AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1078230


Find 341 sgRNAs with CRISPR-Local

Find 1153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr7_2 gene 77088988 77106825 77088988 ID=Msa1078230;Name=Msa1078230
chr7_2 mRNA 77088988 77106825 77088988 ID=Msa1078230-mRNA-1;Parent=Msa1078230;Name=Msa1078230-mRNA-1;_AED=0.06;_eAED=0.06;_QI=257|1|1|1|1|1|21|331|1447
chr7_2 exon 77088988 77089480 77088988 ID=Msa1078230-mRNA-1:exon:18893;Parent=Msa1078230-mRNA-1
chr7_2 exon 77091623 77091724 77091623 ID=Msa1078230-mRNA-1:exon:18892;Parent=Msa1078230-mRNA-1
chr7_2 exon 77093012 77093080 77093012 ID=Msa1078230-mRNA-1:exon:18891;Parent=Msa1078230-mRNA-1
chr7_2 exon 77093199 77093267 77093199 ID=Msa1078230-mRNA-1:exon:18890;Parent=Msa1078230-mRNA-1
chr7_2 exon 77093352 77093426 77093352 ID=Msa1078230-mRNA-1:exon:18889;Parent=Msa1078230-mRNA-1
chr7_2 exon 77093595 77093699 77093595 ID=Msa1078230-mRNA-1:exon:18888;Parent=Msa1078230-mRNA-1
chr7_2 exon 77096174 77096275 77096174 ID=Msa1078230-mRNA-1:exon:18887;Parent=Msa1078230-mRNA-1
chr7_2 exon 77096936 77098743 77096936 ID=Msa1078230-mRNA-1:exon:18886;Parent=Msa1078230-mRNA-1
chr7_2 exon 77098891 77099248 77098891 ID=Msa1078230-mRNA-1:exon:18885;Parent=Msa1078230-mRNA-1
chr7_2 exon 77099331 77099429 77099331 ID=Msa1078230-mRNA-1:exon:18884;Parent=Msa1078230-mRNA-1
chr7_2 exon 77100295 77100412 77100295 ID=Msa1078230-mRNA-1:exon:18883;Parent=Msa1078230-mRNA-1
chr7_2 exon 77100483 77100568 77100483 ID=Msa1078230-mRNA-1:exon:18882;Parent=Msa1078230-mRNA-1
chr7_2 exon 77100654 77100722 77100654 ID=Msa1078230-mRNA-1:exon:18881;Parent=Msa1078230-mRNA-1
chr7_2 exon 77100800 77100874 77100800 ID=Msa1078230-mRNA-1:exon:18880;Parent=Msa1078230-mRNA-1
chr7_2 exon 77101177 77101274 77101177 ID=Msa1078230-mRNA-1:exon:18879;Parent=Msa1078230-mRNA-1
chr7_2 exon 77102473 77102634 77102473 ID=Msa1078230-mRNA-1:exon:18878;Parent=Msa1078230-mRNA-1
chr7_2 exon 77103411 77103576 77103411 ID=Msa1078230-mRNA-1:exon:18877;Parent=Msa1078230-mRNA-1
chr7_2 exon 77103752 77103820 77103752 ID=Msa1078230-mRNA-1:exon:18876;Parent=Msa1078230-mRNA-1
chr7_2 exon 77104505 77104567 77104505 ID=Msa1078230-mRNA-1:exon:18875;Parent=Msa1078230-mRNA-1
chr7_2 exon 77104670 77104825 77104670 ID=Msa1078230-mRNA-1:exon:18874;Parent=Msa1078230-mRNA-1
chr7_2 exon 77106236 77106825 77106236 ID=Msa1078230-mRNA-1:exon:18873;Parent=Msa1078230-mRNA-1
chr7_2 five_prime_UTR 77106569 77106825 77106569 ID=Msa1078230-mRNA-1:five_prime_utr;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77106236 77106568 77106236 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77104670 77104825 77104670 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77104505 77104567 77104505 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77103752 77103820 77103752 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77103411 77103576 77103411 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77102473 77102634 77102473 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77101177 77101274 77101177 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77100800 77100874 77100800 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77100654 77100722 77100654 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77100483 77100568 77100483 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77100295 77100412 77100295 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77099331 77099429 77099331 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77098891 77099248 77098891 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77096936 77098743 77096936 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77096174 77096275 77096174 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77093595 77093699 77093595 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77093352 77093426 77093352 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77093199 77093267 77093199 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77093012 77093080 77093012 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77091623 77091724 77091623 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 CDS 77089319 77089480 77089319 ID=Msa1078230-mRNA-1:cds;Parent=Msa1078230-mRNA-1
chr7_2 three_prime_UTR 77088988 77089318 77088988 ID=Msa1078230-mRNA-1:three_prime_utr;Parent=Msa1078230-mRNA-1
Gene Sequence

>Msa1078230

ATGGAGGAAGCGTTGGAACTCACACGCGCCAAAGACACAAAGGAAAGGATGGCTGGTGTGGAGCGTCTCTACCATCTTCTAGAAGCTTCTAGAAAGAGTCTTTCATCTTCTGAAGTTACTTCGCTTGTTGATTCTTGCATCGATCTCTTGAAGGATAACAATTTCCGTGTCTCTCAAGGTGCACTTCAGTCTCTCGCTTCCGCCGCTGTTCTCTCCGGCGAGCATTTCAAACTTCACTTCAACGCTCTTCTTCCCGCCGTCGTTGATCGTCTCGGTGATGCTAAACAGCCTGTTCGTGACGCCGCGCGACGACTACTTCTAACGCTGATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTCAGCTTGGGCGCACAAAAGCTGGAGAGTCAGAGAGGAGTTTACGCGAACTGTAACATCTGCAATTAATCTATTTTCATCTACCGAACTTCCACTTCAACGGGCTATCCTTCCTCCTGTTTTGCAGTTGCTAAGTGACCCAAATCTTTCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTATACACAAGCCGGACCTCAATTTCGTGATGAACTTCACCGCTACAATCTTCCTTCATCTATGGTGAAAGATATTAATGCCAGGCTAGAAGGGATTCAACCAAAAGTTCGCTCTTCAGATGGTATTCCAAGTGGTTATATTACTGGGGAAATTAAGACTTCAAATGTTAACGCCAAGAAAAGTAGTCCAAAGGCCAAAAGTTCTTCAAGGGAGGCCTCTCTTTTTGGAGCAGAAGGTGATGTCACGGAGAAACCTGTAGACCCTATCAAGATATACTCCGATAAGGAGTTAGTCAGGGAAATCGAGAAGATTGCATCTATCCTTGTGCCTGAAAAAGACTGGTCCGTTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGCGCTGCTGATTATCCATGTTTTCGTGGACTCCTGAAGCAACTTGGCGGACCTTTAAGCACACAATTGTCAGACAGAAGATCTAGCATCGTAAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATATGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCTGATTGTGCTAAAAATGACCGGAATGCAGTGCTTCGTGCAAGGTGTTGTGAGTATGCTCTTTTGGTCCTAGAACATTGGCCAGATGCACCAGAAATACATCGTTCGGCTGAGTTATATGAGGATATGATAAAGTGTTGCGTTTCAGATGCAATGAGCGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTCGCAAAAACTTGGCCAGAGCGTTCTCGTCGCCTATTTTCATCCTTTGACCCTGTTATCCAACGGTTAATAAATGAAGAGGATGGAGGAATACACAGGCGACATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGACGTCGTTACCCAGTCAAGCCTCTGCTTCGTCTAATCCACCTGGTTATGGAACATCTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCGTCGGGGACATCTGTCTCCTCTGGTGTACTTCTTTCACAGGCAAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCTTGAATATGTCTGATAAGCATAATGGATCATCTCTCCGGTCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCGTCTCGTGATCCGCCTTTTCCAGCTGCTGCCTCTGCATCCCATCATTTGACAAGCTCTTCAACAACAGAGCCTACTGCTTATGGTGTCTATAAAGGTAGTAACCGAAATGGTGGTCTGGGCTTGTCCGACATAATCACTCAAATTCAAGCTACCAAAGATTCTGCCAAGTCATCATATCATAGTAATGTTGAAATTGAGCCTTTACCATCCTCATATTCAACTAGAAGGGCTTCTGAAAGATTACAAGAAAGGAGTTCTGCTGATGACAATAGTGACATCAGGGAGGCTAGGCGATTTATAAACCACAACACTGATAAGCAGTATCTGGATGCCCCTTATAGAGAAGGAAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTTCAGAGGCCACTAGTGAGAAAGAATGCAACTGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGCTATCTCTTGGAGAAATGTCAAGTTATTCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGGTCAGGTTCTGACTGGTCTTCCAGGGTTGCTGCCTTTAACTATCTTCACTCGTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTAGCAGATATAGTTCCAGCATGTCGAAAGCCTTTTGAGGGATACATGGAAAGAATATTACCACACGTCTTTTCCCGGTTAATTGATCCTAAAGAGGTTGTTAGGCAGCCATGTTCAACAACATTGGGAGTTGTTAGCAAAACGTACAGTGTCGATTCTCTCTTACCTGCACTGTTACGTTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCCGTGATTGAATTTGCAATCAATTCCTTTAACAAACATGCAATGAATGCAGAAGGTGCTGCTAATATTGGCATATTAAAATTGTGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAGAATACGAAGCTTAAAGAAGCAGCTATTACATGCATTATTTCAGTGTATAATCACTTTGATTCGACCGCAGTTCTTAATTTCATTCTGAGTTTGTCAGTGGAAGAGCAAAATTCTCTGAGACGAGCCCTAAAACAGTACACCCCTCGCATTGAAGTAGACCTAGTAAACTATCTACAGAACAAGAAAGAGCGGCAACGTTCCAAGTCTTCCTATGATCCATCTGATGTTGTAGGAACGTCATCTGAAGATGGGTATGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGATATTCGGCTGGTTCCCTAGATAGTGATGGTGGCAGGAAGTGGAGCTCTCAGGATTCAACTCTTTTGAAATCGAGTCTTGGTCCAGCAGCTTCTGTTGAATGTGAGGATCATAATCATAGTCATAACCATAATCTTGAGACTGACTCTAATTGTGACAGTCCTGGTTCAAAACCCAAAGATCTTGCATATTCAGTCAATCCAATGGGTCAAAATTTTGGCTCTCAATCTAGCCAACTTGGACAAGTGGACAGTAGCATGAATTTCGAGGGTCTTTCAACTCCTCGTTTAGATGTTAACGGTCTGATCTCATTAGAGCGTTTAAATGTTGGTGAAGGCTATGCACTTGACAAAGAACTTCCTTCTGCATTGGAACTTAATCACCACTCAACTGAAGCTGTAAAGATCAATTCCATGGCAGACACTGGGCCCAGCATTCCTCAAATTCTTCATATGATATGCAATGCTGATGACGGTAGCCCTGTTTCAAGTAAACAGACTGCACTTCAACAGTTATTTGAAGCTTCTACAACAAATGACCAGTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACGGTTGTGCTTGAGGTGCTGGATGATTCCGATTCCTCTGTCAGAGAGCTCACTCTTTCGTTGATAGTTGAAATGCTCAAAAACCAGAAAGATGCCCTGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCGTTCCTAAGGTTTCAAATGAAGCAGAGCATTGCCTGACCATTGTTTTATCTCAGTCTGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACCGATGATGAGAAAACACTTGTCACTTGCATTAATTGCTTAACAAAGCTTGTGGGCAGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTACCTTCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGCCTTAACAGCACACAGTTGAAGCTGGTCACAATTTATGCGAATCGAATCTCACAAGCCAGGACAGGCAAAGCAATTGATACCGTTCATGATTAG

Protein sequence

>Msa1078230

MEEALELTRAKDTKERMAGVERLYHLLEASRKSLSSSEVTSLVDSCIDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSSTELPLQRAILPPVLQLLSDPNLSVREAAILCIEEMYTQAGPQFRDELHRYNLPSSMVKDINARLEGIQPKVRSSDGIPSGYITGEIKTSNVNAKKSSPKAKSSSREASLFGAEGDVTEKPVDPIKIYSDKELVREIEKIASILVPEKDWSVRIAAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALTSLPSQASASSNPPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLNMSDKHNGSSLRSSSLDLEVDPPSSRDPPFPAAASASHHLTSSSTTEPTAYGVYKGSNRNGGLGLSDIITQIQATKDSAKSSYHSNVEIEPLPSSYSTRRASERLQERSSADDNSDIREARRFINHNTDKQYLDAPYREGNFRESHNSYVPNFQRPLVRKNATGRMSAGRRRSFDDNQLSLGEMSSYSDGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLGVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNAEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYNHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLVNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSLDSDGGRKWSSQDSTLLKSSLGPAASVECEDHNHSHNHNLETDSNCDSPGSKPKDLAYSVNPMGQNFGSQSSQLGQVDSSMNFEGLSTPRLDVNGLISLERLNVGEGYALDKELPSALELNHHSTEAVKINSMADTGPSIPQILHMICNADDGSPVSSKQTALQQLFEASTTNDQSVWTKYFNQILTVVLEVLDDSDSSVRELTLSLIVEMLKNQKDALENSVEIVIEKLLHVTKDIVPKVSNEAEHCLTIVLSQSDPFRCLSVIVPLLVTDDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPSLFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDTVHD*