AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031570 MtrunA17_Chr1g0189531 87.778 90 11 0 46 135 62 151 2.83e-50 160
Msa0031570 MtrunA17_Chr1g0189641 83.146 89 15 0 48 136 1 89 1.14e-45 149
Msa0031570 MtrunA17_Chr1g0189721 74.157 89 23 0 48 136 1 89 3.82e-41 137
Msa0031570 MtrunA17_Chr1g0203281 70.787 89 26 0 48 136 1 89 3.80e-38 130
Msa0031570 MtrunA17_Chr1g0189671 68.539 89 28 0 48 136 1 89 3.18e-36 125
Msa0031570 MtrunA17_Chr1g0189611 71.739 92 23 1 48 136 1 92 3.30e-36 125
Msa0031570 MtrunA17_Chr3g0078331 66.000 100 30 2 41 136 6 105 4.25e-36 126
Msa0031570 MtrunA17_Chr1g0189821 67.391 92 27 1 48 136 1 92 7.80e-35 121
Msa0031570 MtrunA17_Chr3g0095261 68.817 93 27 1 44 136 3 93 2.59e-34 120
Msa0031570 MtrunA17_Chr1g0189661 67.778 90 26 1 48 134 1 90 3.27e-34 120
Msa0031570 MtrunA17_Chr3g0097191 67.742 93 28 1 44 136 3 93 8.90e-34 119
Msa0031570 MtrunA17_Chr1g0189711 65.217 92 29 1 48 136 1 92 3.95e-33 117
Msa0031570 MtrunA17_Chr1g0189621 71.264 87 24 1 48 134 1 86 1.96e-32 115
Msa0031570 MtrunA17_Chr1g0157451 62.921 89 30 1 48 133 1 89 2.05e-32 116
Msa0031570 MtrunA17_Chr1g0190071 68.132 91 25 2 48 134 1 91 2.30e-31 113
Msa0031570 MtrunA17_Chr7g0260801 56.481 108 37 3 36 137 1 104 4.39e-31 112
Msa0031570 MtrunA17_Chr2g0300961 67.442 86 26 2 48 131 1 86 5.26e-31 107
Msa0031570 MtrunA17_Chr1g0189701 65.116 86 27 1 47 129 31 116 3.07e-30 110
Msa0031570 MtrunA17_Chr1g0203331 74.286 70 18 0 67 136 5 74 1.01e-29 107
Msa0031570 MtrunA17_Chr1g0189751 72.414 87 24 0 48 134 1 87 3.60e-29 107
Msa0031570 MtrunA17_Chr1g0189771 52.525 99 41 2 42 136 5 101 2.94e-25 94.7
Msa0031570 MtrunA17_Chr1g0189781 51.042 96 43 1 45 136 2 97 1.45e-23 92.4
Msa0031570 MtrunA17_Chr1g0189591 50.000 90 41 1 51 136 13 102 5.26e-21 86.3
Msa0031570 MtrunA17_Chr1g0192371 37.500 88 52 1 49 133 6 93 1.73e-15 70.9
Msa0031570 MtrunA17_Chr4g0010881 47.727 88 42 3 51 136 1 86 5.19e-15 69.3
Msa0031570 MtrunA17_Chr7g0272091 41.758 91 49 2 49 136 5 94 1.49e-14 68.6
Msa0031570 MtrunA17_Chr7g0272101 45.455 88 44 3 51 136 1 86 4.32e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031570 AT1G80110.1 51.948 77 34 1 54 130 4 77 2.87e-19 81.3
Msa0031570 AT2G02250.1 44.828 87 45 1 51 137 47 130 7.04e-18 78.2
Msa0031570 AT2G02230.1 40.659 91 51 1 47 137 28 115 7.55e-18 78.6
Msa0031570 AT2G02340.1 41.667 96 55 1 39 134 24 118 8.14e-17 75.1
Msa0031570 AT5G24560.1 43.182 88 47 2 50 137 2 86 3.68e-16 71.6
Msa0031570 AT2G02240.1 43.678 87 46 1 51 137 61 144 8.32e-16 72.8
Msa0031570 AT2G02320.1 44.706 85 44 1 50 134 39 120 1.46e-15 72.0
Msa0031570 AT1G09155.1 46.429 84 43 2 54 136 3 85 5.86e-15 70.1
Msa0031570 AT2G02310.1 37.079 89 53 1 49 137 43 128 1.26e-13 66.6
Msa0031570 AT2G02350.2 39.130 92 53 1 42 133 15 103 1.62e-13 66.2
Msa0031570 AT1G56250.1 47.619 84 42 2 54 136 4 86 3.70e-13 65.1
Msa0031570 AT2G02360.1 38.372 86 50 1 49 134 12 94 1.31e-12 63.5
Msa0031570 AT1G56240.1 44.048 84 45 2 54 136 4 86 3.25e-11 59.7

Find 109 sgRNAs with CRISPR-Local

Find 904 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAACTTCTTCATCTTCT+AGG 0.152668 1_1:-58319079 None:intergenic
TATTCCAGTGATTTAAATTT+TGG 0.155770 1_1:+58319498 Msa0031570:CDS
CTTATTGTGATTTAATATAT+TGG 0.195796 1_1:+58319342 Msa0031570:five_prime_UTR
AGCTGCATACTGAGTGTTTC+GGG 0.254063 1_1:-58318835 None:intergenic
TTTGCTGCCATTTATTGATT+TGG 0.264378 1_1:+58319443 Msa0031570:CDS
CTTGTCATGGTTCAATATAT+TGG 0.294372 1_1:+58319300 Msa0031570:five_prime_UTR
TGTTGCCCACCTTCCACATT+TGG 0.295277 1_1:-58318972 None:intergenic
TGCCAACGTTTCAACCAAAA+AGG 0.305707 1_1:+58320864 Msa0031570:CDS
TTATTGTGATTTAATATATT+GGG 0.310280 1_1:+58319343 Msa0031570:five_prime_UTR
GGATTGGGATAGCTGAGTTT+TGG 0.310973 1_1:+58319364 Msa0031570:five_prime_UTR
TCAACCACTAAGATTGCATT+TGG 0.312418 1_1:+58320608 Msa0031570:intron
ATCGGGGAGTTCTTCAATTC+AGG 0.312491 1_1:+58319056 Msa0031570:five_prime_UTR
ATTTGGACGCAATAGATAAA+TGG 0.321388 1_1:-58307776 None:intergenic
TAGATCTCTTGCCATTGATT+GGG 0.325854 1_1:+58315663 Msa0031570:five_prime_UTR
GAGGGTTCCAAATCAATAAA+TGG 0.332150 1_1:-58319450 None:intergenic
CTAGATCTCTTGCCATTGAT+TGG 0.334447 1_1:+58315662 Msa0031570:five_prime_UTR
GATAACACCACGGGATAGTT+TGG 0.336653 1_1:-58318900 None:intergenic
TGATCATTGTCGATGATGAT+AGG 0.340168 1_1:-58315481 None:intergenic
CCGCCGATTCCGACGCCGTC+TGG 0.340798 1_1:+58315347 Msa0031570:five_prime_UTR
ACAAGAAGCTCAGCGACTTC+AGG 0.347960 1_1:-58318765 None:intergenic
TGCTTTAGAGAGAAACAGTT+TGG 0.356623 1_1:-58319255 None:intergenic
AGGAGTCGTGCGAGAGAGTA+TGG 0.358121 1_1:-58320719 None:intergenic
CTTGTGTTCAAGATGATTGA+TGG 0.366427 1_1:+58318861 Msa0031570:five_prime_UTR
GTGATTTAATATATTGGGAT+TGG 0.370051 1_1:+58319348 Msa0031570:five_prime_UTR
GACAGAGTTTGAGGAATTGC+CGG 0.379323 1_1:+58315240 Msa0031570:five_prime_UTR
GGATTTCTATGCCTAATTCC+AGG 0.380639 1_1:+58315710 Msa0031570:five_prime_UTR
TGATTTAATATATTGGGATT+GGG 0.389928 1_1:+58319349 Msa0031570:five_prime_UTR
AGAAGTTCAAATGAATATAA+AGG 0.393045 1_1:+58319091 Msa0031570:five_prime_UTR
TGAAATTCAGAGCTTTCAAT+TGG 0.394466 1_1:+58315603 Msa0031570:intron
TAGTACTAAAATTGTCTGTT+TGG 0.397688 1_1:+58318947 Msa0031570:five_prime_UTR
GAGAATCTGCCAACGTCAAT+AGG 0.399491 1_1:-58320739 None:intergenic
GGGTGGTTGGAGATTGAAAT+CGG 0.403576 1_1:+58319038 Msa0031570:five_prime_UTR
AACCCTCAACTATGAACGTT+GGG 0.404397 1_1:+58319466 Msa0031570:CDS
CAAAAGAATGACAGAGTTTG+AGG 0.409289 1_1:+58315231 Msa0031570:five_prime_UTR
AAGCTGCATACTGAGTGTTT+CGG 0.411984 1_1:-58318836 None:intergenic
TTCTTGAAGGAATCGAAGTT+AGG 0.415583 1_1:+58319150 Msa0031570:five_prime_UTR
ATCTAAGCTAACCTGGAATT+AGG 0.417358 1_1:-58315721 None:intergenic
CCGCCGATTCTGATGATGTC+TGG 0.418266 1_1:+58320788 Msa0031570:CDS
CAGACTCTCCGTTGTTTCCA+AGG 0.431379 1_1:+58315312 Msa0031570:five_prime_UTR
ATGATCGACGCTATTGGAAC+TGG 0.435698 1_1:+58315689 Msa0031570:five_prime_UTR
TGACCATGATCGATGATGAT+AGG 0.436300 1_1:-58320913 None:intergenic
ATGGTGGCAATACACTCTTC+AGG 0.440956 1_1:-58320700 None:intergenic
ATTCCAGACGGCGTCGGAAT+CGG 0.451722 1_1:-58315350 None:intergenic
GGTGGTTGGAGATTGAAATC+GGG 0.460102 1_1:+58319039 Msa0031570:five_prime_UTR
TGTAGTGGTCTCTTTCTTGA+AGG 0.462373 1_1:+58319137 Msa0031570:five_prime_UTR
GTTACTTAATTGTCTTACTT+AGG 0.467233 1_1:-58319173 None:intergenic
ATGACGGAAATGAAACCTTC+CGG 0.471950 1_1:-58315259 None:intergenic
CAAGAAGCTCAGCGACTTCA+GGG 0.475210 1_1:-58318764 None:intergenic
TCCCCAACGTTCATAGTTGA+GGG 0.476879 1_1:-58319468 None:intergenic
CGGCCTAGTGTGAGAAGCGA+TGG 0.477390 1_1:+58319017 Msa0031570:five_prime_UTR
GGGGTGATGATCGACGCTAT+TGG 0.479440 1_1:+58315683 Msa0031570:five_prime_UTR
ATCCCCAACGTTCATAGTTG+AGG 0.484332 1_1:-58319469 None:intergenic
CATCATCGATCATGGTCAAA+AGG 0.487205 1_1:+58320918 Msa0031570:CDS
GAGAGTCTGCCGGCGTCAGC+CGG 0.494209 1_1:-58315298 None:intergenic
CAGACCAAAATTTAAATCAC+TGG 0.496415 1_1:-58319502 None:intergenic
CAACCACTAAGATTGCATTT+GGG 0.501136 1_1:+58320609 Msa0031570:intron
AATTAAGTAACATACTATTC+TGG 0.508304 1_1:+58319185 Msa0031570:five_prime_UTR
CATCCTATCATCATCGATCA+TGG 0.512477 1_1:+58320910 Msa0031570:CDS
TCGATCATCACCCCAATCAA+TGG 0.519099 1_1:-58315674 None:intergenic
GGCGGCAGAAAGGAAAGCCT+TGG 0.522685 1_1:-58315329 None:intergenic
ATTCCAGACATCATCAGAAT+CGG 0.524392 1_1:-58320791 None:intergenic
TTCAAGATGATTGATGGCTA+TGG 0.530465 1_1:+58318867 Msa0031570:five_prime_UTR
GTTGAAACGTTGGCAAGTGA+AGG 0.536471 1_1:-58320856 None:intergenic
AGGATAGATGATATGTCAGA+AGG 0.538301 1_1:-58320823 None:intergenic
CACCCATCGCTTCTCACACT+AGG 0.546742 1_1:-58319020 None:intergenic
CGTCGGAATCGGCGGCAGAA+AGG 0.549047 1_1:-58315339 None:intergenic
CAATAGATAAATGGAAGAGA+TGG 0.555278 1_1:-58307767 None:intergenic
GATCATTGTCGATGATGATA+GGG 0.558501 1_1:-58315480 None:intergenic
GGAAACAACGGAGAGTCTGC+CGG 0.559684 1_1:-58315308 None:intergenic
AGATCTCTTGCCATTGATTG+GGG 0.560108 1_1:+58315664 Msa0031570:five_prime_UTR
TCAACTATGAACGTTGGGGA+TGG 0.562423 1_1:+58319471 Msa0031570:CDS
CAGATCGAAAAGTCTTAGAA+AGG 0.566445 1_1:-58320765 None:intergenic
TTTCAATTGGATAGAAAGAG+TGG 0.567809 1_1:+58315616 Msa0031570:five_prime_UTR
GGGCAACATAACAGCGCAGT+AGG 0.570300 1_1:+58318987 Msa0031570:five_prime_UTR
GTAGGAGCGTTGGCAAGTGA+AGG 0.572663 1_1:-58315424 None:intergenic
GTGTTATCAATTTGTGTCGA+AGG 0.573911 1_1:+58318915 Msa0031570:five_prime_UTR
TGTGAGAAGCGATGGGTGGT+TGG 0.576323 1_1:+58319025 Msa0031570:five_prime_UTR
TCGAAAAGTCTTAGAAAGGA+CGG 0.577239 1_1:-58320761 None:intergenic
CCAGACGGCGTCGGAATCGG+CGG 0.580387 1_1:-58315347 None:intergenic
GAACCCTCAACTATGAACGT+TGG 0.582240 1_1:+58319465 Msa0031570:CDS
TAAGTAACATACTATTCTGG+TGG 0.584760 1_1:+58319188 Msa0031570:five_prime_UTR
CGCACAACTCCGGCTGACGC+CGG 0.587266 1_1:+58315289 Msa0031570:five_prime_UTR
CATTCTCTCTCGCACAACTC+CGG 0.587355 1_1:+58315279 Msa0031570:five_prime_UTR
CATCATCGACAATGATCAGA+AGG 0.590425 1_1:+58315486 Msa0031570:five_prime_UTR
ACACAAATTGATAACACCAC+GGG 0.605212 1_1:-58318909 None:intergenic
TTATCAATTTGTGTCGAAGG+TGG 0.608233 1_1:+58318918 Msa0031570:five_prime_UTR
GTGGTTGGAGATTGAAATCG+GGG 0.611248 1_1:+58319040 Msa0031570:five_prime_UTR
CGATGAAATGAGAATCAGAA+GGG 0.619505 1_1:-58315381 None:intergenic
TGTCTGTTTGGATCCAAATG+TGG 0.625217 1_1:+58318959 Msa0031570:five_prime_UTR
GATTATAATTCGAAGTGTAG+TGG 0.632427 1_1:+58319122 Msa0031570:five_prime_UTR
GAGTTTGAGGAATTGCCGGA+AGG 0.634691 1_1:+58315244 Msa0031570:five_prime_UTR
TCGATGAAATGAGAATCAGA+AGG 0.636176 1_1:-58315382 None:intergenic
AGGGAGAAATTGATTCCAGA+CGG 0.640505 1_1:-58315362 None:intergenic
GGCCTAGTGTGAGAAGCGAT+GGG 0.643186 1_1:+58319018 Msa0031570:five_prime_UTR
TGGATCCAAATGTGGAAGGT+GGG 0.645556 1_1:+58318967 Msa0031570:five_prime_UTR
AAGGAAAGCCTTGGAAACAA+CGG 0.647518 1_1:-58315320 None:intergenic
CCAGACATCATCAGAATCGG+CGG 0.648846 1_1:-58320788 None:intergenic
AAATTGATTCCAGACGGCGT+CGG 0.652221 1_1:-58315356 None:intergenic
CAAGTGAAGGAGACTGTGAG+AGG 0.655481 1_1:-58320843 None:intergenic
CGCACGACTCCTATTGACGT+TGG 0.658635 1_1:+58320730 Msa0031570:CDS
ACAGCGCAGTAGGATTGCAA+CGG 0.659500 1_1:+58318997 Msa0031570:five_prime_UTR
ACCCTCAACTATGAACGTTG+GGG 0.660502 1_1:+58319467 Msa0031570:CDS
GACACAAATTGATAACACCA+CGG 0.662112 1_1:-58318910 None:intergenic
TTGGATCCAAATGTGGAAGG+TGG 0.663222 1_1:+58318966 Msa0031570:five_prime_UTR
TGTTTGGATCCAAATGTGGA+AGG 0.673961 1_1:+58318963 Msa0031570:five_prime_UTR
AGTTGTGCGAGAGAGAATGA+CGG 0.683855 1_1:-58315275 None:intergenic
TCAGAATCCAAACTATCCCG+TGG 0.688070 1_1:+58318893 Msa0031570:five_prime_UTR
CTAGTGTGAGAAGCGATGGG+TGG 0.709944 1_1:+58319021 Msa0031570:five_prime_UTR
AGTCGTGCGAGAGAGTATGG+TGG 0.752827 1_1:-58320716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAAAATTTTCCAAAAAT+GGG - chr1_1:58308059-58308078 None:intergenic 10.0%
!!! TTAATAAAATTTTCCAAAAA+TGG - chr1_1:58308060-58308079 None:intergenic 10.0%
!!! GTTAAATTTTTATTTTGTTA+GGG - chr1_1:58308946-58308965 None:intergenic 10.0%
!!! TTTTTTCAAAATTAAATCAA+AGG - chr1_1:58309082-58309101 None:intergenic 10.0%
!!! TTTAATTTTGAAAAAATCAA+TGG + chr1_1:58309086-58309105 Msa0031570:intron 10.0%
!!! ATTTAATTTTGGTTTTATTT+GGG - chr1_1:58309528-58309547 None:intergenic 10.0%
!!! TATTTAATTTTGGTTTTATT+TGG - chr1_1:58309529-58309548 None:intergenic 10.0%
!! GATTAAAAAATATTAGTTAT+TGG + chr1_1:58310541-58310560 Msa0031570:intron 10.0%
!!! TAAGTTTTTTATTAAACTAA+TGG - chr1_1:58313274-58313293 None:intergenic 10.0%
!! TTAGTTTAATAAAAAACTTA+AGG + chr1_1:58313274-58313293 Msa0031570:intron 10.0%
!!! AAAATTTTAAAAGATTTTGT+AGG + chr1_1:58315801-58315820 Msa0031570:intron 10.0%
!!! AAAAGATTTTATGAATTTTA+AGG + chr1_1:58316303-58316322 Msa0031570:intron 10.0%
!!! TTTAATAAATTAGATTTTGA+TGG - chr1_1:58316817-58316836 None:intergenic 10.0%
!! AACTTAAATAAAATTGAAAT+TGG - chr1_1:58317203-58317222 None:intergenic 10.0%
!! TTATTGTGATTTAATATATT+GGG + chr1_1:58319343-58319362 Msa0031570:five_prime_UTR 10.0%
!!! GTATTTTTGTAAAAAAATTA+GGG - chr1_1:58319954-58319973 None:intergenic 10.0%
!!! AGTATTTTTGTAAAAAAATT+AGG - chr1_1:58319955-58319974 None:intergenic 10.0%
!! ATAATTTAAAGAAATTTCAA+TGG - chr1_1:58320585-58320604 None:intergenic 10.0%
!! TTTCTGTTAATAAGTTATAT+TGG - chr1_1:58307995-58308014 None:intergenic 15.0%
!!! AAAATTTTGACAATATTTTC+GGG - chr1_1:58308033-58308052 None:intergenic 15.0%
!!! GAAAATTTTGACAATATTTT+CGG - chr1_1:58308034-58308053 None:intergenic 15.0%
!!! TAAAATATTTCTCAGATTTT+TGG - chr1_1:58308152-58308171 None:intergenic 15.0%
!! TATAAAGAAAAATTAGGTAT+TGG + chr1_1:58308381-58308400 Msa0031570:intron 15.0%
!! TATGCATATAAAAAAAGATA+AGG + chr1_1:58308506-58308525 Msa0031570:intron 15.0%
!!! GAAAATGAACAATTTTAAAA+AGG - chr1_1:58308670-58308689 None:intergenic 15.0%
!!! GAAATAGTTTTGATTTATAT+TGG + chr1_1:58308857-58308876 Msa0031570:intron 15.0%
!!! GGTTAAATTTTTATTTTGTT+AGG - chr1_1:58308947-58308966 None:intergenic 15.0%
!!! AGCATTTATACTATTTTTTA+GGG - chr1_1:58308968-58308987 None:intergenic 15.0%
!!! TTTAATTTTGGTTTTATTTG+GGG - chr1_1:58309527-58309546 None:intergenic 15.0%
!!! TCATCATTGTTATTTAATTT+TGG - chr1_1:58309539-58309558 None:intergenic 15.0%
!!! AAAAATCTATCTATTTCTAA+CGG + chr1_1:58310181-58310200 Msa0031570:intron 15.0%
!!! TTGTACTTATTTTTCTTTTT+CGG + chr1_1:58310862-58310881 Msa0031570:intron 15.0%
!! GAAAGAAAAAAAAAAGATAA+AGG - chr1_1:58312669-58312688 None:intergenic 15.0%
!! TTATATGCTAATATGAATTA+AGG - chr1_1:58312941-58312960 None:intergenic 15.0%
!! ATAAACTGTTAAAATCTAAT+AGG - chr1_1:58312966-58312985 None:intergenic 15.0%
!!! ATATATTTTACAATGCATAA+GGG - chr1_1:58312982-58313001 None:intergenic 15.0%
!!! TATATATTTTACAATGCATA+AGG - chr1_1:58313204-58313223 None:intergenic 15.0%
!! ATGATTTAATTATCATTACT+TGG + chr1_1:58314189-58314208 Msa0031570:intron 15.0%
!! AATAAGAATATATGTTACAT+AGG - chr1_1:58314834-58314853 None:intergenic 15.0%
!! AATATCTCTTATATTAACTT+TGG + chr1_1:58315534-58315553 Msa0031570:intron 15.0%
!!! TCAAAAAAAATGGATTTTTA+TGG - chr1_1:58315946-58315965 None:intergenic 15.0%
!!! ACTCATTTTTTCAAAAAAAA+TGG - chr1_1:58315956-58315975 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG + chr1_1:58316121-58316140 Msa0031570:intron 15.0%
!!! GAAAAAAGTGATTTTTTTAA+GGG + chr1_1:58316122-58316141 Msa0031570:intron 15.0%
!!! TTTACATCATAAGATTTTAA+AGG + chr1_1:58316257-58316276 Msa0031570:intron 15.0%
!!! TAAGATTTTAAAGGATTTTA+TGG + chr1_1:58316266-58316285 Msa0031570:intron 15.0%
!!! CTTTTTAATTATGAAAAAGT+TGG - chr1_1:58316955-58316974 None:intergenic 15.0%
!! ACTGTTAATGAAAATATATT+GGG - chr1_1:58317070-58317089 None:intergenic 15.0%
!! AACTGTTAATGAAAATATAT+TGG - chr1_1:58317071-58317090 None:intergenic 15.0%
!!! ACTAAATTTTGTATTCATAA+AGG - chr1_1:58317108-58317127 None:intergenic 15.0%
!! ATTGAAAAATAAATAGGATT+TGG - chr1_1:58317675-58317694 None:intergenic 15.0%
!! TGATACATTGAAAAATAAAT+AGG - chr1_1:58317681-58317700 None:intergenic 15.0%
!!! CTTTATTTGAAACTTAATTA+TGG - chr1_1:58318050-58318069 None:intergenic 15.0%
!! AGACATAATAATAATAGTTA+AGG - chr1_1:58318538-58318557 None:intergenic 15.0%
!!! TACATCTCTATTTTTTATTT+GGG - chr1_1:58318680-58318699 None:intergenic 15.0%
!!! TTACATCTCTATTTTTTATT+TGG - chr1_1:58318681-58318700 None:intergenic 15.0%
!! CTTATTGTGATTTAATATAT+TGG + chr1_1:58319342-58319361 Msa0031570:five_prime_UTR 15.0%
!!! TTTTTTTACAAAAATACTCT+TGG + chr1_1:58319957-58319976 Msa0031570:intron 15.0%
!!! TTTGTTACTTATAAGTTATA+GGG - chr1_1:58320046-58320065 None:intergenic 15.0%
!!! CTTTATTTGAAACTATATTA+CGG - chr1_1:58320457-58320476 None:intergenic 15.0%
!! TTATCATGAACGTAAATAAT+TGG + chr1_1:58307839-58307858 Msa0031570:intron 20.0%
!!! TCATGGATGAAAATTTTTAT+AGG + chr1_1:58308124-58308143 Msa0031570:intron 20.0%
!!! CATGGATGAAAATTTTTATA+GGG + chr1_1:58308125-58308144 Msa0031570:intron 20.0%
!!! CCATTTTACTTTCTTTTTTT+TGG - chr1_1:58308542-58308561 None:intergenic 20.0%
!! CCAAAAAAAAGAAAGTAAAA+TGG + chr1_1:58308539-58308558 Msa0031570:intron 20.0%
!! TCAATATATGATTGTTGTAT+TGG - chr1_1:58308830-58308849 None:intergenic 20.0%
!!! CTTTTTCTAAAAGAGTTTAA+TGG - chr1_1:58308907-58308926 None:intergenic 20.0%
!!! GAGCATTTATACTATTTTTT+AGG - chr1_1:58308969-58308988 None:intergenic 20.0%
!! ATAATCTTACTTAATCATGT+TGG - chr1_1:58309254-58309273 None:intergenic 20.0%
!! TGGAAGAAAATGATAAATAT+GGG - chr1_1:58309323-58309342 None:intergenic 20.0%
!! ATGGAAGAAAATGATAAATA+TGG - chr1_1:58309324-58309343 None:intergenic 20.0%
!!! TTTATCATTTTCTTCCATTT+TGG + chr1_1:58309326-58309345 Msa0031570:intron 20.0%
!!! TTATCATTTTCTTCCATTTT+GGG + chr1_1:58309327-58309346 Msa0031570:intron 20.0%
!! TAGTAAAAATAAGAACAAGA+AGG + chr1_1:58309485-58309504 Msa0031570:intron 20.0%
!!! ATTAAATAACAATGATGATG+AGG + chr1_1:58309541-58309560 Msa0031570:intron 20.0%
!! TTGTCAAGTTTCTTAAATAA+AGG + chr1_1:58310517-58310536 Msa0031570:intron 20.0%
!! TCTAAAAAAAAGAAGAACAT+AGG - chr1_1:58310626-58310645 None:intergenic 20.0%
!!! ATGATTTTTGGTATAAACAA+TGG + chr1_1:58311539-58311558 Msa0031570:intron 20.0%
!! TCAAGTTTCTTAAATAAAGA+AGG + chr1_1:58311614-58311633 Msa0031570:intron 20.0%
!! TGTTAAAAAACATTAGCTAT+TGG + chr1_1:58311638-58311657 Msa0031570:intron 20.0%
!!! TAACATGAAAAATCTAAAAC+CGG - chr1_1:58311918-58311937 None:intergenic 20.0%
!!! TTAGGATTTTTTTGTTAGTT+TGG - chr1_1:58312008-58312027 None:intergenic 20.0%
!!! TGTCATTTTTTTGTTCTTTA+CGG - chr1_1:58312265-58312284 None:intergenic 20.0%
!! TAAAGAACAAAAAAATGACA+AGG + chr1_1:58312265-58312284 Msa0031570:intron 20.0%
!!! TCATTTCAATTTTGTTCTTT+TGG - chr1_1:58312784-58312803 None:intergenic 20.0%
!! CCTAATTATCTACATTTATA+GGG - chr1_1:58312882-58312901 None:intergenic 20.0%
!! ACCTAATTATCTACATTTAT+AGG - chr1_1:58312883-58312902 None:intergenic 20.0%
!! TATGCATTGTAAAATATATG+AGG + chr1_1:58312983-58313002 Msa0031570:intron 20.0%
!! ATGCATTGTAAAATATATGA+GGG + chr1_1:58312984-58313003 Msa0031570:intron 20.0%
!! TGCATTGTAAAATATATATG+TGG + chr1_1:58313206-58313225 Msa0031570:intron 20.0%
!! ACTCATATATGAAATATTCA+AGG - chr1_1:58313606-58313625 None:intergenic 20.0%
!! AAAAAAAAAAAAAACAGGAG+AGG + chr1_1:58313682-58313701 Msa0031570:intron 20.0%
!!! TGCTATTTATCTAGAAAAAT+AGG - chr1_1:58313915-58313934 None:intergenic 20.0%
!! TGTTATTGAAGTTCAAATTT+GGG - chr1_1:58314077-58314096 None:intergenic 20.0%
!! ATGTTATTGAAGTTCAAATT+TGG - chr1_1:58314078-58314097 None:intergenic 20.0%
!! TTGAACTTCAATAACATTAA+CGG + chr1_1:58314081-58314100 Msa0031570:intron 20.0%
!!! TTACTTGGAAATTTTTGTTT+AGG + chr1_1:58314204-58314223 Msa0031570:intron 20.0%
!! TCATTGTATCAAATAATGAT+AGG + chr1_1:58314964-58314983 Msa0031570:intron 20.0%
!!! TTTTTTTTTTTTATGTCACG+TGG + chr1_1:58315069-58315088 Msa0031570:intron 20.0%
!!! TTTTTTTTTTTATGTCACGT+GGG + chr1_1:58315070-58315089 Msa0031570:intron 20.0%
!!! TATTCTTCTCTTTTTTGTAA+CGG + chr1_1:58315509-58315528 Msa0031570:intron 20.0%
!!! AAAAGATTTTGTAGGATTTT+AGG + chr1_1:58315809-58315828 Msa0031570:intron 20.0%
!!! AAAGATTTTGTAGGATTTTA+GGG + chr1_1:58315810-58315829 Msa0031570:intron 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG - chr1_1:58316002-58316021 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG - chr1_1:58316104-58316123 None:intergenic 20.0%
!! AAAATCATGAAAGTCATTAA+GGG - chr1_1:58316190-58316209 None:intergenic 20.0%
!! TAAAATCATGAAAGTCATTA+AGG - chr1_1:58316191-58316210 None:intergenic 20.0%
!!! ATTTTCAATTTGGATTTCAA+TGG + chr1_1:58316224-58316243 Msa0031570:intron 20.0%
!! ATGAAGACATAAGATTTATT+GGG - chr1_1:58316748-58316767 None:intergenic 20.0%
!!! TTTTCTTGTTAAAATTTCAC+TGG + chr1_1:58316776-58316795 Msa0031570:intron 20.0%
!! CAAAATCATTCAAATTTCAA+AGG - chr1_1:58316844-58316863 None:intergenic 20.0%
!! AGAAAAAATAGAAAACTTAG+GGG - chr1_1:58317013-58317032 None:intergenic 20.0%
!! GAGAAAAAATAGAAAACTTA+GGG - chr1_1:58317014-58317033 None:intergenic 20.0%
!! TGAGAAAAAATAGAAAACTT+AGG - chr1_1:58317015-58317034 None:intergenic 20.0%
!!! AAATTTTGTATTCATAAAGG+CGG - chr1_1:58317105-58317124 None:intergenic 20.0%
!! ATGAATACAAAATTTAGTTG+AGG + chr1_1:58317110-58317129 Msa0031570:intron 20.0%
!! ATCAATTTGAACTTGAATAT+AGG - chr1_1:58317839-58317858 None:intergenic 20.0%
!!! TTTGAAACTTAATTATGGAA+GGG - chr1_1:58318045-58318064 None:intergenic 20.0%
!!! ATTTGAAACTTAATTATGGA+AGG - chr1_1:58318046-58318065 None:intergenic 20.0%
!! AGTAAATTTCAAAGAAAACA+TGG - chr1_1:58318417-58318436 None:intergenic 20.0%
!!! TTTGAAATTTACTTTTGACT+TGG + chr1_1:58318424-58318443 Msa0031570:intron 20.0%
!! AGTTGCAAATATTAGAATAT+AGG - chr1_1:58318732-58318751 None:intergenic 20.0%
!! AGAAGTTCAAATGAATATAA+AGG + chr1_1:58319091-58319110 Msa0031570:five_prime_UTR 20.0%
!! AATTAAGTAACATACTATTC+TGG + chr1_1:58319185-58319204 Msa0031570:five_prime_UTR 20.0%
!! TGATTTAATATATTGGGATT+GGG + chr1_1:58319349-58319368 Msa0031570:five_prime_UTR 20.0%
!!! TATTCCAGTGATTTAAATTT+TGG + chr1_1:58319498-58319517 Msa0031570:CDS 20.0%
!!! TTTAAATTTTGGTCTGTTTA+AGG + chr1_1:58319509-58319528 Msa0031570:intron 20.0%
!! GATAATCACTAAAAAATGTT+CGG - chr1_1:58319997-58320016 None:intergenic 20.0%
!!! GAACATTTTTTAGTGATTAT+CGG + chr1_1:58319996-58320015 Msa0031570:intron 20.0%
!!! GTTTGTTACTTATAAGTTAT+AGG - chr1_1:58320047-58320066 None:intergenic 20.0%
!! ATAGCAATGAATTTATAGAA+AGG - chr1_1:58320260-58320279 None:intergenic 20.0%
! ATTTACGTTCATGATAAATG+TGG - chr1_1:58307836-58307855 None:intergenic 25.0%
! AAGATCATAGGAAAATAAAG+TGG - chr1_1:58307944-58307963 None:intergenic 25.0%
!! CAAAATTTTCTACCCATTTT+TGG + chr1_1:58308044-58308063 Msa0031570:intron 25.0%
! AAAAGTAAGGACTAATTTCA+TGG + chr1_1:58308107-58308126 Msa0031570:intron 25.0%
! ATGAGACTAAAATCAAATGT+TGG + chr1_1:58308171-58308190 Msa0031570:intron 25.0%
! TCAAATGTTGGTATATTTAG+AGG + chr1_1:58308183-58308202 Msa0031570:intron 25.0%
! CAAATGTTGGTATATTTAGA+GGG + chr1_1:58308184-58308203 Msa0031570:intron 25.0%
! ATTAGGGTTAAATACGTAAT+TGG - chr1_1:58308211-58308230 None:intergenic 25.0%
!!! ACCCTAATAATTTTAAGAAG+TGG + chr1_1:58308223-58308242 Msa0031570:intron 25.0%
! GCCACTTCTTAAAATTATTA+GGG - chr1_1:58308227-58308246 None:intergenic 25.0%
!! TGCCACTTCTTAAAATTATT+AGG - chr1_1:58308228-58308247 None:intergenic 25.0%
! AAAATGGTGTATAAAAGATG+AGG + chr1_1:58308307-58308326 Msa0031570:intron 25.0%
! GCATATAAAAAAAGATAAGG+TGG + chr1_1:58308509-58308528 Msa0031570:intron 25.0%
! AGGGTTTATATGTTTGTATT+CGG - chr1_1:58308807-58308826 None:intergenic 25.0%
! TATATGATTGTTGTATTGGA+GGG - chr1_1:58308826-58308845 None:intergenic 25.0%
! ATATATGATTGTTGTATTGG+AGG - chr1_1:58308827-58308846 None:intergenic 25.0%
!! AGGTGAAAATTGATAATCTT+TGG - chr1_1:58308991-58309010 None:intergenic 25.0%
!! GATTATCAATTTTCACCTTT+CGG + chr1_1:58308993-58309012 Msa0031570:intron 25.0%
!!! AAATTAAATCAAAGGTGCTA+AGG - chr1_1:58309074-58309093 None:intergenic 25.0%
! ACCATATAAATGTAACATCT+AGG - chr1_1:58309112-58309131 None:intergenic 25.0%
! AAGATAGAGAGTAAGATAAA+AGG - chr1_1:58309161-58309180 None:intergenic 25.0%
! GAAGAAAATGATAAATATGG+GGG - chr1_1:58309321-58309340 None:intergenic 25.0%
! GGAAGAAAATGATAAATATG+GGG - chr1_1:58309322-58309341 None:intergenic 25.0%
!! TATCATTTTCTTCCATTTTG+GGG + chr1_1:58309328-58309347 Msa0031570:intron 25.0%
!!! TTATTTTTTCTACCCCAAAA+TGG - chr1_1:58309343-58309362 None:intergenic 25.0%
! ACAAAAGAGAAAAGATTTGA+AGG + chr1_1:58309368-58309387 Msa0031570:intron 25.0%
! TTTCACATATCAAAACAAGA+TGG - chr1_1:58309647-58309666 None:intergenic 25.0%
!!! ATCTTGTTTTGATATGTGAA+AGG + chr1_1:58309646-58309665 Msa0031570:intron 25.0%
!!! TCTTGTTTTGATATGTGAAA+GGG + chr1_1:58309647-58309666 Msa0031570:intron 25.0%
! GTGGGAAATATATAGATAAA+TGG + chr1_1:58309765-58309784 Msa0031570:intron 25.0%
! ACGTAGATTGAATTTGAAAA+AGG + chr1_1:58309871-58309890 Msa0031570:intron 25.0%
! AATAGTAAAAACTAGACCAA+TGG - chr1_1:58309912-58309931 None:intergenic 25.0%
!!! TTTCAGTATCTTCAAGTTTT+GGG - chr1_1:58310105-58310124 None:intergenic 25.0%
!!! TTTTCAGTATCTTCAAGTTT+TGG - chr1_1:58310106-58310125 None:intergenic 25.0%
! GAAAATATTATGATGAGTCT+CGG + chr1_1:58310121-58310140 Msa0031570:intron 25.0%
! AAAATATTATGATGAGTCTC+GGG + chr1_1:58310122-58310141 Msa0031570:intron 25.0%
! AACAGTAAAAACTAGATCTA+TGG + chr1_1:58310258-58310277 Msa0031570:intron 25.0%
!!! GATTGATATGATTTTTTCGA+AGG - chr1_1:58310303-58310322 None:intergenic 25.0%
! TTCACATAGTAATGATTATC+TGG + chr1_1:58310767-58310786 Msa0031570:intron 25.0%
! TTTCAACGTGAAAATATTCT+TGG + chr1_1:58311472-58311491 Msa0031570:intron 25.0%
!!! GATTTTTTTGTTAGTTTGGA+GGG - chr1_1:58312004-58312023 None:intergenic 25.0%
! AAATAAAAATTGAGTGCAAC+AGG + chr1_1:58312089-58312108 Msa0031570:intron 25.0%
!! CTAATATTGCATTTGAGATA+TGG + chr1_1:58312199-58312218 Msa0031570:intron 25.0%
! TTGAAAAATCTTAGAAAGGA+TGG - chr1_1:58312364-58312383 None:intergenic 25.0%
!!! TCACTGATTTCTTGAATATT+AGG + chr1_1:58312556-58312575 Msa0031570:intron 25.0%
!!! CACTGATTTCTTGAATATTA+GGG + chr1_1:58312557-58312576 Msa0031570:intron 25.0%
!!! AGAAATCAGTGCTTTATTTA+CGG - chr1_1:58312605-58312624 None:intergenic 25.0%
! TTAGGGTTTATCATCATATT+AGG + chr1_1:58312631-58312650 Msa0031570:intron 25.0%
!! TTCTTTCTATTTTGTCCTTT+TGG + chr1_1:58312682-58312701 Msa0031570:intron 25.0%
!! GTCATCTGAAATTAAGTTAA+TGG + chr1_1:58312825-58312844 Msa0031570:intron 25.0%
! CCCTATAAATGTAGATAATT+AGG + chr1_1:58312879-58312898 Msa0031570:intron 25.0%
! TGCATTGTAAAATATATGAG+GGG + chr1_1:58312985-58313004 Msa0031570:intron 25.0%
!! GCATATTTTACAATGCATAA+GGG - chr1_1:58313181-58313200 None:intergenic 25.0%
! ATAATTGAAAGTTTCCTTGA+TGG - chr1_1:58313652-58313671 None:intergenic 25.0%
! TTTCATCTTGCATAAAAGAA+AGG - chr1_1:58313942-58313961 None:intergenic 25.0%
! AGATTATAACATCACAAATG+GGG - chr1_1:58314259-58314278 None:intergenic 25.0%
! GAGATTATAACATCACAAAT+GGG - chr1_1:58314260-58314279 None:intergenic 25.0%
! AGAGATTATAACATCACAAA+TGG - chr1_1:58314261-58314280 None:intergenic 25.0%
!! ATTTCTGTAACTTTTTGTGT+TGG + chr1_1:58314311-58314330 Msa0031570:intron 25.0%
! TAATATCGATAACACTCATT+TGG - chr1_1:58314714-58314733 None:intergenic 25.0%
! AATGAGTGTTATCGATATTA+AGG + chr1_1:58314714-58314733 Msa0031570:intron 25.0%
! AAAGGAAATTTCATTCTTGA+AGG + chr1_1:58314763-58314782 Msa0031570:intron 25.0%
!!! ACTTTTTTTTAGGGATTATG+TGG + chr1_1:58315039-58315058 Msa0031570:intron 25.0%
!!! CTTTTTTTTAGGGATTATGT+GGG + chr1_1:58315040-58315059 Msa0031570:intron 25.0%
!!! TTTTTTTTAGGGATTATGTG+GGG + chr1_1:58315041-58315060 Msa0031570:intron 25.0%
!!! TTTTTTTTTTATGTCACGTG+GGG + chr1_1:58315071-58315090 Msa0031570:intron 25.0%
! AAAAATTATACGACCGATTA+TGG + chr1_1:58315133-58315152 Msa0031570:intron 25.0%
!!! AATGGATTTTTATGGATAGT+AGG - chr1_1:58315938-58315957 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG + chr1_1:58316037-58316056 Msa0031570:intron 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG + chr1_1:58316038-58316057 Msa0031570:intron 25.0%
!! TGAAAAACATCTGAAACAAA+CGG + chr1_1:58316163-58316182 Msa0031570:intron 25.0%
!! TTGGATTTCAATGGATTTAA+AGG + chr1_1:58316233-58316252 Msa0031570:intron 25.0%
!! TTTTTATGAGAGATAGAGAA+AGG + chr1_1:58316401-58316420 Msa0031570:intron 25.0%
!! TTTTATGAGAGATAGAGAAA+GGG + chr1_1:58316402-58316421 Msa0031570:intron 25.0%
! CATGAAGACATAAGATTTAT+TGG - chr1_1:58316749-58316768 None:intergenic 25.0%
!!! TAGATTTTGATGGATTTTGT+GGG - chr1_1:58316807-58316826 None:intergenic 25.0%
!!! TTAGATTTTGATGGATTTTG+TGG - chr1_1:58316808-58316827 None:intergenic 25.0%
! GTCATTTAAAAAAAGTCTTG+AGG - chr1_1:58316913-58316932 None:intergenic 25.0%
! GTTAATGAAAATATATTGGG+TGG - chr1_1:58317067-58317086 None:intergenic 25.0%
! ATGGGAAATTCAATAATCAA+AGG - chr1_1:58317270-58317289 None:intergenic 25.0%
! AGTTATTGCTTCATTTACAT+AGG + chr1_1:58317624-58317643 Msa0031570:intron 25.0%
!!! GAGCAGAGATTTTAAAAATT+TGG - chr1_1:58317709-58317728 None:intergenic 25.0%
! AATACCAAAAGGCTTAAAAA+AGG - chr1_1:58317767-58317786 None:intergenic 25.0%
! TAATAGACTATATCAAGATG+AGG - chr1_1:58318234-58318253 None:intergenic 25.0%
! TTTCAAAGAAAACATGGTAT+TGG - chr1_1:58318411-58318430 None:intergenic 25.0%
! AGCACATATAACTTATTAAC+TGG + chr1_1:58318569-58318588 Msa0031570:intron 25.0%
! GCACATATAACTTATTAACT+GGG + chr1_1:58318570-58318589 Msa0031570:intron 25.0%
! ATATAACTTATTAACTGGGT+AGG + chr1_1:58318574-58318593 Msa0031570:intron 25.0%
! ATTCTAATATTTGCAACTGT+TGG + chr1_1:58318734-58318753 Msa0031570:intron 25.0%
!!! TTTTTTGGCTTCATATTAGT+GGG + chr1_1:58318790-58318809 Msa0031570:five_prime_UTR 25.0%
!!! AGACAATTTTAGTACTATCA+TGG - chr1_1:58318944-58318963 None:intergenic 25.0%
! TAGTACTAAAATTGTCTGTT+TGG + chr1_1:58318947-58318966 Msa0031570:five_prime_UTR 25.0%
! GTTACTTAATTGTCTTACTT+AGG - chr1_1:58319176-58319195 None:intergenic 25.0%
! GTGATTTAATATATTGGGAT+TGG + chr1_1:58319348-58319367 Msa0031570:five_prime_UTR 25.0%
! TTAAATTTGCAAGAGTTAAC+AGG - chr1_1:58319813-58319832 None:intergenic 25.0%
! TAACTCTTGCAAATTTAACA+CGG + chr1_1:58319815-58319834 Msa0031570:intron 25.0%
! AGAAACTCATATGATGAAAA+AGG - chr1_1:58319925-58319944 None:intergenic 25.0%
! TTACAAAAATACTCTTGGTT+CGG + chr1_1:58319962-58319981 Msa0031570:intron 25.0%
!! AGGAATTTGAAATTTAACGT+AGG - chr1_1:58320240-58320259 None:intergenic 25.0%
!! ATTTGAAACTATATTACGGA+AGG - chr1_1:58320453-58320472 None:intergenic 25.0%
CAATAGATAAATGGAAGAGA+TGG - chr1_1:58307770-58307789 None:intergenic 30.0%
ATTTGGACGCAATAGATAAA+TGG - chr1_1:58307779-58307798 None:intergenic 30.0%
! TAATTGGATGTCTTTTTGTG+AGG + chr1_1:58307855-58307874 Msa0031570:intron 30.0%
! TATTTTCCTATGATCTTGAG+AGG + chr1_1:58307947-58307966 Msa0031570:intron 30.0%
! CATGAGTTGACTAAAAAGTA+AGG + chr1_1:58308094-58308113 Msa0031570:intron 30.0%
!! GTGTTATTTGAACAACCATT+TGG + chr1_1:58308331-58308350 Msa0031570:intron 30.0%
TTATTTGAACAACCATTTGG+TGG + chr1_1:58308334-58308353 Msa0031570:intron 30.0%
ATATGTTTGTATTCGGTAGA+AGG - chr1_1:58308800-58308819 None:intergenic 30.0%
GCCTAGATGTTACATTTATA+TGG + chr1_1:58309108-58309127 Msa0031570:intron 30.0%
TATCAAAGACGAGAAAAAGA+GGG - chr1_1:58309214-58309233 None:intergenic 30.0%
ATATCAAAGACGAGAAAAAG+AGG - chr1_1:58309215-58309234 None:intergenic 30.0%
!! AGAATTTTTGTTTGGGAGTT+TGG + chr1_1:58309714-58309733 Msa0031570:intron 30.0%
AACGACGTTAAGTCATTTAA+AGG - chr1_1:58309976-58309995 None:intergenic 30.0%
GATAGATTACAAAGGGAAAA+TGG - chr1_1:58310014-58310033 None:intergenic 30.0%
TTCCCTTTGTAATCTATCAA+TGG + chr1_1:58310016-58310035 Msa0031570:intron 30.0%
TCCCTTTGTAATCTATCAAT+GGG + chr1_1:58310017-58310036 Msa0031570:intron 30.0%
AAATATTATGATGAGTCTCG+GGG + chr1_1:58310123-58310142 Msa0031570:intron 30.0%
! CTTGAAAATTGTATTGGTGA+GGG - chr1_1:58310343-58310362 None:intergenic 30.0%
! ACTTGAAAATTGTATTGGTG+AGG - chr1_1:58310344-58310363 None:intergenic 30.0%
GCAGTACTTGAAAATTGTAT+TGG - chr1_1:58310349-58310368 None:intergenic 30.0%
GAGGAACGAAAAAATTGTAT+TGG - chr1_1:58310371-58310390 None:intergenic 30.0%
AATACAAAACCCCTTCATTT+GGG - chr1_1:58310393-58310412 None:intergenic 30.0%
TAATACAAAACCCCTTCATT+TGG - chr1_1:58310394-58310413 None:intergenic 30.0%
TGAAAAAAGGAAGGAATAAG+TGG - chr1_1:58310469-58310488 None:intergenic 30.0%
!!! GAAGAGTTTTGAAAAAAGGA+AGG - chr1_1:58310478-58310497 None:intergenic 30.0%
ATAGGTCCAATATATAGTCT+TGG - chr1_1:58310608-58310627 None:intergenic 30.0%
! TATAAGTCTCTTAGTGGTTT+TGG + chr1_1:58311126-58311145 Msa0031570:intron 30.0%
! GATATAGCGGAAATACAATA+AGG - chr1_1:58311304-58311323 None:intergenic 30.0%
!!! GCATGTGTGTTGTTTTAAAT+CGG - chr1_1:58311352-58311371 None:intergenic 30.0%
TTAAAACAACACACATGCAT+TGG + chr1_1:58311354-58311373 Msa0031570:intron 30.0%
ACGTGAAAATATTCTTGGAA+TGG + chr1_1:58311477-58311496 Msa0031570:intron 30.0%
CAAGTGAAGTATAGTCTTTA+TGG + chr1_1:58311508-58311527 Msa0031570:intron 30.0%
!! ATGGTGGAGTATATGATTTT+TGG + chr1_1:58311527-58311546 Msa0031570:intron 30.0%
TTTGGTATAAACAATGGAAG+CGG + chr1_1:58311545-58311564 Msa0031570:intron 30.0%
CATCTAAAAACAAAGAACCT+AGG - chr1_1:58311727-58311746 None:intergenic 30.0%
ATATTTGTATTGTGAGAGTG+TGG + chr1_1:58311782-58311801 Msa0031570:intron 30.0%
GTGTTGTAAGAAATTTCACT+TGG + chr1_1:58311845-58311864 Msa0031570:intron 30.0%
GGTAATAATTCTCTAGTTGT+CGG + chr1_1:58311866-58311885 Msa0031570:intron 30.0%
!!! GGATTTTTTTGTTAGTTTGG+AGG - chr1_1:58312005-58312024 None:intergenic 30.0%
GCGATTGAAAAATCTTAGAA+AGG - chr1_1:58312368-58312387 None:intergenic 30.0%
!! CACTGATTTCTCGAATATTA+GGG + chr1_1:58312614-58312633 Msa0031570:intron 30.0%
CATCATATTAGGTAAGAGTT+TGG + chr1_1:58312642-58312661 Msa0031570:intron 30.0%
TAGATGCAAACATATGCAAA+TGG - chr1_1:58312709-58312728 None:intergenic 30.0%
AACCTCTTGTGTAAAAAACA+TGG + chr1_1:58313076-58313095 Msa0031570:intron 30.0%
!!! TACCATGTTTTTTACACAAG+AGG - chr1_1:58313081-58313100 None:intergenic 30.0%
CTTGTGTAAAAAACATGGTA+AGG + chr1_1:58313081-58313100 Msa0031570:intron 30.0%
CGTATAATACATTAAGTGGT+GGG + chr1_1:58313107-58313126 Msa0031570:intron 30.0%
! GGCATATTTTACAATGCATA+AGG - chr1_1:58313182-58313201 None:intergenic 30.0%
TATATATGTGGAAGAAACTC+TGG + chr1_1:58313218-58313237 Msa0031570:intron 30.0%
TTTCAATTGGATAGAAAGAG+TGG + chr1_1:58313421-58313440 Msa0031570:intron 30.0%
!!! AGAATTTTTCAAGACACATG+TGG - chr1_1:58313888-58313907 None:intergenic 30.0%
AAACAATGTAGCTTCTTAAC+TGG + chr1_1:58314137-58314156 Msa0031570:intron 30.0%
AACAATGTAGCTTCTTAACT+GGG + chr1_1:58314138-58314157 Msa0031570:intron 30.0%
CAACACTAAAATTGTCTGTT+TGG + chr1_1:58314518-58314537 Msa0031570:intron 30.0%
!! ATGGGAGAGTATTTCAATTT+AGG + chr1_1:58314670-58314689 Msa0031570:intron 30.0%
TTCTTGAAGGAATAGAACTT+AGG + chr1_1:58314776-58314795 Msa0031570:intron 30.0%
GTTGTTTAATTGTCTACCTT+AGG - chr1_1:58314802-58314821 None:intergenic 30.0%
CAAGTCAATTCAACCATAAT+CGG - chr1_1:58315149-58315168 None:intergenic 30.0%
! AAGCTATTGATAATAAGCCT+TGG + chr1_1:58315574-58315593 Msa0031570:intron 30.0%
TGAAATTCAGAGCTTTCAAT+TGG + chr1_1:58315603-58315622 Msa0031570:intron 30.0%
TTTCAATTGGATAGAAAGAG+TGG + chr1_1:58313421-58313440 Msa0031570:intron 30.0%
! GTATTGGATGAGGATTTTAA+AGG + chr1_1:58315754-58315773 Msa0031570:intron 30.0%
CCCTAAAATGAAAAGCTATT+AGG - chr1_1:58316041-58316060 None:intergenic 30.0%
! CATGATTTTAAATGACTGTC+AGG + chr1_1:58316201-58316220 Msa0031570:intron 30.0%
TTTATGAGAGATAGAGAAAG+GGG + chr1_1:58316403-58316422 Msa0031570:intron 30.0%
!! GTATTGGATTAGGATTTTGA+GGG - chr1_1:58316989-58317008 None:intergenic 30.0%
!! TGTATTGGATTAGGATTTTG+AGG - chr1_1:58316990-58317009 None:intergenic 30.0%
CAAAATTTAGTTGAGGCAAA+TGG + chr1_1:58317117-58317136 Msa0031570:intron 30.0%
ATTGATACTAAAATCGAGGA+AGG + chr1_1:58317150-58317169 Msa0031570:intron 30.0%
AATCTCAACACAACAATCAT+TGG - chr1_1:58317180-58317199 None:intergenic 30.0%
! TTACAATTCTCCTCATTTTC+TGG + chr1_1:58317242-58317261 Msa0031570:intron 30.0%
! AAATTTGGGTTTGAAATCGA+GGG - chr1_1:58317312-58317331 None:intergenic 30.0%
! TAAATTTGGGTTTGAAATCG+AGG - chr1_1:58317313-58317332 None:intergenic 30.0%
! ACTGAACGTGCTTTAAATTT+GGG - chr1_1:58317326-58317345 None:intergenic 30.0%
TCATTAAAGATGAAGGATCT+TGG - chr1_1:58317601-58317620 None:intergenic 30.0%
AACTGCATCATTAAAGATGA+AGG - chr1_1:58317608-58317627 None:intergenic 30.0%
CAACTTGAATGTAATAAGCA+TGG - chr1_1:58317997-58318016 None:intergenic 30.0%
! CAAGTTGAACACTATTATAC+TGG + chr1_1:58318140-58318159 Msa0031570:intron 30.0%
AATATTTGCAACTGTTGGAT+AGG + chr1_1:58318739-58318758 Msa0031570:intron 30.0%
!!! GTTTTTTGGCTTCATATTAG+TGG + chr1_1:58318789-58318808 Msa0031570:five_prime_UTR 30.0%
TTTGAACTTCTTCATCTTCT+AGG - chr1_1:58319082-58319101 None:intergenic 30.0%
GATTATAATTCGAAGTGTAG+TGG + chr1_1:58319122-58319141 Msa0031570:five_prime_UTR 30.0%
TAAGTAACATACTATTCTGG+TGG + chr1_1:58319188-58319207 Msa0031570:five_prime_UTR 30.0%
!! ACAACTTTTGTTACTTGTCA+TGG + chr1_1:58319287-58319306 Msa0031570:five_prime_UTR 30.0%
CTTGTCATGGTTCAATATAT+TGG + chr1_1:58319300-58319319 Msa0031570:five_prime_UTR 30.0%
! TTTGCTGCCATTTATTGATT+TGG + chr1_1:58319443-58319462 Msa0031570:CDS 30.0%
CAGACCAAAATTTAAATCAC+TGG - chr1_1:58319505-58319524 None:intergenic 30.0%
AAAGCTGAAACGTATTATGA+AGG + chr1_1:58319572-58319591 Msa0031570:intron 30.0%
TTGATTCCACTAAAAAGTAG+TGG - chr1_1:58319686-58319705 None:intergenic 30.0%
! TGTGAATGAGCAAAAACTTT+TGG + chr1_1:58319879-58319898 Msa0031570:intron 30.0%
! GTGAATGAGCAAAAACTTTT+GGG + chr1_1:58319880-58319899 Msa0031570:intron 30.0%
! GTTATAGGGTTTGCATATTT+TGG - chr1_1:58320032-58320051 None:intergenic 30.0%
! ACGAATACTGATGATGTTTA+TGG + chr1_1:58320359-58320378 Msa0031570:intron 30.0%
AATGTAATGACTAATGAGCA+TGG - chr1_1:58320397-58320416 None:intergenic 30.0%
GGAAGGAATGTAAGAAAATA+GGG - chr1_1:58320436-58320455 None:intergenic 30.0%
CTCATATGAATAAATGCAGA+AGG + chr1_1:58320506-58320525 Msa0031570:intron 30.0%
! TGTCATTCTTTTGTTCTTTC+TGG - chr1_1:58320665-58320684 None:intergenic 30.0%
TATTGCGTCCAAATTCAACT+TGG + chr1_1:58307785-58307804 Msa0031570:intron 35.0%
GTCCAAATTCAACTTGGAAT+GGG + chr1_1:58307791-58307810 Msa0031570:intron 35.0%
! ACACAACAACTTCATTTTCG+AGG - chr1_1:58308623-58308642 None:intergenic 35.0%
!! GTAGTATTGGTGAGCAAATT+GGG - chr1_1:58308723-58308742 None:intergenic 35.0%
!! TGTAGTATTGGTGAGCAAAT+TGG - chr1_1:58308724-58308743 None:intergenic 35.0%
!! TTGCTTGTTGTGTGTAGTAT+TGG - chr1_1:58308736-58308755 None:intergenic 35.0%
AACAAAATCCATAGCACCAA+CGG + chr1_1:58308755-58308774 Msa0031570:intron 35.0%
! ATTTTCACCTTTCGGTTCAA+TGG + chr1_1:58309001-58309020 Msa0031570:intron 35.0%
TTTCGGTTCAATGGCATTTA+GGG + chr1_1:58309010-58309029 Msa0031570:intron 35.0%
!! TAAATATGGGGGTTTGTTGT+TGG - chr1_1:58309310-58309329 None:intergenic 35.0%
AGAATATGTGAGTTCATGAG+AGG + chr1_1:58309686-58309705 Msa0031570:intron 35.0%
GAATATGTGAGTTCATGAGA+GGG + chr1_1:58309687-58309706 Msa0031570:intron 35.0%
! AGGGAAGGAGAATTTTTGTT+TGG + chr1_1:58309706-58309725 Msa0031570:intron 35.0%
!! GGGAAGGAGAATTTTTGTTT+GGG + chr1_1:58309707-58309726 Msa0031570:intron 35.0%
!! ATTTTTGTTTGGGAGTTTGG+AGG + chr1_1:58309717-58309736 Msa0031570:intron 35.0%
GACAAAACTTACGTTTCCAT+TGG + chr1_1:58309893-58309912 Msa0031570:intron 35.0%
TCCACGTGTCATAATTCTAT+TGG - chr1_1:58309937-58309956 None:intergenic 35.0%
GATTACAAAGGGAAAATGGT+TGG - chr1_1:58310010-58310029 None:intergenic 35.0%
CCCCATTGATAGATTACAAA+GGG - chr1_1:58310021-58310040 None:intergenic 35.0%
CCCTTTGTAATCTATCAATG+GGG + chr1_1:58310018-58310037 Msa0031570:intron 35.0%
TCCCCATTGATAGATTACAA+AGG - chr1_1:58310022-58310041 None:intergenic 35.0%
AACTAGATCTATGGAAACGT+AGG + chr1_1:58310267-58310286 Msa0031570:intron 35.0%
!! ATTGTATTGGTGAGGGTTTT+GGG - chr1_1:58310336-58310355 None:intergenic 35.0%
!! AATTGTATTGGTGAGGGTTT+TGG - chr1_1:58310337-58310356 None:intergenic 35.0%
AAGAAAGCGAAGATATTGAG+AGG - chr1_1:58310446-58310465 None:intergenic 35.0%
!!! GAGGGAAGAGTTTTGAAAAA+AGG - chr1_1:58310482-58310501 None:intergenic 35.0%
ACTTGACAATCAAACCCAAA+AGG - chr1_1:58310506-58310525 None:intergenic 35.0%
GGAAGACCAAGACTATATAT+TGG + chr1_1:58310599-58310618 Msa0031570:intron 35.0%
TTGTGAGTGTATGATTGTAC+TGG + chr1_1:58310700-58310719 Msa0031570:intron 35.0%
TGTGAGTGTATGATTGTACT+GGG + chr1_1:58310701-58310720 Msa0031570:intron 35.0%
TATGATTGTACTGGGTCATT+GGG + chr1_1:58310709-58310728 Msa0031570:intron 35.0%
TAAAGTGGAAACTCCAAAAC+TGG - chr1_1:58310826-58310845 None:intergenic 35.0%
CACGACACAAGAATATAAAG+TGG - chr1_1:58310841-58310860 None:intergenic 35.0%
!! TCTGTTATTTCCCAACAAAC+TGG + chr1_1:58310886-58310905 Msa0031570:intron 35.0%
! TGACTAGTTATGTCCCATAT+CGG + chr1_1:58311021-58311040 Msa0031570:intron 35.0%
AAACGTAGGATATACAAGAG+AGG + chr1_1:58311057-58311076 Msa0031570:intron 35.0%
AACGTAGGATATACAAGAGA+GGG + chr1_1:58311058-58311077 Msa0031570:intron 35.0%
! TACCTGATGCCTTAAGATTT+TGG + chr1_1:58311089-58311108 Msa0031570:intron 35.0%
! ACCTGATGCCTTAAGATTTT+GGG + chr1_1:58311090-58311109 Msa0031570:intron 35.0%
TAGTGAAGTGTGAGTAAGTA+TGG + chr1_1:58311251-58311270 Msa0031570:intron 35.0%
TTTCCGCTATATCATGCAAA+AGG + chr1_1:58311311-58311330 Msa0031570:intron 35.0%
! TGTCCTTTTGCATGATATAG+CGG - chr1_1:58311317-58311336 None:intergenic 35.0%
TGCACCATAATCTTTCAACA+CGG + chr1_1:58311449-58311468 Msa0031570:intron 35.0%
GAAACCGTGTTGAAAGATTA+TGG - chr1_1:58311456-58311475 None:intergenic 35.0%
GTGAAGTATAGTCTTTATGG+TGG + chr1_1:58311511-58311530 Msa0031570:intron 35.0%
GGATGAAACTCTTACAATCA+AGG + chr1_1:58311569-58311588 Msa0031570:intron 35.0%
TGAAACTCTTACAATCAAGG+TGG + chr1_1:58311572-58311591 Msa0031570:intron 35.0%
CTAGGTCTAATATGTAGTCT+TGG - chr1_1:58311709-58311728 None:intergenic 35.0%
CAAGACTACATATTAGACCT+AGG + chr1_1:58311707-58311726 Msa0031570:intron 35.0%
!! TTTTTGTTAGTTTGGAGGGA+AGG - chr1_1:58312000-58312019 None:intergenic 35.0%
ATTCCAGACATCATCAGAAT+CGG - chr1_1:58312393-58312412 None:intergenic 35.0%
!! GCACTGATTTCTCGAATATT+AGG + chr1_1:58312613-58312632 Msa0031570:intron 35.0%
ACATATGCAAATGGACCAAA+AGG - chr1_1:58312700-58312719 None:intergenic 35.0%
AAATATATGAGGGGTAACCT+TGG + chr1_1:58312994-58313013 Msa0031570:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr1_1:58313026-58313045 Msa0031570:intron 35.0%
GCTGCGTATAATACATTAAG+TGG + chr1_1:58313103-58313122 Msa0031570:intron 35.0%
GCGTATAATACATTAAGTGG+TGG + chr1_1:58313106-58313125 Msa0031570:intron 35.0%
TGAAATGCAGAGCTTTCAAT+TGG + chr1_1:58313408-58313427 Msa0031570:intron 35.0%
ATGATGATCGATATTGCAAC+TGG + chr1_1:58313494-58313513 Msa0031570:intron 35.0%
TTAAGAGCTAACCTAGAATC+AGG - chr1_1:58313529-58313548 None:intergenic 35.0%
GAAATATTCAAGGATTGACG+AGG - chr1_1:58313596-58313615 None:intergenic 35.0%
TTGAAAGTTTCCTTGATGGA+GGG - chr1_1:58313648-58313667 None:intergenic 35.0%
ATTGAAAGTTTCCTTGATGG+AGG - chr1_1:58313649-58313668 None:intergenic 35.0%
AAGAAAAGCCTTCTTGGTAT+GGG - chr1_1:58313717-58313736 None:intergenic 35.0%
AAAGAAAAGCCTTCTTGGTA+TGG - chr1_1:58313718-58313737 None:intergenic 35.0%
GCAAGATGAAAAACATTGAG+AGG + chr1_1:58313951-58313970 Msa0031570:intron 35.0%
TTTCTCCTCGTTAAAACTTC+TGG + chr1_1:58314019-58314038 Msa0031570:intron 35.0%
!! TCTAACCAGAAGTTTTAACG+AGG - chr1_1:58314027-58314046 None:intergenic 35.0%
! CACAAATGGGGTATTTAGAT+GGG - chr1_1:58314247-58314266 None:intergenic 35.0%
! TCACAAATGGGGTATTTAGA+TGG - chr1_1:58314248-58314267 None:intergenic 35.0%
ATACTGAGTATTTGGAGACA+AGG - chr1_1:58314409-58314428 None:intergenic 35.0%
TTCAAGATGATTGATGCCTA+TGG + chr1_1:58314444-58314463 Msa0031570:intron 35.0%
!! AGACAATTTTAGTGTTGCCA+AGG - chr1_1:58314515-58314534 None:intergenic 35.0%
CTATCTCTGATGTACAGTTT+GGG - chr1_1:58314558-58314577 None:intergenic 35.0%
TCTATCTCTGATGTACAGTT+TGG - chr1_1:58314559-58314578 None:intergenic 35.0%
TGGAAGAGTTGAATGACATA+AGG + chr1_1:58314595-58314614 Msa0031570:intron 35.0%
AGTTGAATGACATAAGGTGT+AGG + chr1_1:58314601-58314620 Msa0031570:intron 35.0%
TCATTTGGACTTCTTCAACT+TGG - chr1_1:58314699-58314718 None:intergenic 35.0%
AGTGTTATCGATATTAAGGC+TGG + chr1_1:58314718-58314737 Msa0031570:intron 35.0%
ATGAATGCTGATGAGATGAA+AGG + chr1_1:58314745-58314764 Msa0031570:intron 35.0%
TGATTGTTCAAACTCATGCA+AGG + chr1_1:58314921-58314940 Msa0031570:intron 35.0%
! AGAAAAAGAGTGTGAACTGA+AGG - chr1_1:58315187-58315206 None:intergenic 35.0%
CAAAAGAATGACAGAGTTTG+AGG + chr1_1:58315231-58315250 Msa0031570:five_prime_UTR 35.0%
CGATGAAATGAGAATCAGAA+GGG - chr1_1:58315384-58315403 None:intergenic 35.0%
TCGATGAAATGAGAATCAGA+AGG - chr1_1:58315385-58315404 None:intergenic 35.0%
!!! AGATACAGAGCTTTTTTGGT+AGG - chr1_1:58315445-58315464 None:intergenic 35.0%
!!! AGCAAGATACAGAGCTTTTT+TGG - chr1_1:58315449-58315468 None:intergenic 35.0%
GATCATTGTCGATGATGATA+GGG - chr1_1:58315483-58315502 None:intergenic 35.0%
TGATCATTGTCGATGATGAT+AGG - chr1_1:58315484-58315503 None:intergenic 35.0%
TCTGAATTTCAACACATCCA+AGG - chr1_1:58315594-58315613 None:intergenic 35.0%
! TAGATCTCTTGCCATTGATT+GGG + chr1_1:58315663-58315682 Msa0031570:five_prime_UTR 35.0%
ATCTAAGCTAACCTGGAATT+AGG - chr1_1:58315724-58315743 None:intergenic 35.0%
!! TCCAGGTTAGCTTAGATATT+AGG + chr1_1:58315727-58315746 Msa0031570:intron 35.0%
!! CCAGGTTAGCTTAGATATTA+GGG + chr1_1:58315728-58315747 Msa0031570:intron 35.0%
!! CAGGTTAGCTTAGATATTAG+GGG + chr1_1:58315729-58315748 Msa0031570:intron 35.0%
!! AGGTTAGCTTAGATATTAGG+GGG + chr1_1:58315730-58315749 Msa0031570:intron 35.0%
! TTAGATATTAGGGGGTGTAT+TGG + chr1_1:58315738-58315757 Msa0031570:intron 35.0%
! GACTGTCAGGATTTTCAATT+TGG + chr1_1:58316214-58316233 Msa0031570:intron 35.0%
TTATGAGAGATAGAGAAAGG+GGG + chr1_1:58316404-58316423 Msa0031570:intron 35.0%
! TAGAAAACTTAGGGGTGTAT+TGG - chr1_1:58317005-58317024 None:intergenic 35.0%
GGCTATTGATACTAAAATCG+AGG + chr1_1:58317146-58317165 Msa0031570:intron 35.0%
ATCAAAGGAACCAGAAAATG+AGG - chr1_1:58317255-58317274 None:intergenic 35.0%
! GACTGAACGTGCTTTAAATT+TGG - chr1_1:58317327-58317346 None:intergenic 35.0%
TCAAATATTTGTCCAAGCAC+CGG - chr1_1:58317353-58317372 None:intergenic 35.0%
ACAAATATTTGATGTCCCTG+TGG + chr1_1:58317361-58317380 Msa0031570:intron 35.0%
! GAAACACATTTTAAGCCACA+GGG - chr1_1:58317379-58317398 None:intergenic 35.0%
! AGAAACACATTTTAAGCCAC+AGG - chr1_1:58317380-58317399 None:intergenic 35.0%
CTTCCAGTGTTGTCAAATAT+TGG + chr1_1:58317408-58317427 Msa0031570:intron 35.0%
TAGCCAATATTTGACAACAC+TGG - chr1_1:58317414-58317433 None:intergenic 35.0%
! GTGTTGTCAAATATTGGCTA+TGG + chr1_1:58317414-58317433 Msa0031570:intron 35.0%
! TTGTCAAATATTGGCTATGG+TGG + chr1_1:58317417-58317436 Msa0031570:intron 35.0%
!!! ATACTTTTTTCTTTGTGCCG+TGG + chr1_1:58317472-58317491 Msa0031570:intron 35.0%
AGATAGATGAGTGAATAGCA+TGG - chr1_1:58317553-58317572 None:intergenic 35.0%
!!! TGCTCCTTTTTTAAGCCTTT+TGG + chr1_1:58317760-58317779 Msa0031570:intron 35.0%
CAATGTGTAGCAATACCAAA+AGG - chr1_1:58317778-58317797 None:intergenic 35.0%
TGGAAGGGATGTCAAAAAAT+GGG - chr1_1:58318030-58318049 None:intergenic 35.0%
ATGGAAGGGATGTCAAAAAA+TGG - chr1_1:58318031-58318050 None:intergenic 35.0%
ATATCAAGATGAGGACTACA+AGG - chr1_1:58318225-58318244 None:intergenic 35.0%
AAATTGTTTGGGCTAAGGAT+TGG + chr1_1:58318599-58318618 Msa0031570:intron 35.0%
!!! CTGAGCTTCTTGTTGTTTTT+TGG + chr1_1:58318775-58318794 Msa0031570:five_prime_UTR 35.0%
CTTGTGTTCAAGATGATTGA+TGG + chr1_1:58314438-58314457 Msa0031570:intron 35.0%
! TTCAAGATGATTGATGGCTA+TGG + chr1_1:58318867-58318886 Msa0031570:five_prime_UTR 35.0%
! ACACAAATTGATAACACCAC+GGG - chr1_1:58318912-58318931 None:intergenic 35.0%
! GACACAAATTGATAACACCA+CGG - chr1_1:58318913-58318932 None:intergenic 35.0%
GTGTTATCAATTTGTGTCGA+AGG + chr1_1:58318915-58318934 Msa0031570:five_prime_UTR 35.0%
TTATCAATTTGTGTCGAAGG+TGG + chr1_1:58318918-58318937 Msa0031570:five_prime_UTR 35.0%
TTCTTGAAGGAATCGAAGTT+AGG + chr1_1:58319150-58319169 Msa0031570:five_prime_UTR 35.0%
!! TGCTTTAGAGAGAAACAGTT+TGG - chr1_1:58319258-58319277 None:intergenic 35.0%
GAGGGTTCCAAATCAATAAA+TGG - chr1_1:58319453-58319472 None:intergenic 35.0%
!! TTTTGGTCTGTTTAAGGCAT+TGG + chr1_1:58319515-58319534 Msa0031570:intron 35.0%
TTCCACTAAAAAGTAGTGGT+GGG - chr1_1:58319682-58319701 None:intergenic 35.0%
ATTCCACTAAAAAGTAGTGG+TGG - chr1_1:58319683-58319702 None:intergenic 35.0%
TCAATACCAAGGCTTAAAAC+AGG - chr1_1:58320172-58320191 None:intergenic 35.0%
GAACATGTGTATCAATACCA+AGG - chr1_1:58320183-58320202 None:intergenic 35.0%
CGGAAGGAATGTAAGAAAAT+AGG - chr1_1:58320437-58320456 None:intergenic 35.0%
TCAACCACTAAGATTGCATT+TGG + chr1_1:58320608-58320627 Msa0031570:intron 35.0%
CAACCACTAAGATTGCATTT+GGG + chr1_1:58320609-58320628 Msa0031570:intron 35.0%
TATCCCAAATGCAATCTTAG+TGG - chr1_1:58320615-58320634 None:intergenic 35.0%
TCGAAAAGTCTTAGAAAGGA+CGG - chr1_1:58320764-58320783 None:intergenic 35.0%
CAGATCGAAAAGTCTTAGAA+AGG - chr1_1:58320768-58320787 None:intergenic 35.0%
ATTCCAGACATCATCAGAAT+CGG - chr1_1:58312393-58312412 None:intergenic 35.0%
AGGATAGATGATATGTCAGA+AGG - chr1_1:58320826-58320845 None:intergenic 35.0%
CGTCCAAATTCAACTTGGAA+TGG + chr1_1:58307790-58307809 Msa0031570:intron 40.0%
TAAAGTGGAATCCCATCAGT+CGG - chr1_1:58307929-58307948 None:intergenic 40.0%
TTTCCTATGATCTTGAGAGG+AGG + chr1_1:58307950-58307969 Msa0031570:intron 40.0%
CACACGTTCAGCTATCAAAA+TGG + chr1_1:58308291-58308310 Msa0031570:intron 40.0%
! ACCATTTGGTGGACAACTTA+TGG + chr1_1:58308345-58308364 Msa0031570:intron 40.0%
! CCATTTGGTGGACAACTTAT+GGG + chr1_1:58308346-58308365 Msa0031570:intron 40.0%
!! CAACAACTTCATTTTCGAGG+TGG - chr1_1:58308620-58308639 None:intergenic 40.0%
TTGTATTCGGTAGAAGGCTA+TGG - chr1_1:58308794-58308813 None:intergenic 40.0%
CTAAATGCCATTGAACCGAA+AGG - chr1_1:58309011-58309030 None:intergenic 40.0%
CTTTCGGTTCAATGGCATTT+AGG + chr1_1:58309009-58309028 Msa0031570:intron 40.0%
TCCTCACTCAAACGTAAATG+TGG - chr1_1:58309401-58309420 None:intergenic 40.0%
AGGAGAAAGTGAACTGAGAA+AGG + chr1_1:58309561-58309580 Msa0031570:intron 40.0%
TCTTCGCATTCGTCTTTCAT+CGG + chr1_1:58309621-58309640 Msa0031570:intron 40.0%
GCCAATAGAATTATGACACG+TGG + chr1_1:58309933-58309952 Msa0031570:intron 40.0%
ATGTTTCTCGTTCAGCGAAT+TGG + chr1_1:58310148-58310167 Msa0031570:intron 40.0%
!! TTGTATTGGTGAGGGTTTTG+GGG - chr1_1:58310335-58310354 None:intergenic 40.0%
! TTTTCGTTCCTCCCAAATGA+AGG + chr1_1:58310379-58310398 Msa0031570:intron 40.0%
TTTCGTTCCTCCCAAATGAA+GGG + chr1_1:58310380-58310399 Msa0031570:intron 40.0%
ATATTGAGAGGAGGGGATTT+GGG - chr1_1:58310434-58310453 None:intergenic 40.0%
AAGCGAAGATATTGAGAGGA+GGG - chr1_1:58310442-58310461 None:intergenic 40.0%
AAAGCGAAGATATTGAGAGG+AGG - chr1_1:58310443-58310462 None:intergenic 40.0%
! AAAACTCTTCCCTCTCCTTT+TGG + chr1_1:58310488-58310507 Msa0031570:intron 40.0%
! AAACTCTTCCCTCTCCTTTT+GGG + chr1_1:58310489-58310508 Msa0031570:intron 40.0%
CAATCAAACCCAAAAGGAGA+GGG - chr1_1:58310500-58310519 None:intergenic 40.0%
ACAATCAAACCCAAAAGGAG+AGG - chr1_1:58310501-58310520 None:intergenic 40.0%
TCTCTTAGTGTGGTGAAGTA+AGG + chr1_1:58310576-58310595 Msa0031570:intron 40.0%
CTCTTAGTGTGGTGAAGTAA+GGG + chr1_1:58310577-58310596 Msa0031570:intron 40.0%
TCTTAGTGTGGTGAAGTAAG+GGG + chr1_1:58310578-58310597 Msa0031570:intron 40.0%
!! AAGCTTAAAGTGTTGCTGAC+TGG - chr1_1:58310653-58310672 None:intergenic 40.0%
GTATGATTGTACTGGGTCAT+TGG + chr1_1:58310708-58310727 Msa0031570:intron 40.0%
ATGATTGTACTGGGTCATTG+GGG + chr1_1:58310710-58310729 Msa0031570:intron 40.0%
!!! CGTGGTTTTTTCTCCAGTTT+TGG + chr1_1:58310810-58310829 Msa0031570:intron 40.0%
AGAGCCATGGTTATGCTTAA+TGG + chr1_1:58310913-58310932 Msa0031570:intron 40.0%
GAGCCATGGTTATGCTTAAT+GGG + chr1_1:58310914-58310933 Msa0031570:intron 40.0%
AGCCATGGTTATGCTTAATG+GGG + chr1_1:58310915-58310934 Msa0031570:intron 40.0%
ACGTAGGATATACAAGAGAG+GGG + chr1_1:58311059-58311078 Msa0031570:intron 40.0%
! ACCCAAAATCTTAAGGCATC+AGG - chr1_1:58311094-58311113 None:intergenic 40.0%
! TGATGCCTTAAGATTTTGGG+TGG + chr1_1:58311093-58311112 Msa0031570:intron 40.0%
CATCTCCACCCAAAATCTTA+AGG - chr1_1:58311101-58311120 None:intergenic 40.0%
!! TAAGATTTTGGGTGGAGATG+TGG + chr1_1:58311101-58311120 Msa0031570:intron 40.0%
GTGGTGTATAAGTCTCTTAG+TGG + chr1_1:58311120-58311139 Msa0031570:intron 40.0%
TGGCTCTTATACCACTTGTA+GGG - chr1_1:58311182-58311201 None:intergenic 40.0%
ATGGCTCTTATACCACTTGT+AGG - chr1_1:58311183-58311202 None:intergenic 40.0%
GTGGTATAAGAGCCATTGTT+AGG + chr1_1:58311187-58311206 Msa0031570:intron 40.0%
ATAAGAGCCATTGTTAGGCT+CGG + chr1_1:58311192-58311211 Msa0031570:intron 40.0%
TTCACTACATGATCCACACT+AGG - chr1_1:58311238-58311257 None:intergenic 40.0%
! AACAACACACATGCATTGGT+TGG + chr1_1:58311358-58311377 Msa0031570:intron 40.0%
ACAATCAAGGTGGAGATTGT+TGG + chr1_1:58311582-58311601 Msa0031570:intron 40.0%
CAATCAAGGTGGAGATTGTT+GGG + chr1_1:58311583-58311602 Msa0031570:intron 40.0%
! TTGTGAGAGTGTGGTTAAAC+TGG + chr1_1:58311791-58311810 Msa0031570:intron 40.0%
! TGTGAGAGTGTGGTTAAACT+GGG + chr1_1:58311792-58311811 Msa0031570:intron 40.0%
!! CTAGTTGTCGGTTTAGACAA+CGG + chr1_1:58311878-58311897 Msa0031570:intron 40.0%
! AACGGTTGTGATTTTCTCTC+CGG + chr1_1:58311896-58311915 Msa0031570:intron 40.0%
TATGGTGGCAATACATCCTT+CGG - chr1_1:58312304-58312323 None:intergenic 40.0%
TGAGAGGATAGATGAGATGT+CGG - chr1_1:58312429-58312448 None:intergenic 40.0%
CAAGTGAAGAAGATTGTGAG+AGG - chr1_1:58312445-58312464 None:intergenic 40.0%
TGCCAACATTCCAACCAAAA+AGG + chr1_1:58312463-58312482 Msa0031570:intron 40.0%
!!! AGCCTTTTTGGTTGGAATGT+TGG - chr1_1:58312468-58312487 None:intergenic 40.0%
!! AGATAGAGAGCCTTTTTGGT+TGG - chr1_1:58312476-58312495 None:intergenic 40.0%
TGACCATGATCGATGATGAT+AGG - chr1_1:58312515-58312534 None:intergenic 40.0%
CATCATCGATCATGGTCAAA+AGG + chr1_1:58312517-58312536 Msa0031570:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG - chr1_1:58313070-58313089 None:intergenic 40.0%
TAGATCTCTCGACATTGCTT+GGG + chr1_1:58313468-58313487 Msa0031570:intron 40.0%
CTCAGAAAGAAAAGCCTTCT+TGG - chr1_1:58313723-58313742 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr1_1:58313801-58313820 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr1_1:58313809-58313828 Msa0031570:intron 40.0%
AGGAGATGTGGCTGAAAAAT+AGG + chr1_1:58313829-58313848 Msa0031570:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr1_1:58313835-58313854 Msa0031570:intron 40.0%
TTGCTTATCTTCGTCTTGTG+TGG + chr1_1:58314349-58314368 Msa0031570:intron 40.0%
AGTATTTGGAGACAAGGCAA+GGG - chr1_1:58314403-58314422 None:intergenic 40.0%
GTCTCCAAATACTCAGTATG+CGG + chr1_1:58314410-58314429 Msa0031570:intron 40.0%
TAAGCCGCATACTGAGTATT+TGG - chr1_1:58314417-58314436 None:intergenic 40.0%
TGTCTGTTTGGATCCAAACA+TGG + chr1_1:58314530-58314549 Msa0031570:intron 40.0%
! TACAGTTTGGGTTCCATGTT+TGG - chr1_1:58314546-58314565 None:intergenic 40.0%
TGTACATCAGAGATAGAAGC+TGG + chr1_1:58314562-58314581 Msa0031570:intron 40.0%
TCAGAGATAGAAGCTGGTAT+CGG + chr1_1:58314568-58314587 Msa0031570:intron 40.0%
TTTGGACTTCTTCAACTTGG+AGG - chr1_1:58314696-58314715 None:intergenic 40.0%
AGGAATAGAACTTAGGCCTA+AGG + chr1_1:58314783-58314802 Msa0031570:intron 40.0%
! ATGACGGAAATGAAACCTTC+CGG - chr1_1:58315262-58315281 None:intergenic 40.0%
AAGGAAAGCCTTGGAAACAA+CGG - chr1_1:58315323-58315342 None:intergenic 40.0%
! AGGGAGAAATTGATTCCAGA+CGG - chr1_1:58315365-58315384 None:intergenic 40.0%
CATCATCGACAATGATCAGA+AGG + chr1_1:58315486-58315505 Msa0031570:five_prime_UTR 40.0%
CTAGATCTCTTGCCATTGAT+TGG + chr1_1:58315662-58315681 Msa0031570:five_prime_UTR 40.0%
! AGATCTCTTGCCATTGATTG+GGG + chr1_1:58315664-58315683 Msa0031570:five_prime_UTR 40.0%
GGATTTCTATGCCTAATTCC+AGG + chr1_1:58315710-58315729 Msa0031570:five_prime_UTR 40.0%
CCCTAATATCTAAGCTAACC+TGG - chr1_1:58315731-58315750 None:intergenic 40.0%
TATGAGAGATAGAGAAAGGG+GGG + chr1_1:58316405-58316424 Msa0031570:intron 40.0%
AAAAGAGAGGAGAGAGAGAA+GGG + chr1_1:58316664-58316683 Msa0031570:intron 40.0%
GGAAAAGAGAGAAGGAAGAA+GGG + chr1_1:58316685-58316704 Msa0031570:intron 40.0%
! ACTTAGGGGTGTATTGGATT+AGG - chr1_1:58316999-58317018 None:intergenic 40.0%
AGTTGAGGCAAATGGATAAG+TGG + chr1_1:58317125-58317144 Msa0031570:intron 40.0%
ATAGCTACGTGGAGTAACAT+GGG - chr1_1:58317288-58317307 None:intergenic 40.0%
TAAAGCACGTTCAGTCAAAC+CGG + chr1_1:58317331-58317350 Msa0031570:intron 40.0%
TCACTTCTGCTAAGTATCAG+CGG + chr1_1:58317520-58317539 Msa0031570:intron 40.0%
!! ATGAAGGATCTTGGTGTTCA+AGG - chr1_1:58317592-58317611 None:intergenic 40.0%
! TCTGATGTCCTTGTTGATGA+AGG - chr1_1:58317921-58317940 None:intergenic 40.0%
TCATCAACAAGGACATCAGA+TGG + chr1_1:58317921-58317940 Msa0031570:intron 40.0%
! ATGATGACTGATGACGTTCA+TGG + chr1_1:58317959-58317978 Msa0031570:intron 40.0%
TGTAATAAGCATGGCAGACA+AGG - chr1_1:58317988-58318007 None:intergenic 40.0%
GGAAGGGATGTCAAAAAATG+GGG - chr1_1:58318029-58318048 None:intergenic 40.0%
AAATGAGTCAGCTTGTGTCT+AGG + chr1_1:58318199-58318218 Msa0031570:intron 40.0%
TTGAAATGCGCACATGTCTA+CGG + chr1_1:58318267-58318286 Msa0031570:intron 40.0%
ACTGGGTAGGTCAAATTGTT+TGG + chr1_1:58318587-58318606 Msa0031570:intron 40.0%
CTGGGTAGGTCAAATTGTTT+GGG + chr1_1:58318588-58318607 Msa0031570:intron 40.0%
AGGTCAAATTGTTTGGGCTA+AGG + chr1_1:58318594-58318613 Msa0031570:intron 40.0%
AAGCTGCATACTGAGTGTTT+CGG - chr1_1:58318839-58318858 None:intergenic 40.0%
TGTCTGTTTGGATCCAAATG+TGG + chr1_1:58318959-58318978 Msa0031570:five_prime_UTR 40.0%
TGTTTGGATCCAAATGTGGA+AGG + chr1_1:58318963-58318982 Msa0031570:five_prime_UTR 40.0%
TGTAGTGGTCTCTTTCTTGA+AGG + chr1_1:58319137-58319156 Msa0031570:five_prime_UTR 40.0%
AACCCTCAACTATGAACGTT+GGG + chr1_1:58319466-58319485 Msa0031570:CDS 40.0%
TACTCAGTGTGTGAAATGGA+AGG + chr1_1:58319612-58319631 Msa0031570:intron 40.0%
TTTCACACACTGATGTGTGA+TGG - chr1_1:58319649-58319668 None:intergenic 40.0%
TCACACATCAGTGTGTGAAA+TGG + chr1_1:58319649-58319668 Msa0031570:intron 40.0%
ATCAGTGTGTGAAATGGCAT+TGG + chr1_1:58319655-58319674 Msa0031570:intron 40.0%
! TAACTCATGCAGGGCTATTT+TGG + chr1_1:58319846-58319865 Msa0031570:intron 40.0%
!! GAAGTTCCTGTTTTAAGCCT+TGG + chr1_1:58320163-58320182 Msa0031570:intron 40.0%
CTAAGTCCTTACTACTAGTC+AGG + chr1_1:58320310-58320329 Msa0031570:intron 40.0%
ACTAATGAGCATGGTTGACA+AGG - chr1_1:58320388-58320407 None:intergenic 40.0%
TGAGTGTGTGACAATGTACT+CGG + chr1_1:58320479-58320498 Msa0031570:intron 40.0%
TGCCAACGTTTCAACCAAAA+AGG + chr1_1:58320864-58320883 Msa0031570:CDS 40.0%
!!! AGCCTTTTTGGTTGAAACGT+TGG - chr1_1:58320869-58320888 None:intergenic 40.0%
CATCCTATCATCATCGATCA+TGG + chr1_1:58320910-58320929 Msa0031570:CDS 40.0%
TGACCATGATCGATGATGAT+AGG - chr1_1:58312515-58312534 None:intergenic 40.0%
CATCATCGATCATGGTCAAA+AGG + chr1_1:58312517-58312536 Msa0031570:intron 40.0%
! GGCCCATTCCAAGTTGAATT+TGG - chr1_1:58307796-58307815 None:intergenic 45.0%
GTGGATAGATGCATCACATG+TGG - chr1_1:58307817-58307836 None:intergenic 45.0%
CCCATAAGTTGTCCACCAAA+TGG - chr1_1:58308349-58308368 None:intergenic 45.0%
! TGGTGAGCAAATTGGGTTGT+GGG - chr1_1:58308716-58308735 None:intergenic 45.0%
! TTGGTGAGCAAATTGGGTTG+TGG - chr1_1:58308717-58308736 None:intergenic 45.0%
ATTCGGTAGAAGGCTATGGT+GGG - chr1_1:58308790-58308809 None:intergenic 45.0%
TATTCGGTAGAAGGCTATGG+TGG - chr1_1:58308791-58308810 None:intergenic 45.0%
ACGAGAAAAAGAGGGAGAGA+GGG - chr1_1:58309206-58309225 None:intergenic 45.0%
GCCACATTTACGTTTGAGTG+AGG + chr1_1:58309397-58309416 Msa0031570:intron 45.0%
ATGTGAGTTCATGAGAGGGA+AGG + chr1_1:58309691-58309710 Msa0031570:intron 45.0%
GAGTTTGGAGGAGATGAGAA+GGG + chr1_1:58309729-58309748 Msa0031570:intron 45.0%
AGATGAGAAGGGACGACTTA+AGG + chr1_1:58309740-58309759 Msa0031570:intron 45.0%
GATGAGAAGGGACGACTTAA+GGG + chr1_1:58309741-58309760 Msa0031570:intron 45.0%
ATGAGAAGGGACGACTTAAG+GGG + chr1_1:58309742-58309761 Msa0031570:intron 45.0%
TGGTTCGTTGACAATGTAGG+TGG - chr1_1:58310070-58310089 None:intergenic 45.0%
ACCTACATTGTCAACGAACC+AGG + chr1_1:58310069-58310088 Msa0031570:intron 45.0%
! ACCTGGTTCGTTGACAATGT+AGG - chr1_1:58310073-58310092 None:intergenic 45.0%
!! GTTTTGGGCAACAATTCACC+TGG - chr1_1:58310090-58310109 None:intergenic 45.0%
TCGTTCAGCGAATTGGAATC+TGG + chr1_1:58310155-58310174 Msa0031570:intron 45.0%
TTCGTTCCTCCCAAATGAAG+GGG + chr1_1:58310381-58310400 Msa0031570:intron 45.0%
ACAAAACCCCTTCATTTGGG+AGG - chr1_1:58310390-58310409 None:intergenic 45.0%
TATTGAGAGGAGGGGATTTG+GGG - chr1_1:58310433-58310452 None:intergenic 45.0%
GATATTGAGAGGAGGGGATT+TGG - chr1_1:58310435-58310454 None:intergenic 45.0%
AGCGAAGATATTGAGAGGAG+GGG - chr1_1:58310441-58310460 None:intergenic 45.0%
ACGTACCACATCTCTTAGTG+TGG + chr1_1:58310566-58310585 Msa0031570:intron 45.0%
CTTCACCACACTAAGAGATG+TGG - chr1_1:58310574-58310593 None:intergenic 45.0%
!! GTCGTTTTAGACAACGATCG+TGG + chr1_1:58310792-58310811 Msa0031570:intron 45.0%
! GGCTCTGATACCAGTTTGTT+GGG - chr1_1:58310899-58310918 None:intergenic 45.0%
!! TGGCTCTGATACCAGTTTGT+TGG - chr1_1:58310900-58310919 None:intergenic 45.0%
ACAAACTGGTATCAGAGCCA+TGG + chr1_1:58310900-58310919 Msa0031570:intron 45.0%
GCCATGGTTATGCTTAATGG+GGG + chr1_1:58310916-58310935 Msa0031570:intron 45.0%
TCCCCCATTAAGCATAACCA+TGG - chr1_1:58310920-58310939 None:intergenic 45.0%
GTTATGCTTAATGGGGGAGT+GGG + chr1_1:58310922-58310941 Msa0031570:intron 45.0%
! TGTCCCATATCGGCTAGAAA+TGG + chr1_1:58311031-58311050 Msa0031570:intron 45.0%
!! CCTCCATTTCTAGCCGATAT+GGG - chr1_1:58311037-58311056 None:intergenic 45.0%
!! TCCTCCATTTCTAGCCGATA+TGG - chr1_1:58311038-58311057 None:intergenic 45.0%
GCTAGAAATGGAGGAAACGT+AGG + chr1_1:58311043-58311062 Msa0031570:intron 45.0%
TTTAACTCATTGTCGCTCCC+TGG + chr1_1:58311152-58311171 Msa0031570:intron 45.0%
GGCTCTTATACCACTTGTAG+GGG - chr1_1:58311181-58311200 None:intergenic 45.0%
!! TGGCATTGATGCAAAGTGTG+TGG + chr1_1:58311378-58311397 Msa0031570:intron 45.0%
TTATGGTGCAACTCGCATGT+TGG - chr1_1:58311439-58311458 None:intergenic 45.0%
GGTATAAACAATGGAAGCGG+AGG + chr1_1:58311548-58311567 Msa0031570:intron 45.0%
!! TTGCTTGGTGTGGTGATGTA+AGG + chr1_1:58311677-58311696 Msa0031570:intron 45.0%
!! TGCTTGGTGTGGTGATGTAA+GGG + chr1_1:58311678-58311697 Msa0031570:intron 45.0%
! GTGAGAGTGTGGTTAAACTG+GGG + chr1_1:58311793-58311812 Msa0031570:intron 45.0%
!! GTGGTCGTTGTTTCTCTCTT+AGG - chr1_1:58312026-58312045 None:intergenic 45.0%
AACAACGACCACATCGACAT+TGG + chr1_1:58312034-58312053 Msa0031570:intron 45.0%
TAGAACGACGTGCAACTGAA+AGG + chr1_1:58312065-58312084 Msa0031570:intron 45.0%
AGGTTTGAAGAATTGCCCGA+AGG + chr1_1:58312285-58312304 Msa0031570:intron 45.0%
ATGGTGGCAATACATCCTTC+GGG - chr1_1:58312303-58312322 None:intergenic 45.0%
TGTATTGCCACCATACTCTC+TGG + chr1_1:58312309-58312328 Msa0031570:intron 45.0%
GAGAACCTGCCAACATCAAT+TGG - chr1_1:58312342-58312361 None:intergenic 45.0%
GGATAGATGAGATGTCGGAA+GGG - chr1_1:58312424-58312443 None:intergenic 45.0%
AGGATAGATGAGATGTCGGA+AGG - chr1_1:58312425-58312444 None:intergenic 45.0%
! AGCGAGATAGAGAGCCTTTT+TGG - chr1_1:58312480-58312499 None:intergenic 45.0%
CGTCCTATCATCATCGATCA+TGG + chr1_1:58312509-58312528 Msa0031570:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr1_1:58313030-58313049 Msa0031570:intron 45.0%
TACAATGCATAAGGGCAACC+CGG - chr1_1:58313173-58313192 None:intergenic 45.0%
AGCAATGTCGAGAGATCTAG+CGG - chr1_1:58313467-58313486 None:intergenic 45.0%
CTAGATCTCTCGACATTGCT+TGG + chr1_1:58313467-58313486 Msa0031570:intron 45.0%
AGATCTCTCGACATTGCTTG+GGG + chr1_1:58313469-58313488 Msa0031570:intron 45.0%
GGATTGTTGTGCCTGATTCT+AGG + chr1_1:58313515-58313534 Msa0031570:intron 45.0%
TGATCCTATTCCCTCCATCA+AGG + chr1_1:58313635-58313654 Msa0031570:intron 45.0%
GTTTCCTTGATGGAGGGAAT+AGG - chr1_1:58313642-58313661 None:intergenic 45.0%
CGAATATGCCCATACCAAGA+AGG + chr1_1:58313706-58313725 Msa0031570:intron 45.0%
TGCCACAATTCAAGGAGATG+TGG + chr1_1:58313817-58313836 Msa0031570:intron 45.0%
AGCCACATCTCCTTGAATTG+TGG - chr1_1:58313822-58313841 None:intergenic 45.0%
GACGAAGATAAGCAACCTCT+GGG - chr1_1:58314344-58314363 None:intergenic 45.0%
AGACGAAGATAAGCAACCTC+TGG - chr1_1:58314345-58314364 None:intergenic 45.0%
GAGTATTTGGAGACAAGGCA+AGG - chr1_1:58314404-58314423 None:intergenic 45.0%
TGATTGATGCCTATGGACGT+AGG + chr1_1:58314451-58314470 Msa0031570:intron 45.0%
ATGCCAACGAATAAGTCCAC+GGG - chr1_1:58314483-58314502 None:intergenic 45.0%
GATGCCAACGAATAAGTCCA+CGG - chr1_1:58314484-58314503 None:intergenic 45.0%
! GACTTATTCGTTGGCATCGA+AGG + chr1_1:58314486-58314505 Msa0031570:intron 45.0%
! TTATTCGTTGGCATCGAAGG+TGG + chr1_1:58314489-58314508 Msa0031570:intron 45.0%
CAGAGATAGAAGCTGGTATC+GGG + chr1_1:58314569-58314588 Msa0031570:intron 45.0%
GTCCTAGTGTGAGAAGTGAT+GGG + chr1_1:58314632-58314651 Msa0031570:intron 45.0%
GACAGAGTTTGAGGAATTGC+CGG + chr1_1:58315240-58315259 Msa0031570:five_prime_UTR 45.0%
AGTTGTGCGAGAGAGAATGA+CGG - chr1_1:58315278-58315297 None:intergenic 45.0%
! AAATTGATTCCAGACGGCGT+CGG - chr1_1:58315359-58315378 None:intergenic 45.0%
!!! AGCTTTTTTGGTAGGAGCGT+TGG - chr1_1:58315437-58315456 None:intergenic 45.0%
TCGATCATCACCCCAATCAA+TGG - chr1_1:58315677-58315696 None:intergenic 45.0%
ATGATCGACGCTATTGGAAC+TGG + chr1_1:58315689-58315708 Msa0031570:five_prime_UTR 45.0%
! ATTAGGGGGTGTATTGGATG+AGG + chr1_1:58315744-58315763 Msa0031570:intron 45.0%
AGAGAGAAGGGAGAAAAGAG+AGG + chr1_1:58316429-58316448 Msa0031570:intron 45.0%
AGAAAAGAGAGGAGTGAGAG+AGG + chr1_1:58316440-58316459 Msa0031570:intron 45.0%
GAAAAGAGAGGAGTGAGAGA+GGG + chr1_1:58316441-58316460 Msa0031570:intron 45.0%
AGAGAGAAGGGAGAAAAGAG+AGG + chr1_1:58316429-58316448 Msa0031570:intron 45.0%
AGAGAGAGAGAGAGAGAGAA+GGG + chr1_1:58316598-58316617 Msa0031570:intron 45.0%
AGAGAGAGACGAAGAGAGAA+GGG + chr1_1:58316626-58316645 Msa0031570:intron 45.0%
GAAAAGAGAGGAGAGAGAGA+AGG + chr1_1:58316663-58316682 Msa0031570:intron 45.0%
GAGAGAAGGGAAAAGAGAGA+AGG + chr1_1:58316677-58316696 Msa0031570:intron 45.0%
GGGAAAAGAGAGAAGGAAGA+AGG + chr1_1:58316684-58316703 Msa0031570:intron 45.0%
CATAGCTACGTGGAGTAACA+TGG - chr1_1:58317289-58317308 None:intergenic 45.0%
AAGTGATGTGCTATCGATGG+TGG - chr1_1:58317506-58317525 None:intergenic 45.0%
CAGAAGTGATGTGCTATCGA+TGG - chr1_1:58317509-58317528 None:intergenic 45.0%
!! CTTGGTGTTCAAGGTGAACT+TGG - chr1_1:58317583-58317602 None:intergenic 45.0%
ATTTGGCTGTCGCGACAATT+AGG - chr1_1:58317658-58317677 None:intergenic 45.0%
! GTCCTTGTTGATGAAGGACT+CGG - chr1_1:58317915-58317934 None:intergenic 45.0%
AGGACATCAGATGGTCTTTG+AGG + chr1_1:58317930-58317949 Msa0031570:intron 45.0%
AGGTCTGACAGTAGATTGCT+TGG - chr1_1:58318453-58318472 None:intergenic 45.0%
CACAAATGAACGTCTGAGTG+AGG - chr1_1:58318473-58318492 None:intergenic 45.0%
CTCACTCAGACGTTCATTTG+TGG + chr1_1:58318471-58318490 Msa0031570:intron 45.0%
ACTCAGACGTTCATTTGTGG+AGG + chr1_1:58318474-58318493 Msa0031570:intron 45.0%
AGCTGCATACTGAGTGTTTC+GGG - chr1_1:58318838-58318857 None:intergenic 45.0%
TCAGAATCCAAACTATCCCG+TGG + chr1_1:58318893-58318912 Msa0031570:five_prime_UTR 45.0%
GATAACACCACGGGATAGTT+TGG - chr1_1:58318903-58318922 None:intergenic 45.0%
TTGGATCCAAATGTGGAAGG+TGG + chr1_1:58318966-58318985 Msa0031570:five_prime_UTR 45.0%
TGGATCCAAATGTGGAAGGT+GGG + chr1_1:58318967-58318986 Msa0031570:five_prime_UTR 45.0%
GGGTGGTTGGAGATTGAAAT+CGG + chr1_1:58319038-58319057 Msa0031570:five_prime_UTR 45.0%
GGTGGTTGGAGATTGAAATC+GGG + chr1_1:58319039-58319058 Msa0031570:five_prime_UTR 45.0%
GTGGTTGGAGATTGAAATCG+GGG + chr1_1:58319040-58319059 Msa0031570:five_prime_UTR 45.0%
ATCGGGGAGTTCTTCAATTC+AGG + chr1_1:58319056-58319075 Msa0031570:five_prime_UTR 45.0%
! GGATTGGGATAGCTGAGTTT+TGG + chr1_1:58319364-58319383 Msa0031570:five_prime_UTR 45.0%
GAACCCTCAACTATGAACGT+TGG + chr1_1:58319465-58319484 Msa0031570:CDS 45.0%
ACCCTCAACTATGAACGTTG+GGG + chr1_1:58319467-58319486 Msa0031570:CDS 45.0%
TCCCCAACGTTCATAGTTGA+GGG - chr1_1:58319471-58319490 None:intergenic 45.0%
ATCCCCAACGTTCATAGTTG+AGG - chr1_1:58319472-58319491 None:intergenic 45.0%
TCAACTATGAACGTTGGGGA+TGG + chr1_1:58319471-58319490 Msa0031570:CDS 45.0%
!! TTCACACACTGAGTACTGGA+AGG - chr1_1:58319607-58319626 None:intergenic 45.0%
CCATTTCACACACTGAGTAC+TGG - chr1_1:58319611-58319630 None:intergenic 45.0%
CCAGTACTCAGTGTGTGAAA+TGG + chr1_1:58319608-58319627 Msa0031570:intron 45.0%
!!! GTCCCACCACTACTTTTTAG+TGG + chr1_1:58319677-58319696 Msa0031570:intron 45.0%
GTGGCTAGGAAAATGTGTGA+TGG - chr1_1:58319712-58319731 None:intergenic 45.0%
AGCGTGAGTTAACTCACGTT+GGG + chr1_1:58319772-58319791 Msa0031570:intron 45.0%
TGCTGTCCTGACTAGTAGTA+AGG - chr1_1:58320319-58320338 None:intergenic 45.0%
TTACTACTAGTCAGGACAGC+AGG + chr1_1:58320318-58320337 Msa0031570:intron 45.0%
ATGGTGGCAATACACTCTTC+AGG - chr1_1:58320703-58320722 None:intergenic 45.0%
GAGAATCTGCCAACGTCAAT+AGG - chr1_1:58320742-58320761 None:intergenic 45.0%
GTTGAAACGTTGGCAAGTGA+AGG - chr1_1:58320859-58320878 None:intergenic 45.0%
! AGCGAGATAGAGAGCCTTTT+TGG - chr1_1:58312480-58312499 None:intergenic 45.0%
!!! ATTTTATTAAAAAAATATGA+AGG + chr1_1:58308070-58308089 Msa0031570:intron 5.0%
!!! TAATTTTTCTTTATAAATTA+TGG - chr1_1:58308376-58308395 None:intergenic 5.0%
!! ATAATTTATAAAGAAAAATT+AGG + chr1_1:58308375-58308394 Msa0031570:intron 5.0%
!!! ATTAATATATTTTTAAGTTT+AGG + chr1_1:58309836-58309855 Msa0031570:intron 5.0%
!!! ATAATTTAAAATAATTTCAA+TGG - chr1_1:58312169-58312188 None:intergenic 5.0%
!! ATAAAAAAAAAAAAAAAAAC+AGG + chr1_1:58313677-58313696 Msa0031570:intron 5.0%
!!! TTAAAAAATAACTTTTTTTT+AGG + chr1_1:58315029-58315048 Msa0031570:intron 5.0%
!!! TAAAAAATAACTTTTTTTTA+GGG + chr1_1:58315030-58315049 Msa0031570:intron 5.0%
ATCAGTCGGACGGCAATTAC+TGG - chr1_1:58307915-58307934 None:intergenic 50.0%
AGTAATTGCCGTCCGACTGA+TGG + chr1_1:58307914-58307933 Msa0031570:intron 50.0%
GTAATTGCCGTCCGACTGAT+GGG + chr1_1:58307915-58307934 Msa0031570:intron 50.0%
CCTATGATCTTGAGAGGAGG+CGG + chr1_1:58307953-58307972 Msa0031570:intron 50.0%
CTATGATCTTGAGAGGAGGC+GGG + chr1_1:58307954-58307973 Msa0031570:intron 50.0%
TATGATCTTGAGAGGAGGCG+GGG + chr1_1:58307955-58307974 Msa0031570:intron 50.0%
!! GACTGATACCGTTGGTGCTA+TGG - chr1_1:58308766-58308785 None:intergenic 50.0%
TTCGGTAGAAGGCTATGGTG+GGG - chr1_1:58308789-58308808 None:intergenic 50.0%
! AAAGAGGGAGAGAGGGTGTA+TGG - chr1_1:58309199-58309218 None:intergenic 50.0%
GACGAGAAAAAGAGGGAGAG+AGG - chr1_1:58309207-58309226 None:intergenic 50.0%
GGAGTTTGGAGGAGATGAGA+AGG + chr1_1:58309728-58309747 Msa0031570:intron 50.0%
TGAGAAGGGACGACTTAAGG+GGG + chr1_1:58309743-58309762 Msa0031570:intron 50.0%
GTTGACAATGTAGGTGGCGA+CGG - chr1_1:58310064-58310083 None:intergenic 50.0%
GGTTATGCTTAATGGGGGAG+TGG + chr1_1:58310921-58310940 Msa0031570:intron 50.0%
! TCACTAGCCTGATCCACACT+AGG - chr1_1:58310956-58310975 None:intergenic 50.0%
TGTGGATCAGGCTAGTGATG+TGG + chr1_1:58310958-58310977 Msa0031570:intron 50.0%
GTGGATCAGGCTAGTGATGT+GGG + chr1_1:58310959-58310978 Msa0031570:intron 50.0%
ATGTGGGTGTCTCTCACTTG+TGG + chr1_1:58310975-58310994 Msa0031570:intron 50.0%
TGTGGGTGTCTCTCACTTGT+GGG + chr1_1:58310976-58310995 Msa0031570:intron 50.0%
! CCCATATCGGCTAGAAATGG+AGG + chr1_1:58311034-58311053 Msa0031570:intron 50.0%
ACCACTTGTAGGGGATTCCA+GGG - chr1_1:58311172-58311191 None:intergenic 50.0%
TACCACTTGTAGGGGATTCC+AGG - chr1_1:58311173-58311192 None:intergenic 50.0%
TGTGTGGTGAGATGTGTCGA+TGG + chr1_1:58311394-58311413 Msa0031570:intron 50.0%
!! CAACTCGCATGTTGGCTTTC+CGG - chr1_1:58311431-58311450 None:intergenic 50.0%
!! GCTTGGTGTGGTGATGTAAG+GGG + chr1_1:58311679-58311698 Msa0031570:intron 50.0%
GTGTGGTTAAACTGGGGCAT+TGG + chr1_1:58311799-58311818 Msa0031570:intron 50.0%
!! TGGTTAAACTGGGGCATTGG+CGG + chr1_1:58311802-58311821 Msa0031570:intron 50.0%
!! GTTTGGAGGGAAGGAGTGTT+AGG - chr1_1:58311991-58312010 None:intergenic 50.0%
CTTCCTCACCAATGTCGATG+TGG - chr1_1:58312045-58312064 None:intergenic 50.0%
GGCACGACTCCAATTGATGT+TGG + chr1_1:58312330-58312349 Msa0031570:intron 50.0%
CGACTCCAATTGATGTTGGC+AGG + chr1_1:58312334-58312353 Msa0031570:intron 50.0%
! CAGCCGATTCTGATGATGTC+TGG + chr1_1:58312387-58312406 Msa0031570:intron 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr1_1:58313036-58313055 Msa0031570:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr1_1:58313037-58313056 Msa0031570:intron 50.0%
TGTGTTGGACAAGTTCCCAG+AGG + chr1_1:58314326-58314345 Msa0031570:intron 50.0%
TGTGGCTGCTTGGTATTCGT+TGG + chr1_1:58314367-58314386 Msa0031570:intron 50.0%
CAACGAATAAGTCCACGGGA+AGG - chr1_1:58314479-58314498 None:intergenic 50.0%
CTTCCCGTGGACTTATTCGT+TGG + chr1_1:58314477-58314496 Msa0031570:intron 50.0%
! TAGAAGCTGGTATCGGGTTC+TGG + chr1_1:58314575-58314594 Msa0031570:intron 50.0%
TCACTTCTCACACTAGGACG+CGG - chr1_1:58314631-58314650 None:intergenic 50.0%
CGTCCTAGTGTGAGAAGTGA+TGG + chr1_1:58314631-58314650 Msa0031570:intron 50.0%
CACCCATCACTTCTCACACT+AGG - chr1_1:58314637-58314656 None:intergenic 50.0%
! CTAGTGTGAGAAGTGATGGG+TGG + chr1_1:58314635-58314654 Msa0031570:intron 50.0%
!! TGTGAGAAGTGATGGGTGGT+TGG + chr1_1:58314639-58314658 Msa0031570:intron 50.0%
TGGGTGGTTGGAGATTGAGA+TGG + chr1_1:58314651-58314670 Msa0031570:intron 50.0%
GGGTGGTTGGAGATTGAGAT+GGG + chr1_1:58314652-58314671 Msa0031570:intron 50.0%
GAGTTTGAGGAATTGCCGGA+AGG + chr1_1:58315244-58315263 Msa0031570:five_prime_UTR 50.0%
CATTCTCTCTCGCACAACTC+CGG + chr1_1:58315279-58315298 Msa0031570:five_prime_UTR 50.0%
! CAGACTCTCCGTTGTTTCCA+AGG + chr1_1:58315312-58315331 Msa0031570:five_prime_UTR 50.0%
AGAAAGGGGGGAAGAGAGAA+GGG + chr1_1:58316417-58316436 Msa0031570:intron 50.0%
AGGGAGAAGAGAGAGAGAGA+AGG + chr1_1:58316460-58316479 Msa0031570:intron 50.0%
GGGAGAAGAGAGAGAGAGAA+GGG + chr1_1:58316461-58316480 Msa0031570:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG + chr1_1:58316563-58316582 Msa0031570:intron 50.0%
GAGAGAGAGACGAAGAGAGA+AGG + chr1_1:58316625-58316644 Msa0031570:intron 50.0%
AGAGAGGAGGGAGAAAAGAG+AGG + chr1_1:58316651-58316670 Msa0031570:intron 50.0%
! AAATCGAGGGCATAGCTACG+TGG - chr1_1:58317299-58317318 None:intergenic 50.0%
TTAGCCACCACTAAACGCCA+CGG - chr1_1:58317445-58317464 None:intergenic 50.0%
!! GATGTGCTATCGATGGTGGA+TGG - chr1_1:58317502-58317521 None:intergenic 50.0%
TGCCGAGTCCTTCATCAACA+AGG + chr1_1:58317910-58317929 Msa0031570:intron 50.0%
GCATAGGTCTTCAGCTGCAA+GGG - chr1_1:58318322-58318341 None:intergenic 50.0%
TGCATAGGTCTTCAGCTGCA+AGG - chr1_1:58318323-58318342 None:intergenic 50.0%
GACCTATGCAGTAGCTGACT+AGG + chr1_1:58318333-58318352 Msa0031570:intron 50.0%
TAGGCCACTTGCATAGACAC+TGG + chr1_1:58318352-58318371 Msa0031570:intron 50.0%
GTGTCCAGTGTCTATGCAAG+TGG - chr1_1:58318359-58318378 None:intergenic 50.0%
GTAAGATGCAGTGCATCTGC+GGG - chr1_1:58318389-58318408 None:intergenic 50.0%
GGTAAGATGCAGTGCATCTG+CGG - chr1_1:58318390-58318409 None:intergenic 50.0%
GTATCTGTCCTTAGCAGCTG+TGG + chr1_1:58318501-58318520 Msa0031570:intron 50.0%
TTCACTAGCCACAGCTGCTA+AGG - chr1_1:58318512-58318531 None:intergenic 50.0%
CAAGAAGCTCAGCGACTTCA+GGG - chr1_1:58318767-58318786 None:intergenic 50.0%
ACAAGAAGCTCAGCGACTTC+AGG - chr1_1:58318768-58318787 None:intergenic 50.0%
TGTTGCCCACCTTCCACATT+TGG - chr1_1:58318975-58318994 None:intergenic 50.0%
ACAGCGCAGTAGGATTGCAA+CGG + chr1_1:58318997-58319016 Msa0031570:five_prime_UTR 50.0%
! TTTTCACACACTGCGTGGCT+AGG - chr1_1:58319726-58319745 None:intergenic 50.0%
CAACGTGAGTTAACTCACGC+TGG - chr1_1:58319773-58319792 None:intergenic 50.0%
CAGCGTGAGTTAACTCACGT+TGG + chr1_1:58319771-58319790 Msa0031570:intron 50.0%
GCCGTGAGTTAACTCATGCA+GGG + chr1_1:58319837-58319856 Msa0031570:intron 50.0%
GCCCTGCATGAGTTAACTCA+CGG - chr1_1:58319841-58319860 None:intergenic 50.0%
CCAGACATCATCAGAATCGG+CGG - chr1_1:58312390-58312409 None:intergenic 50.0%
CAAGTGAAGGAGACTGTGAG+AGG - chr1_1:58320846-58320865 None:intergenic 50.0%
GTGGAATCCCATCAGTCGGA+CGG - chr1_1:58307925-58307944 None:intergenic 55.0%
CCGCCTCCTCTCAAGATCAT+AGG - chr1_1:58307956-58307975 None:intergenic 55.0%
TCGGTAGAAGGCTATGGTGG+GGG - chr1_1:58308788-58308807 None:intergenic 55.0%
AAGGGACGACTTAAGGGGGT+GGG + chr1_1:58309747-58309766 Msa0031570:intron 55.0%
GTGGGTGTCTCTCACTTGTG+GGG + chr1_1:58310977-58310996 Msa0031570:intron 55.0%
TGGGTGTCTCTCACTTGTGG+GGG + chr1_1:58310978-58310997 Msa0031570:intron 55.0%
TCCCTGGAATCCCCTACAAG+TGG + chr1_1:58311168-58311187 Msa0031570:intron 55.0%
AGAGCCATTGTTAGGCTCGG+TGG + chr1_1:58311195-58311214 Msa0031570:intron 55.0%
! GAGCCATTGTTAGGCTCGGT+GGG + chr1_1:58311196-58311215 Msa0031570:intron 55.0%
!! AGCCATTGTTAGGCTCGGTG+GGG + chr1_1:58311197-58311216 Msa0031570:intron 55.0%
! TGGTGAGATGTGTCGATGGC+TGG + chr1_1:58311398-58311417 Msa0031570:intron 55.0%
GTCGATGGCTGGAGAACTTC+CGG + chr1_1:58311409-58311428 Msa0031570:intron 55.0%
GAAGTCCCACATCGCTTGCT+TGG + chr1_1:58311662-58311681 Msa0031570:intron 55.0%
CCACACCAAGCAAGCGATGT+GGG - chr1_1:58311670-58311689 None:intergenic 55.0%
ACCACACCAAGCAAGCGATG+TGG - chr1_1:58311671-58311690 None:intergenic 55.0%
CGACCACATCGACATTGGTG+AGG + chr1_1:58312039-58312058 Msa0031570:intron 55.0%
! AGTCGTGCCAGAGAGTATGG+TGG - chr1_1:58312319-58312338 None:intergenic 55.0%
TGGAGTCGTGCCAGAGAGTA+TGG - chr1_1:58312322-58312341 None:intergenic 55.0%
CAACTTTACCAGCTGCGCCA+AGG - chr1_1:58313014-58313033 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_1:58313049-58313068 Msa0031570:intron 55.0%
CTTCGTCTTGTGTGGCTGCT+TGG + chr1_1:58314357-58314376 Msa0031570:intron 55.0%
GGGAAGGATCCTACGTCCAT+AGG - chr1_1:58314463-58314482 None:intergenic 55.0%
GGAAACAACGGAGAGTCTGC+CGG - chr1_1:58315311-58315330 None:intergenic 55.0%
! ATTCCAGACGGCGTCGGAAT+CGG - chr1_1:58315353-58315372 None:intergenic 55.0%
!! GTAGGAGCGTTGGCAAGTGA+AGG - chr1_1:58315427-58315446 None:intergenic 55.0%
GGGGTGATGATCGACGCTAT+TGG + chr1_1:58315683-58315702 Msa0031570:five_prime_UTR 55.0%
GAGAAAGGGGGGAAGAGAGA+AGG + chr1_1:58316416-58316435 Msa0031570:intron 55.0%
CGAAGAGAGAAGGGAGAGAG+AGG + chr1_1:58316635-58316654 Msa0031570:intron 55.0%
AGAGAGAAGGGAGAGAGAGG+AGG + chr1_1:58316638-58316657 Msa0031570:intron 55.0%
GAGAGAAGGGAGAGAGAGGA+GGG + chr1_1:58316639-58316658 Msa0031570:intron 55.0%
CGTTCAGTCAAACCGGTGCT+TGG + chr1_1:58317338-58317357 Msa0031570:intron 55.0%
GGTCTTCAGCTGCAAGGGTA+AGG - chr1_1:58318317-58318336 None:intergenic 55.0%
GGCCTAGTCAGCTACTGCAT+AGG - chr1_1:58318338-58318357 None:intergenic 55.0%
GGGCAACATAACAGCGCAGT+AGG + chr1_1:58318987-58319006 Msa0031570:five_prime_UTR 55.0%
GGCCTAGTGTGAGAAGCGAT+GGG + chr1_1:58319018-58319037 Msa0031570:five_prime_UTR 55.0%
CACCCATCGCTTCTCACACT+AGG - chr1_1:58319023-58319042 None:intergenic 55.0%
CTAGTGTGAGAAGCGATGGG+TGG + chr1_1:58319021-58319040 Msa0031570:five_prime_UTR 55.0%
TGTGAGAAGCGATGGGTGGT+TGG + chr1_1:58319025-58319044 Msa0031570:five_prime_UTR 55.0%
! CAGCGTTTTCACACACTGCG+TGG - chr1_1:58319731-58319750 None:intergenic 55.0%
CACGCAGTGTGTGAAAACGC+TGG + chr1_1:58319729-58319748 Msa0031570:intron 55.0%
GGCCGTGAGTTAACTCATGC+AGG + chr1_1:58319836-58319855 Msa0031570:intron 55.0%
CTACTAGTCAGGACAGCAGG+TGG + chr1_1:58320321-58320340 Msa0031570:intron 55.0%
! AGTCGTGCGAGAGAGTATGG+TGG - chr1_1:58320719-58320738 None:intergenic 55.0%
AGGAGTCGTGCGAGAGAGTA+TGG - chr1_1:58320722-58320741 None:intergenic 55.0%
CGCACGACTCCTATTGACGT+TGG + chr1_1:58320730-58320749 Msa0031570:CDS 55.0%
!! CCGCCGATTCTGATGATGTC+TGG + chr1_1:58320788-58320807 Msa0031570:CDS 55.0%
TGGTGGGGGACTGATACCGT+TGG - chr1_1:58308774-58308793 None:intergenic 60.0%
! GAGGGAGAGAGGGTGTATGG+AGG - chr1_1:58309196-58309215 None:intergenic 60.0%
GAAGGGACGACTTAAGGGGG+TGG + chr1_1:58309746-58309765 Msa0031570:intron 60.0%
GCTTAATGGGGGAGTGGGAG+CGG + chr1_1:58310927-58310946 Msa0031570:intron 60.0%
CTTAATGGGGGAGTGGGAGC+GGG + chr1_1:58310928-58310947 Msa0031570:intron 60.0%
GCGGGATCCTAGTGTGGATC+AGG + chr1_1:58310946-58310965 Msa0031570:intron 60.0%
!! GCCATTGTTAGGCTCGGTGG+GGG + chr1_1:58311198-58311217 Msa0031570:intron 60.0%
TCCCCCACCGAGCCTAACAA+TGG - chr1_1:58311202-58311221 None:intergenic 60.0%
GCGGGATTGGGATCCTAGTG+TGG + chr1_1:58311222-58311241 Msa0031570:intron 60.0%
! CCCACATCGCTTGCTTGGTG+TGG + chr1_1:58311667-58311686 Msa0031570:intron 60.0%
! TAAGTGGTGGGACCCCTTCC+CGG + chr1_1:58313119-58313138 Msa0031570:intron 60.0%
CTAAAGCCCCCGCATACGCA+GGG - chr1_1:58313146-58313165 None:intergenic 60.0%
ACTAAAGCCCCCGCATACGC+AGG - chr1_1:58313147-58313166 None:intergenic 60.0%
! ATGCGGGGGCTTTAGTGCAC+CGG + chr1_1:58313151-58313170 Msa0031570:intron 60.0%
TGGACGTAGGATCCTTCCCG+TGG + chr1_1:58314464-58314483 Msa0031570:intron 60.0%
! GTTGGCATCGAAGGTGGCCT+TGG + chr1_1:58314495-58314514 Msa0031570:intron 60.0%
GGCGGCAGAAAGGAAAGCCT+TGG - chr1_1:58315332-58315351 None:intergenic 60.0%
! TATTGGCTATGGTGGCGCCG+TGG + chr1_1:58317425-58317444 Msa0031570:intron 60.0%
!! CGATGGTGGATGGCAGACCA+CGG - chr1_1:58317492-58317511 None:intergenic 60.0%
CGGCCTAGTGTGAGAAGCGA+TGG + chr1_1:58319017-58319036 Msa0031570:five_prime_UTR 60.0%
AGGACAGCAGGTGGTCGTTG+AGG + chr1_1:58320330-58320349 Msa0031570:intron 60.0%
GTAGGTGGCGACGGACACGA+CGG - chr1_1:58310055-58310074 None:intergenic 65.0%
GTGGGAGCGGGATCCTAGTG+TGG + chr1_1:58310940-58310959 Msa0031570:intron 65.0%
!! TGTTAGGCTCGGTGGGGGAG+CGG + chr1_1:58311203-58311222 Msa0031570:intron 65.0%
AGGGGTAACCTTGGCGCAGC+TGG + chr1_1:58313003-58313022 Msa0031570:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_1:58313134-58313153 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_1:58313135-58313154 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr1_1:58313134-58313153 Msa0031570:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr1_1:58313135-58313154 Msa0031570:intron 65.0%
! TGCGGGGGCTTTAGTGCACC+GGG + chr1_1:58313152-58313171 Msa0031570:intron 65.0%
CGTCGGAATCGGCGGCAGAA+AGG - chr1_1:58315342-58315361 None:intergenic 65.0%
GTGGCGACGGACACGACGGT+CGG - chr1_1:58310051-58310070 None:intergenic 70.0%
!! GTTAGGCTCGGTGGGGGAGC+GGG + chr1_1:58311204-58311223 Msa0031570:intron 70.0%
CTCGGTGGGGGAGCGGGATT+GGG + chr1_1:58311210-58311229 Msa0031570:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr1_1:58313136-58313155 None:intergenic 70.0%
TCCCGGACCCTGCGTATGCG+GGG + chr1_1:58313136-58313155 Msa0031570:intron 70.0%
CGCACAACTCCGGCTGACGC+CGG + chr1_1:58315289-58315308 Msa0031570:five_prime_UTR 70.0%
GAGAGTCTGCCGGCGTCAGC+CGG - chr1_1:58315301-58315320 None:intergenic 70.0%
! CCAGACGGCGTCGGAATCGG+CGG - chr1_1:58315350-58315369 None:intergenic 70.0%
GGTGGCGCCGTGGCGTTTAG+TGG + chr1_1:58317435-58317454 Msa0031570:intron 70.0%
GGCGCCGTGGCGTTTAGTGG+TGG + chr1_1:58317438-58317457 Msa0031570:intron 70.0%
! GCTCGGTGGGGGAGCGGGAT+TGG + chr1_1:58311209-58311228 Msa0031570:intron 75.0%
CCCCCGCATACGCAGGGTCC+GGG - chr1_1:58313140-58313159 None:intergenic 75.0%
CCCGGACCCTGCGTATGCGG+GGG + chr1_1:58313137-58313156 Msa0031570:intron 75.0%
GCCCCCGCATACGCAGGGTC+CGG - chr1_1:58313141-58313160 None:intergenic 75.0%
!! CCGCCGATTCCGACGCCGTC+TGG + chr1_1:58315347-58315366 Msa0031570:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 58307755 58320957 58307755 ID=Msa0031570;Name=Msa0031570
chr1_1 mRNA 58307755 58320957 58307755 ID=Msa0031570-mRNA-1;Parent=Msa0031570;Name=Msa0031570-mRNA-1;_AED=0.40;_eAED=0.40;_QI=1149|0.75|0.6|1|0.5|0.2|5|0|139
chr1_1 exon 58307755 58307790 58307755 ID=Msa0031570-mRNA-1:exon:17796;Parent=Msa0031570-mRNA-1
chr1_1 exon 58315191 58315507 58315191 ID=Msa0031570-mRNA-1:exon:17797;Parent=Msa0031570-mRNA-1
chr1_1 exon 58315613 58315731 58315613 ID=Msa0031570-mRNA-1:exon:17798;Parent=Msa0031570-mRNA-1
chr1_1 exon 58318761 58319519 58318761 ID=Msa0031570-mRNA-1:exon:17799;Parent=Msa0031570-mRNA-1
chr1_1 exon 58320620 58320957 58320620 ID=Msa0031570-mRNA-1:exon:17800;Parent=Msa0031570-mRNA-1
chr1_1 five_prime_UTR 58307755 58307790 58307755 ID=Msa0031570-mRNA-1:five_prime_utr;Parent=Msa0031570-mRNA-1
chr1_1 five_prime_UTR 58315191 58315507 58315191 ID=Msa0031570-mRNA-1:five_prime_utr;Parent=Msa0031570-mRNA-1
chr1_1 five_prime_UTR 58315613 58315731 58315613 ID=Msa0031570-mRNA-1:five_prime_utr;Parent=Msa0031570-mRNA-1
chr1_1 five_prime_UTR 58318761 58319437 58318761 ID=Msa0031570-mRNA-1:five_prime_utr;Parent=Msa0031570-mRNA-1
chr1_1 CDS 58319438 58319519 58319438 ID=Msa0031570-mRNA-1:cds;Parent=Msa0031570-mRNA-1
chr1_1 CDS 58320620 58320957 58320620 ID=Msa0031570-mRNA-1:cds;Parent=Msa0031570-mRNA-1
Gene Sequence

>Msa0031570

ATGAATTTGCTGCCATTTATTGATTTGGAACCCTCAACTATGAACGTTGGGGATGGAATTTATTCCAGTGATTTAAATTTTGATTGCATTTGGGATATCTATCATTTGTGTATATTGAATGTCACCAGAAAGAACAAAAGAATGACAAGTTTTGAAGAATTGCCTGAAGAGTGTATTGCCACCATACTCTCTCGCACGACTCCTATTGACGTTGGCAGATTCTCCGTCCTTTCTAAGACTTTTCGATCTGCCGCCGATTCTGATGATGTCTGGAATTGTTTTCTTCCTTCTGACATATCATCTATCCTCTCACAGTCTCCTTCACTTGCCAACGTTTCAACCAAAAAGGCTCTCTATCTCGCTCTCTCTGATCATCCTATCATCATCGATCATGGTCAAAAGGTATATTATTCTTCATAA
Protein sequence

>Msa0031570

MNLLPFIDLEPSTMNVGDGIYSSDLNFDCIWDIYHLCILNVTRKNKRMTSFEELPEECIATILSRTTPIDVGRFSVLSKTFRSAADSDDVWNCFLPSDISSILSQSPSLANVSTKKALYLALSDHPIIIDHGQKVYYSS*