+TGG | + | chr1_3:54626264-54626283 | None:intergenic | 40.0% | |
| ! | TTTGCTGTCAGAAGCTTTGT+TGG | + | chr1_3:54626388-54626407 | None:intergenic | 40.0% |
| TCTGACATAGGTAGGACTAA+TGG | + | chr1_3:54626585-54626604 | None:intergenic | 40.0% | |
| AACAGAAGCTGTTCTGACAT+AGG | + | chr1_3:54626597-54626616 | None:intergenic | 40.0% | |
| !! | GCTTCTGTTTTTCGCAACTT+TGG | - | chr1_3:54626608-54626627 | Msa0125850:CDS | 40.0% |
| CTTATACTGAAGCTAAAGGG+AGG | - | chr1_3:54626841-54626860 | Msa0125850:CDS | 40.0% | |
| GCTAAAGGGAGGATTAGAAA+AGG | - | chr1_3:54626852-54626871 | Msa0125850:CDS | 40.0% | |
| GGAGGATTAGAAAAGGTGAT+AGG | - | chr1_3:54626859-54626878 | Msa0125850:CDS | 40.0% | |
| AGGACTTGGCAAATTGCATT+TGG | - | chr1_3:54626879-54626898 | Msa0125850:CDS | 40.0% | |
| ! | TGGCAAATTGCATTTGGTTC+TGG | - | chr1_3:54626885-54626904 | Msa0125850:CDS | 40.0% |
| TTTCTCCTTAGCTGGATCAA+CGG | + | chr1_3:54626949-54626968 | None:intergenic | 40.0% | |
| ! | CATGGATTTTTCTCCTTAGC+TGG | + | chr1_3:54626957-54626976 | None:intergenic | 40.0% |
| CAGCTAAGGAGAAAAATCCA+TGG | - | chr1_3:54626955-54626974 | Msa0125850:CDS | 40.0% | |
| TCATGAATCTCATCCATCCA+TGG | + | chr1_3:54626975-54626994 | None:intergenic | 40.0% | |
| GAAAGTTGCTTGTCTAGTTG+AGG | - | chr1_3:54627297-54627316 | Msa0125850:five_prime_UTR | 40.0% | |
| TCTCAAGTGCTTGTGCTAGA+GGG | + | chr1_3:54624821-54624840 | None:intergenic | 45.0% | |
| TTCTCAAGTGCTTGTGCTAG+AGG | + | chr1_3:54624822-54624841 | None:intergenic | 45.0% | |
| TACTTCATGAGTCGTCCAAG+AGG | - | chr1_3:54625232-54625251 | Msa0125850:CDS | 45.0% | |
| !! | TCGTCCAAGAGGTGTTTACT+TGG | - | chr1_3:54625243-54625262 | Msa0125850:CDS | 45.0% |
| GGAACACTCAATATTGCTGG+GGG | + | chr1_3:54625424-54625443 | None:intergenic | 45.0% | |
| GGTGGAACACTCAATATTGC+TGG | + | chr1_3:54625427-54625446 | None:intergenic | 45.0% | |
| TCAGCCATACAAGGATTTGG+TGG | + | chr1_3:54625445-54625464 | None:intergenic | 45.0% | |
| GCTTCAGCCATACAAGGATT+TGG | + | chr1_3:54625448-54625467 | None:intergenic | 45.0% | |
| ATCCTTGTATGGCTGAAGCA+AGG | - | chr1_3:54625449-54625468 | Msa0125850:CDS | 45.0% | |
| TTCCTTGCTTCAGCCATACA+AGG | + | chr1_3:54625454-54625473 | None:intergenic | 45.0% | |
| TGAAGCAAGGAAAGAAGCTG+AGG | - | chr1_3:54625462-54625481 | Msa0125850:CDS | 45.0% | |
| ATGTGTGTGTGTGGACAACT+GGG | + | chr1_3:54625981-54626000 | None:intergenic | 45.0% | |
| GGGCAGTGTATTAAATAGGG+TGG | + | chr1_3:54626049-54626068 | None:intergenic | 45.0% | |
| TTATGCCTTAGTGGTGAGCA+TGG | - | chr1_3:54626269-54626288 | Msa0125850:intron | 45.0% | |
| TGGAGAACATCACACTCAAC+TGG | - | chr1_3:54626289-54626308 | Msa0125850:intron | 45.0% | |
| !! | TGTCAGAAGCTTTGTTGGAG+AGG | + | chr1_3:54626383-54626402 | None:intergenic | 45.0% |
| AAAGATTTAATGGCGGTCGC+CGG | - | chr1_3:54626525-54626544 | Msa0125850:CDS | 45.0% | |
| !!! | GTTGGTTTTGAGTGCTTCTC+CGG | + | chr1_3:54626547-54626566 | None:intergenic | 45.0% |
| ! | TGGACCAAGTGTTGTGATGT+TGG | + | chr1_3:54626565-54626584 | None:intergenic | 45.0% |
| GAAGCTGTTCTGACATAGGT+AGG | + | chr1_3:54626593-54626612 | None:intergenic | 45.0% | |
| TCCTGTTCATGTGCCTAAAG+TGG | - | chr1_3:54626998-54627017 | Msa0125850:CDS | 45.0% | |
| !! | GAACCAATGGTTGCCACTTT+AGG | + | chr1_3:54627014-54627033 | None:intergenic | 45.0% |
| GCTGAAGCTGCTCCAAAAAG+TGG | + | chr1_3:54625100-54625119 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGGACAACTG+GGG | + | chr1_3:54625980-54625999 | None:intergenic | 50.0% | |
| CATGTGTGTGTGTGGACAAC+TGG | + | chr1_3:54625982-54626001 | None:intergenic | 50.0% | |
| GTTCTCCATGCTCACCACTA+AGG | + | chr1_3:54626277-54626296 | None:intergenic | 50.0% | |
| CTTTATGTGTTCGGACGGTG+TGG | + | chr1_3:54626431-54626450 | None:intergenic | 50.0% | |
| CACACCGTCCGAACACATAA+AGG | - | chr1_3:54626429-54626448 | Msa0125850:CDS | 50.0% | |
| ! | TGCTGGTGGAAGAGCTGTTT+TGG | - | chr1_3:54626710-54626729 | Msa0125850:CDS | 50.0% |
| ! | GCCACTTTAGGCACATGAAC+AGG | + | chr1_3:54627002-54627021 | None:intergenic | 50.0% |
| GTGCCTAAAGTGGCAACCAT+TGG | - | chr1_3:54627008-54627027 | Msa0125850:CDS | 50.0% | |
| ! | GGTGGTATGGGTTGTAGTGC+TGG | - | chr1_3:54625652-54625671 | Msa0125850:CDS | 55.0% |
| CCTGTAGGAGCTGCTTAGCA+AGG | + | chr1_3:54625693-54625712 | None:intergenic | 55.0% | |
| CCTTGCTAAGCAGCTCCTAC+AGG | - | chr1_3:54625690-54625709 | Msa0125850:CDS | 55.0% | |
| TTCGGACGGTGTGGATCAGT+TGG | + | chr1_3:54626422-54626441 | None:intergenic | 55.0% | |
| CGCGCCTTTATGTGTTCGGA+CGG | + | chr1_3:54626436-54626455 | None:intergenic | 55.0% | |
| CGTCCGAACACATAAAGGCG+CGG | - | chr1_3:54626434-54626453 | Msa0125850:CDS | 55.0% | |
| CGTCCGCGCCTTTATGTGTT+CGG | + | chr1_3:54626440-54626459 | None:intergenic | 55.0% | |
| GAGGACCGTTGATCCAGCTA+AGG | - | chr1_3:54626941-54626960 | Msa0125850:CDS | 55.0% | |
| GGCGCGGACGACAGATCATA+CGG | - | chr1_3:54626450-54626469 | Msa0125850:CDS | 60.0% | |
| GTGCTGTGTGGCGTGCATTG+AGG | - | chr1_3:54626922-54626941 | Msa0125850:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 54624698 | 54627341 | 54624698 | ID=Msa0125850;Name=Msa0125850 |
| chr1_3 | mRNA | 54624698 | 54627341 | 54624698 | ID=Msa0125850-mRNA-1;Parent=Msa0125850;Name=Msa0125850-mRNA-1;_AED=0.09;_eAED=0.09;_QI=252|1|1|1|1|1|2|298|516 |
| chr1_3 | exon | 54624698 | 54625784 | 54624698 | ID=Msa0125850-mRNA-1:exon:16866;Parent=Msa0125850-mRNA-1 |
| chr1_3 | exon | 54626328 | 54627341 | 54626328 | ID=Msa0125850-mRNA-1:exon:16865;Parent=Msa0125850-mRNA-1 |
| chr1_3 | five_prime_UTR | 54627090 | 54627341 | 54627090 | ID=Msa0125850-mRNA-1:five_prime_utr;Parent=Msa0125850-mRNA-1 |
| chr1_3 | CDS | 54626328 | 54627089 | 54626328 | ID=Msa0125850-mRNA-1:cds;Parent=Msa0125850-mRNA-1 |
| chr1_3 | CDS | 54624996 | 54625784 | 54624996 | ID=Msa0125850-mRNA-1:cds;Parent=Msa0125850-mRNA-1 |
| chr1_3 | three_prime_UTR | 54624698 | 54624995 | 54624698 | ID=Msa0125850-mRNA-1:three_prime_utr;Parent=Msa0125850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
